AlfalfaGEDB | Msa0091360

M. sativa cultivar zhongmu-4 / Msa0091360

KEGG: K18636
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0091360	sp\|Q84M91\|TANB_ARATH	49.602	377	128	10	1	321	1	371	2.77e-99	303

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0091360	A0A2K3NH04	85.588	340	45	2	1	336	1	340	0.0	558

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0015570	Msa0091360	0.806058	9.888869e-50	-8.615850e-47
Msa0016040	Msa0091360	0.853356	2.522229e-61	-8.615850e-47
Msa0019930	Msa0091360	0.822704	2.054310e-53	-8.615850e-47
Msa0020540	Msa0091360	0.820123	8.099081e-53	-8.615850e-47
Msa0025580	Msa0091360	0.827833	1.257195e-54	-8.615850e-47
Msa0027280	Msa0091360	0.843242	1.580377e-58	-8.615850e-47
Msa0029960	Msa0091360	0.819514	1.115997e-52	-8.615850e-47
Msa0032970	Msa0091360	0.839039	2.010905e-57	-8.615850e-47
Msa0032980	Msa0091360	0.814846	1.251341e-51	-8.615850e-47
Msa0035140	Msa0091360	0.851188	1.044051e-60	-8.615850e-47
Msa0056180	Msa0091360	0.804704	1.901155e-49	-8.615850e-47
Msa0062340	Msa0091360	0.805872	1.082356e-49	-8.615850e-47
Msa0067060	Msa0091360	0.839831	1.252095e-57	-8.615850e-47
Msa0068150	Msa0091360	0.848300	6.693410e-60	-8.615850e-47
Msa0073120	Msa0091360	0.805392	1.364600e-49	-8.615850e-47
Msa0075530	Msa0091360	0.802755	4.825308e-49	-8.615850e-47
Msa0091350	Msa0091360	0.822397	2.421687e-53	-8.615850e-47
Msa0091360	Msa0112670	0.816025	6.840941e-52	-8.615850e-47
Msa0091360	Msa0115550	0.812427	4.263984e-51	-8.615850e-47
Msa0091360	Msa0121330	0.844334	8.063147e-59	-8.615850e-47
Msa0091360	Msa0122330	0.814373	1.592663e-51	-8.615850e-47
Msa0091360	Msa0123070	0.807174	5.750506e-50	-8.615850e-47
Msa0091360	Msa0140200	0.829548	4.840963e-55	-8.615850e-47
Msa0091360	Msa0140380	0.861071	1.327211e-63	-8.615850e-47
Msa0091360	Msa0141640	0.833016	6.791932e-56	-8.615850e-47
Msa0091360	Msa0156050	0.826344	2.856889e-54	-8.615850e-47
Msa0091360	Msa0156090	0.817733	2.829374e-52	-8.615850e-47
Msa0091360	Msa0159590	0.848976	4.347487e-60	-8.615850e-47
Msa0091360	Msa0159620	0.808467	3.053693e-50	-8.615850e-47
Msa0091360	Msa0165830	0.812902	3.355222e-51	-8.615850e-47
Msa0091360	Msa0166170	0.814507	1.487188e-51	-8.615850e-47
Msa0091360	Msa0170070	0.803376	3.591041e-49	-8.615850e-47
Msa0091360	Msa0174440	0.802349	5.852497e-49	-8.615850e-47
Msa0091360	Msa0190570	0.817430	3.310471e-52	-8.615850e-47
Msa0091360	Msa0200050	0.837713	4.419448e-57	-8.615850e-47
Msa0091360	Msa0213030	0.830144	3.465137e-55	-8.615850e-47
Msa0091360	Msa0232760	0.858250	9.372411e-63	-8.615850e-47
Msa0091360	Msa0337480	0.807722	4.399304e-50	-8.615850e-47
Msa0091360	Msa0367150	0.813175	2.924313e-51	-8.615850e-47
Msa0091360	Msa0368860	0.811339	7.354978e-51	-8.615850e-47
Msa0091360	Msa0373170	0.801999	6.908038e-49	-8.615850e-47
Msa0091360	Msa0373500	0.819375	1.200530e-52	-8.615850e-47
Msa0091360	Msa0381730	0.811298	7.509957e-51	-8.615850e-47
Msa0091360	Msa0382740	0.803868	2.838217e-49	-8.615850e-47
Msa0091360	Msa0382770	0.803950	2.729784e-49	-8.615850e-47
Msa0091360	Msa0383000	0.853051	3.085325e-61	-8.615850e-47
Msa0091360	Msa0389950	0.816778	4.641006e-52	-8.615850e-47
Msa0091360	Msa0400950	0.824712	6.958096e-54	-8.615850e-47
Msa0091360	Msa0405620	0.822785	1.967139e-53	-8.615850e-47
Msa0091360	Msa0412130	0.800883	1.169183e-48	-8.615850e-47
Msa0091360	Msa0415140	0.808600	2.859793e-50	-8.615850e-47
Msa0091360	Msa0416160	0.819496	1.126540e-52	-8.615850e-47
Msa0091360	Msa0421150	0.813579	2.383277e-51	-8.615850e-47
Msa0091360	Msa0422050	0.826510	2.607740e-54	-8.615850e-47
Msa0091360	Msa0432010	0.815822	7.591971e-52	-8.615850e-47
Msa0091360	Msa0433150	0.866148	3.523143e-65	-8.615850e-47
Msa0091360	Msa0433760	0.808680	2.749133e-50	-8.615850e-47
Msa0091360	Msa0447750	0.830156	3.442181e-55	-8.615850e-47
Msa0091360	Msa0462780	0.814441	1.538380e-51	-8.615850e-47
Msa0091360	Msa0466520	0.818193	2.227271e-52	-8.615850e-47
Msa0091360	Msa0467690	0.805304	1.424244e-49	-8.615850e-47
Msa0091360	Msa0477630	0.804958	1.682153e-49	-8.615850e-47
Msa0091360	Msa0495550	0.811180	7.965988e-51	-8.615850e-47
Msa0091360	Msa0503990	0.802400	5.711852e-49	-8.615850e-47
Msa0091360	Msa0507920	0.814136	1.796423e-51	-8.615850e-47
Msa0091360	Msa0513080	0.846163	2.580491e-59	-8.615850e-47
Msa0091360	Msa0513560	0.813133	2.986832e-51	-8.615850e-47
Msa0091360	Msa0520870	0.836814	7.503179e-57	-8.615850e-47
Msa0091360	Msa0521680	0.826428	2.727786e-54	-8.615850e-47
Msa0091360	Msa0524520	0.854631	1.082128e-61	-8.615850e-47
Msa0091360	Msa0525000	0.804424	2.174608e-49	-8.615850e-47
Msa0091360	Msa0531960	0.852162	5.532190e-61	-8.615850e-47
Msa0091360	Msa0534100	0.805143	1.538720e-49	-8.615850e-47
Msa0091360	Msa0554300	0.822091	2.851897e-53	-8.615850e-47
Msa0091360	Msa0561560	0.844576	6.941091e-59	-8.615850e-47
Msa0091360	Msa0563740	0.827487	1.522919e-54	-8.615850e-47
Msa0091360	Msa0563900	0.802687	4.983458e-49	-8.615850e-47
Msa0091360	Msa0563940	0.802569	5.271019e-49	-8.615850e-47
Msa0091360	Msa0563980	0.833603	4.851549e-56	-8.615850e-47
Msa0091360	Msa0567170	0.803013	4.268499e-49	-8.615850e-47
Msa0091360	Msa0571620	0.800290	1.544739e-48	-8.615850e-47
Msa0091360	Msa0577280	0.830639	2.622384e-55	-8.615850e-47
Msa0091360	Msa0577330	0.832375	9.798373e-56	-8.615850e-47
Msa0091360	Msa0580200	0.826812	2.208655e-54	-8.615850e-47
Msa0091360	Msa0588920	0.815672	8.199270e-52	-8.615850e-47
Msa0091360	Msa0590200	0.820366	7.126098e-53	-8.615850e-47
Msa0091360	Msa0603980	0.821707	3.499167e-53	-8.615850e-47
Msa0091360	Msa0606100	0.861140	1.264715e-63	-8.615850e-47
Msa0091360	Msa0608350	0.817427	3.315685e-52	-8.615850e-47
Msa0091360	Msa0612520	0.813688	2.254783e-51	-8.615850e-47
Msa0091360	Msa0613630	0.807684	4.482246e-50	-8.615850e-47
Msa0091360	Msa0615630	0.803946	2.734654e-49	-8.615850e-47
Msa0091360	Msa0620500	0.809340	1.986080e-50	-8.615850e-47
Msa0091360	Msa0621710	0.871341	7.357855e-67	-8.615850e-47
Msa0091360	Msa0622920	0.829762	4.292518e-55	-8.615850e-47
Msa0091360	Msa0625620	0.818691	1.717775e-52	-8.615850e-47
Msa0091360	Msa0630660	0.809197	2.130856e-50	-8.615850e-47
Msa0091360	Msa0647050	0.822699	2.059681e-53	-8.615850e-47
Msa0091360	Msa0648760	0.817196	3.737453e-52	-8.615850e-47
Msa0091360	Msa0657700	0.814325	1.632212e-51	-8.615850e-47
Msa0091360	Msa0659150	0.826991	2.002227e-54	-8.615850e-47
Msa0091360	Msa0666700	0.855444	6.284199e-62	-8.615850e-47
Msa0091360	Msa0668900	0.850480	1.652880e-60	-8.615850e-47
Msa0091360	Msa0690320	0.806365	8.524594e-50	-8.615850e-47
Msa0091360	Msa0691270	0.826596	2.487290e-54	-8.615850e-47
Msa0091360	Msa0698730	0.852195	5.412766e-61	-8.615850e-47
Msa0091360	Msa0702810	0.802439	5.606231e-49	-8.615850e-47
Msa0091360	Msa0713960	0.823179	1.591756e-53	-8.615850e-47
Msa0091360	Msa0717900	0.828758	7.523101e-55	-8.615850e-47
Msa0091360	Msa0718040	0.807971	3.894036e-50	-8.615850e-47
Msa0091360	Msa0722220	0.813042	3.126366e-51	-8.615850e-47
Msa0091360	Msa0735780	0.831491	1.619856e-55	-8.615850e-47
Msa0091360	Msa0740710	0.824208	9.139726e-54	-8.615850e-47
Msa0091360	Msa0743440	0.809422	1.906765e-50	-8.615850e-47
Msa0091360	Msa0747740	0.818982	1.475256e-52	-8.615850e-47
Msa0091360	Msa0758650	0.813827	2.101338e-51	-8.615850e-47
Msa0091360	Msa0761670	0.850052	2.178379e-60	-8.615850e-47
Msa0091360	Msa0773630	0.825369	4.867440e-54	-8.615850e-47
Msa0091360	Msa0773650	0.813064	3.092456e-51	-8.615850e-47
Msa0091360	Msa0780910	0.818218	2.198456e-52	-8.615850e-47
Msa0091360	Msa0791730	0.808917	2.446244e-50	-8.615850e-47
Msa0091360	Msa0800660	0.813657	2.290432e-51	-8.615850e-47
Msa0091360	Msa0805680	0.803884	2.816870e-49	-8.615850e-47
Msa0091360	Msa0811020	0.841860	3.677857e-58	-8.615850e-47
Msa0091360	Msa0816080	0.816405	5.625518e-52	-8.615850e-47
Msa0091360	Msa0821160	0.835421	1.695173e-56	-8.615850e-47
Msa0091360	Msa0828970	0.805413	1.351043e-49	-8.615850e-47
Msa0091360	Msa0835350	0.839516	1.512414e-57	-8.615850e-47
Msa0091360	Msa0843050	0.804623	1.976769e-49	-8.615850e-47
Msa0091360	Msa0863620	0.825755	3.943070e-54	-8.615850e-47
Msa0091360	Msa0888790	0.812713	3.690967e-51	-8.615850e-47
Msa0091360	Msa0900760	0.824346	8.482464e-54	-8.615850e-47
Msa0091360	Msa0909760	0.835123	2.015714e-56	-8.615850e-47
Msa0091360	Msa0915520	0.812012	5.252028e-51	-8.615850e-47
Msa0091360	Msa0931590	0.863720	2.035359e-64	-8.615850e-47
Msa0091360	Msa0960770	0.813146	2.966913e-51	-8.615850e-47
Msa0091360	Msa0966320	0.823801	1.138721e-53	-8.615850e-47
Msa0091360	Msa0989370	0.805582	1.245198e-49	-8.615850e-47
Msa0091360	Msa1029530	0.802530	5.370126e-49	-8.615850e-47
Msa0091360	Msa1033920	0.812834	3.473606e-51	-8.615850e-47
Msa0091360	Msa1035220	0.824437	8.075304e-54	-8.615850e-47
Msa0091360	Msa1035570	0.824433	8.093845e-54	-8.615850e-47
Msa0091360	Msa1035610	0.816507	5.337960e-52	-8.615850e-47
Msa0091360	Msa1035650	0.828741	7.594966e-55	-8.615850e-47
Msa0091360	Msa1060900	0.819313	1.239979e-52	-8.615850e-47
Msa0091360	Msa1076020	0.800294	1.541637e-48	-8.615850e-47
Msa0091360	Msa1078880	0.832077	1.161283e-55	-8.615850e-47
Msa0091360	Msa1078970	0.838839	2.265290e-57	-8.615850e-47
Msa0091360	Msa1079640	0.808315	3.289398e-50	-8.615850e-47
Msa0091360	Msa1081390	0.815217	1.034931e-51	-8.615850e-47
Msa0091360	Msa1082200	0.827761	1.308360e-54	-8.615850e-47
Msa0091360	Msa1082380	0.832158	1.109069e-55	-8.615850e-47
Msa0091360	Msa1084530	0.808995	2.354510e-50	-8.615850e-47
Msa0091360	Msa1090140	0.813510	2.468003e-51	-8.615850e-47
Msa0091360	Msa1114630	0.807675	4.501632e-50	-8.615850e-47
Msa0091360	Msa1116190	0.841204	5.475934e-58	-8.615850e-47
Msa0091360	Msa1116220	0.823424	1.395621e-53	-8.615850e-47
Msa0091360	Msa1116660	0.860807	1.596695e-63	-8.615850e-47
Msa0091360	Msa1116740	0.866763	2.246984e-65	-8.615850e-47
Msa0091360	Msa1124470	0.826911	2.092321e-54	-8.615850e-47
Msa0091360	Msa1125820	0.805756	1.145021e-49	-8.615850e-47
Msa0091360	Msa1125990	0.805922	1.056530e-49	-8.615850e-47
Msa0091360	Msa1127280	0.821461	3.989405e-53	-8.615850e-47
Msa0091360	Msa1130420	0.804113	2.523884e-49	-8.615850e-47
Msa0091360	Msa1132530	0.803664	3.129978e-49	-8.615850e-47
Msa0091360	Msa1139050	0.834502	2.889016e-56	-8.615850e-47
Msa0091360	Msa1148630	0.811813	5.801167e-51	-8.615850e-47
Msa0091360	Msa1149450	0.819226	1.298220e-52	-8.615850e-47
Msa0091360	Msa1159590	0.810692	1.015622e-50	-8.615850e-47
Msa0091360	Msa1162880	0.856588	2.906367e-62	-8.615850e-47
Msa0091360	Msa1165480	0.831770	1.382372e-55	-8.615850e-47
Msa0091360	Msa1169190	0.826370	2.816273e-54	-8.615850e-47
Msa0091360	Msa1190390	0.804943	1.694861e-49	-8.615850e-47
Msa0091360	Msa1214350	0.837316	5.587038e-57	-8.615850e-47
Msa0091360	Msa1215980	0.809948	1.470387e-50	-8.615850e-47
Msa0091360	Msa1220170	0.815852	7.476860e-52	-8.615850e-47
Msa0091360	Msa1244240	0.837466	5.112217e-57	-8.615850e-47
Msa0091360	Msa1254420	0.826575	2.516737e-54	-8.615850e-47
Msa0091360	Msa1254540	0.868948	4.466428e-66	-8.615850e-47
Msa0091360	Msa1261050	0.805954	1.040067e-49	-8.615850e-47
Msa0091360	Msa1263740	0.817350	3.452173e-52	-8.615850e-47
Msa0091360	Msa1263780	0.850909	1.251948e-60	-8.615850e-47
Msa0091360	Msa1266690	0.801441	8.990730e-49	-8.615850e-47
Msa0091360	Msa1268630	0.821067	4.915788e-53	-8.615850e-47
Msa0091360	Msa1294460	0.812729	3.661682e-51	-8.615850e-47
Msa0091360	Msa1300460	0.821098	4.836926e-53	-8.615850e-47
Msa0091360	Msa1306790	0.801784	7.645691e-49	-8.615850e-47
Msa0091360	Msa1332950	0.806516	7.919396e-50	-8.615850e-47
Msa0091360	Msa1338210	0.834526	2.848141e-56	-8.615850e-47
Msa0091360	Msa1339170	0.819667	1.029825e-52	-8.615850e-47
Msa0091360	Msa1342810	0.802799	4.727221e-49	-8.615850e-47
Msa0091360	Msa1343170	0.831262	1.844658e-55	-8.615850e-47
Msa0091360	Msa1343180	0.829741	4.343542e-55	-8.615850e-47
Msa0091360	Msa1361930	0.817286	3.567289e-52	-8.615850e-47
Msa0091360	Msa1364410	0.860008	2.785476e-63	-8.615850e-47
Msa0091360	Msa1368750	0.815755	7.857950e-52	-8.615850e-47
Msa0091360	Msa1374790	0.819816	9.519891e-53	-8.615850e-47
Msa0091360	Msa1380120	0.807398	5.155318e-50	-8.615850e-47
Msa0091360	Msa1381470	0.808567	2.906465e-50	-8.615850e-47
Msa0091360	Msa1383310	0.801511	8.698642e-49	-8.615850e-47
Msa0091360	Msa1387440	0.801562	8.492898e-49	-8.615850e-47
Msa0091360	Msa1387500	0.805750	1.147809e-49	-8.615850e-47
Msa0091360	Msa1400010	0.840087	1.073631e-57	-8.615850e-47
Msa0091360	Msa1406720	0.826626	2.446708e-54	-8.615850e-47
Msa0091360	Msa1409410	0.820304	7.361195e-53	-8.615850e-47
Msa0091360	Msa1426110	0.822510	2.279726e-53	-8.615850e-47
Msa0091360	Msa1434640	0.800237	1.583438e-48	-8.615850e-47
Msa0091360	Msa1437930	0.810548	1.091452e-50	-8.615850e-47
Msa0091360	Msa1446100	0.816073	6.673870e-52	-8.615850e-47
Msa0091360	Msa1447170	0.835830	1.334974e-56	-8.615850e-47
Msa0091360	Msa1450190	0.862864	3.745840e-64	-8.615850e-47
Msa0091360	Msa1451820	0.817886	2.612794e-52	-8.615850e-47
Msa0091360	Msa1454010	0.826820	2.199546e-54	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0091360	MtrunA17_Chr7g0272861	56.744	430	98	12	1	351	1	421	4.84e-142	409
Msa0091360	MtrunA17_Chr1g0191861	98.551	69	1	0	28	96	9	77	2.18e-42	142
Msa0091360	MtrunA17_Chr1g0191871	95.455	66	3	0	101	166	1	66	8.12e-37	127

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0091360	AT3G05330.1	49.602	377	128	10	1	321	1	371	2.81e-100	303

Find 90 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCTTCTAGTAGAAGAATTTA+AGG	0.103612	1_2:+73503729	Msa0091360:CDS
CTATCAAATTCTTTAACTTT+TGG	0.200274	1_2:-73503252	None:intergenic
CCAGGTTAGTTTCACCATTA+AGG	0.232654	1_2:+73503631	Msa0091360:CDS
CCTCTATTTCTTGAAATAAT+AGG	0.242411	1_2:-73503429	None:intergenic
ACCAAAAGCAAAACAGGTTT+GGG	0.298728	1_2:+73501959	Msa0091360:five_prime_UTR
AGAAACCTTAAAAGTGATTC+TGG	0.299979	1_2:-73503226	None:intergenic
CCTTAAATTCTTCTACTAGA+AGG	0.318957	1_2:-73503729	None:intergenic
GGGAATTGAACTGTTGATAC+TGG	0.334992	1_2:-73503708	None:intergenic
GTTTCTCCTACAAGCATTGC+AGG	0.339255	1_2:-73502988	None:intergenic
AACCAAAAGCAAAACAGGTT+TGG	0.361926	1_2:+73501958	Msa0091360:five_prime_UTR
AGTATTTGTCTTCGGCGAAT+AGG	0.362928	1_2:+73503286	Msa0091360:CDS
GTATTTGTCTTCGGCGAATA+GGG	0.372487	1_2:+73503287	Msa0091360:CDS
CATTGAGTTGACTTGAACAA+AGG	0.398174	1_2:-73503360	None:intergenic
GGTGGAAACAAGGTTGTGTC+AGG	0.399457	1_2:+73502282	Msa0091360:CDS
GCTAAAGTTCTCTTAAGCTT+TGG	0.399461	1_2:-73502069	None:intergenic
CTCAAACTTGCAAGTCTTGT+GGG	0.400052	1_2:-73503540	None:intergenic
TTAGCCCATGGCCTATTCCT+TGG	0.403064	1_2:-73503315	None:intergenic
TTGTTGCCTGCAATGCTTGT+AGG	0.403282	1_2:+73502982	Msa0091360:CDS
TCTGAAACCAAAAGCAAAAC+AGG	0.416963	1_2:+73501953	Msa0091360:five_prime_UTR
TTGCTTGGCCTTTGAGACAT+TGG	0.421229	1_2:-73503102	None:intergenic
GAACTTCAGAACACTGCAAC+TGG	0.423038	1_2:+73502261	Msa0091360:CDS
GTTGACTTGAACAAAGGGTT+GGG	0.423813	1_2:-73503354	None:intergenic
AGTGTTTCTCTAATGAGAAC+AGG	0.433239	1_2:-73502102	None:intergenic
CTTATATTTATACAGGTGAA+TGG	0.441165	1_2:+73502950	Msa0091360:intron
ACACACAACTTAAGTCTAGA+AGG	0.442768	1_2:+73503142	Msa0091360:CDS
AGAGAAATTGTTTCAGCAGT+TGG	0.447693	1_2:+73503045	Msa0091360:CDS
ATAGGGTATCTCCAAGGAAT+AGG	0.448663	1_2:+73503304	Msa0091360:CDS
AAGTTCTCTTAAGCTTTGGT+GGG	0.451535	1_2:-73502065	None:intergenic
CTCCTTCGAGACTAGCTACC+AGG	0.453794	1_2:+73503613	Msa0091360:CDS
GCTCAAACTTGCAAGTCTTG+TGG	0.454422	1_2:-73503541	None:intergenic
TCAGACCCACCTTGTGAAGA+TGG	0.456417	1_2:+73502032	Msa0091360:exon
ATCTTGACTTTGGAGTTTGA+AGG	0.460114	1_2:-73503489	None:intergenic
CCTATTATTTCAAGAAATAG+AGG	0.465686	1_2:+73503429	Msa0091360:CDS
CTTAAATTCTTCTACTAGAA+GGG	0.467982	1_2:-73503728	None:intergenic
AAAGTTCTCTTAAGCTTTGG+TGG	0.470882	1_2:-73502066	None:intergenic
AAGCAACAAGTATTTGTCTT+CGG	0.479578	1_2:+73503278	Msa0091360:CDS
AAGAGAAACTGACCTGTGTT+TGG	0.481868	1_2:-73502530	None:intergenic
ATTGAGTTGACTTGAACAAA+GGG	0.497713	1_2:-73503359	None:intergenic
GTTATCTCAAAACTAGTCTC+AGG	0.503294	1_2:+73502334	Msa0091360:CDS
AGTTGACTTGAACAAAGGGT+TGG	0.503335	1_2:-73503355	None:intergenic
AAAAGTGATGGAATTGTAAG+TGG	0.506447	1_2:+73503672	Msa0091360:CDS
ACCGTTACTCATACACTTGG+TGG	0.517214	1_2:+73501885	Msa0091360:five_prime_UTR
CACTGCAACTGGTGGAAACA+AGG	0.518087	1_2:+73502272	Msa0091360:CDS
TGACCTGTGTTTGGCGTAGA+GGG	0.523038	1_2:-73502521	None:intergenic
CCTTAATGGTGAAACTAACC+TGG	0.524129	1_2:-73503631	None:intergenic
ACTTAAGTCTAGAAGGAAGA+AGG	0.529704	1_2:+73503149	Msa0091360:CDS
ATGCTTGTAGGAGAAACTCT+TGG	0.537823	1_2:+73502994	Msa0091360:CDS
AGTTCTCTTAAGCTTTGGTG+GGG	0.545383	1_2:-73502064	None:intergenic
CAAAGAATGCTGTGGACACA+AGG	0.551328	1_2:-73503842	None:intergenic
ATTCTCTGAAGGGTCAAGAA+TGG	0.551911	1_2:+73502467	Msa0091360:intron
CAAACCGTTACTCATACACT+TGG	0.553102	1_2:+73501882	Msa0091360:five_prime_UTR
CGCAACCATCTTCACAAGGT+GGG	0.554541	1_2:-73502037	None:intergenic
CTGACCTGTGTTTGGCGTAG+AGG	0.555004	1_2:-73502522	None:intergenic
TATCTCCAAGGAATAGGCCA+TGG	0.556210	1_2:+73503310	Msa0091360:CDS
TTGACTTTGGAGTTTGAAGG+TGG	0.556654	1_2:-73503486	None:intergenic
TCTCTCTCTCTAACAGAGAC+GGG	0.559920	1_2:-73501991	None:intergenic
AAAACTGCACAGAAAAGTGA+TGG	0.564152	1_2:+73503660	Msa0091360:CDS
ATAGTGACAAAATACAATCA+AGG	0.568852	1_2:-73503761	None:intergenic
ATCTCCAAGGAATAGGCCAT+GGG	0.568882	1_2:+73503311	Msa0091360:CDS
GGAACGAGCTCTTTGAAGTG+AGG	0.574082	1_2:-73503205	None:intergenic
CTTAGCCCACGAAGTACCAT+AGG	0.574788	1_2:+73502312	Msa0091360:CDS
CTTCAGAACACTGCAACTGG+TGG	0.586535	1_2:+73502264	Msa0091360:CDS
GAACGAGCTCTTTGAAGTGA+GGG	0.590066	1_2:-73503204	None:intergenic
GGAATTGAACTGTTGATACT+GGG	0.592270	1_2:-73503707	None:intergenic
AGATAACCTATGGTACTTCG+TGG	0.597724	1_2:-73502318	None:intergenic
GTGGAAACAAGGTTGTGTCA+GGG	0.603682	1_2:+73502283	Msa0091360:CDS
CTCTAACAGAGACGGGAACA+CGG	0.604510	1_2:-73501984	None:intergenic
TTTGAAGGTGGATCAATGCA+TGG	0.607711	1_2:+73502227	Msa0091360:intron
TTGACTTGAACAAAGGGTTG+GGG	0.609764	1_2:-73503353	None:intergenic
TGGAAACAAGGTTGTGTCAG+GGG	0.610201	1_2:+73502284	Msa0091360:CDS
GATAACCTATGGTACTTCGT+GGG	0.618590	1_2:-73502317	None:intergenic
CATTAGAGAAACACTCAACA+AGG	0.623747	1_2:+73502110	Msa0091360:CDS
AGGTGGATCAATGCATGGCT+CGG	0.628242	1_2:+73502232	Msa0091360:intron
CAAACTAAACTACACAATGA+CGG	0.631209	1_2:+73503177	Msa0091360:CDS
GGGTCAAGAATGGTGCCACA+AGG	0.631810	1_2:+73502477	Msa0091360:intron
TGCCACAAGGAAATCTCCTG+TGG	0.632439	1_2:+73502490	Msa0091360:CDS
GTAGAGGGAAACTTTCCCAC+AGG	0.636539	1_2:-73502506	None:intergenic
GCCACAAGGAAATCTCCTGT+GGG	0.643915	1_2:+73502491	Msa0091360:CDS
ACCACCAAGTGTATGAGTAA+CGG	0.644203	1_2:-73501886	None:intergenic
ATATTTATACAGGTGAATGG+AGG	0.648586	1_2:+73502953	Msa0091360:intron
GGTGCAAGCAAGAATCACTC+AGG	0.650537	1_2:+73502355	Msa0091360:CDS
AACCTGGTAGCTAGTCTCGA+AGG	0.652302	1_2:-73503615	None:intergenic
TTTCCCTCTACGCCAAACAC+AGG	0.653931	1_2:+73502518	Msa0091360:CDS
TTCTCGCAACCATCTTCACA+AGG	0.654540	1_2:-73502041	None:intergenic
ATACAGAACAAAGAATGCTG+TGG	0.656525	1_2:-73503850	None:intergenic
CGGCGAATAGGGTATCTCCA+AGG	0.666411	1_2:+73503298	Msa0091360:CDS
TCGCAACCATCTTCACAAGG+TGG	0.673517	1_2:-73502038	None:intergenic
TCGAAGGAGAGAAAGATCGA+CGG	0.676915	1_2:-73503599	None:intergenic
TCCCACAGGAGATTTCCTTG+TGG	0.705582	1_2:-73502492	None:intergenic
CCAAAAGCAAAACAGGTTTG+GGG	0.721954	1_2:+73501960	Msa0091360:five_prime_UTR

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ACAAAAATTAAACTAAAATA+TGG	-	chr1_2:73502416-73502435	None:intergenic	10.0%
!!	ACAAAAATTAAACTAAAATA+TGG	-	chr1_2:73502416-73502435	None:intergenic	10.0%
!!!	TAATGTAAAATGTTTCTTTT+TGG	+	chr1_2:73502201-73502220	Msa0091360:intron	15.0%
!!!	AATGTAAAATGTTTCTTTTT+GGG	+	chr1_2:73502202-73502221	Msa0091360:intron	15.0%
!!!	TAATGTAAAATGTTTCTTTT+TGG	+	chr1_2:73502201-73502220	Msa0091360:intron	15.0%
!!!	AATGTAAAATGTTTCTTTTT+GGG	+	chr1_2:73502202-73502221	Msa0091360:intron	15.0%
!!!	GAAACATTTTACATTAATCA+AGG	-	chr1_2:73502197-73502216	None:intergenic	20.0%
!!!	ATTTCATTTTCTCAAATTAC+TGG	+	chr1_2:73502672-73502691	Msa0091360:intron	20.0%
!!	ATTCACCTGTATAAATATAA+GGG	-	chr1_2:73502951-73502970	None:intergenic	20.0%
!!!	CTATCAAATTCTTTAACTTT+TGG	-	chr1_2:73503255-73503274	None:intergenic	20.0%
!!	CTGTTCAACAAAAAATATAA+AGG	+	chr1_2:73503874-73503893	Msa0091360:three_prime_UTR	20.0%
!!	TTCAACAAAAAATATAAAGG+TGG	+	chr1_2:73503877-73503896	Msa0091360:three_prime_UTR	20.0%
!!!	GAAACATTTTACATTAATCA+AGG	-	chr1_2:73502197-73502216	None:intergenic	20.0%
!!!	ATTTCATTTTCTCAAATTAC+TGG	+	chr1_2:73502672-73502691	Msa0091360:intron	20.0%
!!	ATTCACCTGTATAAATATAA+GGG	-	chr1_2:73502951-73502970	None:intergenic	20.0%
!!!	CTATCAAATTCTTTAACTTT+TGG	-	chr1_2:73503255-73503274	None:intergenic	20.0%
!!	CTGTTCAACAAAAAATATAA+AGG	+	chr1_2:73503874-73503893	Msa0091360:three_prime_UTR	20.0%
!!	TTCAACAAAAAATATAAAGG+TGG	+	chr1_2:73503877-73503896	Msa0091360:three_prime_UTR	20.0%
!	GTTTGGAAGTAAATTTACTT+CGG	-	chr1_2:73502563-73502582	None:intergenic	25.0%
!	ATAATGTTCAAGTGAAAGTT+TGG	-	chr1_2:73502580-73502599	None:intergenic	25.0%
!	CACTTGAACATTATTTAACA+TGG	+	chr1_2:73502586-73502605	Msa0091360:intron	25.0%
!	TGAAATAATTAAGTCGAATG+CGG	-	chr1_2:73502658-73502677	None:intergenic	25.0%
!!!	CTGGTTTTAAATTGTGATTT+CGG	+	chr1_2:73502735-73502754	Msa0091360:intron	25.0%
!	TAAGTCAGACACAATTTATA+AGG	-	chr1_2:73502815-73502834	None:intergenic	25.0%
!	CATTCACCTGTATAAATATA+AGG	-	chr1_2:73502952-73502971	None:intergenic	25.0%
!	CTTATATTTATACAGGTGAA+TGG	+	chr1_2:73502950-73502969	Msa0091360:intron	25.0%
!!!	TCAAATTCTTTAACTTTTGG+AGG	-	chr1_2:73503252-73503271	None:intergenic	25.0%
!!	CCTCTATTTCTTGAAATAAT+AGG	-	chr1_2:73503432-73503451	None:intergenic	25.0%
!	CCTATTATTTCAAGAAATAG+AGG	+	chr1_2:73503429-73503448	Msa0091360:CDS	25.0%
!	GATTTAATCAAAAACTTGTG+TGG	-	chr1_2:73503465-73503484	None:intergenic	25.0%
!	CTTAAATTCTTCTACTAGAA+GGG	-	chr1_2:73503731-73503750	None:intergenic	25.0%
!	ATAGTGACAAAATACAATCA+AGG	-	chr1_2:73503764-73503783	None:intergenic	25.0%
!!	TTGATTGTATTTTGTCACTA+TGG	+	chr1_2:73503763-73503782	Msa0091360:three_prime_UTR	25.0%
!	GTTTGGAAGTAAATTTACTT+CGG	-	chr1_2:73502563-73502582	None:intergenic	25.0%
!	ATAATGTTCAAGTGAAAGTT+TGG	-	chr1_2:73502580-73502599	None:intergenic	25.0%
!	CACTTGAACATTATTTAACA+TGG	+	chr1_2:73502586-73502605	Msa0091360:intron	25.0%
!	TGAAATAATTAAGTCGAATG+CGG	-	chr1_2:73502658-73502677	None:intergenic	25.0%
!!!	CTGGTTTTAAATTGTGATTT+CGG	+	chr1_2:73502735-73502754	Msa0091360:intron	25.0%
!	TAAGTCAGACACAATTTATA+AGG	-	chr1_2:73502815-73502834	None:intergenic	25.0%
!	CATTCACCTGTATAAATATA+AGG	-	chr1_2:73502952-73502971	None:intergenic	25.0%
!	CTTATATTTATACAGGTGAA+TGG	+	chr1_2:73502950-73502969	Msa0091360:intron	25.0%
!!!	TCAAATTCTTTAACTTTTGG+AGG	-	chr1_2:73503252-73503271	None:intergenic	25.0%
!!	CCTCTATTTCTTGAAATAAT+AGG	-	chr1_2:73503432-73503451	None:intergenic	25.0%
!	CCTATTATTTCAAGAAATAG+AGG	+	chr1_2:73503429-73503448	Msa0091360:CDS	25.0%
!	GATTTAATCAAAAACTTGTG+TGG	-	chr1_2:73503465-73503484	None:intergenic	25.0%
!	CTTAAATTCTTCTACTAGAA+GGG	-	chr1_2:73503731-73503750	None:intergenic	25.0%
!	ATAGTGACAAAATACAATCA+AGG	-	chr1_2:73503764-73503783	None:intergenic	25.0%
!!	TTGATTGTATTTTGTCACTA+TGG	+	chr1_2:73503763-73503782	Msa0091360:three_prime_UTR	25.0%
!!!	GTAACGGTTTGTTTTTTCAA+CGG	-	chr1_2:73501873-73501892	None:intergenic	30.0%
!!!	ACTAGTTTTGAGATAACCTA+TGG	-	chr1_2:73502331-73502350	None:intergenic	30.0%
!!!	GGTACTTTTTCTTTTCTTCA+TGG	+	chr1_2:73502376-73502395	Msa0091360:intron	30.0%
!	TTTTGTTACCATTCTCTGAA+GGG	+	chr1_2:73502457-73502476	Msa0091360:intron	30.0%
!	TGCGAGTGTTATTACTTATT+AGG	+	chr1_2:73502881-73502900	Msa0091360:intron	30.0%
	GTATAAATATAAGGGTTCAC+AGG	-	chr1_2:73502943-73502962	None:intergenic	30.0%
	GTGAACCCTTATATTTATAC+AGG	+	chr1_2:73502943-73502962	Msa0091360:intron	30.0%
	ATATTTATACAGGTGAATGG+AGG	+	chr1_2:73502953-73502972	Msa0091360:intron	30.0%
!	AACTCTTGGAGAAATTTTAC+AGG	+	chr1_2:73503008-73503027	Msa0091360:CDS	30.0%
!!	TTTGAGACATTGGTGTTTTT+GGG	-	chr1_2:73503095-73503114	None:intergenic	30.0%
	CAAACTAAACTACACAATGA+CGG	+	chr1_2:73503177-73503196	Msa0091360:CDS	30.0%
	AGAAACCTTAAAAGTGATTC+TGG	-	chr1_2:73503229-73503248	None:intergenic	30.0%
	AAGCAACAAGTATTTGTCTT+CGG	+	chr1_2:73503278-73503297	Msa0091360:CDS	30.0%
!!	ATTGAGTTGACTTGAACAAA+GGG	-	chr1_2:73503362-73503381	None:intergenic	30.0%
!	AAAAGTGATGGAATTGTAAG+TGG	+	chr1_2:73503672-73503691	Msa0091360:CDS	30.0%
	CCTTAAATTCTTCTACTAGA+AGG	-	chr1_2:73503732-73503751	None:intergenic	30.0%
	CCTTCTAGTAGAAGAATTTA+AGG	+	chr1_2:73503729-73503748	Msa0091360:CDS	30.0%
!!!	CTTGAGAGATTTTGTTGTTA+AGG	+	chr1_2:73503813-73503832	Msa0091360:three_prime_UTR	30.0%
!!!	GTAACGGTTTGTTTTTTCAA+CGG	-	chr1_2:73501873-73501892	None:intergenic	30.0%
!!!	ACTAGTTTTGAGATAACCTA+TGG	-	chr1_2:73502331-73502350	None:intergenic	30.0%
!!!	GGTACTTTTTCTTTTCTTCA+TGG	+	chr1_2:73502376-73502395	Msa0091360:intron	30.0%
!	TTTTGTTACCATTCTCTGAA+GGG	+	chr1_2:73502457-73502476	Msa0091360:intron	30.0%
!	TGCGAGTGTTATTACTTATT+AGG	+	chr1_2:73502881-73502900	Msa0091360:intron	30.0%
	GTATAAATATAAGGGTTCAC+AGG	-	chr1_2:73502943-73502962	None:intergenic	30.0%
	GTGAACCCTTATATTTATAC+AGG	+	chr1_2:73502943-73502962	Msa0091360:intron	30.0%
	ATATTTATACAGGTGAATGG+AGG	+	chr1_2:73502953-73502972	Msa0091360:intron	30.0%
!	AACTCTTGGAGAAATTTTAC+AGG	+	chr1_2:73503008-73503027	Msa0091360:CDS	30.0%
!!	TTTGAGACATTGGTGTTTTT+GGG	-	chr1_2:73503095-73503114	None:intergenic	30.0%
	CAAACTAAACTACACAATGA+CGG	+	chr1_2:73503177-73503196	Msa0091360:CDS	30.0%
	AGAAACCTTAAAAGTGATTC+TGG	-	chr1_2:73503229-73503248	None:intergenic	30.0%
	AAGCAACAAGTATTTGTCTT+CGG	+	chr1_2:73503278-73503297	Msa0091360:CDS	30.0%
!!	ATTGAGTTGACTTGAACAAA+GGG	-	chr1_2:73503362-73503381	None:intergenic	30.0%
!	AAAAGTGATGGAATTGTAAG+TGG	+	chr1_2:73503672-73503691	Msa0091360:CDS	30.0%
	CCTTAAATTCTTCTACTAGA+AGG	-	chr1_2:73503732-73503751	None:intergenic	30.0%
	CCTTCTAGTAGAAGAATTTA+AGG	+	chr1_2:73503729-73503748	Msa0091360:CDS	30.0%
!!!	CTTGAGAGATTTTGTTGTTA+AGG	+	chr1_2:73503813-73503832	Msa0091360:three_prime_UTR	30.0%
!!!	TTGCTTTTGGTTTCAGAGTT+TGG	-	chr1_2:73501950-73501969	None:intergenic	35.0%
!	TCTGAAACCAAAAGCAAAAC+AGG	+	chr1_2:73501953-73501972	Msa0091360:five_prime_UTR	35.0%
	AACCAAAAGCAAAACAGGTT+TGG	+	chr1_2:73501958-73501977	Msa0091360:five_prime_UTR	35.0%
	ACCAAAAGCAAAACAGGTTT+GGG	+	chr1_2:73501959-73501978	Msa0091360:five_prime_UTR	35.0%
!	AAGTTCTCTTAAGCTTTGGT+GGG	-	chr1_2:73502068-73502087	None:intergenic	35.0%
!	AAAGTTCTCTTAAGCTTTGG+TGG	-	chr1_2:73502069-73502088	None:intergenic	35.0%
	GCTAAAGTTCTCTTAAGCTT+TGG	-	chr1_2:73502072-73502091	None:intergenic	35.0%
	AGTGTTTCTCTAATGAGAAC+AGG	-	chr1_2:73502105-73502124	None:intergenic	35.0%
	CATTAGAGAAACACTCAACA+AGG	+	chr1_2:73502110-73502129	Msa0091360:CDS	35.0%
!!!	GTTTCTTTTTGGGTCTTTGA+AGG	+	chr1_2:73502212-73502231	Msa0091360:intron	35.0%
!	GTTATCTCAAAACTAGTCTC+AGG	+	chr1_2:73502334-73502353	Msa0091360:CDS	35.0%
!!	GTTTTGTTACCATTCTCTGA+AGG	+	chr1_2:73502456-73502475	Msa0091360:intron	35.0%
	CTTCTAATCGAAGATGTGTA+AGG	+	chr1_2:73502612-73502631	Msa0091360:intron	35.0%
!	AGTGCTTCATAGTCTTAATC+TGG	+	chr1_2:73502716-73502735	Msa0091360:intron	35.0%
	AGAGAAATTGTTTCAGCAGT+TGG	+	chr1_2:73503045-73503064	Msa0091360:CDS	35.0%
!!!	CTTTGAGACATTGGTGTTTT+TGG	-	chr1_2:73503096-73503115	None:intergenic	35.0%
	CAAAAACACCAATGTCTCAA+AGG	+	chr1_2:73503094-73503113	Msa0091360:CDS	35.0%
!!	TCGAGGTTTATTTTCTTGCT+TGG	-	chr1_2:73503120-73503139	None:intergenic	35.0%
!!	ACTTAAGTTGTGTGTTTTCG+AGG	-	chr1_2:73503137-73503156	None:intergenic	35.0%
	ACACACAACTTAAGTCTAGA+AGG	+	chr1_2:73503142-73503161	Msa0091360:CDS	35.0%
	ACTTAAGTCTAGAAGGAAGA+AGG	+	chr1_2:73503149-73503168	Msa0091360:CDS	35.0%
!!	TCGTTCCAGAATCACTTTTA+AGG	+	chr1_2:73503221-73503240	Msa0091360:CDS	35.0%
!!!	AGTACAGTTTTTTTAGCCCA+TGG	-	chr1_2:73503330-73503349	None:intergenic	35.0%
!!	CATTGAGTTGACTTGAACAA+AGG	-	chr1_2:73503363-73503382	None:intergenic	35.0%
!	AACAGCAGTTTTGCAAAACA+AGG	+	chr1_2:73503403-73503422	Msa0091360:CDS	35.0%
!!	AAAAACTTGTGTGGTGTTGT+TGG	-	chr1_2:73503456-73503475	None:intergenic	35.0%
!!	ATCTTGACTTTGGAGTTTGA+AGG	-	chr1_2:73503492-73503511	None:intergenic	35.0%
!	AGTGCTTTTGATCTTGACTT+TGG	-	chr1_2:73503502-73503521	None:intergenic	35.0%
	AAAACTGCACAGAAAAGTGA+TGG	+	chr1_2:73503660-73503679	Msa0091360:CDS	35.0%
	GGAATTGAACTGTTGATACT+GGG	-	chr1_2:73503710-73503729	None:intergenic	35.0%
	ATACAGAACAAAGAATGCTG+TGG	-	chr1_2:73503853-73503872	None:intergenic	35.0%
!!!	TTGCTTTTGGTTTCAGAGTT+TGG	-	chr1_2:73501950-73501969	None:intergenic	35.0%
!	TCTGAAACCAAAAGCAAAAC+AGG	+	chr1_2:73501953-73501972	Msa0091360:five_prime_UTR	35.0%
	AACCAAAAGCAAAACAGGTT+TGG	+	chr1_2:73501958-73501977	Msa0091360:five_prime_UTR	35.0%
	ACCAAAAGCAAAACAGGTTT+GGG	+	chr1_2:73501959-73501978	Msa0091360:five_prime_UTR	35.0%
!	AAGTTCTCTTAAGCTTTGGT+GGG	-	chr1_2:73502068-73502087	None:intergenic	35.0%
!	AAAGTTCTCTTAAGCTTTGG+TGG	-	chr1_2:73502069-73502088	None:intergenic	35.0%
	GCTAAAGTTCTCTTAAGCTT+TGG	-	chr1_2:73502072-73502091	None:intergenic	35.0%
	AGTGTTTCTCTAATGAGAAC+AGG	-	chr1_2:73502105-73502124	None:intergenic	35.0%
	CATTAGAGAAACACTCAACA+AGG	+	chr1_2:73502110-73502129	Msa0091360:CDS	35.0%
!!!	GTTTCTTTTTGGGTCTTTGA+AGG	+	chr1_2:73502212-73502231	Msa0091360:intron	35.0%
!	GTTATCTCAAAACTAGTCTC+AGG	+	chr1_2:73502334-73502353	Msa0091360:CDS	35.0%
!!	GTTTTGTTACCATTCTCTGA+AGG	+	chr1_2:73502456-73502475	Msa0091360:intron	35.0%
	CTTCTAATCGAAGATGTGTA+AGG	+	chr1_2:73502612-73502631	Msa0091360:intron	35.0%
!	AGTGCTTCATAGTCTTAATC+TGG	+	chr1_2:73502716-73502735	Msa0091360:intron	35.0%
	AGAGAAATTGTTTCAGCAGT+TGG	+	chr1_2:73503045-73503064	Msa0091360:CDS	35.0%
!!!	CTTTGAGACATTGGTGTTTT+TGG	-	chr1_2:73503096-73503115	None:intergenic	35.0%
	CAAAAACACCAATGTCTCAA+AGG	+	chr1_2:73503094-73503113	Msa0091360:CDS	35.0%
!!	TCGAGGTTTATTTTCTTGCT+TGG	-	chr1_2:73503120-73503139	None:intergenic	35.0%
!!	ACTTAAGTTGTGTGTTTTCG+AGG	-	chr1_2:73503137-73503156	None:intergenic	35.0%
	ACACACAACTTAAGTCTAGA+AGG	+	chr1_2:73503142-73503161	Msa0091360:CDS	35.0%
	ACTTAAGTCTAGAAGGAAGA+AGG	+	chr1_2:73503149-73503168	Msa0091360:CDS	35.0%
!!	TCGTTCCAGAATCACTTTTA+AGG	+	chr1_2:73503221-73503240	Msa0091360:CDS	35.0%
!!!	AGTACAGTTTTTTTAGCCCA+TGG	-	chr1_2:73503330-73503349	None:intergenic	35.0%
!!	CATTGAGTTGACTTGAACAA+AGG	-	chr1_2:73503363-73503382	None:intergenic	35.0%
!	AACAGCAGTTTTGCAAAACA+AGG	+	chr1_2:73503403-73503422	Msa0091360:CDS	35.0%
!!	AAAAACTTGTGTGGTGTTGT+TGG	-	chr1_2:73503456-73503475	None:intergenic	35.0%
!!	ATCTTGACTTTGGAGTTTGA+AGG	-	chr1_2:73503492-73503511	None:intergenic	35.0%
!	AGTGCTTTTGATCTTGACTT+TGG	-	chr1_2:73503502-73503521	None:intergenic	35.0%
	AAAACTGCACAGAAAAGTGA+TGG	+	chr1_2:73503660-73503679	Msa0091360:CDS	35.0%
	GGAATTGAACTGTTGATACT+GGG	-	chr1_2:73503710-73503729	None:intergenic	35.0%
	ATACAGAACAAAGAATGCTG+TGG	-	chr1_2:73503853-73503872	None:intergenic	35.0%
!!!	CGGTTTGTTTTTTCAACGGT+CGG	-	chr1_2:73501869-73501888	None:intergenic	40.0%
	CAAACCGTTACTCATACACT+TGG	+	chr1_2:73501882-73501901	Msa0091360:five_prime_UTR	40.0%
	ACCACCAAGTGTATGAGTAA+CGG	-	chr1_2:73501889-73501908	None:intergenic	40.0%
	CCAAAAGCAAAACAGGTTTG+GGG	+	chr1_2:73501960-73501979	Msa0091360:five_prime_UTR	40.0%
!	AGTTCTCTTAAGCTTTGGTG+GGG	-	chr1_2:73502067-73502086	None:intergenic	40.0%
!!!	TCTTTTTGGGTCTTTGAAGG+TGG	+	chr1_2:73502215-73502234	Msa0091360:intron	40.0%
	TTTGAAGGTGGATCAATGCA+TGG	+	chr1_2:73502227-73502246	Msa0091360:intron	40.0%
	GATAACCTATGGTACTTCGT+GGG	-	chr1_2:73502320-73502339	None:intergenic	40.0%
	AGATAACCTATGGTACTTCG+TGG	-	chr1_2:73502321-73502340	None:intergenic	40.0%
	ATTCTTGACCCTTCAGAGAA+TGG	-	chr1_2:73502468-73502487	None:intergenic	40.0%
!	ATTCTCTGAAGGGTCAAGAA+TGG	+	chr1_2:73502467-73502486	Msa0091360:intron	40.0%
	AAGAGAAACTGACCTGTGTT+TGG	-	chr1_2:73502533-73502552	None:intergenic	40.0%
	ATAAGGGTTCACAGGTGAAT+AGG	-	chr1_2:73502935-73502954	None:intergenic	40.0%
	ATGCTTGTAGGAGAAACTCT+TGG	+	chr1_2:73502994-73503013	Msa0091360:CDS	40.0%
!!!	GTTTTTGGGTCATCTTTGGA+GGG	-	chr1_2:73503081-73503100	None:intergenic	40.0%
!!!	TGTTTTTGGGTCATCTTTGG+AGG	-	chr1_2:73503082-73503101	None:intergenic	40.0%
!!!	TGGTGTTTTTGGGTCATCTT+TGG	-	chr1_2:73503085-73503104	None:intergenic	40.0%
	AGTATTTGTCTTCGGCGAAT+AGG	+	chr1_2:73503286-73503305	Msa0091360:CDS	40.0%
	GTATTTGTCTTCGGCGAATA+GGG	+	chr1_2:73503287-73503306	Msa0091360:CDS	40.0%
!	ATAGGGTATCTCCAAGGAAT+AGG	+	chr1_2:73503304-73503323	Msa0091360:CDS	40.0%
!	TTGACTTGAACAAAGGGTTG+GGG	-	chr1_2:73503356-73503375	None:intergenic	40.0%
!!	GTTGACTTGAACAAAGGGTT+GGG	-	chr1_2:73503357-73503376	None:intergenic	40.0%
!!	AGTTGACTTGAACAAAGGGT+TGG	-	chr1_2:73503358-73503377	None:intergenic	40.0%
!!	TTGACTTTGGAGTTTGAAGG+TGG	-	chr1_2:73503489-73503508	None:intergenic	40.0%
!	CTCAAACTTGCAAGTCTTGT+GGG	-	chr1_2:73503543-73503562	None:intergenic	40.0%
	TTCTCCAAAAAGATCGACTG+CGG	+	chr1_2:73503569-73503588	Msa0091360:CDS	40.0%
	CCTTAATGGTGAAACTAACC+TGG	-	chr1_2:73503634-73503653	None:intergenic	40.0%
!!	CCAGGTTAGTTTCACCATTA+AGG	+	chr1_2:73503631-73503650	Msa0091360:CDS	40.0%
!	GCAGTTTTCTTGCTCCTTAA+TGG	-	chr1_2:73503648-73503667	None:intergenic	40.0%
	GGGAATTGAACTGTTGATAC+TGG	-	chr1_2:73503711-73503730	None:intergenic	40.0%
!!!	CGGTTTGTTTTTTCAACGGT+CGG	-	chr1_2:73501869-73501888	None:intergenic	40.0%
	CAAACCGTTACTCATACACT+TGG	+	chr1_2:73501882-73501901	Msa0091360:five_prime_UTR	40.0%
	ACCACCAAGTGTATGAGTAA+CGG	-	chr1_2:73501889-73501908	None:intergenic	40.0%
	CCAAAAGCAAAACAGGTTTG+GGG	+	chr1_2:73501960-73501979	Msa0091360:five_prime_UTR	40.0%
!	AGTTCTCTTAAGCTTTGGTG+GGG	-	chr1_2:73502067-73502086	None:intergenic	40.0%
!!!	TCTTTTTGGGTCTTTGAAGG+TGG	+	chr1_2:73502215-73502234	Msa0091360:intron	40.0%
	TTTGAAGGTGGATCAATGCA+TGG	+	chr1_2:73502227-73502246	Msa0091360:intron	40.0%
	GATAACCTATGGTACTTCGT+GGG	-	chr1_2:73502320-73502339	None:intergenic	40.0%
	AGATAACCTATGGTACTTCG+TGG	-	chr1_2:73502321-73502340	None:intergenic	40.0%
	ATTCTTGACCCTTCAGAGAA+TGG	-	chr1_2:73502468-73502487	None:intergenic	40.0%
!	ATTCTCTGAAGGGTCAAGAA+TGG	+	chr1_2:73502467-73502486	Msa0091360:intron	40.0%
	AAGAGAAACTGACCTGTGTT+TGG	-	chr1_2:73502533-73502552	None:intergenic	40.0%
	ATAAGGGTTCACAGGTGAAT+AGG	-	chr1_2:73502935-73502954	None:intergenic	40.0%
	ATGCTTGTAGGAGAAACTCT+TGG	+	chr1_2:73502994-73503013	Msa0091360:CDS	40.0%
!!!	GTTTTTGGGTCATCTTTGGA+GGG	-	chr1_2:73503081-73503100	None:intergenic	40.0%
!!!	TGTTTTTGGGTCATCTTTGG+AGG	-	chr1_2:73503082-73503101	None:intergenic	40.0%
!!!	TGGTGTTTTTGGGTCATCTT+TGG	-	chr1_2:73503085-73503104	None:intergenic	40.0%
	AGTATTTGTCTTCGGCGAAT+AGG	+	chr1_2:73503286-73503305	Msa0091360:CDS	40.0%
	GTATTTGTCTTCGGCGAATA+GGG	+	chr1_2:73503287-73503306	Msa0091360:CDS	40.0%
!	ATAGGGTATCTCCAAGGAAT+AGG	+	chr1_2:73503304-73503323	Msa0091360:CDS	40.0%
!	TTGACTTGAACAAAGGGTTG+GGG	-	chr1_2:73503356-73503375	None:intergenic	40.0%
!!	GTTGACTTGAACAAAGGGTT+GGG	-	chr1_2:73503357-73503376	None:intergenic	40.0%
!!	AGTTGACTTGAACAAAGGGT+TGG	-	chr1_2:73503358-73503377	None:intergenic	40.0%
!!	TTGACTTTGGAGTTTGAAGG+TGG	-	chr1_2:73503489-73503508	None:intergenic	40.0%
!	CTCAAACTTGCAAGTCTTGT+GGG	-	chr1_2:73503543-73503562	None:intergenic	40.0%
	TTCTCCAAAAAGATCGACTG+CGG	+	chr1_2:73503569-73503588	Msa0091360:CDS	40.0%
	CCTTAATGGTGAAACTAACC+TGG	-	chr1_2:73503634-73503653	None:intergenic	40.0%
!!	CCAGGTTAGTTTCACCATTA+AGG	+	chr1_2:73503631-73503650	Msa0091360:CDS	40.0%
!	GCAGTTTTCTTGCTCCTTAA+TGG	-	chr1_2:73503648-73503667	None:intergenic	40.0%
	GGGAATTGAACTGTTGATAC+TGG	-	chr1_2:73503711-73503730	None:intergenic	40.0%
	ACCGTTACTCATACACTTGG+TGG	+	chr1_2:73501885-73501904	Msa0091360:five_prime_UTR	45.0%
!	CCCCAAACCTGTTTTGCTTT+TGG	-	chr1_2:73501963-73501982	None:intergenic	45.0%
	TCTCTCTCTCTAACAGAGAC+GGG	-	chr1_2:73501994-73502013	None:intergenic	45.0%
	CTCTCTCTCTCTAACAGAGA+CGG	-	chr1_2:73501995-73502014	None:intergenic	45.0%
	TTCTCGCAACCATCTTCACA+AGG	-	chr1_2:73502044-73502063	None:intergenic	45.0%
	GAACTTCAGAACACTGCAAC+TGG	+	chr1_2:73502261-73502280	Msa0091360:CDS	45.0%
	GTGGAAACAAGGTTGTGTCA+GGG	+	chr1_2:73502283-73502302	Msa0091360:CDS	45.0%
	TGGAAACAAGGTTGTGTCAG+GGG	+	chr1_2:73502284-73502303	Msa0091360:CDS	45.0%
	TTGTTGCCTGCAATGCTTGT+AGG	+	chr1_2:73502982-73503001	Msa0091360:CDS	45.0%
!	GTTTCTCCTACAAGCATTGC+AGG	-	chr1_2:73502991-73503010	None:intergenic	45.0%
!!	TTGCTTGGCCTTTGAGACAT+TGG	-	chr1_2:73503105-73503124	None:intergenic	45.0%
!!	GAACGAGCTCTTTGAAGTGA+GGG	-	chr1_2:73503207-73503226	None:intergenic	45.0%
	TATCTCCAAGGAATAGGCCA+TGG	+	chr1_2:73503310-73503329	Msa0091360:CDS	45.0%
	ATCTCCAAGGAATAGGCCAT+GGG	+	chr1_2:73503311-73503330	Msa0091360:CDS	45.0%
	GCTCAAACTTGCAAGTCTTG+TGG	-	chr1_2:73503544-73503563	None:intergenic	45.0%
!	TTAGCCGCAGTCGATCTTTT+TGG	-	chr1_2:73503576-73503595	None:intergenic	45.0%
	TCGAAGGAGAGAAAGATCGA+CGG	-	chr1_2:73503602-73503621	None:intergenic	45.0%
	CAAAGAATGCTGTGGACACA+AGG	-	chr1_2:73503845-73503864	None:intergenic	45.0%
	ACCGTTACTCATACACTTGG+TGG	+	chr1_2:73501885-73501904	Msa0091360:five_prime_UTR	45.0%
!	CCCCAAACCTGTTTTGCTTT+TGG	-	chr1_2:73501963-73501982	None:intergenic	45.0%
	TCTCTCTCTCTAACAGAGAC+GGG	-	chr1_2:73501994-73502013	None:intergenic	45.0%
	CTCTCTCTCTCTAACAGAGA+CGG	-	chr1_2:73501995-73502014	None:intergenic	45.0%
	TTCTCGCAACCATCTTCACA+AGG	-	chr1_2:73502044-73502063	None:intergenic	45.0%
	GAACTTCAGAACACTGCAAC+TGG	+	chr1_2:73502261-73502280	Msa0091360:CDS	45.0%
	GTGGAAACAAGGTTGTGTCA+GGG	+	chr1_2:73502283-73502302	Msa0091360:CDS	45.0%
	TGGAAACAAGGTTGTGTCAG+GGG	+	chr1_2:73502284-73502303	Msa0091360:CDS	45.0%
	TTGTTGCCTGCAATGCTTGT+AGG	+	chr1_2:73502982-73503001	Msa0091360:CDS	45.0%
!	GTTTCTCCTACAAGCATTGC+AGG	-	chr1_2:73502991-73503010	None:intergenic	45.0%
!!	TTGCTTGGCCTTTGAGACAT+TGG	-	chr1_2:73503105-73503124	None:intergenic	45.0%
!!	GAACGAGCTCTTTGAAGTGA+GGG	-	chr1_2:73503207-73503226	None:intergenic	45.0%
	TATCTCCAAGGAATAGGCCA+TGG	+	chr1_2:73503310-73503329	Msa0091360:CDS	45.0%
	ATCTCCAAGGAATAGGCCAT+GGG	+	chr1_2:73503311-73503330	Msa0091360:CDS	45.0%
	GCTCAAACTTGCAAGTCTTG+TGG	-	chr1_2:73503544-73503563	None:intergenic	45.0%
!	TTAGCCGCAGTCGATCTTTT+TGG	-	chr1_2:73503576-73503595	None:intergenic	45.0%
	TCGAAGGAGAGAAAGATCGA+CGG	-	chr1_2:73503602-73503621	None:intergenic	45.0%
	CAAAGAATGCTGTGGACACA+AGG	-	chr1_2:73503845-73503864	None:intergenic	45.0%
	CTCTAACAGAGACGGGAACA+CGG	-	chr1_2:73501987-73502006	None:intergenic	50.0%
	TCAGACCCACCTTGTGAAGA+TGG	+	chr1_2:73502032-73502051	Msa0091360:exon	50.0%
	CGCAACCATCTTCACAAGGT+GGG	-	chr1_2:73502040-73502059	None:intergenic	50.0%
	TCGCAACCATCTTCACAAGG+TGG	-	chr1_2:73502041-73502060	None:intergenic	50.0%
	AGGTGGATCAATGCATGGCT+CGG	+	chr1_2:73502232-73502251	Msa0091360:intron	50.0%
	CTTCAGAACACTGCAACTGG+TGG	+	chr1_2:73502264-73502283	Msa0091360:CDS	50.0%
	CACTGCAACTGGTGGAAACA+AGG	+	chr1_2:73502272-73502291	Msa0091360:CDS	50.0%
	GGTGGAAACAAGGTTGTGTC+AGG	+	chr1_2:73502282-73502301	Msa0091360:CDS	50.0%
!	CTTAGCCCACGAAGTACCAT+AGG	+	chr1_2:73502312-73502331	Msa0091360:CDS	50.0%
	GGTGCAAGCAAGAATCACTC+AGG	+	chr1_2:73502355-73502374	Msa0091360:CDS	50.0%
	TGCCACAAGGAAATCTCCTG+TGG	+	chr1_2:73502490-73502509	Msa0091360:CDS	50.0%
	GCCACAAGGAAATCTCCTGT+GGG	+	chr1_2:73502491-73502510	Msa0091360:CDS	50.0%
	TCCCACAGGAGATTTCCTTG+TGG	-	chr1_2:73502495-73502514	None:intergenic	50.0%
	GTAGAGGGAAACTTTCCCAC+AGG	-	chr1_2:73502509-73502528	None:intergenic	50.0%
	TTTCCCTCTACGCCAAACAC+AGG	+	chr1_2:73502518-73502537	Msa0091360:CDS	50.0%
	TGACCTGTGTTTGGCGTAGA+GGG	-	chr1_2:73502524-73502543	None:intergenic	50.0%
!!	GGAACGAGCTCTTTGAAGTG+AGG	-	chr1_2:73503208-73503227	None:intergenic	50.0%
	TTAGCCCATGGCCTATTCCT+TGG	-	chr1_2:73503318-73503337	None:intergenic	50.0%
!	AACCTGGTAGCTAGTCTCGA+AGG	-	chr1_2:73503618-73503637	None:intergenic	50.0%
	CTCTAACAGAGACGGGAACA+CGG	-	chr1_2:73501987-73502006	None:intergenic	50.0%
	TCAGACCCACCTTGTGAAGA+TGG	+	chr1_2:73502032-73502051	Msa0091360:exon	50.0%
	CGCAACCATCTTCACAAGGT+GGG	-	chr1_2:73502040-73502059	None:intergenic	50.0%
	TCGCAACCATCTTCACAAGG+TGG	-	chr1_2:73502041-73502060	None:intergenic	50.0%
	AGGTGGATCAATGCATGGCT+CGG	+	chr1_2:73502232-73502251	Msa0091360:intron	50.0%
	CTTCAGAACACTGCAACTGG+TGG	+	chr1_2:73502264-73502283	Msa0091360:CDS	50.0%
	CACTGCAACTGGTGGAAACA+AGG	+	chr1_2:73502272-73502291	Msa0091360:CDS	50.0%
	GGTGGAAACAAGGTTGTGTC+AGG	+	chr1_2:73502282-73502301	Msa0091360:CDS	50.0%
!	CTTAGCCCACGAAGTACCAT+AGG	+	chr1_2:73502312-73502331	Msa0091360:CDS	50.0%
	GGTGCAAGCAAGAATCACTC+AGG	+	chr1_2:73502355-73502374	Msa0091360:CDS	50.0%
	TGCCACAAGGAAATCTCCTG+TGG	+	chr1_2:73502490-73502509	Msa0091360:CDS	50.0%
	GCCACAAGGAAATCTCCTGT+GGG	+	chr1_2:73502491-73502510	Msa0091360:CDS	50.0%
	TCCCACAGGAGATTTCCTTG+TGG	-	chr1_2:73502495-73502514	None:intergenic	50.0%
	GTAGAGGGAAACTTTCCCAC+AGG	-	chr1_2:73502509-73502528	None:intergenic	50.0%
	TTTCCCTCTACGCCAAACAC+AGG	+	chr1_2:73502518-73502537	Msa0091360:CDS	50.0%
	TGACCTGTGTTTGGCGTAGA+GGG	-	chr1_2:73502524-73502543	None:intergenic	50.0%
!!	GGAACGAGCTCTTTGAAGTG+AGG	-	chr1_2:73503208-73503227	None:intergenic	50.0%
	TTAGCCCATGGCCTATTCCT+TGG	-	chr1_2:73503318-73503337	None:intergenic	50.0%
!	AACCTGGTAGCTAGTCTCGA+AGG	-	chr1_2:73503618-73503637	None:intergenic	50.0%
!!	GGGTCAAGAATGGTGCCACA+AGG	+	chr1_2:73502477-73502496	Msa0091360:intron	55.0%
	CTGACCTGTGTTTGGCGTAG+AGG	-	chr1_2:73502525-73502544	None:intergenic	55.0%
!	CGGCGAATAGGGTATCTCCA+AGG	+	chr1_2:73503298-73503317	Msa0091360:CDS	55.0%
!	CTCCTTCGAGACTAGCTACC+AGG	+	chr1_2:73503613-73503632	Msa0091360:CDS	55.0%
!!	GGGTCAAGAATGGTGCCACA+AGG	+	chr1_2:73502477-73502496	Msa0091360:intron	55.0%
	CTGACCTGTGTTTGGCGTAG+AGG	-	chr1_2:73502525-73502544	None:intergenic	55.0%
!	CGGCGAATAGGGTATCTCCA+AGG	+	chr1_2:73503298-73503317	Msa0091360:CDS	55.0%
!	CTCCTTCGAGACTAGCTACC+AGG	+	chr1_2:73503613-73503632	Msa0091360:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_2	gene	73501864	73503913	73501864	ID=Msa0091360;Name=Msa0091360
chr1_2	mRNA	73501864	73503913	73501864	ID=Msa0091360-mRNA-1;Parent=Msa0091360;Name=Msa0091360-mRNA-1;_AED=0.13;_eAED=0.13;_QI=187\|1\|1\|1\|1\|1\|4\|164\|356
chr1_2	exon	73501864	73502131	73501864	ID=Msa0091360-mRNA-1:exon:25783;Parent=Msa0091360-mRNA-1
chr1_2	exon	73502234	73502376	73502234	ID=Msa0091360-mRNA-1:exon:25784;Parent=Msa0091360-mRNA-1
chr1_2	exon	73502478	73502539	73502478	ID=Msa0091360-mRNA-1:exon:25785;Parent=Msa0091360-mRNA-1
chr1_2	exon	73502965	73503913	73502965	ID=Msa0091360-mRNA-1:exon:25786;Parent=Msa0091360-mRNA-1
chr1_2	five_prime_UTR	73501864	73502050	73501864	ID=Msa0091360-mRNA-1:five_prime_utr;Parent=Msa0091360-mRNA-1
chr1_2	CDS	73502051	73502131	73502051	ID=Msa0091360-mRNA-1:cds;Parent=Msa0091360-mRNA-1
chr1_2	CDS	73502234	73502376	73502234	ID=Msa0091360-mRNA-1:cds;Parent=Msa0091360-mRNA-1
chr1_2	CDS	73502478	73502539	73502478	ID=Msa0091360-mRNA-1:cds;Parent=Msa0091360-mRNA-1
chr1_2	CDS	73502965	73503749	73502965	ID=Msa0091360-mRNA-1:cds;Parent=Msa0091360-mRNA-1
chr1_2	three_prime_UTR	73503750	73503913	73503750	ID=Msa0091360-mRNA-1:three_prime_utr;Parent=Msa0091360-mRNA-1

Gene Sequence

>Msa0091360

ATGGTTGCGAGAACCCCACCAAAGCTTAAGAGAACTTTAGCTGCTCTGAATCCTGTTCTCATTAGAGAAACACTCAACAAGGTGGATCAATGCATGGCTCGGCTGCAAGAACTTCAGAACACTGCAACTGGTGGAAACAAGGTTGTGTCAGGGGTCAATCTTAGCCCACGAAGTACCATAGGTTATCTCAAAACTAGTCTCAGGTGCAAGCAAGAATCACTCAGGGTCAAGAATGGTGCCACAAGGAAATCTCCTGTGGGAAAGTTTCCCTCTACGCCAAACACAGGTGAATGGAGGCGAATGTTGTTGCCTGCAATGCTTGTAGGAGAAACTCTTGGAGAAATTTTACAGGCTAGTCAATTTGCAAGAGAAATTGTTTCAGCAGTTGGTGACAAAACTCCCTCCAAAGATGACCCAAAAACACCAATGTCTCAAAGGCCAAGCAAGAAAATAAACCTCGAAAACACACAACTTAAGTCTAGAAGGAAGAAGGAGAAACAAACTAAACTACACAATGACGGTTCTCCCTCACTTCAAAGAGCTCGTTCCAGAATCACTTTTAAGGTTTCTCCTCCAAAAGTTAAAGAATTTGATAGAGAAAGCAACAAGTATTTGTCTTCGGCGAATAGGGTATCTCCAAGGAATAGGCCATGGGCTAAAAAAACTGTACTTTTCCCCAACCCTTTGTTCAAGTCAACTCAATGTTCTTCATCACAGTCACAGCAACAGCAGTTTTGCAAAACAAGGTCTCCTATTATTTCAAGAAATAGAGGACCAACAACACCACACAAGTTTTTGATTAAATCTCCACCTTCAAACTCCAAAGTCAAGATCAAAAGCACTACAACTGTGTCTATTTCACCCACAAGACTTGCAAGTTTGAGCAAGAATTCTCCAAAAAGATCGACTGCGGCTAAATTCCGTCGATCTTTCTCTCCTTCGAGACTAGCTACCAGGTTAGTTTCACCATTAAGGAGCAAGAAAACTGCACAGAAAAGTGATGGAATTGTAAGTGGACTGAAACAGCGCCCAGTATCAACAGTTCAATTCCCTTCTAGTAGAAGAATTTAA

Protein sequence

>Msa0091360

MVARTPPKLKRTLAALNPVLIRETLNKVDQCMARLQELQNTATGGNKVVSGVNLSPRSTIGYLKTSLRCKQESLRVKNGATRKSPVGKFPSTPNTGEWRRMLLPAMLVGETLGEILQASQFAREIVSAVGDKTPSKDDPKTPMSQRPSKKINLENTQLKSRRKKEKQTKLHNDGSPSLQRARSRITFKVSPPKVKEFDRESNKYLSSANRVSPRNRPWAKKTVLFPNPLFKSTQCSSSQSQQQQFCKTRSPIISRNRGPTTPHKFLIKSPPSNSKVKIKSTTTVSISPTRLASLSKNSPKRSTAAKFRRSFSPSRLATRLVSPLRSKKTAQKSDGIVSGLKQRPVSTVQFPSSRRI*