Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0094210 | XP_013450311.1 | 98.068 | 207 | 3 | 1 | 1 | 207 | 1 | 206 | 1.43e-146 | 416 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0094210 | sp|O65731|RS5_CICAR | 93.333 | 195 | 13 | 0 | 13 | 207 | 3 | 197 | 2.98e-133 | 374 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0094210 | I3SKT5 | 98.068 | 207 | 3 | 1 | 1 | 207 | 1 | 206 | 6.84e-147 | 416 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003330 | Msa0094210 | 0.817215 | 3.701536e-52 | -8.615850e-47 |
| Msa0027590 | Msa0094210 | 0.835221 | 1.903200e-56 | -8.615850e-47 |
| Msa0040220 | Msa0094210 | 0.801615 | 8.280829e-49 | -8.615850e-47 |
| Msa0042510 | Msa0094210 | 0.822549 | 2.232420e-53 | -8.615850e-47 |
| Msa0079560 | Msa0094210 | 0.808634 | 2.812140e-50 | -8.615850e-47 |
| Msa0094210 | Msa0132460 | 0.812458 | 4.196972e-51 | -8.615850e-47 |
| Msa0094210 | Msa0134580 | 0.816619 | 5.036412e-52 | -8.615850e-47 |
| Msa0094210 | Msa0168320 | 0.818881 | 1.554894e-52 | -8.615850e-47 |
| Msa0094210 | Msa0182050 | 0.818726 | 1.686103e-52 | -8.615850e-47 |
| Msa0094210 | Msa0182100 | 0.802429 | 5.634127e-49 | -8.615850e-47 |
| Msa0094210 | Msa0188740 | 0.803236 | 3.837963e-49 | -8.615850e-47 |
| Msa0094210 | Msa0191450 | 0.821798 | 3.333278e-53 | -8.615850e-47 |
| Msa0094210 | Msa0191550 | 0.811199 | 7.890701e-51 | -8.615850e-47 |
| Msa0094210 | Msa0192300 | 0.818532 | 1.865897e-52 | -8.615850e-47 |
| Msa0094210 | Msa0195030 | 0.812285 | 4.577421e-51 | -8.615850e-47 |
| Msa0094210 | Msa0233550 | 0.840249 | 9.741305e-58 | -8.615850e-47 |
| Msa0094210 | Msa0239420 | 0.817396 | 3.369531e-52 | -8.615850e-47 |
| Msa0094210 | Msa0243750 | 0.838845 | 2.257498e-57 | -8.615850e-47 |
| Msa0094210 | Msa0274940 | 0.807984 | 3.868937e-50 | -8.615850e-47 |
| Msa0094210 | Msa0282290 | 0.834805 | 2.424157e-56 | -8.615850e-47 |
| Msa0094210 | Msa0301250 | 0.825292 | 5.075898e-54 | -8.615850e-47 |
| Msa0094210 | Msa0313060 | 0.812103 | 5.017228e-51 | -8.615850e-47 |
| Msa0094210 | Msa0315660 | 0.802829 | 4.658119e-49 | -8.615850e-47 |
| Msa0094210 | Msa0371490 | 0.841630 | 4.230270e-58 | -8.615850e-47 |
| Msa0094210 | Msa0382670 | 0.832364 | 9.861769e-56 | -8.615850e-47 |
| Msa0094210 | Msa0388520 | 0.864237 | 1.405100e-64 | -8.615850e-47 |
| Msa0094210 | Msa0426090 | 0.833318 | 5.711914e-56 | -8.615850e-47 |
| Msa0094210 | Msa0472480 | 0.842462 | 2.548075e-58 | -8.615850e-47 |
| Msa0094210 | Msa0481520 | 0.805054 | 1.606652e-49 | -8.615850e-47 |
| Msa0094210 | Msa0511760 | 0.815100 | 1.098809e-51 | -8.615850e-47 |
| Msa0094210 | Msa0547920 | 0.807147 | 5.826090e-50 | -8.615850e-47 |
| Msa0094210 | Msa0573550 | 0.848820 | 4.803933e-60 | -8.615850e-47 |
| Msa0094210 | Msa0578010 | 0.810705 | 1.009330e-50 | -8.615850e-47 |
| Msa0094210 | Msa0582070 | 0.964005 | 8.746348e-123 | -8.615850e-47 |
| Msa0094210 | Msa0597240 | 0.810343 | 1.208129e-50 | -8.615850e-47 |
| Msa0094210 | Msa0602900 | 0.800428 | 1.448178e-48 | -8.615850e-47 |
| Msa0094210 | Msa0619230 | 0.864956 | 8.370355e-65 | -8.615850e-47 |
| Msa0094210 | Msa0621190 | 0.834739 | 2.517918e-56 | -8.615850e-47 |
| Msa0094210 | Msa0656450 | 0.834784 | 2.452633e-56 | -8.615850e-47 |
| Msa0094210 | Msa0691760 | 0.810243 | 1.270129e-50 | -8.615850e-47 |
| Msa0094210 | Msa0700370 | 0.816629 | 5.010296e-52 | -8.615850e-47 |
| Msa0094210 | Msa0704860 | 0.822835 | 1.915365e-53 | -8.615850e-47 |
| Msa0094210 | Msa0708630 | 0.814175 | 1.761482e-51 | -8.615850e-47 |
| Msa0094210 | Msa0738420 | 0.832918 | 7.185622e-56 | -8.615850e-47 |
| Msa0094210 | Msa0759660 | 0.802115 | 6.537085e-49 | -8.615850e-47 |
| Msa0094210 | Msa0790450 | 0.803641 | 3.164583e-49 | -8.615850e-47 |
| Msa0094210 | Msa0880050 | 0.813502 | 2.477806e-51 | -8.615850e-47 |
| Msa0094210 | Msa0929700 | 0.833701 | 4.583946e-56 | -8.615850e-47 |
| Msa0094210 | Msa0929790 | 0.801913 | 7.195558e-49 | -8.615850e-47 |
| Msa0094210 | Msa0930360 | 0.847686 | 9.881713e-60 | -8.615850e-47 |
| Msa0094210 | Msa0930790 | 0.836995 | 6.748524e-57 | -8.615850e-47 |
| Msa0094210 | Msa1041680 | 0.808817 | 2.570434e-50 | -8.615850e-47 |
| Msa0094210 | Msa1052160 | 0.813064 | 3.092555e-51 | -8.615850e-47 |
| Msa0094210 | Msa1124980 | 0.822041 | 2.928092e-53 | -8.615850e-47 |
| Msa0094210 | Msa1144610 | 0.886580 | 3.023433e-72 | -8.615850e-47 |
| Msa0094210 | Msa1144630 | 0.875855 | 2.216363e-68 | -8.615850e-47 |
| Msa0094210 | Msa1165700 | 0.805736 | 1.155697e-49 | -8.615850e-47 |
| Msa0094210 | Msa1166570 | 0.810649 | 1.037563e-50 | -8.615850e-47 |
| Msa0094210 | Msa1166670 | 0.862855 | 3.769707e-64 | -8.615850e-47 |
| Msa0094210 | Msa1167360 | 0.821964 | 3.050592e-53 | -8.615850e-47 |
| Msa0094210 | Msa1206240 | 0.802175 | 6.356345e-49 | -8.615850e-47 |
| Msa0094210 | Msa1237040 | 0.808699 | 2.724327e-50 | -8.615850e-47 |
| Msa0094210 | Msa1245270 | 0.858198 | 9.713570e-63 | -8.615850e-47 |
| Msa0094210 | Msa1284800 | 0.841504 | 4.566293e-58 | -8.615850e-47 |
| Msa0094210 | Msa1317390 | 0.819641 | 1.044066e-52 | -8.615850e-47 |
| Msa0094210 | Msa1351020 | 0.845767 | 3.307249e-59 | -8.615850e-47 |
| Msa0094210 | Msa1363910 | 0.987916 | 5.143954e-172 | -8.615850e-47 |
| Msa0094210 | Msa1363930 | 0.877430 | 6.326249e-69 | -8.615850e-47 |
| Msa0094210 | Msa1387750 | 0.822291 | 2.563010e-53 | -8.615850e-47 |
| Msa0094210 | Msa1390760 | 0.861820 | 7.841708e-64 | -8.615850e-47 |
| Msa0094210 | Msa1413570 | 0.839044 | 2.005014e-57 | -8.615850e-47 |
| Msa0094210 | Msa1423050 | 0.813372 | 2.645950e-51 | -8.615850e-47 |
| Msa0094210 | Msa1432310 | 0.841023 | 6.110892e-58 | -8.615850e-47 |
| Msa0094210 | Msa1449160 | 0.954992 | 8.427788e-113 | -8.615850e-47 |
| Msa0094210 | Msa1450560 | 0.811506 | 6.767152e-51 | -8.615850e-47 |
| Msa0094210 | Msa1465700 | 0.803666 | 3.126726e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0094210 | MtrunA17_Chr7g0268431 | 98.068 | 207 | 3 | 1 | 1 | 207 | 1 | 206 | 1.32e-150 | 416 |
| Msa0094210 | MtrunA17_Chr1g0176261 | 94.737 | 209 | 7 | 3 | 1 | 207 | 33 | 239 | 7.11e-141 | 392 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0094210 | AT2G37270.1 | 88.557 | 201 | 22 | 1 | 8 | 207 | 7 | 207 | 6.29e-132 | 369 |
| Msa0094210 | AT2G37270.2 | 88.557 | 201 | 22 | 1 | 8 | 207 | 7 | 207 | 6.29e-132 | 369 |
| Msa0094210 | AT3G11940.1 | 89.529 | 191 | 20 | 0 | 17 | 207 | 17 | 207 | 2.40e-130 | 365 |
| Msa0094210 | AT3G11940.2 | 89.529 | 191 | 20 | 0 | 17 | 207 | 17 | 207 | 2.40e-130 | 365 |
Find 73 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAATATAAATACAAATCT+AGG | 0.236520 | 1_2:+77394355 | None:intergenic |
| CAGCTATGCGATCAAGAAAA+AGG | 0.316264 | 1_2:+77398046 | Msa0094210:intron |
| GCATCAACTATAACTTGAAT+TGG | 0.326315 | 1_2:-77395315 | None:intergenic |
| GAGCTTGACTTCGTTTAGAT+TGG | 0.348914 | 1_2:-77394589 | None:intergenic |
| TCCTCTTCGTCGTGTTAATC+AGG | 0.349057 | 1_2:+77397810 | Msa0094210:CDS |
| ACCAGTTGTTAGAAGATATA+TGG | 0.352278 | 1_2:-77397833 | None:intergenic |
| AGAGAAGATGCAACCAGAAT+TGG | 0.353281 | 1_2:+77397748 | Msa0094210:CDS |
| AACACGTCAGCTTGGAAAAC+TGG | 0.359904 | 1_2:-77398359 | None:intergenic |
| GTGCCCGTGAAGCTGCATTT+AGG | 0.361118 | 1_2:+77397854 | Msa0094210:CDS |
| TTGGATCTGCTGGAGTTGTT+AGG | 0.369348 | 1_2:+77397767 | Msa0094210:CDS |
| AGGAACATATGTTGCATGTT+TGG | 0.372138 | 1_2:-77395121 | None:intergenic |
| GCCAATCGTTAAGCATCATT+TGG | 0.372423 | 1_2:+77398092 | Msa0094210:exon |
| GAGGAAAATAAACCAGTAAA+AGG | 0.394902 | 1_2:-77398201 | None:intergenic |
| ATGGAGCTTTGACGACGTTC+AGG | 0.402177 | 1_2:+77394620 | Msa0094210:CDS |
| GCCATATATCTTCTAACAAC+TGG | 0.404354 | 1_2:+77397832 | Msa0094210:CDS |
| CGCGGCCGTCAGCTTCTCAC+TGG | 0.409187 | 1_2:-77394418 | None:intergenic |
| GGTACTCAAAGAAGCGCTTC+AGG | 0.411900 | 1_2:+77395157 | Msa0094210:CDS |
| AGCTTGACTTCGTTTAGATT+GGG | 0.412691 | 1_2:-77394588 | None:intergenic |
| CTTAGTCCATGACTGTTTCA+AGG | 0.413064 | 1_2:+77398260 | Msa0094210:three_prime_UTR |
| GAAAGAAACTCATGGCTGTT+AGG | 0.417495 | 1_2:+77395244 | Msa0094210:CDS |
| CAGATTACCGATCTGTCTCT+TGG | 0.434208 | 1_2:+77395075 | Msa0094210:intron |
| AGATTACCGATCTGTCTCTT+GGG | 0.440013 | 1_2:+77395076 | Msa0094210:intron |
| GCAACCAGAATTGGATCTGC+TGG | 0.442717 | 1_2:+77397757 | Msa0094210:CDS |
| GAAGGCAAAGCAAGAGTGAC+AGG | 0.449142 | 1_2:-77394384 | None:intergenic |
| TAGTTGATGCTGTCGTCAAC+AGG | 0.451278 | 1_2:+77395328 | Msa0094210:CDS |
| TGCTGGAGTTGTTAGGAGGC+AGG | 0.469034 | 1_2:+77397774 | Msa0094210:CDS |
| TGATGCTTAACGATTGGCCT+TGG | 0.471931 | 1_2:-77398087 | None:intergenic |
| AGATTGGGATCAACTTCGAC+TGG | 0.475242 | 1_2:-77394573 | None:intergenic |
| CTGCCAAGGGTTCATCCAAC+AGG | 0.475684 | 1_2:+77397923 | Msa0094210:CDS |
| ATTCTGGTTGCATCTTCTCT+AGG | 0.476377 | 1_2:-77397745 | None:intergenic |
| TCAATATAAATACAAATCTA+GGG | 0.483881 | 1_2:+77394356 | None:intergenic |
| TGTTCCTAAATGCAGCTTCA+CGG | 0.488373 | 1_2:-77397858 | None:intergenic |
| CTGTCTCTTGGGGATTACAT+TGG | 0.493111 | 1_2:+77395087 | Msa0094210:CDS |
| AACTCCAGCAGATCCAATTC+TGG | 0.495047 | 1_2:-77397761 | None:intergenic |
| TCCAAATGATGCTTAACGAT+TGG | 0.503018 | 1_2:-77398093 | None:intergenic |
| TAAGACAATTGCTGAATGCT+TGG | 0.507627 | 1_2:+77397882 | Msa0094210:CDS |
| TCAGCTTGGAAAACTGGTAT+TGG | 0.512119 | 1_2:-77398353 | None:intergenic |
| GTTCCTAAATGCAGCTTCAC+GGG | 0.512374 | 1_2:-77397857 | None:intergenic |
| AGTTGTTAGGAGGCAGGCTG+TGG | 0.516790 | 1_2:+77397780 | Msa0094210:CDS |
| ACATATGTTCCTCACACTGC+TGG | 0.521105 | 1_2:+77395132 | Msa0094210:CDS |
| GGGGATTACATTGGAGCAAG+AGG | 0.537561 | 1_2:+77395096 | Msa0094210:CDS |
| AATACTTCAACACGTCAGCT+TGG | 0.541551 | 1_2:-77398367 | None:intergenic |
| TTAGTGAGCCTCTCAACAAT+GGG | 0.543323 | 1_2:-77395192 | None:intergenic |
| TGAGATTGAGAGAGTTGCCA+AGG | 0.553654 | 1_2:+77398070 | Msa0094210:CDS |
| GAACGTCGTCAAAGCTCCAT+TGG | 0.555775 | 1_2:-77394617 | None:intergenic |
| ATACCTGTTGGATGAACCCT+TGG | 0.559348 | 1_2:-77397926 | None:intergenic |
| GATCTGCTGGAGTTGTTAGG+AGG | 0.561323 | 1_2:+77397770 | Msa0094210:CDS |
| TGAACTCATTAACGCTGCCA+AGG | 0.562075 | 1_2:+77397909 | Msa0094210:CDS |
| GTTAGTGAGCCTCTCAACAA+TGG | 0.562680 | 1_2:-77395193 | None:intergenic |
| AAGTCAAGCTCTTCAACCAA+TGG | 0.580728 | 1_2:+77394601 | Msa0094210:CDS |
| CGATGGTTGAAATGATATGC+TGG | 0.590544 | 1_2:+77398410 | Msa0094210:three_prime_UTR |
| CTCAGTGTCCCATTGTTGAG+AGG | 0.591866 | 1_2:+77395184 | Msa0094210:CDS |
| AATGATCCTTGAAACAGTCA+TGG | 0.599615 | 1_2:-77398266 | None:intergenic |
| ACAAGTCAATTCAACGTGAG+AGG | 0.604212 | 1_2:-77398220 | None:intergenic |
| TTAAATAAAGATGTAATACA+AGG | 0.605416 | 1_2:-77398151 | None:intergenic |
| GATTGGGATCAACTTCGACT+GGG | 0.607523 | 1_2:-77394572 | None:intergenic |
| GCCGCGCCGCACTATCTACA+AGG | 0.608102 | 1_2:+77394435 | Msa0094210:five_prime_UTR |
| GATTACCGATCTGTCTCTTG+GGG | 0.611070 | 1_2:+77395077 | Msa0094210:intron |
| GTAATCCCCAAGAGACAGAT+CGG | 0.613626 | 1_2:-77395082 | None:intergenic |
| GAACTCATTAACGCTGCCAA+GGG | 0.615553 | 1_2:+77397910 | Msa0094210:CDS |
| ATGATGCACGGCAGAAACAA+CGG | 0.618587 | 1_2:+77395222 | Msa0094210:CDS |
| TAGGATCATTAAGCATGCCA+TGG | 0.620948 | 1_2:+77395263 | Msa0094210:CDS |
| AGCGACGGTTTCATCAGCCA+TGG | 0.634868 | 1_2:-77394547 | None:intergenic |
| TAGCAAGTGAATGATCTCCA+TGG | 0.641966 | 1_2:-77395280 | None:intergenic |
| AAACAACGGAAAGAAACTCA+TGG | 0.646751 | 1_2:+77395236 | Msa0094210:CDS |
| ATGTTCCTCACACTGCTGGT+AGG | 0.649707 | 1_2:+77395136 | Msa0094210:CDS |
| ACTAACTCTCTCATGATGCA+CGG | 0.651624 | 1_2:+77395210 | Msa0094210:CDS |
| GCCTGATTAACACGACGAAG+AGG | 0.651878 | 1_2:-77397811 | None:intergenic |
| AAGCTACCTTGTAGATAGTG+CGG | 0.671061 | 1_2:-77394441 | None:intergenic |
| AACTTCGACTGGGATAGCGA+CGG | 0.675722 | 1_2:-77394562 | None:intergenic |
| AAGGCAAAGCAAGAGTGACA+GGG | 0.684074 | 1_2:-77394383 | None:intergenic |
| GAGTACCTACCAGCAGTGTG+AGG | 0.691601 | 1_2:-77395141 | None:intergenic |
| ACCTTGTAGATAGTGCGGCG+CGG | 0.782232 | 1_2:-77394436 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGTTGAATTATTATTAAT+TGG | + | chr1_2:77396022-77396041 | Msa0094210:intron | 10.0% |
| !!! | TTTCAATAAATATTTTATCT+TGG | + | chr1_2:77396610-77396629 | Msa0094210:intron | 10.0% |
| !!! | AATACTTTTTTGAATATTTA+AGG | + | chr1_2:77397356-77397375 | Msa0094210:intron | 10.0% |
| !!! | ATACTTTTTTGAATATTTAA+GGG | + | chr1_2:77397357-77397376 | Msa0094210:intron | 10.0% |
| !!! | AATTATATTATTTTATGTAG+TGG | + | chr1_2:77397721-77397740 | Msa0094210:intron | 10.0% |
| !!! | GCTATTTTCATAATTTATAT+TGG | + | chr1_2:77394849-77394868 | Msa0094210:intron | 15.0% |
| !!! | ATAAATCAACTTGAATTTTT+TGG | + | chr1_2:77395661-77395680 | Msa0094210:intron | 15.0% |
| !!! | TGTTTTTAAATTGTTAAAAC+TGG | + | chr1_2:77396056-77396075 | Msa0094210:intron | 15.0% |
| !!! | GTTTTTAAATTGTTAAAACT+GGG | + | chr1_2:77396057-77396076 | Msa0094210:intron | 15.0% |
| !! | AATTTATCTGTTTACATATA+GGG | - | chr1_2:77396790-77396809 | None:intergenic | 15.0% |
| !! | TAATTTATCTGTTTACATAT+AGG | - | chr1_2:77396791-77396810 | None:intergenic | 15.0% |
| !!! | AAACTTTAAAGATTGAATAA+TGG | - | chr1_2:77397956-77397975 | None:intergenic | 15.0% |
| !!! | TGATGAGAAATATTTTATTT+TGG | + | chr1_2:77398127-77398146 | Msa0094210:three_prime_UTR | 15.0% |
| !! | TTAAATAAAGATGTAATACA+AGG | - | chr1_2:77398154-77398173 | None:intergenic | 15.0% |
| !! | ACTTACTAAAAAAACCATTA+AGG | - | chr1_2:77394994-77395013 | None:intergenic | 20.0% |
| !! | GTCAATATATATCAATCATA+GGG | - | chr1_2:77395384-77395403 | None:intergenic | 20.0% |
| !! | AGTCAATATATATCAATCAT+AGG | - | chr1_2:77395385-77395404 | None:intergenic | 20.0% |
| !! | AATAATATGAAACAGATCAA+TGG | - | chr1_2:77395462-77395481 | None:intergenic | 20.0% |
| !!! | TTGAAATTGAATTTTTGATG+CGG | + | chr1_2:77395481-77395500 | Msa0094210:intron | 20.0% |
| !!! | ATGATTATTTGTTTTCCTAT+TGG | + | chr1_2:77395541-77395560 | Msa0094210:intron | 20.0% |
| !!! | ATTTTAATAAAACAAAGTCC+AGG | - | chr1_2:77395887-77395906 | None:intergenic | 20.0% |
| !! | TCACTTATACATAACAAATA+AGG | - | chr1_2:77396189-77396208 | None:intergenic | 20.0% |
| !! | GTATAAGTGATCAAATATAT+AGG | + | chr1_2:77396199-77396218 | Msa0094210:intron | 20.0% |
| !! | TTTATAGCATTATAACTACA+TGG | - | chr1_2:77396247-77396266 | None:intergenic | 20.0% |
| !!! | ATGCTATAAATATTTTGTGA+TGG | + | chr1_2:77396257-77396276 | Msa0094210:intron | 20.0% |
| !!! | TGTTTTGTGATCAAATATAT+AGG | + | chr1_2:77396282-77396301 | Msa0094210:intron | 20.0% |
| !! | TTTATAGCATTATAACTACA+TGG | - | chr1_2:77396247-77396266 | None:intergenic | 20.0% |
| !!! | ATGCTATAAATATTTTGTGA+TGG | + | chr1_2:77396257-77396276 | Msa0094210:intron | 20.0% |
| !! | GATTACAATATGACAAAATA+AGG | - | chr1_2:77396574-77396593 | None:intergenic | 20.0% |
| !! | TGTCATATTGTAATCAAATT+TGG | + | chr1_2:77396579-77396598 | Msa0094210:intron | 20.0% |
| !! | GTCATATTGTAATCAAATTT+GGG | + | chr1_2:77396580-77396599 | Msa0094210:intron | 20.0% |
| !! | TCATATTGTAATCAAATTTG+GGG | + | chr1_2:77396581-77396600 | Msa0094210:intron | 20.0% |
| !! | GATTACAATATGACAAAATA+AGG | - | chr1_2:77396574-77396593 | None:intergenic | 20.0% |
| !!! | TAATTGTTTGTTTTTTTCCT+CGG | + | chr1_2:77397153-77397172 | Msa0094210:intron | 20.0% |
| !! | ATGATTTATTATTTCCCTAT+TGG | + | chr1_2:77396773-77396792 | Msa0094210:intron | 20.0% |
| !! | TATTAACAATTAACTGTGTA+TGG | + | chr1_2:77397556-77397575 | Msa0094210:intron | 20.0% |
| !!! | AACATTGTTGTTTTTAAACA+TGG | + | chr1_2:77398172-77398191 | Msa0094210:three_prime_UTR | 20.0% |
| !!! | TTTTTACATTTCTGCTATTT+AGG | + | chr1_2:77398316-77398335 | Msa0094210:three_prime_UTR | 20.0% |
| ! | TAATTCAATGATTAGGGTTA+GGG | - | chr1_2:77394518-77394537 | None:intergenic | 25.0% |
| ! | ATAATTCAATGATTAGGGTT+AGG | - | chr1_2:77394519-77394538 | None:intergenic | 25.0% |
| ! | CGTGAATAATTCAATGATTA+GGG | - | chr1_2:77394524-77394543 | None:intergenic | 25.0% |
| !!! | TATTTTCAAGTAACTCATGT+CGG | + | chr1_2:77394935-77394954 | Msa0094210:intron | 25.0% |
| ! | TCAAATAAGCCAATCTAAAT+AGG | + | chr1_2:77394967-77394986 | Msa0094210:intron | 25.0% |
| ! | GAAAAAAGTGACAAATGATA+AGG | - | chr1_2:77395619-77395638 | None:intergenic | 25.0% |
| !!! | TTAAGAATTTTGACAATGCA+TGG | + | chr1_2:77395700-77395719 | Msa0094210:intron | 25.0% |
| ! | TTGTTTATTCTCACTTTGTT+TGG | + | chr1_2:77395978-77395997 | Msa0094210:intron | 25.0% |
| ! | GATGATTTATTGTTTCCTAT+TGG | + | chr1_2:77396112-77396131 | Msa0094210:intron | 25.0% |
| ! | TGATTAATACTTGATAGAGA+AGG | + | chr1_2:77396385-77396404 | Msa0094210:intron | 25.0% |
| !!! | ACTATTTTAGCTGTTAAGAT+TGG | + | chr1_2:77396441-77396460 | Msa0094210:intron | 25.0% |
| !!! | CTATTTTAGCTGTTAAGATT+GGG | + | chr1_2:77396442-77396461 | Msa0094210:intron | 25.0% |
| !!! | TATTTTAGCTGTTAAGATTG+GGG | + | chr1_2:77396443-77396462 | Msa0094210:intron | 25.0% |
| !!! | GATGATTTTTTGTTTCCTAT+TGG | + | chr1_2:77396497-77396516 | Msa0094210:intron | 25.0% |
| ! | AGTAATCAATTAATCATGCA+TGG | + | chr1_2:77396634-77396653 | Msa0094210:intron | 25.0% |
| !! | GTAATTTTTACTTGTACGAA+AGG | + | chr1_2:77396679-77396698 | Msa0094210:intron | 25.0% |
| ! | TAAATCATCATTTCATTCTC+CGG | - | chr1_2:77396101-77396120 | None:intergenic | 25.0% |
| !!! | AAGTTTGAAATCTTTTCTTG+TGG | + | chr1_2:77397192-77397211 | Msa0094210:intron | 25.0% |
| ! | ATTGAAAGGAGAAAATGAAA+TGG | - | chr1_2:77397511-77397530 | None:intergenic | 25.0% |
| ! | CGAGAAACAAATTGTAAATA+AGG | + | chr1_2:77397602-77397621 | Msa0094210:intron | 25.0% |
| ! | TTAATTCAAAGCAAAAACTG+AGG | + | chr1_2:77397642-77397661 | Msa0094210:intron | 25.0% |
| ! | ACATATCCTAAAACTAAAAC+TGG | - | chr1_2:77397687-77397706 | None:intergenic | 25.0% |
| !! | CTTTAAAGATTGAATAATGG+TGG | - | chr1_2:77397953-77397972 | None:intergenic | 25.0% |
| ! | AGAAAACAAATTCAGTACAT+TGG | - | chr1_2:77397979-77397998 | None:intergenic | 25.0% |
| GCGTGAATAATTCAATGATT+AGG | - | chr1_2:77394525-77394544 | None:intergenic | 30.0% | |
| CATTAAGGACCTATTTAGAT+TGG | - | chr1_2:77394979-77394998 | None:intergenic | 30.0% | |
| CAATCTAAATAGGTCCTTAA+TGG | + | chr1_2:77394977-77394996 | Msa0094210:intron | 30.0% | |
| GCATCAACTATAACTTGAAT+TGG | - | chr1_2:77395318-77395337 | None:intergenic | 30.0% | |
| GGGAAAATAACAAAATGCAA+AGG | - | chr1_2:77395364-77395383 | None:intergenic | 30.0% | |
| CTGCTTAATATGTCTTGATT+TGG | + | chr1_2:77395507-77395526 | Msa0094210:intron | 30.0% | |
| !! | ATATGTCTTGATTTGGAGAA+TGG | + | chr1_2:77395514-77395533 | Msa0094210:intron | 30.0% |
| ATTCAGGTATTCAAACCAAT+AGG | - | chr1_2:77395559-77395578 | None:intergenic | 30.0% | |
| TACAAAAAATGCCATCATTC+AGG | - | chr1_2:77395575-77395594 | None:intergenic | 30.0% | |
| TTGATTTACTGTTTCCCTAT+TGG | + | chr1_2:77395810-77395829 | Msa0094210:intron | 30.0% | |
| ACATGCATTATTACTGTTGA+GGG | - | chr1_2:77395914-77395933 | None:intergenic | 30.0% | |
| ATACAAAAACGTCATCATCT+AGG | - | chr1_2:77396146-77396165 | None:intergenic | 30.0% | |
| AATACTTGATAGAGAAGGAT+AGG | + | chr1_2:77396390-77396409 | Msa0094210:intron | 30.0% | |
| !!! | ATTTTAGCTGTTAAGATTGG+GGG | + | chr1_2:77396444-77396463 | Msa0094210:intron | 30.0% |
| !! | TTGTTTCCTATTGGTTTGAT+TGG | + | chr1_2:77396121-77396140 | Msa0094210:intron | 30.0% |
| ATTAAAGCAGTAAAGTGTGA+AGG | + | chr1_2:77396824-77396843 | Msa0094210:intron | 30.0% | |
| ACAGCCATAGTTATCAATAT+TGG | + | chr1_2:77396998-77397017 | Msa0094210:intron | 30.0% | |
| CAGCCATAGTTATCAATATT+GGG | + | chr1_2:77396999-77397018 | Msa0094210:intron | 30.0% | |
| ! | CAACCCAATATTGATAACTA+TGG | - | chr1_2:77397005-77397024 | None:intergenic | 30.0% |
| TCAGATAGAGCTAATACAAA+AGG | - | chr1_2:77395589-77395608 | None:intergenic | 30.0% | |
| ATCTTGCATCATTACTACAA+GGG | - | chr1_2:77397128-77397147 | None:intergenic | 30.0% | |
| AATCTTGCATCATTACTACA+AGG | - | chr1_2:77397129-77397148 | None:intergenic | 30.0% | |
| TCCTAAAACTAAAACTGGTT+GGG | - | chr1_2:77397682-77397701 | None:intergenic | 30.0% | |
| ATCCTAAAACTAAAACTGGT+TGG | - | chr1_2:77397683-77397702 | None:intergenic | 30.0% | |
| ACCAGTTGTTAGAAGATATA+TGG | - | chr1_2:77397836-77397855 | None:intergenic | 30.0% | |
| !! | GTACTGAATTTGTTTTCTCA+TGG | + | chr1_2:77397981-77398000 | Msa0094210:intron | 30.0% |
| GAGGAAAATAAACCAGTAAA+AGG | - | chr1_2:77398204-77398223 | None:intergenic | 30.0% | |
| GAAATGTAAAAAATCACAGG+TGG | - | chr1_2:77398308-77398327 | None:intergenic | 30.0% | |
| GCAGAAATGTAAAAAATCAC+AGG | - | chr1_2:77398311-77398330 | None:intergenic | 30.0% | |
| !!! | TTGTTGATTTTCATAGTCGA+TGG | + | chr1_2:77398393-77398412 | Msa0094210:three_prime_UTR | 30.0% |
| !!! | TCACTGGTTTTTAGTTCTGA+AGG | - | chr1_2:77394405-77394424 | None:intergenic | 35.0% |
| AGCTTGACTTCGTTTAGATT+GGG | - | chr1_2:77394591-77394610 | None:intergenic | 35.0% | |
| !! | CAAACAGGGCTTATTTCTAT+AGG | - | chr1_2:77394748-77394767 | None:intergenic | 35.0% |
| CTATAGAAATAAGCCCTGTT+TGG | + | chr1_2:77394746-77394765 | Msa0094210:intron | 35.0% | |
| ACAAGTTGTTCATCCAAACA+GGG | - | chr1_2:77394762-77394781 | None:intergenic | 35.0% | |
| AACAAGTTGTTCATCCAAAC+AGG | - | chr1_2:77394763-77394782 | None:intergenic | 35.0% | |
| AGGAACATATGTTGCATGTT+TGG | - | chr1_2:77395124-77395143 | None:intergenic | 35.0% | |
| AAACAACGGAAAGAAACTCA+TGG | + | chr1_2:77395236-77395255 | Msa0094210:CDS | 35.0% | |
| TGGTTTGAATACCTGAATGA+TGG | + | chr1_2:77395561-77395580 | Msa0094210:intron | 35.0% | |
| GTGACAAATGATAAGGAGAA+TGG | - | chr1_2:77395612-77395631 | None:intergenic | 35.0% | |
| ATACAAAAATGCCATCATGC+AGG | - | chr1_2:77395844-77395863 | None:intergenic | 35.0% | |
| CACATGCATTATTACTGTTG+AGG | - | chr1_2:77395915-77395934 | None:intergenic | 35.0% | |
| ATCTAGGCAATCAAACCAAT+AGG | - | chr1_2:77396130-77396149 | None:intergenic | 35.0% | |
| !! | TAGGTGGGTTGGTTATTAAT+TGG | + | chr1_2:77396409-77396428 | Msa0094210:intron | 35.0% |
| ATCTAGCCAATCAAACCAAT+AGG | - | chr1_2:77396515-77396534 | None:intergenic | 35.0% | |
| !!! | TACAACTAGCTTTTGATTGC+TGG | + | chr1_2:77396733-77396752 | Msa0094210:intron | 35.0% |
| AATTGTCACAGCTTAAGCTT+TGG | + | chr1_2:77396968-77396987 | Msa0094210:intron | 35.0% | |
| TCTTGCATCATTACTACAAG+GGG | - | chr1_2:77397127-77397146 | None:intergenic | 35.0% | |
| TTAAGCAATAAACATCACCG+AGG | - | chr1_2:77397173-77397192 | None:intergenic | 35.0% | |
| ! | GAAATCTTTTCTTGTGGTAG+AGG | + | chr1_2:77397198-77397217 | Msa0094210:intron | 35.0% |
| AATACAAAATGCCATCATCC+AGG | - | chr1_2:77397307-77397326 | None:intergenic | 35.0% | |
| AATCCTACCCAAATTACACA+CGG | - | chr1_2:77397417-77397436 | None:intergenic | 35.0% | |
| TCTCAGCACATAACATTGAA+AGG | - | chr1_2:77397525-77397544 | None:intergenic | 35.0% | |
| !!! | TCCCAACCAGTTTTAGTTTT+AGG | + | chr1_2:77397678-77397697 | Msa0094210:intron | 35.0% |
| GCCATATATCTTCTAACAAC+TGG | + | chr1_2:77397832-77397851 | Msa0094210:CDS | 35.0% | |
| TAAGACAATTGCTGAATGCT+TGG | + | chr1_2:77397882-77397901 | Msa0094210:CDS | 35.0% | |
| AATAATGGTGGTATACCTGT+TGG | - | chr1_2:77397941-77397960 | None:intergenic | 35.0% | |
| ! | CTCATGGATTTTTCCTTGTT+TGG | + | chr1_2:77397997-77398016 | Msa0094210:intron | 35.0% |
| TGTTAGCAAAGAACCAAACA+AGG | - | chr1_2:77398013-77398032 | None:intergenic | 35.0% | |
| TCCAAATGATGCTTAACGAT+TGG | - | chr1_2:77398096-77398115 | None:intergenic | 35.0% | |
| ! | ACATGGTGTAAACCTTTTAC+TGG | + | chr1_2:77398189-77398208 | Msa0094210:three_prime_UTR | 35.0% |
| AATGATCCTTGAAACAGTCA+TGG | - | chr1_2:77398269-77398288 | None:intergenic | 35.0% | |
| AAAAACCAGTGAGAAGCTGA+CGG | + | chr1_2:77394413-77394432 | Msa0094210:five_prime_UTR | 40.0% | |
| AAGCTACCTTGTAGATAGTG+CGG | - | chr1_2:77394444-77394463 | None:intergenic | 40.0% | |
| GTTAACGAGAGAGATGAAGA+AGG | - | chr1_2:77394492-77394511 | None:intergenic | 40.0% | |
| TTGAATTATTCACGCAGCCA+TGG | + | chr1_2:77394530-77394549 | Msa0094210:intron | 40.0% | |
| GAGCTTGACTTCGTTTAGAT+TGG | - | chr1_2:77394592-77394611 | None:intergenic | 40.0% | |
| AAGTCAAGCTCTTCAACCAA+TGG | + | chr1_2:77394601-77394620 | Msa0094210:CDS | 40.0% | |
| AGATTACCGATCTGTCTCTT+GGG | + | chr1_2:77395076-77395095 | Msa0094210:intron | 40.0% | |
| TTAGTGAGCCTCTCAACAAT+GGG | - | chr1_2:77395195-77395214 | None:intergenic | 40.0% | |
| ACTAACTCTCTCATGATGCA+CGG | + | chr1_2:77395210-77395229 | Msa0094210:CDS | 40.0% | |
| GAAAGAAACTCATGGCTGTT+AGG | + | chr1_2:77395244-77395263 | Msa0094210:CDS | 40.0% | |
| TAGGATCATTAAGCATGCCA+TGG | + | chr1_2:77395263-77395282 | Msa0094210:CDS | 40.0% | |
| TAGCAAGTGAATGATCTCCA+TGG | - | chr1_2:77395283-77395302 | None:intergenic | 40.0% | |
| ACCTACTTACTCATCCGAAT+CGG | + | chr1_2:77395775-77395794 | Msa0094210:intron | 40.0% | |
| ! | AACTTTTCATCCTCCCGATT+CGG | - | chr1_2:77395792-77395811 | None:intergenic | 40.0% |
| TGCAGGCAATCAAACCAATA+GGG | - | chr1_2:77395827-77395846 | None:intergenic | 40.0% | |
| ATGCAGGCAATCAAACCAAT+AGG | - | chr1_2:77395828-77395847 | None:intergenic | 40.0% | |
| ! | GAGCTGTTGATTGTTTGAAC+TGG | + | chr1_2:77396079-77396098 | Msa0094210:intron | 40.0% |
| ACTTGATAGAGAAGGATAGG+TGG | + | chr1_2:77396393-77396412 | Msa0094210:intron | 40.0% | |
| CTTGATAGAGAAGGATAGGT+GGG | + | chr1_2:77396394-77396413 | Msa0094210:intron | 40.0% | |
| ! | TGGTTTGATTGGCTAGATGA+TGG | + | chr1_2:77396517-77396536 | Msa0094210:intron | 40.0% |
| TACTTGTACGAAAGGAAAGC+AGG | + | chr1_2:77396687-77396706 | Msa0094210:intron | 40.0% | |
| !! | TAGCTTTTGATTGCTGGAAC+CGG | + | chr1_2:77396739-77396758 | Msa0094210:intron | 40.0% |
| !! | TCAATATTGGGTTGATAGCC+AGG | + | chr1_2:77397011-77397030 | Msa0094210:intron | 40.0% |
| AATACAAAAGGCCATCATCC+TGG | - | chr1_2:77397032-77397051 | None:intergenic | 40.0% | |
| TCCAGGCAATCAAACCAATA+GGG | - | chr1_2:77397290-77397309 | None:intergenic | 40.0% | |
| ATCCAGGCAATCAAACCAAT+AGG | - | chr1_2:77397291-77397310 | None:intergenic | 40.0% | |
| ATTACACACGGCATCATCTA+GGG | - | chr1_2:77397405-77397424 | None:intergenic | 40.0% | |
| AATTACACACGGCATCATCT+AGG | - | chr1_2:77397406-77397425 | None:intergenic | 40.0% | |
| AGATGATGCCGTGTGTAATT+TGG | + | chr1_2:77397406-77397425 | Msa0094210:intron | 40.0% | |
| GATGATGCCGTGTGTAATTT+GGG | + | chr1_2:77397407-77397426 | Msa0094210:intron | 40.0% | |
| TCAAAGCAAAAACTGAGGCT+TGG | + | chr1_2:77397647-77397666 | Msa0094210:intron | 40.0% | |
| ! | ATTCTGGTTGCATCTTCTCT+AGG | - | chr1_2:77397748-77397767 | None:intergenic | 40.0% |
| AGAGAAGATGCAACCAGAAT+TGG | + | chr1_2:77397748-77397767 | Msa0094210:CDS | 40.0% | |
| TGTTCCTAAATGCAGCTTCA+CGG | - | chr1_2:77397861-77397880 | None:intergenic | 40.0% | |
| CAGCTATGCGATCAAGAAAA+AGG | + | chr1_2:77398046-77398065 | Msa0094210:intron | 40.0% | |
| GCCAATCGTTAAGCATCATT+TGG | + | chr1_2:77398092-77398111 | Msa0094210:exon | 40.0% | |
| ACAAGTCAATTCAACGTGAG+AGG | - | chr1_2:77398223-77398242 | None:intergenic | 40.0% | |
| CTTAGTCCATGACTGTTTCA+AGG | + | chr1_2:77398260-77398279 | Msa0094210:three_prime_UTR | 40.0% | |
| TCAGCTTGGAAAACTGGTAT+TGG | - | chr1_2:77398356-77398375 | None:intergenic | 40.0% | |
| AATACTTCAACACGTCAGCT+TGG | - | chr1_2:77398370-77398389 | None:intergenic | 40.0% | |
| AAGGCAAAGCAAGAGTGACA+GGG | - | chr1_2:77394386-77394405 | None:intergenic | 45.0% | |
| GATTGGGATCAACTTCGACT+GGG | - | chr1_2:77394575-77394594 | None:intergenic | 45.0% | |
| AGATTGGGATCAACTTCGAC+TGG | - | chr1_2:77394576-77394595 | None:intergenic | 45.0% | |
| CAAGAGACAGATCGGTAATC+TGG | - | chr1_2:77395077-77395096 | None:intergenic | 45.0% | |
| CAGATTACCGATCTGTCTCT+TGG | + | chr1_2:77395075-77395094 | Msa0094210:intron | 45.0% | |
| GATTACCGATCTGTCTCTTG+GGG | + | chr1_2:77395077-77395096 | Msa0094210:intron | 45.0% | |
| GTAATCCCCAAGAGACAGAT+CGG | - | chr1_2:77395085-77395104 | None:intergenic | 45.0% | |
| CTGTCTCTTGGGGATTACAT+TGG | + | chr1_2:77395087-77395106 | Msa0094210:CDS | 45.0% | |
| ACATATGTTCCTCACACTGC+TGG | + | chr1_2:77395132-77395151 | Msa0094210:CDS | 45.0% | |
| GTTAGTGAGCCTCTCAACAA+TGG | - | chr1_2:77395196-77395215 | None:intergenic | 45.0% | |
| ATGATGCACGGCAGAAACAA+CGG | + | chr1_2:77395222-77395241 | Msa0094210:CDS | 45.0% | |
| ! | TAGTTGATGCTGTCGTCAAC+AGG | + | chr1_2:77395328-77395347 | Msa0094210:CDS | 45.0% |
| CCTACTTACTCATCCGAATC+GGG | + | chr1_2:77395776-77395795 | Msa0094210:intron | 45.0% | |
| TGGTTTGATTGCCTGCATGA+TGG | + | chr1_2:77395830-77395849 | Msa0094210:intron | 45.0% | |
| GCTCTATCTGATCATTCTCC+TGG | + | chr1_2:77395866-77395885 | Msa0094210:intron | 45.0% | |
| ATAGAGAAGGATAGGTGGGT+TGG | + | chr1_2:77396398-77396417 | Msa0094210:intron | 45.0% | |
| TAAGATTGGGGGCTGTTGAT+TGG | + | chr1_2:77396455-77396474 | Msa0094210:intron | 45.0% | |
| !! | TCCCTATTGGTTTGATTGCC+TGG | + | chr1_2:77395823-77395842 | Msa0094210:intron | 45.0% |
| TGGTTTGATTGCCTGGATGA+TGG | + | chr1_2:77397293-77397312 | Msa0094210:intron | 45.0% | |
| ATGCCGTGTGTAATTTGGGT+AGG | + | chr1_2:77397411-77397430 | Msa0094210:intron | 45.0% | |
| AACTCCAGCAGATCCAATTC+TGG | - | chr1_2:77397764-77397783 | None:intergenic | 45.0% | |
| TTGGATCTGCTGGAGTTGTT+AGG | + | chr1_2:77397767-77397786 | Msa0094210:CDS | 45.0% | |
| TCCTCTTCGTCGTGTTAATC+AGG | + | chr1_2:77397810-77397829 | Msa0094210:CDS | 45.0% | |
| GTTCCTAAATGCAGCTTCAC+GGG | - | chr1_2:77397860-77397879 | None:intergenic | 45.0% | |
| TGAACTCATTAACGCTGCCA+AGG | + | chr1_2:77397909-77397928 | Msa0094210:CDS | 45.0% | |
| GAACTCATTAACGCTGCCAA+GGG | + | chr1_2:77397910-77397929 | Msa0094210:CDS | 45.0% | |
| ATACCTGTTGGATGAACCCT+TGG | - | chr1_2:77397929-77397948 | None:intergenic | 45.0% | |
| TGAGATTGAGAGAGTTGCCA+AGG | + | chr1_2:77398070-77398089 | Msa0094210:CDS | 45.0% | |
| !! | TGATGCTTAACGATTGGCCT+TGG | - | chr1_2:77398090-77398109 | None:intergenic | 45.0% |
| AACACGTCAGCTTGGAAAAC+TGG | - | chr1_2:77398362-77398381 | None:intergenic | 45.0% | |
| GAAGGCAAAGCAAGAGTGAC+AGG | - | chr1_2:77394387-77394406 | None:intergenic | 50.0% | |
| AACTTCGACTGGGATAGCGA+CGG | - | chr1_2:77394565-77394584 | None:intergenic | 50.0% | |
| GAACGTCGTCAAAGCTCCAT+TGG | - | chr1_2:77394620-77394639 | None:intergenic | 50.0% | |
| ! | ATGGAGCTTTGACGACGTTC+AGG | + | chr1_2:77394620-77394639 | Msa0094210:CDS | 50.0% |
| GGGGATTACATTGGAGCAAG+AGG | + | chr1_2:77395096-77395115 | Msa0094210:CDS | 50.0% | |
| ATGTTCCTCACACTGCTGGT+AGG | + | chr1_2:77395136-77395155 | Msa0094210:CDS | 50.0% | |
| !! | GGTACTCAAAGAAGCGCTTC+AGG | + | chr1_2:77395157-77395176 | Msa0094210:CDS | 50.0% |
| CTCAGTGTCCCATTGTTGAG+AGG | + | chr1_2:77395184-77395203 | Msa0094210:CDS | 50.0% | |
| !! | CCCGATTCGGATGAGTAAGT+AGG | - | chr1_2:77395779-77395798 | None:intergenic | 50.0% |
| ACTTACTCATCCGAATCGGG+AGG | + | chr1_2:77395779-77395798 | Msa0094210:intron | 50.0% | |
| ! | ATTGGGGGCTGTTGATTGGT+TGG | + | chr1_2:77396459-77396478 | Msa0094210:intron | 50.0% |
| !! | TGGGTTGATAGCCAGGATGA+TGG | + | chr1_2:77397018-77397037 | Msa0094210:intron | 50.0% |
| GCAACCAGAATTGGATCTGC+TGG | + | chr1_2:77397757-77397776 | Msa0094210:CDS | 50.0% | |
| GATCTGCTGGAGTTGTTAGG+AGG | + | chr1_2:77397770-77397789 | Msa0094210:CDS | 50.0% | |
| GCCTGATTAACACGACGAAG+AGG | - | chr1_2:77397814-77397833 | None:intergenic | 50.0% | |
| ACCTTGTAGATAGTGCGGCG+CGG | - | chr1_2:77394439-77394458 | None:intergenic | 55.0% | |
| AGCGACGGTTTCATCAGCCA+TGG | - | chr1_2:77394550-77394569 | None:intergenic | 55.0% | |
| GAGTACCTACCAGCAGTGTG+AGG | - | chr1_2:77395144-77395163 | None:intergenic | 55.0% | |
| TGCTGGAGTTGTTAGGAGGC+AGG | + | chr1_2:77397774-77397793 | Msa0094210:CDS | 55.0% | |
| AGTTGTTAGGAGGCAGGCTG+TGG | + | chr1_2:77397780-77397799 | Msa0094210:CDS | 55.0% | |
| GTGCCCGTGAAGCTGCATTT+AGG | + | chr1_2:77397854-77397873 | Msa0094210:CDS | 55.0% | |
| CTGCCAAGGGTTCATCCAAC+AGG | + | chr1_2:77397923-77397942 | Msa0094210:CDS | 55.0% | |
| GCCGCGCCGCACTATCTACA+AGG | + | chr1_2:77394435-77394454 | Msa0094210:five_prime_UTR | 65.0% | |
| CGCGGCCGTCAGCTTCTCAC+TGG | - | chr1_2:77394421-77394440 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 77394368 | 77398432 | 77394368 | ID=Msa0094210;Name=Msa0094210 |
| chr1_2 | mRNA | 77394368 | 77398432 | 77394368 | ID=Msa0094210-mRNA-1;Parent=Msa0094210;Name=Msa0094210-mRNA-1;_AED=0.15;_eAED=0.15;_QI=91|1|1|1|0.75|0.6|5|329|207 |
| chr1_2 | exon | 77394368 | 77394456 | 77394368 | ID=Msa0094210-mRNA-1:exon:27431;Parent=Msa0094210-mRNA-1 |
| chr1_2 | exon | 77394547 | 77394641 | 77394547 | ID=Msa0094210-mRNA-1:exon:27432;Parent=Msa0094210-mRNA-1 |
| chr1_2 | exon | 77395078 | 77395349 | 77395078 | ID=Msa0094210-mRNA-1:exon:27433;Parent=Msa0094210-mRNA-1 |
| chr1_2 | exon | 77397741 | 77397944 | 77397741 | ID=Msa0094210-mRNA-1:exon:27434;Parent=Msa0094210-mRNA-1 |
| chr1_2 | exon | 77398049 | 77398432 | 77398049 | ID=Msa0094210-mRNA-1:exon:27435;Parent=Msa0094210-mRNA-1 |
| chr1_2 | five_prime_UTR | 77394368 | 77394456 | 77394368 | ID=Msa0094210-mRNA-1:five_prime_utr;Parent=Msa0094210-mRNA-1 |
| chr1_2 | five_prime_UTR | 77394547 | 77394548 | 77394547 | ID=Msa0094210-mRNA-1:five_prime_utr;Parent=Msa0094210-mRNA-1 |
| chr1_2 | CDS | 77394549 | 77394641 | 77394549 | ID=Msa0094210-mRNA-1:cds;Parent=Msa0094210-mRNA-1 |
| chr1_2 | CDS | 77395078 | 77395349 | 77395078 | ID=Msa0094210-mRNA-1:cds;Parent=Msa0094210-mRNA-1 |
| chr1_2 | CDS | 77397741 | 77397944 | 77397741 | ID=Msa0094210-mRNA-1:cds;Parent=Msa0094210-mRNA-1 |
| chr1_2 | CDS | 77398049 | 77398103 | 77398049 | ID=Msa0094210-mRNA-1:cds;Parent=Msa0094210-mRNA-1 |
| chr1_2 | three_prime_UTR | 77398104 | 77398432 | 77398104 | ID=Msa0094210-mRNA-1:three_prime_utr;Parent=Msa0094210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
