AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0614040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0614040 MtrunA17_Chr4g0049841 94.150 718 24 4 1 710 1 708 0.0 1296
Msa0614040 MtrunA17_Chr3g0117751 39.652 633 308 17 90 708 56 628 7.21e-134 409
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0614040 AT4G33630.1 51.172 725 292 11 5 709 1 683 0.0 629
Msa0614040 AT4G33630.2 51.172 725 292 11 5 709 1 683 0.0 629
Msa0614040 AT4G33630.3 51.172 725 292 11 5 709 1 683 0.0 629
Msa0614040 AT1G27510.1 36.513 608 324 11 111 708 94 649 3.84e-111 350

Find 211 sgRNAs with CRISPR-Local

Find 876 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTATCATCACCACTTTC+TGG 0.125978 4_2:+62954399 None:intergenic
AACAAGAAAATCACCATTTA+AGG 0.157206 4_2:+62953503 None:intergenic
GGCATAATTCCTGAAGAATT+TGG 0.184513 4_2:-62951584 Msa0614040:CDS
ACTTCATTTGATCCCTTAAA+TGG 0.216277 4_2:-62953516 Msa0614040:intron
CAGAATCATCAACCATTATC+TGG 0.244294 4_2:-62953570 Msa0614040:CDS
GGAAAATGATACAGAAATTC+TGG 0.265547 4_2:-62954133 Msa0614040:CDS
TTGCAGGTGGGTTGGTGGGC+TGG 0.268886 4_2:-62958062 Msa0614040:intron
GATTTCGTAGTTATGATAAA+TGG 0.276970 4_2:+62946541 None:intergenic
TTTCAACCAGGCTTATATAT+TGG 0.280789 4_2:-62953372 Msa0614040:intron
GAAGAAATGAGAAAGAAAAT+TGG 0.293381 4_2:+62959906 None:intergenic
AGTGAGGATGAAGATGAAAA+TGG 0.294516 4_2:-62954216 Msa0614040:CDS
CTGTTGTTGGATTTGTGTAT+TGG 0.301064 4_2:-62951169 Msa0614040:CDS
AATACTTAGCCAACCTTTGC+AGG 0.302638 4_2:+62953751 None:intergenic
AAGAAATGAGAAAGAAAATT+GGG 0.315174 4_2:+62959907 None:intergenic
TTTCAGATTGCTCGCTATAA+AGG 0.326758 4_2:-62951395 Msa0614040:intron
TGTTGTTGGATTTGTGTATT+GGG 0.328933 4_2:-62951168 Msa0614040:CDS
TTTACAAGTCTCTGATAGTA+TGG 0.336130 4_2:+62951081 None:intergenic
GATGATGGGATTGAGATAAA+TGG 0.342678 4_2:-62954072 Msa0614040:CDS
AAAATCGTTGACCCAGATAA+TGG 0.344302 4_2:+62953558 None:intergenic
AGATCCTTGTCCACTTTCTC+TGG 0.346027 4_2:+62954279 None:intergenic
TCTGATCTTGCAAAATTCAT+TGG 0.354439 4_2:-62953787 Msa0614040:CDS
GTAGAAGCCTTGAAAATAAC+CGG 0.354442 4_2:-62953240 Msa0614040:CDS
GATAAATCAATTAAGTTTCA+AGG 0.355553 4_2:-62953835 Msa0614040:CDS
GACCCTGCTGAGGGAATGCC+TGG 0.361051 4_2:-62954366 Msa0614040:CDS
ATCTCTAGGGGATAAATTGC+TGG 0.365355 4_2:+62953969 None:intergenic
GATGAAGATTTCCCTTTGTC+AGG 0.367167 4_2:+62953859 None:intergenic
CATACCACTCCAAATTCTTC+AGG 0.377189 4_2:+62951575 None:intergenic
GGCTTATATATTGGTGCATA+TGG 0.377913 4_2:-62953363 Msa0614040:CDS
GTGATAACTCTTCTCAAAGT+AGG 0.378563 4_2:-62958854 Msa0614040:CDS
GTCTTGAAAGATATGATTCC+GGG 0.385138 4_2:-62954333 Msa0614040:CDS
GCTCTTGCAGGTGGGTTGGT+GGG 0.385512 4_2:-62958066 Msa0614040:intron
ATGGTTTAGAGGACGTTGTT+GGG 0.389821 4_2:+62954499 None:intergenic
GTTTCATTATTCTTTCTGTT+AGG 0.395013 4_2:-62946495 Msa0614040:three_prime_UTR
GGACAAGGATCTAATGTCTA+AGG 0.396291 4_2:-62954268 Msa0614040:CDS
TGTCTTGAAAGATATGATTC+CGG 0.400457 4_2:-62954334 Msa0614040:CDS
GGCTCTTGCAGGTGGGTTGG+TGG 0.409055 4_2:-62958067 Msa0614040:intron
GAAGGAAGATTGGCAGAGCC+AGG 0.415294 4_2:-62951371 Msa0614040:CDS
TGATACAGAAATTCTGGATC+TGG 0.416518 4_2:-62954127 Msa0614040:CDS
GCCACATATCTTCCATGCTC+TGG 0.420165 4_2:+62957990 None:intergenic
ACCTGGCCAGCTGGTACATA+AGG 0.421124 4_2:+62953213 None:intergenic
ACTAGCATCCAATGGTTTAG+AGG 0.421647 4_2:+62954488 None:intergenic
ACGTTTGAGAGGGAAGGTTG+TGG 0.426003 4_2:+62959813 None:intergenic
ATTGAGATAAATGGTGATCT+TGG 0.435754 4_2:-62954063 Msa0614040:CDS
ATGGTTGATGATTCTGAGCC+TGG 0.437377 4_2:+62953577 None:intergenic
GCTTCGAGTTCCTGCTAAGC+TGG 0.437447 4_2:-62953944 Msa0614040:CDS
ACTGATCAAGAGGGAGATGA+TGG 0.443283 4_2:-62954087 Msa0614040:CDS
ATTCAAATGAGACGTAGATA+TGG 0.444516 4_2:-62953321 Msa0614040:CDS
TCCTTATGTACCAGCTGGCC+AGG 0.445356 4_2:-62953214 Msa0614040:intron
AGCTTAACTAATTATTATGA+AGG 0.449894 4_2:-62946697 Msa0614040:three_prime_UTR
ATAAAAGCAGGGCCTGTTGT+TGG 0.449972 4_2:-62951182 Msa0614040:CDS
GTGATGTTCACGATGATGAT+TGG 0.453507 4_2:-62959585 Msa0614040:CDS
GGTGAACTGGTGATTCTTGA+TGG 0.454622 4_2:-62951323 Msa0614040:CDS
TTCAAGACATTCTGAAATCC+AGG 0.456901 4_2:+62954348 None:intergenic
GGTGATTGAGGAATTATTTG+AGG 0.459479 4_2:-62954247 Msa0614040:CDS
CAGCTAACAATGACAGTGTT+GGG 0.460581 4_2:-62958880 Msa0614040:CDS
GGGTACCAACTTCCACATAA+AGG 0.460668 4_2:-62951605 Msa0614040:CDS
TGAAGAAGCTGCTAAGCTTA+AGG 0.463576 4_2:-62958918 Msa0614040:CDS
TCCTGCTAAGCTGGAGATCA+AGG 0.467768 4_2:-62953935 Msa0614040:CDS
TCCTTGATCTCCAGCTTAGC+AGG 0.470115 4_2:+62953934 None:intergenic
GTTCTTATATGATCTCGCTT+AGG 0.470416 4_2:-62959636 Msa0614040:CDS
AACAGAAAAGCCTGCAGTGA+TGG 0.470878 4_2:+62947097 None:intergenic
AGTGATAACTCCAGAGAAAG+TGG 0.472654 4_2:-62954289 Msa0614040:CDS
GTGGCATTTCGTGCAAAAGT+TGG 0.472710 4_2:-62951632 Msa0614040:CDS
CATCGAGGATTCTGAAACCC+TGG 0.475587 4_2:+62951353 None:intergenic
CTCTCCATTCTACGTATTGT+AGG 0.476206 4_2:-62946635 Msa0614040:three_prime_UTR
TTAAGAGATAAAGCTGGTGC+TGG 0.476388 4_2:-62958688 Msa0614040:CDS
ACCACCTACAATACGTAGAA+TGG 0.478458 4_2:+62946631 None:intergenic
CATGATATTACCTGGCCAGC+TGG 0.478968 4_2:+62953204 None:intergenic
ACCGGCGCTATTAAACAATT+CGG 0.479799 4_2:-62959658 Msa0614040:CDS
ATGCTCAGCGAATTCGTAAC+CGG 0.481082 4_2:-62959676 Msa0614040:CDS
ATACTTAGCCTAATGTGTAC+AGG 0.481197 4_2:-62946518 Msa0614040:three_prime_UTR
TTCACGATGATGATTGGGAT+TGG 0.481484 4_2:-62959579 Msa0614040:CDS
AGCTGGATGGTCCTGACAAA+GGG 0.483919 4_2:-62953870 Msa0614040:CDS
CAGAATCCTCGATGGGTTGA+CGG 0.484201 4_2:-62951344 Msa0614040:CDS
ATCCAGAAAGTGGTGATGAT+AGG 0.485466 4_2:-62954401 Msa0614040:CDS
TCAGGAATTATGCCTTTATG+TGG 0.485937 4_2:+62951593 None:intergenic
GGATAATGAGAAGACGTTCC+TGG 0.486464 4_2:+62959521 None:intergenic
AATCCAGGCATTCCCTCAGC+AGG 0.487795 4_2:+62954363 None:intergenic
TTTAAGGGATCAAATGAAGT+TGG 0.487879 4_2:+62953519 None:intergenic
CTGTGTACCTAAAGCGAAAA+GGG 0.489273 4_2:-62954536 Msa0614040:CDS
ATTGGCTCTTGCAGGTGGGT+TGG 0.489289 4_2:-62958070 Msa0614040:intron
CTATAAAGGTGAAGGAAGAT+TGG 0.490683 4_2:-62951381 Msa0614040:CDS
ATTTGAGGAAGAAGAGAGTG+AGG 0.490887 4_2:-62954232 Msa0614040:CDS
CAATCAAACTTAAGTGTACA+TGG 0.492027 4_2:+62946724 None:intergenic
CTTAACTAATTATTATGAAG+GGG 0.493313 4_2:-62946695 Msa0614040:three_prime_UTR
TCATTTCTTCGACCCCGCTA+TGG 0.496732 4_2:-62959893 Msa0614040:exon
TTATGCCTTTATGTGGAAGT+TGG 0.496915 4_2:+62951600 None:intergenic
ACAAGAAAATCACCATTTAA+GGG 0.498233 4_2:+62953504 None:intergenic
TGAAGGACGTTTGAGAGGGA+AGG 0.498944 4_2:+62959807 None:intergenic
GCTGTGTACCTAAAGCGAAA+AGG 0.499106 4_2:-62954537 Msa0614040:CDS
AATGGTTTAGAGGACGTTGT+TGG 0.499517 4_2:+62954498 None:intergenic
TCTAAACCATTGGATGCTAG+TGG 0.500108 4_2:-62954486 Msa0614040:CDS
GTAGCTGAATGGTGTGTGAT+TGG 0.502033 4_2:+62959951 None:intergenic
GTTGTGGTTGTCGTCGGAGA+CGG 0.502569 4_2:+62959741 None:intergenic
GAAGTGAAGGACGTTTGAGA+GGG 0.505956 4_2:+62959803 None:intergenic
GGATCTGGAAGACATTAAGT+TGG 0.507763 4_2:-62954112 Msa0614040:CDS
CTGGCGTCAGCATTTCGATC+AGG 0.508636 4_2:-62959551 Msa0614040:CDS
CAATACACAAATCCAACAAC+AGG 0.509155 4_2:+62951170 None:intergenic
AATGAAACCCTGTACACATT+AGG 0.509459 4_2:+62946510 None:intergenic
TGCTCAAAATCTAAGCTGCC+TGG 0.510120 4_2:+62946782 None:intergenic
GGAACTCGAAGCAAATCTCT+AGG 0.511114 4_2:+62953955 None:intergenic
TCGATGGGTTGACGGTGAAC+TGG 0.515941 4_2:-62951336 Msa0614040:CDS
TGTACTGTTGTGGTTGTCGT+CGG 0.518748 4_2:+62959735 None:intergenic
GAAATTGAAGAAGCCATAGC+GGG 0.519149 4_2:+62959880 None:intergenic
ACCGAATTGTTTAATAGCGC+CGG 0.519747 4_2:+62959657 None:intergenic
TTTCGTGCAAAAGTTGGAAA+GGG 0.520545 4_2:-62951626 Msa0614040:CDS
TCGGCTTAGGCTTCAACAGT+AGG 0.520867 4_2:-62951114 Msa0614040:exon
CGCCATCGTTTGTACTGTTG+TGG 0.522210 4_2:+62959725 None:intergenic
TGATGTTCACGATGATGATT+GGG 0.524545 4_2:-62959584 Msa0614040:CDS
AAAATCTTCACCTTCACACC+CGG 0.525389 4_2:+62954315 None:intergenic
AACAACGTCCTCTAAACCAT+TGG 0.527043 4_2:-62954496 Msa0614040:CDS
ATTGCTGTCAAAGTTGTCAT+TGG 0.527238 4_2:-62954012 Msa0614040:CDS
TGGCAAGGAGTTATAGTCCT+AGG 0.530789 4_2:-62957971 Msa0614040:intron
AGAAGTGAAGGACGTTTGAG+AGG 0.531857 4_2:+62959802 None:intergenic
TGATAACTCTTCTCAAAGTA+GGG 0.533441 4_2:-62958853 Msa0614040:CDS
AAAAGGTGACTTTAAGTCGC+AGG 0.534499 4_2:-62956596 Msa0614040:intron
TCTAATGTCTAAGGTGATTG+AGG 0.535692 4_2:-62954259 Msa0614040:CDS
GCTTAACTAATTATTATGAA+GGG 0.535910 4_2:-62946696 Msa0614040:three_prime_UTR
CAACTTGCAACATCTGCTGC+TGG 0.537244 4_2:-62956655 Msa0614040:CDS
CAGAGACATAACGGTTGAGA+AGG 0.539217 4_2:+62959772 None:intergenic
GCAGCTAACAATGACAGTGT+TGG 0.540513 4_2:-62958881 Msa0614040:CDS
TCTGTTGGTTCCAGGTTTCG+AGG 0.543210 4_2:-62947156 Msa0614040:intron
GATAAGTCTCACTCTAAGCC+AGG 0.543885 4_2:-62953595 Msa0614040:CDS
TGGTTTAGAGGACGTTGTTG+GGG 0.544662 4_2:+62954500 None:intergenic
TGAAAACGAAGTCAATCAGC+TGG 0.546784 4_2:-62953887 Msa0614040:CDS
CACACTATACAAATTGATGA+AGG 0.549481 4_2:+62946590 None:intergenic
GAACTCGAAGCAAATCTCTA+GGG 0.553123 4_2:+62953956 None:intergenic
GAAGGGAAGTGAAGAAGTGA+AGG 0.554186 4_2:+62959790 None:intergenic
GTTACGTCATGCTGTATATG+TGG 0.555743 4_2:-62958948 Msa0614040:CDS
TTTCGATCAGGTTGATGACC+AGG 0.559219 4_2:-62959539 Msa0614040:CDS
GCTGTCAAAGTTGTCATTGG+TGG 0.560173 4_2:-62954009 Msa0614040:CDS
GTGTAAGTGTTGTAGCTGAA+TGG 0.561230 4_2:+62959940 None:intergenic
ATTTCGTGCAAAAGTTGGAA+AGG 0.563212 4_2:-62951627 Msa0614040:CDS
AGAATCATCAACCATTATCT+GGG 0.563332 4_2:-62953569 Msa0614040:CDS
TGAGAGGGAAGGTTGTGGAG+AGG 0.564631 4_2:+62959818 None:intergenic
GTCAATGGCAAGAGGACGGT+AGG 0.565511 4_2:-62953299 Msa0614040:CDS
ACTGGTGATTCTTGATGGAA+AGG 0.566978 4_2:-62951318 Msa0614040:intron
ATGATTGGGATTGGAATCGC+TGG 0.567951 4_2:-62959570 Msa0614040:CDS
TCTTGCAAAATTCATTGGCA+AGG 0.568463 4_2:-62953782 Msa0614040:CDS
TTAACTAATTATTATGAAGG+GGG 0.571091 4_2:-62946694 Msa0614040:three_prime_UTR
TAAGTTGGAAACTGATCAAG+AGG 0.571150 4_2:-62954097 Msa0614040:CDS
CTGATCAAGAGGGAGATGAT+GGG 0.571236 4_2:-62954086 Msa0614040:CDS
ACGTCTTCTCATTATCCTCA+AGG 0.573451 4_2:-62959515 Msa0614040:intron
CGCTGAGCATCGAATCCCAC+CGG 0.573541 4_2:+62959689 None:intergenic
TGAGACGTAGATATGGTCAA+TGG 0.575070 4_2:-62953314 Msa0614040:CDS
CAGCTGGATGGTCCTGACAA+AGG 0.575602 4_2:-62953871 Msa0614040:CDS
GCAAGAGGACGGTAGGGCGA+AGG 0.581205 4_2:-62953292 Msa0614040:CDS
GCGACGGTAACAACCGCCGG+TGG 0.583150 4_2:-62959705 Msa0614040:CDS
GGGGATCCTTATGTACCAGC+TGG 0.584664 4_2:-62953219 Msa0614040:CDS
AGTGGTGATGATAGGAATGA+TGG 0.585157 4_2:-62954393 Msa0614040:CDS
AGCTGGTACATAAGGATCCC+CGG 0.585540 4_2:+62953221 None:intergenic
ATGGCGACGGTAACAACCGC+CGG 0.587272 4_2:-62959708 Msa0614040:CDS
AACGAAGTCAATCAGCTGGA+TGG 0.589327 4_2:-62953883 Msa0614040:CDS
GTGTAAAATAGCTTTCTGCC+AGG 0.589713 4_2:-62946800 Msa0614040:three_prime_UTR
AAGATATTATCCATCACTGC+AGG 0.591537 4_2:-62947107 Msa0614040:three_prime_UTR
TCCAGAGCATGGAAGATATG+TGG 0.591673 4_2:-62957991 Msa0614040:CDS
TAGTGGGAGATCGAGTTCAA+TGG 0.592088 4_2:-62954469 Msa0614040:CDS
AGAAATGAGAAAGAAAATTG+GGG 0.592293 4_2:+62959908 None:intergenic
TGAAATTGAAGAAGCCATAG+CGG 0.592845 4_2:+62959879 None:intergenic
TGATGGCTCTGACCCTGCTG+AGG 0.594277 4_2:-62954376 Msa0614040:CDS
TAGAAGCCTTGAAAATAACC+GGG 0.595455 4_2:-62953239 Msa0614040:CDS
AGGGTTTCAGAATCCTCGAT+GGG 0.596282 4_2:-62951351 Msa0614040:CDS
CAAGGATAAAGTACCTGCAA+AGG 0.597432 4_2:-62953764 Msa0614040:intron
AAGGAAGATTGGCAGAGCCA+GGG 0.598137 4_2:-62951370 Msa0614040:CDS
TTGTAGGTGCTGAAAGAGGT+AGG 0.598973 4_2:-62953624 Msa0614040:intron
TGGGAAAGTGAGGTGTGGAG+TGG 0.600919 4_2:+62959849 None:intergenic
AGAGACATAACGGTTGAGAA+GGG 0.601243 4_2:+62959773 None:intergenic
TACTTAGCCTAATGTGTACA+GGG 0.603549 4_2:-62946517 Msa0614040:three_prime_UTR
CTAAACCATTGGATGCTAGT+GGG 0.606784 4_2:-62954485 Msa0614040:CDS
TCCATTCTACGTATTGTAGG+TGG 0.610681 4_2:-62946632 Msa0614040:three_prime_UTR
ATTGCTCGCTATAAAGGTGA+AGG 0.614217 4_2:-62951389 Msa0614040:CDS
ATTCGCATAACTCCAGAGCA+TGG 0.619023 4_2:-62958002 Msa0614040:CDS
GAGTTGAGACAGAGACATAA+CGG 0.619755 4_2:+62959763 None:intergenic
AACTCCAGAGAAAGTGGACA+AGG 0.621563 4_2:-62954283 Msa0614040:CDS
CAGGGTTTCAGAATCCTCGA+TGG 0.621991 4_2:-62951352 Msa0614040:CDS
TATATGATCTCGCTTAGGAG+AGG 0.622264 4_2:-62959631 Msa0614040:CDS
TGACAGTGAAGATGAAGACA+AGG 0.622731 4_2:-62954154 Msa0614040:CDS
AATCTTGTAGGTGCTGAAAG+AGG 0.623120 4_2:-62953628 Msa0614040:intron
AGATATGATTCCGGGTGTGA+AGG 0.626081 4_2:-62954325 Msa0614040:CDS
CGACGGTAACAACCGCCGGT+GGG 0.626255 4_2:-62959704 Msa0614040:CDS
TTCGTGCAAAAGTTGGAAAG+GGG 0.629131 4_2:-62951625 Msa0614040:CDS
CGTGCTGCTGATAAAGAAGA+CGG 0.635990 4_2:-62959607 Msa0614040:CDS
GATGAAAATGGAGAAGATGA+CGG 0.637566 4_2:-62954204 Msa0614040:CDS
GATCTCCCACTAGCATCCAA+TGG 0.639472 4_2:+62954480 None:intergenic
AGCATGGAAGATATGTGGCA+AGG 0.640534 4_2:-62957986 Msa0614040:CDS
TCAATGGCAAGAGGACGGTA+GGG 0.641899 4_2:-62953298 Msa0614040:CDS
TATGGTCAATGGCAAGAGGA+CGG 0.642128 4_2:-62953303 Msa0614040:CDS
AGTACTGAAGATCCAGAAAG+TGG 0.643156 4_2:-62954411 Msa0614040:CDS
AACTCGAAGCAAATCTCTAG+GGG 0.644855 4_2:+62953957 None:intergenic
TAGATATGGTCAATGGCAAG+AGG 0.645192 4_2:-62953307 Msa0614040:CDS
GATGGCTCTGACCCTGCTGA+GGG 0.645476 4_2:-62954375 Msa0614040:CDS
ACGTCATGCTGTATATGTGG+AGG 0.652062 4_2:-62958945 Msa0614040:CDS
AATTCCTGAAGAATTTGGAG+TGG 0.655235 4_2:-62951579 Msa0614040:intron
ATGCGAATAATTAGACCATG+TGG 0.655540 4_2:+62958017 None:intergenic
ATCCAGGCATTCCCTCAGCA+GGG 0.657705 4_2:+62954364 None:intergenic
GGTTTAGAGGACGTTGTTGG+GGG 0.666760 4_2:+62954501 None:intergenic
AGAAGCTGCTAAGCTTAAGG+TGG 0.669411 4_2:-62958915 Msa0614040:CDS
AACAGTACAAACGATGGCGA+CGG 0.670972 4_2:-62959721 Msa0614040:CDS
AAGCGAAAAGGGTCCTACCA+CGG 0.671399 4_2:-62954525 Msa0614040:CDS
CGTCTTCTTTATCAGCAGCA+CGG 0.673191 4_2:+62959608 None:intergenic
TGAGCATCGAATCCCACCGG+CGG 0.680677 4_2:+62959692 None:intergenic
AAAGATGTGAACGATCCACA+TGG 0.683209 4_2:-62958032 Msa0614040:CDS
TAGGTGGTGTAGTGTTCACA+TGG 0.690529 4_2:-62946616 Msa0614040:three_prime_UTR
AACCACAACAGTACAAACGA+TGG 0.710045 4_2:-62959727 Msa0614040:CDS
GATGACGGCGATGAAGACGA+CGG 0.710080 4_2:-62954189 Msa0614040:CDS
AGAGAGCCATAAAAGAAGAG+CGG 0.715120 4_2:-62958729 Msa0614040:CDS
AAATTGAAGAAGCCATAGCG+GGG 0.733035 4_2:+62959881 None:intergenic
AGTTCACCGTCAACCCATCG+AGG 0.737192 4_2:+62951338 None:intergenic
AAGTTGGAAACTGATCAAGA+GGG 0.742549 4_2:-62954096 Msa0614040:CDS
AGAAGCCTTGAAAATAACCG+GGG 0.742842 4_2:-62953238 Msa0614040:CDS
TGTGTGATTGGTGAAACATG+AGG 0.794938 4_2:+62959963 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCTATTTAAAAGAAAATAA+AGG + chr4_2:62948209-62948228 None:intergenic 10.0%
!!! AACTATTAGATTTTTATATT+GGG + chr4_2:62949673-62949692 None:intergenic 10.0%
!!! AAACTATTAGATTTTTATAT+TGG + chr4_2:62949674-62949693 None:intergenic 10.0%
!!! TTATAATTTTGTCATATATT+TGG - chr4_2:62950250-62950269 Msa0614040:intron 10.0%
!!! AAGTATTTTTTTTTTTTAGT+TGG - chr4_2:62950361-62950380 Msa0614040:intron 10.0%
!!! AGTATTTTTTTTTTTTAGTT+GGG - chr4_2:62950362-62950381 Msa0614040:intron 10.0%
!!! AATTGAAACTTTTTTTTTTT+GGG - chr4_2:62951687-62951706 Msa0614040:intron 10.0%
!!! AATCATGTTTTTTTTTTTTA+TGG - chr4_2:62952727-62952746 Msa0614040:intron 10.0%
!! GAAATAAAAAAATAAAAAGT+TGG + chr4_2:62953281-62953300 None:intergenic 10.0%
!!! TATTTTATTTTATATTTTGC+AGG - chr4_2:62954892-62954911 Msa0614040:intron 10.0%
!!! ATTTTATTTTATATTTTGCA+GGG - chr4_2:62954893-62954912 Msa0614040:intron 10.0%
!! AATTTAATAAAAAATTTGGA+GGG + chr4_2:62954958-62954977 None:intergenic 10.0%
!! TGACAATTTAATAAAAAATT+TGG + chr4_2:62954962-62954981 None:intergenic 10.0%
!!! TCAATATTATTTCTAATATT+TGG + chr4_2:62955745-62955764 None:intergenic 10.0%
!!! TGATATAAAATTTACATTTT+AGG - chr4_2:62956035-62956054 Msa0614040:intron 10.0%
!! GAAATTATTATTAATTAAAG+TGG + chr4_2:62956281-62956300 None:intergenic 10.0%
!!! AAATAACTTCTTTTAAAATT+GGG + chr4_2:62956311-62956330 None:intergenic 10.0%
!! AAACTTATATAAATTGTATA+AGG - chr4_2:62958441-62958460 Msa0614040:intron 10.0%
!! AACTTATATAAATTGTATAA+GGG - chr4_2:62958442-62958461 Msa0614040:intron 10.0%
!! GATAGAATAATAAATTATAT+GGG + chr4_2:62958993-62959012 None:intergenic 10.0%
!! TGATAGAATAATAAATTATA+TGG + chr4_2:62958994-62959013 None:intergenic 10.0%
!! TCTTTATAAAATAAACTAAT+AGG + chr4_2:62959213-62959232 None:intergenic 10.0%
!!! ATGTTTTTATTCAAAACTTA+CGG - chr4_2:62947056-62947075 Msa0614040:intron 15.0%
!! TTAAATAACAGAATTAACTT+TGG + chr4_2:62947163-62947182 None:intergenic 15.0%
!! CAAAGAATTAAATTATAAAC+AGG + chr4_2:62947443-62947462 None:intergenic 15.0%
!! CTGTTTATAATTTAATTCTT+TGG - chr4_2:62947441-62947460 Msa0614040:intron 15.0%
!! TTATAATTTAATTCTTTGGT+TGG - chr4_2:62947445-62947464 Msa0614040:intron 15.0%
!!! TGATTTGTAATTTGTAATAT+TGG - chr4_2:62948300-62948319 Msa0614040:intron 15.0%
!! ATTTAAACTTACACATATAT+TGG - chr4_2:62948352-62948371 Msa0614040:intron 15.0%
!! AATTTCTATATCATGATAAT+TGG - chr4_2:62948493-62948512 Msa0614040:intron 15.0%
!! AAAAAAACATAGAAGTTATA+GGG + chr4_2:62949887-62949906 None:intergenic 15.0%
!! AAAAAAAACATAGAAGTTAT+AGG + chr4_2:62949888-62949907 None:intergenic 15.0%
!!! TTTAGCTAAAATTTTAGATA+TGG + chr4_2:62949941-62949960 None:intergenic 15.0%
!!! GAATTGAAACTTTTTTTTTT+TGG - chr4_2:62951686-62951705 Msa0614040:intron 15.0%
!!! TTATTTGTCATTTGATTATT+AGG - chr4_2:62952959-62952978 Msa0614040:intron 15.0%
!! ATAAAAAAATAAAAAGTTGG+AGG + chr4_2:62953278-62953297 None:intergenic 15.0%
!!! GTATGTATATTTTAGATTTA+GGG + chr4_2:62953832-62953851 None:intergenic 15.0%
!!! TGTATGTATATTTTAGATTT+AGG + chr4_2:62953833-62953852 None:intergenic 15.0%
!! CAATTTAATAAAAAATTTGG+AGG + chr4_2:62954959-62954978 None:intergenic 15.0%
!!! AATAACTTCTTTTAAAATTG+GGG + chr4_2:62956310-62956329 None:intergenic 15.0%
!!! CAAATAACTTCTTTTAAAAT+TGG + chr4_2:62956312-62956331 None:intergenic 15.0%
!! ATTTAATTATTAAGAACAGA+AGG - chr4_2:62956581-62956600 Msa0614040:intron 15.0%
!! ATACATTTATAAATTTGGAA+AGG + chr4_2:62956740-62956759 None:intergenic 15.0%
!!! ATTATTAATTTTCTGTTACA+AGG + chr4_2:62956778-62956797 None:intergenic 15.0%
!! ATATGTTACAAAACTAATAA+TGG - chr4_2:62957239-62957258 Msa0614040:intron 15.0%
!! TTCGAAAAAATAATACATTT+GGG + chr4_2:62958859-62958878 None:intergenic 15.0%
!! ATTCGAAAAAATAATACATT+TGG + chr4_2:62958860-62958879 None:intergenic 15.0%
!!! ATGTATTATTTTTTCGAATT+AGG - chr4_2:62958861-62958880 Msa0614040:CDS 15.0%
!! AGATATTACTAAAATAAGAT+CGG + chr4_2:62959443-62959462 None:intergenic 15.0%
!! AAGAAATGAGAAAGAAAATT+GGG + chr4_2:62946536-62946555 None:intergenic 20.0%
!!! TTCTGTTATTTAATTCATGA+AGG - chr4_2:62947170-62947189 Msa0614040:intron 20.0%
!!! TTTAAATGATTTTTCTGGAT+TGG + chr4_2:62948339-62948358 None:intergenic 20.0%
!!! GTAAGTTTAAATGATTTTTC+TGG + chr4_2:62948344-62948363 None:intergenic 20.0%
!! ATGATAATTGGAAACATATT+AGG - chr4_2:62948505-62948524 Msa0614040:intron 20.0%
!! AATAAGATAGATTTCATACA+AGG + chr4_2:62949277-62949296 None:intergenic 20.0%
!! GATTTATTACTATCATATCT+TGG - chr4_2:62949303-62949322 Msa0614040:intron 20.0%
!! CTGAAAATGAATTTATAAGT+GGG - chr4_2:62949385-62949404 Msa0614040:intron 20.0%
!!! TCTCATTATAAAATCTTTTC+AGG + chr4_2:62949607-62949626 None:intergenic 20.0%
!!! ATTTGAGTTTTTTCTTACAA+TGG - chr4_2:62949817-62949836 Msa0614040:intron 20.0%
!! TTTCTTACAATGGATAAAAA+AGG - chr4_2:62949827-62949846 Msa0614040:intron 20.0%
!!! ACTTCTATGTTTTTTTTTCT+CGG - chr4_2:62949891-62949910 Msa0614040:intron 20.0%
!!! AAATTTTGCTATCTGAATAT+AGG - chr4_2:62950020-62950039 Msa0614040:intron 20.0%
!! TGAAATACAAAAAATGTGAA+CGG + chr4_2:62950193-62950212 None:intergenic 20.0%
!!! TTGAGTTGGATTTTAAAATA+TGG - chr4_2:62950318-62950337 Msa0614040:intron 20.0%
!! AAAAAATACTTAACCTAAGA+GGG + chr4_2:62950352-62950371 None:intergenic 20.0%
!! AAAAAAATACTTAACCTAAG+AGG + chr4_2:62950353-62950372 None:intergenic 20.0%
!!! TTGTCTTTAAGTTTTGATTT+TGG - chr4_2:62950417-62950436 Msa0614040:intron 20.0%
!! ATTCTAATAGAAATAAAGTG+AGG + chr4_2:62950532-62950551 None:intergenic 20.0%
!!! AATATTTGGTAGCTATTATT+AGG + chr4_2:62950756-62950775 None:intergenic 20.0%
!! ATTATACATTCATGAAGATA+GGG + chr4_2:62951152-62951171 None:intergenic 20.0%
!! AATTATACATTCATGAAGAT+AGG + chr4_2:62951153-62951172 None:intergenic 20.0%
!! TTTATGAAGATGATAGTTAT+TGG - chr4_2:62951270-62951289 Msa0614040:intron 20.0%
!! TTATGAAGATGATAGTTATT+GGG - chr4_2:62951271-62951290 Msa0614040:intron 20.0%
!!! GAAACTTAATTTGATTAACT+AGG - chr4_2:62951363-62951382 Msa0614040:CDS 20.0%
!!! AAAGTATTCTTTTCATTTTC+AGG - chr4_2:62951881-62951900 Msa0614040:intron 20.0%
!! GATAAATCAATTAAGTTTCA+AGG - chr4_2:62952605-62952624 Msa0614040:intron 20.0%
!!! AAATGAGAATATTTGTTACT+TGG + chr4_2:62953050-62953069 None:intergenic 20.0%
!! TAATGTTTGAAGAAATCTAA+AGG - chr4_2:62953541-62953560 Msa0614040:CDS 20.0%
!! AATTGATAGATGTATAAACA+AGG - chr4_2:62953660-62953679 Msa0614040:intron 20.0%
!! ATTGATAGATGTATAAACAA+GGG - chr4_2:62953661-62953680 Msa0614040:intron 20.0%
!! ATTTAAAAAACAGTTGTAAC+CGG - chr4_2:62953852-62953871 Msa0614040:CDS 20.0%
!! TATAACTTCGAAATTGTATA+CGG + chr4_2:62953916-62953935 None:intergenic 20.0%
!! CATTATGTAATAATAAGTAC+TGG - chr4_2:62954421-62954440 Msa0614040:CDS 20.0%
!! AAACAAAAGAACAATAATGA+TGG + chr4_2:62954538-62954557 None:intergenic 20.0%
!!! TAGTAACAAGCTTAAAATTT+TGG + chr4_2:62954575-62954594 None:intergenic 20.0%
!!! ATTTTTTGGTCTTTTTCAAT+CGG - chr4_2:62955307-62955326 Msa0614040:intron 20.0%
!! TATAAATATAATAGATGAGC+TGG + chr4_2:62955443-62955462 None:intergenic 20.0%
!!! AAAATACTTATGCTTTAAGA+TGG + chr4_2:62955836-62955855 None:intergenic 20.0%
!!! AAAGCATAAGTATTTTTAAG+TGG - chr4_2:62955840-62955859 Msa0614040:intron 20.0%
!!! AAATTTTAGCACTAAAGTTA+TGG - chr4_2:62955879-62955898 Msa0614040:intron 20.0%
!! AATGATACATATTCATTCAT+CGG + chr4_2:62957301-62957320 None:intergenic 20.0%
!! AGTAATTATGGTAACAAATT+TGG - chr4_2:62957979-62957998 Msa0614040:CDS 20.0%
!!! CACAACAAATTTTGAAATTA+AGG + chr4_2:62958033-62958052 None:intergenic 20.0%
!! TTAGATTATCTCTTAGAAAT+TGG - chr4_2:62958256-62958275 Msa0614040:intron 20.0%
!! GAAAACAAATCTTATACATA+AGG + chr4_2:62958289-62958308 None:intergenic 20.0%
!!! CTGTTTCTATAAAAATATCT+TGG + chr4_2:62958601-62958620 None:intergenic 20.0%
!! TCACTATAACCAAATAATTT+GGG + chr4_2:62958668-62958687 None:intergenic 20.0%
!! TCGAAAAAATAATACATTTG+GGG + chr4_2:62958858-62958877 None:intergenic 20.0%
!! TCTGGTATTAGTATAAAATA+AGG - chr4_2:62958938-62958957 Msa0614040:CDS 20.0%
!! AAATAAACTAATAGGAAAAG+TGG + chr4_2:62959205-62959224 None:intergenic 20.0%
!! GCAATCTTTATTAATGTATA+TGG - chr4_2:62959242-62959261 Msa0614040:intron 20.0%
!! AGCTTAACTAATTATTATGA+AGG - chr4_2:62959743-62959762 Msa0614040:CDS 20.0%
!! GCTTAACTAATTATTATGAA+GGG - chr4_2:62959744-62959763 Msa0614040:CDS 20.0%
!! CTTAACTAATTATTATGAAG+GGG - chr4_2:62959745-62959764 Msa0614040:CDS 20.0%
!! TTAACTAATTATTATGAAGG+GGG - chr4_2:62959746-62959765 Msa0614040:CDS 20.0%
!! TATGACATACAAGAAAAATT+TGG + chr4_2:62959878-62959897 None:intergenic 20.0%
! AGAAATGAGAAAGAAAATTG+GGG + chr4_2:62946535-62946554 None:intergenic 25.0%
! GAAGAAATGAGAAAGAAAAT+TGG + chr4_2:62946537-62946556 None:intergenic 25.0%
!! GATAATGAATTTCGATTTTC+CGG - chr4_2:62946993-62947012 Msa0614040:intron 25.0%
! TAATTCACAATATACACTAC+CGG + chr4_2:62947015-62947034 None:intergenic 25.0%
! ACATTCTACACTAATTAACA+TGG + chr4_2:62947040-62947059 None:intergenic 25.0%
! AAGAAAGAATGCGTATTATA+AGG + chr4_2:62947137-62947156 None:intergenic 25.0%
! TTAATTGAATGCAATCACAT+GGG + chr4_2:62947317-62947336 None:intergenic 25.0%
! ATTAATTGAATGCAATCACA+TGG + chr4_2:62947318-62947337 None:intergenic 25.0%
!! CTTTACGTTTTCACAATATT+GGG - chr4_2:62947651-62947670 Msa0614040:intron 25.0%
!! TTCTTATGGGATTTGTTTAA+TGG - chr4_2:62947784-62947803 Msa0614040:intron 25.0%
!! TTGCTTAAATTGCTATTACT+TGG - chr4_2:62947890-62947909 Msa0614040:intron 25.0%
!! TGCTTAAATTGCTATTACTT+GGG - chr4_2:62947891-62947910 Msa0614040:intron 25.0%
! CAATCCATTTATTGAATGTT+TGG - chr4_2:62948044-62948063 Msa0614040:intron 25.0%
! CAAACCAAACATTCAATAAA+TGG + chr4_2:62948051-62948070 None:intergenic 25.0%
!! TTTTAAATAGATAAATGCCG+TGG - chr4_2:62948217-62948236 Msa0614040:intron 25.0%
! TTACAAACAGTGCAAATTAT+TGG + chr4_2:62948270-62948289 None:intergenic 25.0%
! TCATGATATAGAAATTACCT+AGG + chr4_2:62948489-62948508 None:intergenic 25.0%
!!! AATAAGTTTTTTCTTTCAGG+AGG + chr4_2:62948538-62948557 None:intergenic 25.0%
! AACTAAAACACAGAAAACAT+TGG - chr4_2:62948575-62948594 Msa0614040:intron 25.0%
!!! GAAAACATTGGTCATTTTTT+CGG - chr4_2:62948587-62948606 Msa0614040:intron 25.0%
!!! AAAACATTGGTCATTTTTTC+GGG - chr4_2:62948588-62948607 Msa0614040:intron 25.0%
! ATTTCAATGATCAAAAGGAA+GGG + chr4_2:62948887-62948906 None:intergenic 25.0%
! AATTTCAATGATCAAAAGGA+AGG + chr4_2:62948888-62948907 None:intergenic 25.0%
! GCTAAATTTCAATGATCAAA+AGG + chr4_2:62948892-62948911 None:intergenic 25.0%
! TAAACTGCATAGATATACTT+CGG + chr4_2:62948935-62948954 None:intergenic 25.0%
! ACTTTAATAAGCTCATTGAA+TGG - chr4_2:62949020-62949039 Msa0614040:intron 25.0%
! CTTTAATAAGCTCATTGAAT+GGG - chr4_2:62949021-62949040 Msa0614040:intron 25.0%
!! TTTTTGTCTATTTAGCACAA+AGG + chr4_2:62949139-62949158 None:intergenic 25.0%
!! CCACTTATAAATTCATTTTC+AGG + chr4_2:62949387-62949406 None:intergenic 25.0%
! CCTGAAAATGAATTTATAAG+TGG - chr4_2:62949384-62949403 Msa0614040:intron 25.0%
!!! TAGTTTTGTAAGAATGAGTT+AGG - chr4_2:62949512-62949531 Msa0614040:intron 25.0%
! TCTAACTGATCATACAAAAT+CGG + chr4_2:62949650-62949669 None:intergenic 25.0%
! GTAAGAAAAAACTCAAATAG+AGG + chr4_2:62949815-62949834 None:intergenic 25.0%
!!! ATTACATGTTTTGATAGAGA+TGG - chr4_2:62949960-62949979 Msa0614040:intron 25.0%
!! TCAGATAGCAAAATTTTGAA+GGG + chr4_2:62950016-62950035 None:intergenic 25.0%
!! TTCAGATAGCAAAATTTTGA+AGG + chr4_2:62950017-62950036 None:intergenic 25.0%
!! CAGTTAAACAAATTTTCTGA+TGG - chr4_2:62950060-62950079 Msa0614040:intron 25.0%
!!! TTTGGTTTTATAAGACAATC+TGG - chr4_2:62950268-62950287 Msa0614040:intron 25.0%
!!! TTTTTTAGTTGGGAAAATGT+AGG - chr4_2:62950372-62950391 Msa0614040:intron 25.0%
! AACCTTAATATATAGCTACT+AGG + chr4_2:62950457-62950476 None:intergenic 25.0%
!! CTATATATTAAGGTTGCTTT+GGG - chr4_2:62950462-62950481 Msa0614040:intron 25.0%
! ATCTACTCATTTAATTGTTG+AGG + chr4_2:62950723-62950742 None:intergenic 25.0%
!!! AGTTGGTAAATTTTACTACT+GGG + chr4_2:62950784-62950803 None:intergenic 25.0%
!!! AAGTTGGTAAATTTTACTAC+TGG + chr4_2:62950785-62950804 None:intergenic 25.0%
! AATACTACAAAAGAGTAATC+TGG - chr4_2:62950901-62950920 Msa0614040:intron 25.0%
! ATTAGCATCTAACAAATGTA+AGG + chr4_2:62950972-62950991 None:intergenic 25.0%
! TAATATCTACTAGAAGATCA+CGG + chr4_2:62951011-62951030 None:intergenic 25.0%
!! AGAAATATTTGGTAGCTATT+AGG + chr4_2:62950759-62950778 None:intergenic 25.0%
!! AAATCAGCTTTAGCTATTTA+AGG - chr4_2:62951505-62951524 Msa0614040:intron 25.0%
!!! TTTTTAAGGTGTAAACAAAC+AGG - chr4_2:62951569-62951588 Msa0614040:intron 25.0%
!! TGACAAAACAAACCAATTTT+GGG + chr4_2:62951595-62951614 None:intergenic 25.0%
!! TTGACAAAACAAACCAATTT+TGG + chr4_2:62951596-62951615 None:intergenic 25.0%
!!! AATTGGTTTGTTTTGTCAAA+CGG - chr4_2:62951597-62951616 Msa0614040:CDS 25.0%
! ACAAGAAAATCACCATTTAA+GGG + chr4_2:62952939-62952958 None:intergenic 25.0%
! AACAAGAAAATCACCATTTA+AGG + chr4_2:62952940-62952959 None:intergenic 25.0%
!! TTTGTCATTTGATTATTAGG+AGG - chr4_2:62952962-62952981 Msa0614040:intron 25.0%
!! AAATATTCTCATTTTCAACC+AGG - chr4_2:62953056-62953075 Msa0614040:intron 25.0%
! ATAAGTTTCATGATATTACC+TGG + chr4_2:62953247-62953266 None:intergenic 25.0%
!! CTATCATGGTTTAAAATTCA+CGG + chr4_2:62953430-62953449 None:intergenic 25.0%
!! ATTTTAAACCATGATAGCAA+TGG - chr4_2:62953433-62953452 Msa0614040:intron 25.0%
! GTAGTCATTATCAAGATAAA+TGG - chr4_2:62953469-62953488 Msa0614040:intron 25.0%
!!! ATTTAGCTTGTGTAACAATT+TGG + chr4_2:62953594-62953613 None:intergenic 25.0%
! TAATATAGACTTCGTGAAAA+AGG - chr4_2:62953698-62953717 Msa0614040:intron 25.0%
! AATATAGACTTCGTGAAAAA+GGG - chr4_2:62953699-62953718 Msa0614040:intron 25.0%
! AGATATCCAATTTCAAAATG+TGG - chr4_2:62953768-62953787 Msa0614040:CDS 25.0%
! AATTTCAAAATGTGGAACTA+GGG - chr4_2:62953776-62953795 Msa0614040:CDS 25.0%
!! TTTTCTTCAAATGTATCTCA+TGG - chr4_2:62954066-62954085 Msa0614040:CDS 25.0%
!!! TGTTGTTTTTAGAAGTAGTT+TGG - chr4_2:62954210-62954229 Msa0614040:CDS 25.0%
!!! TAATAATAAGTACTGGCATA+TGG - chr4_2:62954428-62954447 Msa0614040:CDS 25.0%
!!! TTTTAAGCTTGTTACTAGAT+TGG - chr4_2:62954578-62954597 Msa0614040:intron 25.0%
!!! TTTAAGCTTGTTACTAGATT+GGG - chr4_2:62954579-62954598 Msa0614040:intron 25.0%
!!! GAAGTGAATAGTTATTTCTT+TGG - chr4_2:62954626-62954645 Msa0614040:intron 25.0%
! ATCTTATGTTCCATTGAAAT+TGG + chr4_2:62954679-62954698 None:intergenic 25.0%
! GTGTAAGTTCTCTTAAAAAA+AGG - chr4_2:62955400-62955419 Msa0614040:intron 25.0%
!! CTTTTTGCATCTCTAATTTT+GGG - chr4_2:62955514-62955533 Msa0614040:intron 25.0%
!! ACACGTAAGATTACATTTTA+AGG - chr4_2:62955962-62955981 Msa0614040:intron 25.0%
! CGTTTGCTTAATTATTTATG+AGG + chr4_2:62956009-62956028 None:intergenic 25.0%
!!! TTCTTCTCTTTTTTTCCATA+TGG - chr4_2:62956333-62956352 Msa0614040:intron 25.0%
!!! ATATAACCCATATTTTTACG+AGG + chr4_2:62956671-62956690 None:intergenic 25.0%
!!! AATTTTAAGTTGTTCCAAGA+TGG - chr4_2:62956815-62956834 Msa0614040:intron 25.0%
!! TTGATAACTAGTTTGAGTTT+GGG - chr4_2:62956868-62956887 Msa0614040:intron 25.0%
!! CCTCTTTATTATTTCTTTCT+GGG + chr4_2:62957068-62957087 None:intergenic 25.0%
!! TCCTCTTTATTATTTCTTTC+TGG + chr4_2:62957069-62957088 None:intergenic 25.0%
! AAATAATAAAGAGGAGAATC+TGG - chr4_2:62957074-62957093 Msa0614040:intron 25.0%
! AGAAATCGATACAAACATAT+AGG - chr4_2:62957119-62957138 Msa0614040:intron 25.0%
! TAGAAAAAGAAGTTCTATGA+AGG - chr4_2:62957809-62957828 Msa0614040:intron 25.0%
!! TTTACCTTCATTGTAGTTTT+AGG + chr4_2:62957853-62957872 None:intergenic 25.0%
! AAACTACAATGAAGGTAAAT+TGG - chr4_2:62957854-62957873 Msa0614040:intron 25.0%
! AACTACAATGAAGGTAAATT+GGG - chr4_2:62957855-62957874 Msa0614040:intron 25.0%
! ATTTCATGATTCTATATCCT+TGG + chr4_2:62957929-62957948 None:intergenic 25.0%
! CAAATTTGGTACAATAGTAA+AGG - chr4_2:62957993-62958012 Msa0614040:CDS 25.0%
! ACAAATCTTATACATAAGGA+CGG + chr4_2:62958285-62958304 None:intergenic 25.0%
! GAAACAAATCATGATACATA+AGG + chr4_2:62958318-62958337 None:intergenic 25.0%
!!! TATCATGATTTGTTTCCTTA+TGG - chr4_2:62958322-62958341 Msa0614040:intron 25.0%
!!! TATTAGTATAAGGGAGTATT+TGG - chr4_2:62958353-62958372 Msa0614040:intron 25.0%
! AATTTGTGTAGAGCTAAATT+TGG - chr4_2:62958477-62958496 Msa0614040:intron 25.0%
! CACTATAACCAAATAATTTG+GGG + chr4_2:62958667-62958686 None:intergenic 25.0%
! CTCACTATAACCAAATAATT+TGG + chr4_2:62958669-62958688 None:intergenic 25.0%
! ATCATGATACATACAGAATA+TGG + chr4_2:62958889-62958908 None:intergenic 25.0%
! CTCATAATCTTAATTGAACA+AGG + chr4_2:62958918-62958937 None:intergenic 25.0%
! TTCAATTAAGATTATGAGTC+TGG - chr4_2:62958920-62958939 Msa0614040:CDS 25.0%
!!! TTTTGGTCTTTCATTATACT+GGG + chr4_2:62959028-62959047 None:intergenic 25.0%
!!! ATTTTGGTCTTTCATTATAC+TGG + chr4_2:62959029-62959048 None:intergenic 25.0%
! TCTTTGCTTTCTTTACTAAA+AGG + chr4_2:62959071-62959090 None:intergenic 25.0%
!!! TCTTTCTGTTTTTGTTTAAG+TGG - chr4_2:62959161-62959180 Msa0614040:intron 25.0%
! AGTTTACTAATTATACGTGT+CGG - chr4_2:62959390-62959409 Msa0614040:intron 25.0%
!! ATCTATAAAACTTGTTTCCA+TGG + chr4_2:62959416-62959435 None:intergenic 25.0%
! ACAATTCATAAATGCTATCA+GGG + chr4_2:62959522-62959541 None:intergenic 25.0%
! TACAATTCATAAATGCTATC+AGG + chr4_2:62959523-62959542 None:intergenic 25.0%
! GATTTCGTAGTTATGATAAA+TGG + chr4_2:62959902-62959921 None:intergenic 25.0%
! GTTTCATTATTCTTTCTGTT+AGG - chr4_2:62959945-62959964 Msa0614040:five_prime_UTR 25.0%
!! ACACAGTTGATTTTGAGAAT+GGG + chr4_2:62947231-62947250 None:intergenic 30.0%
!! TACACAGTTGATTTTGAGAA+TGG + chr4_2:62947232-62947251 None:intergenic 30.0%
!!! TTTTTTCCCCACATTTTTAC+CGG - chr4_2:62947341-62947360 Msa0614040:intron 30.0%
!! ATTGGTTTGTGTACTTTAGT+AGG - chr4_2:62947406-62947425 Msa0614040:intron 30.0%
TGATAACTCTTCTCAAAGTA+GGG - chr4_2:62947587-62947606 Msa0614040:intron 30.0%
! GCTTTACGTTTTCACAATAT+TGG - chr4_2:62947650-62947669 Msa0614040:intron 30.0%
!!! GCTTTTTTAAGAGATAAAGC+TGG - chr4_2:62947746-62947765 Msa0614040:intron 30.0%
TAATGAATGTCTTTGCATTG+TGG - chr4_2:62947813-62947832 Msa0614040:intron 30.0%
AATGTCAACTGTAATGTCAT+AGG - chr4_2:62947845-62947864 Msa0614040:intron 30.0%
ATGTCAACTGTAATGTCATA+GGG - chr4_2:62947846-62947865 Msa0614040:intron 30.0%
AGCAACAGTATGTATTACTA+GGG + chr4_2:62947875-62947894 None:intergenic 30.0%
AAGCAACAGTATGTATTACT+AGG + chr4_2:62947876-62947895 None:intergenic 30.0%
AAATTAGTTGTGGAATCTAC+TGG - chr4_2:62947986-62948005 Msa0614040:intron 30.0%
!!! GGGAATAAGTTTTTTCTTTC+AGG + chr4_2:62948541-62948560 None:intergenic 30.0%
!!! GTTTTCTGTGTTTTAGTTTC+AGG + chr4_2:62948573-62948592 None:intergenic 30.0%
!!! GTCATTTTTTCGGGATAAAA+GGG - chr4_2:62948597-62948616 Msa0614040:intron 30.0%
!!! TCATTTTTTCGGGATAAAAG+GGG - chr4_2:62948598-62948617 Msa0614040:intron 30.0%
AAACTGCATAGATATACTTC+GGG + chr4_2:62948934-62948953 None:intergenic 30.0%
GTAACAAGCTCATTGAAATA+TGG - chr4_2:62948965-62948984 Msa0614040:intron 30.0%
GTATAATTACGGTTGAAGTT+AGG + chr4_2:62949162-62949181 None:intergenic 30.0%
!! CAAGTTTTATACAGAGAATC+AGG + chr4_2:62949228-62949247 None:intergenic 30.0%
! TTTAGAGTTCCACATTAGAT+AGG - chr4_2:62949355-62949374 Msa0614040:intron 30.0%
!! TGACATCTAGAATTTTTGAC+CGG + chr4_2:62949457-62949476 None:intergenic 30.0%
CTCAAGTTTGAAAAGAGATA+AGG - chr4_2:62949581-62949600 Msa0614040:intron 30.0%
TAATAAACAGAAACCACACA+CGG + chr4_2:62949740-62949759 None:intergenic 30.0%
CTAGTGAAAATATGGTAGAA+GGG + chr4_2:62949764-62949783 None:intergenic 30.0%
!! CAGATAGCAAAATTTTGAAG+GGG + chr4_2:62950015-62950034 None:intergenic 30.0%
! AATTTGTTTAACTGTCAGCA+TGG + chr4_2:62950054-62950073 None:intergenic 30.0%
CTCTTATCTAGATTAGCATA+AGG - chr4_2:62950226-62950245 Msa0614040:intron 30.0%
TCAACACCTACAATACAAAT+TGG + chr4_2:62950302-62950321 None:intergenic 30.0%
GACCTAGTAGCTATATATTA+AGG - chr4_2:62950452-62950471 Msa0614040:intron 30.0%
GCTATATATTAAGGTTGCTT+TGG - chr4_2:62950461-62950480 Msa0614040:intron 30.0%
! TCAGAAGTTTCTGAGAAATA+TGG + chr4_2:62950496-62950515 None:intergenic 30.0%
AAATGCTAACCAATACATGA+AGG + chr4_2:62950611-62950630 None:intergenic 30.0%
TAGCATTTACTCACTTGTAT+TGG - chr4_2:62950623-62950642 Msa0614040:intron 30.0%
! GACAGTTTAAAAGTACATTG+TGG + chr4_2:62950878-62950897 None:intergenic 30.0%
! TCCATTTTGTAATCAGTTGT+AGG - chr4_2:62950941-62950960 Msa0614040:intron 30.0%
AAGATAGGGAGAGAAATATT+TGG + chr4_2:62951138-62951157 None:intergenic 30.0%
AAGATGATAGTTATTGGGAA+AGG - chr4_2:62951276-62951295 Msa0614040:intron 30.0%
ATAGTTATTGGGAAAGGTAA+AGG - chr4_2:62951282-62951301 Msa0614040:intron 30.0%
! CCAAGTTGAATTCTCTAAAA+GGG - chr4_2:62951411-62951430 Msa0614040:intron 30.0%
AATTCAAACTTTCTCTACTC+TGG + chr4_2:62951671-62951690 None:intergenic 30.0%
AACTTGAAACCACAAAAAAC+TGG + chr4_2:62951719-62951738 None:intergenic 30.0%
TGTCTTGAAAGATATGATTC+CGG - chr4_2:62952106-62952125 Msa0614040:intron 30.0%
GGAAAATGATACAGAAATTC+TGG - chr4_2:62952307-62952326 Msa0614040:intron 30.0%
ATTGAGATAAATGGTGATCT+TGG - chr4_2:62952377-62952396 Msa0614040:intron 30.0%
TCTGATCTTGCAAAATTCAT+TGG - chr4_2:62952653-62952672 Msa0614040:intron 30.0%
!! TGACTAGATTTTAAGAAGGA+TGG + chr4_2:62952762-62952781 None:intergenic 30.0%
!! CTTGTGACTAGATTTTAAGA+AGG + chr4_2:62952766-62952785 None:intergenic 30.0%
AGAATCATCAACCATTATCT+GGG - chr4_2:62952871-62952890 Msa0614040:intron 30.0%
TTTAAGGGATCAAATGAAGT+TGG + chr4_2:62952924-62952943 None:intergenic 30.0%
ACTTCATTTGATCCCTTAAA+TGG - chr4_2:62952924-62952943 Msa0614040:intron 30.0%
TTTCAACCAGGCTTATATAT+TGG - chr4_2:62953068-62953087 Msa0614040:intron 30.0%
ATTCAAATGAGACGTAGATA+TGG - chr4_2:62953119-62953138 Msa0614040:intron 30.0%
TATCCTTCATTCTGTGATAT+TGG - chr4_2:62953301-62953320 Msa0614040:CDS 30.0%
AAACCAATATCACAGAATGA+AGG + chr4_2:62953307-62953326 None:intergenic 30.0%
! TGCAGTGTTTTATCAGAAAT+TGG - chr4_2:62953374-62953393 Msa0614040:intron 30.0%
TAGAAAAACCATTGCTATCA+TGG + chr4_2:62953444-62953463 None:intergenic 30.0%
TTCACGAAGTCTATATTAGA+GGG + chr4_2:62953696-62953715 None:intergenic 30.0%
TTTCACGAAGTCTATATTAG+AGG + chr4_2:62953697-62953716 None:intergenic 30.0%
!!! CTAGTTCCACATTTTGAAAT+TGG + chr4_2:62953777-62953796 None:intergenic 30.0%
CAATTTCAAAATGTGGAACT+AGG - chr4_2:62953775-62953794 Msa0614040:CDS 30.0%
ATTGTATACGGTTGTATCTA+AGG + chr4_2:62953904-62953923 None:intergenic 30.0%
ATTATCCTATGCAAAGATCT+AGG - chr4_2:62954036-62954055 Msa0614040:CDS 30.0%
TTATCCTATGCAAAGATCTA+GGG - chr4_2:62954037-62954056 Msa0614040:CDS 30.0%
GAGATACATTTGAAGAAAAG+TGG + chr4_2:62954065-62954084 None:intergenic 30.0%
CAGAACATATAAGAGGAAAA+TGG - chr4_2:62954140-62954159 Msa0614040:CDS 30.0%
TTATGACTAACTAGAAGTTC+AGG + chr4_2:62954170-62954189 None:intergenic 30.0%
!! TTTTGATTGCTATCTTAAGC+TGG - chr4_2:62954278-62954297 Msa0614040:CDS 30.0%
AACACCCAAAATTTATGCAT+GGG + chr4_2:62954356-62954375 None:intergenic 30.0%
CACATCTTATATTCATGTCA+TGG + chr4_2:62954379-62954398 None:intergenic 30.0%
!! TTAAGCTTGTTACTAGATTG+GGG - chr4_2:62954580-62954599 Msa0614040:intron 30.0%
! ATTTTTGTGTGTGAAATGTG+TGG - chr4_2:62954708-62954727 Msa0614040:intron 30.0%
ATAGTGCACAATGCAAAAAT+CGG + chr4_2:62954747-62954766 None:intergenic 30.0%
GATAGCAAGGAAACAAAAAT+AGG + chr4_2:62954922-62954941 None:intergenic 30.0%
TTGTAATTCCACCTTTACTT+CGG - chr4_2:62955186-62955205 Msa0614040:intron 30.0%
AAAAAATTGCACCGAAGTAA+AGG + chr4_2:62955200-62955219 None:intergenic 30.0%
TGCTGCAAAAAATTGACAAA+AGG + chr4_2:62955237-62955256 None:intergenic 30.0%
TGTTGTTGGATTTGTGTATT+GGG - chr4_2:62955272-62955291 Msa0614040:intron 30.0%
AAGACCAAAAAATGATACTC+AGG + chr4_2:62955300-62955319 None:intergenic 30.0%
TTTACAAGTCTCTGATAGTA+TGG + chr4_2:62955362-62955381 None:intergenic 30.0%
! TAAGTTGGATTATAAAACGC+TGG + chr4_2:62955476-62955495 None:intergenic 30.0%
CCAAAATTAGAGATGCAAAA+AGG + chr4_2:62955516-62955535 None:intergenic 30.0%
! CCTTTTTGCATCTCTAATTT+TGG - chr4_2:62955513-62955532 Msa0614040:intron 30.0%
TTTCAATAGACCATACCTTT+AGG + chr4_2:62955581-62955600 None:intergenic 30.0%
! AAAGGTATGGTCTATTGAAA+TGG - chr4_2:62955581-62955600 Msa0614040:intron 30.0%
!! CAATTATCTGGCTTTACATT+TGG + chr4_2:62955607-62955626 None:intergenic 30.0%
ATGTAAAGCCAGATAATTGA+TGG - chr4_2:62955608-62955627 Msa0614040:intron 30.0%
TGTAAAGCCAGATAATTGAT+GGG - chr4_2:62955609-62955628 Msa0614040:intron 30.0%
! TCTACAATTCTATGTTGGTT+TGG + chr4_2:62956061-62956080 None:intergenic 30.0%
ACGATTCTACAATTCTATGT+TGG + chr4_2:62956066-62956085 None:intergenic 30.0%
!!! CTTCTTTTAAAATTGGGGAA+GGG + chr4_2:62956305-62956324 None:intergenic 30.0%
!!! ACTTCTTTTAAAATTGGGGA+AGG + chr4_2:62956306-62956325 None:intergenic 30.0%
AAGACAGAAAAGAATCCATA+TGG + chr4_2:62956351-62956370 None:intergenic 30.0%
! TATGGATTCTTTTCTGTCTT+TGG - chr4_2:62956351-62956370 Msa0614040:intron 30.0%
GACATGAAACATCTAATTAC+AGG + chr4_2:62956435-62956454 None:intergenic 30.0%
! ACAGGAAACAAACTTTGAAA+AGG - chr4_2:62956526-62956545 Msa0614040:intron 30.0%
AGAAACTTGTAACAAAGTAC+GGG + chr4_2:62956625-62956644 None:intergenic 30.0%
CAGAAACTTGTAACAAAGTA+CGG + chr4_2:62956626-62956645 None:intergenic 30.0%
!! GTTGATAACTAGTTTGAGTT+TGG - chr4_2:62956867-62956886 Msa0614040:intron 30.0%
! TGATAACTAGTTTGAGTTTG+GGG - chr4_2:62956869-62956888 Msa0614040:intron 30.0%
TTCCTACATCATGTTTATCA+AGG + chr4_2:62956915-62956934 None:intergenic 30.0%
! TACTTCATATGGTTTGCATA+TGG - chr4_2:62956961-62956980 Msa0614040:intron 30.0%
TTCAATTAGGAAAATGCAGA+AGG + chr4_2:62956993-62957012 None:intergenic 30.0%
ACTACTACTACAGTTCAATT+AGG + chr4_2:62957006-62957025 None:intergenic 30.0%
TGTGTTGTGGAATTATCTTA+GGG + chr4_2:62957045-62957064 None:intergenic 30.0%
CCCAGAAAGAAATAATAAAG+AGG - chr4_2:62957065-62957084 Msa0614040:intron 30.0%
TAGAAAAAGAAGCTCTATGA+AGG - chr4_2:62957562-62957581 Msa0614040:intron 30.0%
GTAACCTAAAACTACAATGA+AGG - chr4_2:62957599-62957618 Msa0614040:intron 30.0%
! TTCACCTTCATTGTAGTTTT+AGG + chr4_2:62957606-62957625 None:intergenic 30.0%
AAACTACAATGAAGGTGAAT+TGG - chr4_2:62957607-62957626 Msa0614040:intron 30.0%
AACTACAATGAAGGTGAATT+GGG - chr4_2:62957608-62957627 Msa0614040:intron 30.0%
CTTGACCTATCATGTTAATT+TGG - chr4_2:62957674-62957693 Msa0614040:intron 30.0%
GCAATCCAAATTAACATGAT+AGG + chr4_2:62957682-62957701 None:intergenic 30.0%
GTAACCTAAAACTACAATGA+AGG - chr4_2:62957599-62957618 Msa0614040:intron 30.0%
CCATAATTACTGTAGTTAGA+AGG + chr4_2:62957970-62957989 None:intergenic 30.0%
CCTTCTAACTACAGTAATTA+TGG - chr4_2:62957967-62957986 Msa0614040:intron 30.0%
! GTGCACACATTTTTCTTTAT+CGG - chr4_2:62958050-62958069 Msa0614040:CDS 30.0%
TTTCTTTATCGGATGATTGT+TGG - chr4_2:62958061-62958080 Msa0614040:intron 30.0%
GTTATTAAGATAGACTCGAT+AGG - chr4_2:62958140-62958159 Msa0614040:intron 30.0%
! TGACATAATGAGATGTTTTC+AGG + chr4_2:62958212-62958231 None:intergenic 30.0%
GAAGTCCAGTATTAGTATAA+GGG - chr4_2:62958344-62958363 Msa0614040:intron 30.0%
ATACTCCCTTATACTAATAC+TGG + chr4_2:62958352-62958371 None:intergenic 30.0%
!! AAATTGTATAAGGGAGTGTT+TGG - chr4_2:62958451-62958470 Msa0614040:intron 30.0%
CCTATCACTAAACAAACAAT+GGG + chr4_2:62958574-62958593 None:intergenic 30.0%
TCCATTTACCCCAAATTATT+TGG - chr4_2:62958656-62958675 Msa0614040:intron 30.0%
! ACCAAATAATTTGGGGTAAA+TGG + chr4_2:62958660-62958679 None:intergenic 30.0%
CATAACTTCTCATGTTAAGT+AGG + chr4_2:62958747-62958766 None:intergenic 30.0%
TTTCATTATACTGGGAAAAG+GGG + chr4_2:62959020-62959039 None:intergenic 30.0%
CTTTCATTATACTGGGAAAA+GGG + chr4_2:62959021-62959040 None:intergenic 30.0%
TCTTTCATTATACTGGGAAA+AGG + chr4_2:62959022-62959041 None:intergenic 30.0%
! GACCAAAATCGTATTACTTT+TGG - chr4_2:62959040-62959059 Msa0614040:intron 30.0%
CAATTCATAAATGCTATCAG+GGG + chr4_2:62959521-62959540 None:intergenic 30.0%
! TCCTTTATTTAACCATGTAG+TGG - chr4_2:62959543-62959562 Msa0614040:CDS 30.0%
CAATCAAACTTAAGTGTACA+TGG + chr4_2:62959719-62959738 None:intergenic 30.0%
CACACTATACAAATTGATGA+AGG + chr4_2:62959853-62959872 None:intergenic 30.0%
TGAAATTGAAGAAGCCATAG+CGG + chr4_2:62946564-62946583 None:intergenic 35.0%
!!! TTGTGGAGAGGTTTTGTTTT+GGG + chr4_2:62946613-62946632 None:intergenic 35.0%
GTTCTTATATGATCTCGCTT+AGG - chr4_2:62946804-62946823 Msa0614040:intron 35.0%
TGATGTTCACGATGATGATT+GGG - chr4_2:62946856-62946875 Msa0614040:intron 35.0%
TGTGTGTGTTAGTGTTTCAT+TGG - chr4_2:62947388-62947407 Msa0614040:intron 35.0%
GTGATAACTCTTCTCAAAGT+AGG - chr4_2:62947586-62947605 Msa0614040:intron 35.0%
!! AGTAGGGATTTTGATGAATG+AGG - chr4_2:62947603-62947622 Msa0614040:intron 35.0%
!! GTAGGGATTTTGATGAATGA+GGG - chr4_2:62947604-62947623 Msa0614040:intron 35.0%
! ATTGTACCGCTCTTCTTTTA+TGG + chr4_2:62947720-62947739 None:intergenic 35.0%
CTGGACTTGTAAGTTCTTAT+GGG - chr4_2:62947771-62947790 Msa0614040:intron 35.0%
TTGAGCTTGCAAATTAGTTG+TGG - chr4_2:62947976-62947995 Msa0614040:intron 35.0%
AACACTAAAATGTCACACCA+CGG + chr4_2:62948237-62948256 None:intergenic 35.0%
! AACAGTGCAAATTATTGGCT+TGG + chr4_2:62948265-62948284 None:intergenic 35.0%
ATGCGAATAATTAGACCATG+TGG + chr4_2:62948426-62948445 None:intergenic 35.0%
!! TTTAGTTTCAGGTTGAGGTT+GGG + chr4_2:62948562-62948581 None:intergenic 35.0%
!!! TTTTAGTTTCAGGTTGAGGT+TGG + chr4_2:62948563-62948582 None:intergenic 35.0%
!!! TGTGTTTTAGTTTCAGGTTG+AGG + chr4_2:62948567-62948586 None:intergenic 35.0%
!!! GGTCATTTTTTCGGGATAAA+AGG - chr4_2:62948596-62948615 Msa0614040:intron 35.0%
AGAAAAGATGGACGCATAAA+TGG + chr4_2:62948642-62948661 None:intergenic 35.0%
AGCTACTCTAACAGAAAAGA+TGG + chr4_2:62948654-62948673 None:intergenic 35.0%
CTCTAATGTTGAGGTTTAGT+TGG - chr4_2:62948715-62948734 Msa0614040:intron 35.0%
AGTTGGAACCTTTAGCATTA+CGG - chr4_2:62948732-62948751 Msa0614040:intron 35.0%
AAAACCGCAGGGTATAATTA+CGG + chr4_2:62949173-62949192 None:intergenic 35.0%
AGGCTATATCCTATCTAATG+TGG + chr4_2:62949367-62949386 None:intergenic 35.0%
!! GACATCTAGAATTTTTGACC+GGG + chr4_2:62949456-62949475 None:intergenic 35.0%
AAAACTAGCTGGTAAAGTGA+GGG + chr4_2:62949499-62949518 None:intergenic 35.0%
CTCATTCTTACAAAACTAGC+TGG + chr4_2:62949510-62949529 None:intergenic 35.0%
! ATTTCTGCACGTGATACTTT+TGG - chr4_2:62949700-62949719 Msa0614040:intron 35.0%
CCTAGTGAAAATATGGTAGA+AGG + chr4_2:62949765-62949784 None:intergenic 35.0%
! CCTTCTACCATATTTTCACT+AGG - chr4_2:62949762-62949781 Msa0614040:intron 35.0%
CAAGTTGCCTAGTGAAAATA+TGG + chr4_2:62949772-62949791 None:intergenic 35.0%
AATCACAGTCATAATGCTTG+CGG - chr4_2:62950109-62950128 Msa0614040:intron 35.0%
CACCAACCAATTTGTATTGT+AGG - chr4_2:62950293-62950312 Msa0614040:intron 35.0%
CACCTACAATACAAATTGGT+TGG + chr4_2:62950298-62950317 None:intergenic 35.0%
!! TTGTATTGTAGGTGTTGAGT+TGG - chr4_2:62950304-62950323 Msa0614040:intron 35.0%
ATGTAGGTTCAATCATATGC+AGG - chr4_2:62950388-62950407 Msa0614040:intron 35.0%
ACTACTGGGAGAGAAATATT+TGG + chr4_2:62950770-62950789 None:intergenic 35.0%
! ATTAGAGACAAGTCTGAAGT+TGG + chr4_2:62950801-62950820 None:intergenic 35.0%
GCCTACAACTGATTACAAAA+TGG + chr4_2:62950945-62950964 None:intergenic 35.0%
AGTTGAGAGAACGATTTATG+AGG - chr4_2:62951323-62951342 Msa0614040:CDS 35.0%
! GCCAAGTTGAATTCTCTAAA+AGG - chr4_2:62951410-62951429 Msa0614040:intron 35.0%
!! CCCTTTTAGAGAATTCAACT+TGG + chr4_2:62951414-62951433 None:intergenic 35.0%
! GTTGTAACAGCTTCTGAAAA+AGG - chr4_2:62951527-62951546 Msa0614040:intron 35.0%
!!! CACGGGATCACTATTTTTTA+AGG - chr4_2:62951555-62951574 Msa0614040:intron 35.0%
TAAACAAACAGGCCCAAAAT+TGG - chr4_2:62951580-62951599 Msa0614040:CDS 35.0%
!!! GGGTTTAAACCAGTTTTTTG+TGG - chr4_2:62951707-62951726 Msa0614040:intron 35.0%
! ATAGGTTGAAACTTGAGACT+GGG + chr4_2:62951834-62951853 None:intergenic 35.0%
! AATAGGTTGAAACTTGAGAC+TGG + chr4_2:62951835-62951854 None:intergenic 35.0%
TTGCTGTGGGATAACATAAT+AGG + chr4_2:62951852-62951871 None:intergenic 35.0%
CTTTATTGCAGTATTGCTGT+GGG + chr4_2:62951865-62951884 None:intergenic 35.0%
ACTTTATTGCAGTATTGCTG+TGG + chr4_2:62951866-62951885 None:intergenic 35.0%
!! TTCAAGACATTCTGAAATCC+AGG + chr4_2:62952095-62952114 None:intergenic 35.0%
GTCTTGAAAGATATGATTCC+GGG - chr4_2:62952107-62952126 Msa0614040:intron 35.0%
! TCTAATGTCTAAGGTGATTG+AGG - chr4_2:62952181-62952200 Msa0614040:intron 35.0%
GGTGATTGAGGAATTATTTG+AGG - chr4_2:62952193-62952212 Msa0614040:intron 35.0%
AGTGAGGATGAAGATGAAAA+TGG - chr4_2:62952224-62952243 Msa0614040:intron 35.0%
GATGAAAATGGAGAAGATGA+CGG - chr4_2:62952236-62952255 Msa0614040:intron 35.0%
TGATACAGAAATTCTGGATC+TGG - chr4_2:62952313-62952332 Msa0614040:intron 35.0%
! TAAGTTGGAAACTGATCAAG+AGG - chr4_2:62952343-62952362 Msa0614040:intron 35.0%
AAGTTGGAAACTGATCAAGA+GGG - chr4_2:62952344-62952363 Msa0614040:intron 35.0%
!! GATGATGGGATTGAGATAAA+TGG - chr4_2:62952368-62952387 Msa0614040:intron 35.0%
ATTGCTGTCAAAGTTGTCAT+TGG - chr4_2:62952428-62952447 Msa0614040:intron 35.0%
! GACTTCGTTTTCAACAGTAA+AGG + chr4_2:62952546-62952565 None:intergenic 35.0%
TCTTGCAAAATTCATTGGCA+AGG - chr4_2:62952658-62952677 Msa0614040:intron 35.0%
ATGCATTGCTTCAATCTTGT+AGG - chr4_2:62952800-62952819 Msa0614040:intron 35.0%
CAGAATCATCAACCATTATC+TGG - chr4_2:62952870-62952889 Msa0614040:intron 35.0%
AAAATCGTTGACCCAGATAA+TGG + chr4_2:62952885-62952904 None:intergenic 35.0%
TATGCACCAATATATAAGCC+TGG + chr4_2:62953077-62953096 None:intergenic 35.0%
GGCTTATATATTGGTGCATA+TGG - chr4_2:62953077-62953096 Msa0614040:intron 35.0%
GTAGAAGCCTTGAAAATAAC+CGG - chr4_2:62953200-62953219 Msa0614040:intron 35.0%
TAGAAGCCTTGAAAATAACC+GGG - chr4_2:62953201-62953220 Msa0614040:intron 35.0%
TATCAGAAATTGGACGATGT+TGG - chr4_2:62953384-62953403 Msa0614040:intron 35.0%
TTCGTGAAAAAGGGATCAAA+AGG - chr4_2:62953708-62953727 Msa0614040:intron 35.0%
AAATGTGGAACTAGGGTTTA+CGG - chr4_2:62953783-62953802 Msa0614040:CDS 35.0%
TATCTAAGGAGACCCTAAAA+TGG + chr4_2:62953890-62953909 None:intergenic 35.0%
! CTCATGGACTTTTGTATTTG+AGG - chr4_2:62954082-62954101 Msa0614040:CDS 35.0%
TCATGGACAGAACATATAAG+AGG - chr4_2:62954133-62954152 Msa0614040:CDS 35.0%
! ATTGTTCTAGGTGTTGTGTT+AGG - chr4_2:62954303-62954322 Msa0614040:CDS 35.0%
GTTAGGAGTAACACATACAT+TGG - chr4_2:62954320-62954339 Msa0614040:CDS 35.0%
! TGCATCCCATGCATAAATTT+TGG - chr4_2:62954348-62954367 Msa0614040:CDS 35.0%
! GCATCCCATGCATAAATTTT+GGG - chr4_2:62954349-62954368 Msa0614040:CDS 35.0%
GAACACCCAAAATTTATGCA+TGG + chr4_2:62954357-62954376 None:intergenic 35.0%
! ACAAGACAAACCAAGTTGAA+AGG + chr4_2:62954485-62954504 None:intergenic 35.0%
!!! GTGGTTTTGACCAATTTCAA+TGG - chr4_2:62954666-62954685 Msa0614040:intron 35.0%
ATTTCGTGCAAAAGTTGGAA+AGG - chr4_2:62954813-62954832 Msa0614040:intron 35.0%
TTTCGTGCAAAAGTTGGAAA+GGG - chr4_2:62954814-62954833 Msa0614040:intron 35.0%
TTATGCCTTTATGTGGAAGT+TGG + chr4_2:62954843-62954862 None:intergenic 35.0%
TCAGGAATTATGCCTTTATG+TGG + chr4_2:62954850-62954869 None:intergenic 35.0%
GGCATAATTCCTGAAGAATT+TGG - chr4_2:62954856-62954875 Msa0614040:intron 35.0%
AATTCCTGAAGAATTTGGAG+TGG - chr4_2:62954861-62954880 Msa0614040:intron 35.0%
TTTCAGATTGCTCGCTATAA+AGG - chr4_2:62955045-62955064 Msa0614040:intron 35.0%
CTATAAAGGTGAAGGAAGAT+TGG - chr4_2:62955059-62955078 Msa0614040:intron 35.0%
TAAATAATTAGACCGAGCTC+GGG + chr4_2:62955156-62955175 None:intergenic 35.0%
CTAAATAATTAGACCGAGCT+CGG + chr4_2:62955157-62955176 None:intergenic 35.0%
! TTTTTGCAGCACATAAAAGC+AGG - chr4_2:62955246-62955265 Msa0614040:intron 35.0%
! TTTTGCAGCACATAAAAGCA+GGG - chr4_2:62955247-62955266 Msa0614040:intron 35.0%
CAATACACAAATCCAACAAC+AGG + chr4_2:62955273-62955292 None:intergenic 35.0%
CTGTTGTTGGATTTGTGTAT+TGG - chr4_2:62955271-62955290 Msa0614040:intron 35.0%
AGATGCAAAAAGGTTATGCT+AGG + chr4_2:62955506-62955525 None:intergenic 35.0%
GTTGTCAAACTCGAAATTCT+AGG - chr4_2:62955644-62955663 Msa0614040:intron 35.0%
TACGTATATATGTCACGCAT+AGG + chr4_2:62955772-62955791 None:intergenic 35.0%
GAACTATCGTTGTTTGAATG+AGG + chr4_2:62955801-62955820 None:intergenic 35.0%
TTTAGCACTAAAGTTATGGC+TGG - chr4_2:62955883-62955902 Msa0614040:intron 35.0%
TCAGAAGTTTACCGAAAAAG+AGG - chr4_2:62956102-62956121 Msa0614040:intron 35.0%
! CCATGTAAACTCCTCTTTTT+CGG + chr4_2:62956116-62956135 None:intergenic 35.0%
! GAGTTTACATGGTTGACTTA+AGG - chr4_2:62956124-62956143 Msa0614040:intron 35.0%
! TTTACATGGTTGACTTAAGG+TGG - chr4_2:62956127-62956146 Msa0614040:intron 35.0%
! TTACATGGTTGACTTAAGGT+GGG - chr4_2:62956128-62956147 Msa0614040:intron 35.0%
CTCGAACAAAAACCATTGAA+CGG - chr4_2:62956489-62956508 Msa0614040:intron 35.0%
TCGAACAAAAACCATTGAAC+GGG - chr4_2:62956490-62956509 Msa0614040:intron 35.0%
! CTTTGAAAAGGAAACATGAG+AGG - chr4_2:62956538-62956557 Msa0614040:intron 35.0%
! GAAGGAATCTATAGTTTGCA+TGG - chr4_2:62956599-62956618 Msa0614040:CDS 35.0%
CGTACTTTGTTACAAGTTTC+TGG - chr4_2:62956624-62956643 Msa0614040:CDS 35.0%
CAGCTATTCACATTAGCTAA+TGG - chr4_2:62956692-62956711 Msa0614040:intron 35.0%
AATTTGGAAAGGACTAAGTG+AGG + chr4_2:62956729-62956748 None:intergenic 35.0%
AGTTTGGGGACATTACTTAA+AGG - chr4_2:62956883-62956902 Msa0614040:intron 35.0%
GTCCTTGATAAACATGATGT+AGG - chr4_2:62956910-62956929 Msa0614040:intron 35.0%
ATGCAAGTCTCTACTTCATA+TGG - chr4_2:62956950-62956969 Msa0614040:intron 35.0%
GTGTGTTGTGGAATTATCTT+AGG + chr4_2:62957046-62957065 None:intergenic 35.0%
!! ATCGGTTTGAGAGTGTATTA+AGG + chr4_2:62957283-62957302 None:intergenic 35.0%
AGATCATGAAACCACTCTTT+GGG - chr4_2:62957336-62957355 Msa0614040:intron 35.0%
! TTTGACCTATCATGTCGATT+TGG - chr4_2:62957427-62957446 Msa0614040:intron 35.0%
AGTTCTTCGTACCTGATTTA+AGG - chr4_2:62957499-62957518 Msa0614040:intron 35.0%
CTTTATCCAATAAGTCTCAC+AGG - chr4_2:62957536-62957555 Msa0614040:intron 35.0%
!!! AGTTTTAGGTTACCTTCAGT+CGG + chr4_2:62957592-62957611 None:intergenic 35.0%
ACTACAATGAAGGTGAATTG+GGG - chr4_2:62957609-62957628 Msa0614040:intron 35.0%
AGTTCTTCGTACCTGATTTA+AGG - chr4_2:62957499-62957518 Msa0614040:intron 35.0%
! ACACTTGTTGACCTTAAATC+AGG + chr4_2:62957760-62957779 None:intergenic 35.0%
!!! AGTTTTAGGTTACCTTCAGT+TGG + chr4_2:62957592-62957611 None:intergenic 35.0%
AATTGGGTTTACCACAATGA+AGG - chr4_2:62957871-62957890 Msa0614040:intron 35.0%
TAGGAATTAGGATTCTAGTG+TGG - chr4_2:62957898-62957917 Msa0614040:intron 35.0%
ACTGTAGTTAGAAGGTGATT+GGG + chr4_2:62957962-62957981 None:intergenic 35.0%
TACTGTAGTTAGAAGGTGAT+TGG + chr4_2:62957963-62957982 None:intergenic 35.0%
TTTATCGGATGATTGTTGGT+GGG - chr4_2:62958065-62958084 Msa0614040:intron 35.0%
AGGTAAGGATCAAACTTAAC+AGG + chr4_2:62958177-62958196 None:intergenic 35.0%
!! ATAATGAGATGTTTTCAGGC+AGG + chr4_2:62958208-62958227 None:intergenic 35.0%
AATCTTATACATAAGGACGG+TGG + chr4_2:62958282-62958301 None:intergenic 35.0%
ACTAATACTGGACTTCCATA+AGG + chr4_2:62958340-62958359 None:intergenic 35.0%
GGAAGTCCAGTATTAGTATA+AGG - chr4_2:62958343-62958362 Msa0614040:intron 35.0%
TTATCTCAGATATGAGTGCT+TGG - chr4_2:62958501-62958520 Msa0614040:intron 35.0%
TATCTCAGATATGAGTGCTT+GGG - chr4_2:62958502-62958521 Msa0614040:intron 35.0%
CCCATTGTTTGTTTAGTGAT+AGG - chr4_2:62958571-62958590 Msa0614040:intron 35.0%
GCCTATCACTAAACAAACAA+TGG + chr4_2:62958575-62958594 None:intergenic 35.0%
TGGAAATTGAAGTGAGAACA+AGG + chr4_2:62958640-62958659 None:intergenic 35.0%
! CGCCAAAAGTAATACGATTT+TGG + chr4_2:62959045-62959064 None:intergenic 35.0%
!!! TGATTGTTGCTGTTTTCTGT+TGG - chr4_2:62959269-62959288 Msa0614040:intron 35.0%
AAGATATTATCCATCACTGC+AGG - chr4_2:62959333-62959352 Msa0614040:intron 35.0%
GCCACTACATGGTTAAATAA+AGG + chr4_2:62959547-62959566 None:intergenic 35.0%
! CAGCTTAGATTTTGAGCATT+GGG - chr4_2:62959663-62959682 Msa0614040:CDS 35.0%
ATACTTAGCCTAATGTGTAC+AGG - chr4_2:62959922-62959941 Msa0614040:five_prime_UTR 35.0%
TACTTAGCCTAATGTGTACA+GGG - chr4_2:62959923-62959942 Msa0614040:five_prime_UTR 35.0%
AATGAAACCCTGTACACATT+AGG + chr4_2:62959933-62959952 None:intergenic 35.0%
TGTGTGATTGGTGAAACATG+AGG + chr4_2:62946480-62946499 None:intergenic 40.0%
! GTGTAAGTGTTGTAGCTGAA+TGG + chr4_2:62946503-62946522 None:intergenic 40.0%
AAATTGAAGAAGCCATAGCG+GGG + chr4_2:62946562-62946581 None:intergenic 40.0%
GAAATTGAAGAAGCCATAGC+GGG + chr4_2:62946563-62946582 None:intergenic 40.0%
!!! GGTTTTGTTTTGGGAAAGTG+AGG + chr4_2:62946604-62946623 None:intergenic 40.0%
!!! GTTGTGGAGAGGTTTTGTTT+TGG + chr4_2:62946614-62946633 None:intergenic 40.0%
AGAGACATAACGGTTGAGAA+GGG + chr4_2:62946670-62946689 None:intergenic 40.0%
GAGTTGAGACAGAGACATAA+CGG + chr4_2:62946680-62946699 None:intergenic 40.0%
AACCACAACAGTACAAACGA+TGG - chr4_2:62946713-62946732 Msa0614040:three_prime_UTR 40.0%
ACCGGCGCTATTAAACAATT+CGG - chr4_2:62946782-62946801 Msa0614040:three_prime_UTR 40.0%
ACCGAATTGTTTAATAGCGC+CGG + chr4_2:62946786-62946805 None:intergenic 40.0%
TATATGATCTCGCTTAGGAG+AGG - chr4_2:62946809-62946828 Msa0614040:intron 40.0%
GTGATGTTCACGATGATGAT+TGG - chr4_2:62946855-62946874 Msa0614040:intron 40.0%
TTCACGATGATGATTGGGAT+TGG - chr4_2:62946861-62946880 Msa0614040:intron 40.0%
ACGTCTTCTCATTATCCTCA+AGG - chr4_2:62946925-62946944 Msa0614040:intron 40.0%
TTGAATGCAATCACATGGGT+TGG + chr4_2:62947313-62947332 None:intergenic 40.0%
ATCGACACCGGTAAAAATGT+GGG + chr4_2:62947351-62947370 None:intergenic 40.0%
TATCGACACCGGTAAAAATG+TGG + chr4_2:62947352-62947371 None:intergenic 40.0%
GTTACGTCATGCTGTATATG+TGG - chr4_2:62947492-62947511 Msa0614040:intron 40.0%
TGAAGAAGCTGCTAAGCTTA+AGG - chr4_2:62947522-62947541 Msa0614040:intron 40.0%
CAGCTAACAATGACAGTGTT+GGG - chr4_2:62947560-62947579 Msa0614040:intron 40.0%
AGAGAGCCATAAAAGAAGAG+CGG - chr4_2:62947711-62947730 Msa0614040:intron 40.0%
TTAAGAGATAAAGCTGGTGC+TGG - chr4_2:62947752-62947771 Msa0614040:intron 40.0%
GCTGGACTTGTAAGTTCTTA+TGG - chr4_2:62947770-62947789 Msa0614040:intron 40.0%
TGAATGTCTTTGCATTGTGG+TGG - chr4_2:62947816-62947835 Msa0614040:intron 40.0%
TAACAACAAATGCAGTAGCG+AGG + chr4_2:62947930-62947949 None:intergenic 40.0%
!! TCGCTACTGCATTTGTTGTT+AGG - chr4_2:62947929-62947948 Msa0614040:intron 40.0%
!! ACACATATATTGGCTCTTGC+AGG - chr4_2:62948362-62948381 Msa0614040:intron 40.0%
!! ATATATTGGCTCTTGCAGGT+GGG - chr4_2:62948366-62948385 Msa0614040:intron 40.0%
AAAGATGTGAACGATCCACA+TGG - chr4_2:62948408-62948427 Msa0614040:intron 40.0%
!! TTAGTTTCAGGTTGAGGTTG+GGG + chr4_2:62948561-62948580 None:intergenic 40.0%
CTGTTAGGTCTCTAATGTTG+AGG - chr4_2:62948706-62948725 Msa0614040:intron 40.0%
CAGTTAGACCGTAATGCTAA+AGG + chr4_2:62948743-62948762 None:intergenic 40.0%
! CACAAAGGCATAAATGTCAC+TGG + chr4_2:62949124-62949143 None:intergenic 40.0%
TCAACCGTAATTATACCCTG+CGG - chr4_2:62949166-62949185 Msa0614040:intron 40.0%
CATCTGAGTATAAAACCGCA+GGG + chr4_2:62949184-62949203 None:intergenic 40.0%
ACATCTGAGTATAAAACCGC+AGG + chr4_2:62949185-62949204 None:intergenic 40.0%
ATATCCCTCATCTTACAAGC+CGG - chr4_2:62949410-62949429 Msa0614040:intron 40.0%
!! AAAACCGGCTTGTAAGATGA+GGG + chr4_2:62949417-62949436 None:intergenic 40.0%
!! ATCTTACAAGCCGGTTTTGT+AGG - chr4_2:62949419-62949438 Msa0614040:intron 40.0%
!! TCTTACAAGCCGGTTTTGTA+GGG - chr4_2:62949420-62949439 Msa0614040:intron 40.0%
CTAAGTCAACCCTACAAAAC+CGG + chr4_2:62949432-62949451 None:intergenic 40.0%
CAAAACTAGCTGGTAAAGTG+AGG + chr4_2:62949500-62949519 None:intergenic 40.0%
!! CAAAATCGGCTTGAAAAGTG+AGG + chr4_2:62949636-62949655 None:intergenic 40.0%
AAAAGGTGACTTTAAGTCGC+AGG - chr4_2:62949844-62949863 Msa0614040:intron 40.0%
ATGGATCATTGCACTGAAGA+TGG - chr4_2:62949979-62949998 Msa0614040:intron 40.0%
TATGGAAATGAAGCCCTCTT+AGG - chr4_2:62950336-62950355 Msa0614040:intron 40.0%
TCGAGTTCCCCTAAATACTA+AGG - chr4_2:62950556-62950575 Msa0614040:intron 40.0%
AGTTCCCCTAAATACTAAGG+AGG - chr4_2:62950559-62950578 Msa0614040:intron 40.0%
TTGGGCCTCCTTAGTATTTA+GGG + chr4_2:62950567-62950586 None:intergenic 40.0%
ATTGGGCCTCCTTAGTATTT+AGG + chr4_2:62950568-62950587 None:intergenic 40.0%
TAAATACTAAGGAGGCCCAA+TGG - chr4_2:62950567-62950586 Msa0614040:intron 40.0%
AAATACTAAGGAGGCCCAAT+GGG - chr4_2:62950568-62950587 Msa0614040:intron 40.0%
ACCTACTCTCCTTCATGTAT+TGG - chr4_2:62950599-62950618 Msa0614040:intron 40.0%
ACCAATACATGAAGGAGAGT+AGG + chr4_2:62950603-62950622 None:intergenic 40.0%
CAAAAGAGTAATCTGGTCCA+AGG - chr4_2:62950908-62950927 Msa0614040:intron 40.0%
! CTTCTGAAAAAGGTCGATCA+CGG - chr4_2:62951537-62951556 Msa0614040:intron 40.0%
! TTCTGAAAAAGGTCGATCAC+GGG - chr4_2:62951538-62951557 Msa0614040:intron 40.0%
TTGTCAAACGGTTCTCATGA+AGG - chr4_2:62951609-62951628 Msa0614040:CDS 40.0%
CTGTGTACCTAAAGCGAAAA+GGG - chr4_2:62951904-62951923 Msa0614040:intron 40.0%
ATGGTTTAGAGGACGTTGTT+GGG + chr4_2:62951944-62951963 None:intergenic 40.0%
AATGGTTTAGAGGACGTTGT+TGG + chr4_2:62951945-62951964 None:intergenic 40.0%
AACAACGTCCTCTAAACCAT+TGG - chr4_2:62951944-62951963 Msa0614040:intron 40.0%
ACTAGCATCCAATGGTTTAG+AGG + chr4_2:62951955-62951974 None:intergenic 40.0%
TCTAAACCATTGGATGCTAG+TGG - chr4_2:62951954-62951973 Msa0614040:intron 40.0%
CTAAACCATTGGATGCTAGT+GGG - chr4_2:62951955-62951974 Msa0614040:intron 40.0%
! AGTACTGAAGATCCAGAAAG+TGG - chr4_2:62952029-62952048 Msa0614040:intron 40.0%
! ATCCAGAAAGTGGTGATGAT+AGG - chr4_2:62952039-62952058 Msa0614040:intron 40.0%
TTCCTATCATCACCACTTTC+TGG + chr4_2:62952044-62952063 None:intergenic 40.0%
! AGTGGTGATGATAGGAATGA+TGG - chr4_2:62952047-62952066 Msa0614040:intron 40.0%
AAAATCTTCACCTTCACACC+CGG + chr4_2:62952128-62952147 None:intergenic 40.0%
AGTGATAACTCCAGAGAAAG+TGG - chr4_2:62952151-62952170 Msa0614040:intron 40.0%
GGACAAGGATCTAATGTCTA+AGG - chr4_2:62952172-62952191 Msa0614040:intron 40.0%
ATTTGAGGAAGAAGAGAGTG+AGG - chr4_2:62952208-62952227 Msa0614040:intron 40.0%
TGACAGTGAAGATGAAGACA+AGG - chr4_2:62952286-62952305 Msa0614040:intron 40.0%
GGATCTGGAAGACATTAAGT+TGG - chr4_2:62952328-62952347 Msa0614040:intron 40.0%
! ATCTCTAGGGGATAAATTGC+TGG + chr4_2:62952474-62952493 None:intergenic 40.0%
AACTCGAAGCAAATCTCTAG+GGG + chr4_2:62952486-62952505 None:intergenic 40.0%
GAACTCGAAGCAAATCTCTA+GGG + chr4_2:62952487-62952506 None:intergenic 40.0%
TGAAAACGAAGTCAATCAGC+TGG - chr4_2:62952553-62952572 Msa0614040:intron 40.0%
GATGAAGATTTCCCTTTGTC+AGG + chr4_2:62952584-62952603 None:intergenic 40.0%
! CAAGGATAAAGTACCTGCAA+AGG - chr4_2:62952676-62952695 Msa0614040:intron 40.0%
! GATAAAGTACCTGCAAAGGT+TGG - chr4_2:62952680-62952699 Msa0614040:intron 40.0%
AATACTTAGCCAACCTTTGC+AGG + chr4_2:62952692-62952711 None:intergenic 40.0%
!! AATCTTGTAGGTGCTGAAAG+AGG - chr4_2:62952812-62952831 Msa0614040:intron 40.0%
TGAGACGTAGATATGGTCAA+TGG - chr4_2:62953126-62953145 Msa0614040:intron 40.0%
TAGATATGGTCAATGGCAAG+AGG - chr4_2:62953133-62953152 Msa0614040:intron 40.0%
AGAAGCCTTGAAAATAACCG+GGG - chr4_2:62953202-62953221 Msa0614040:intron 40.0%
ATATATGCAATACACCCACC+TGG - chr4_2:62953329-62953348 Msa0614040:CDS 40.0%
TATATGCAATACACCCACCT+GGG - chr4_2:62953330-62953349 Msa0614040:CDS 40.0%
GTCTATATTAGAGGGAGTGA+GGG + chr4_2:62953688-62953707 None:intergenic 40.0%
AGTCTATATTAGAGGGAGTG+AGG + chr4_2:62953689-62953708 None:intergenic 40.0%
ATCTCCATGGTTTGACACAT+GGG + chr4_2:62953738-62953757 None:intergenic 40.0%
TCTTAGAAATGCCATCTCCA+TGG + chr4_2:62953751-62953770 None:intergenic 40.0%
! AAGCATCCTGGTCCATTTTA+GGG - chr4_2:62953875-62953894 Msa0614040:CDS 40.0%
ACTATACCCACACTGCAAAT+CGG - chr4_2:62953960-62953979 Msa0614040:CDS 40.0%
AGAAGTAGTTTGGTACAGCA+AGG - chr4_2:62954220-62954239 Msa0614040:CDS 40.0%
CTTAAGCTGGCAATTGTTCT+AGG - chr4_2:62954291-62954310 Msa0614040:CDS 40.0%
! ACAAACCAAGTTGAAAGGCT+GGG + chr4_2:62954480-62954499 None:intergenic 40.0%
GGAAACAGTCAGATATGATG+TGG - chr4_2:62954647-62954666 Msa0614040:intron 40.0%
! GTGAAATGTGTGGTCTCTTT+TGG - chr4_2:62954718-62954737 Msa0614040:intron 40.0%
TTCGTGCAAAAGTTGGAAAG+GGG - chr4_2:62954815-62954834 Msa0614040:intron 40.0%
CATACCACTCCAAATTCTTC+AGG + chr4_2:62954868-62954887 None:intergenic 40.0%
AGTAGAGAATGGAGATAGCA+AGG + chr4_2:62954935-62954954 None:intergenic 40.0%
AATTTGGAGGGAGTAGAGAA+TGG + chr4_2:62954946-62954965 None:intergenic 40.0%
ATTGCTCGCTATAAAGGTGA+AGG - chr4_2:62955051-62955070 Msa0614040:intron 40.0%
ACTGGTGATTCTTGATGGAA+AGG - chr4_2:62955122-62955141 Msa0614040:intron 40.0%
AGGTGGAATTACAACAGCAA+AGG + chr4_2:62955180-62955199 None:intergenic 40.0%
AAATTGCACCGAAGTAAAGG+TGG + chr4_2:62955197-62955216 None:intergenic 40.0%
!!! GGCTCCTGAGTATCATTTTT+TGG - chr4_2:62955293-62955312 Msa0614040:intron 40.0%
!!! TGGTCTTTTTCAATCGGCTT+AGG - chr4_2:62955313-62955332 Msa0614040:intron 40.0%
AGCTGGCGAATAAAGCTATA+AGG + chr4_2:62955426-62955445 None:intergenic 40.0%
ATGCTAGGCTATGCATAAGT+TGG + chr4_2:62955491-62955510 None:intergenic 40.0%
TTTAGCACGCAGTTTCCTAA+AGG - chr4_2:62955563-62955582 Msa0614040:intron 40.0%
ACTTGGACCCATCAATTATC+TGG + chr4_2:62955619-62955638 None:intergenic 40.0%
! AATTGATGGGTCCAAGTGTA+AGG - chr4_2:62955622-62955641 Msa0614040:intron 40.0%
GAGTTTGACAACCTTACACT+TGG + chr4_2:62955636-62955655 None:intergenic 40.0%
CGAAATTCTAGGTAAACCTG+TGG - chr4_2:62955655-62955674 Msa0614040:intron 40.0%
ATTTGAGTCTACGACTACGT+AGG + chr4_2:62955683-62955702 None:intergenic 40.0%
!! CTTATGCTTTAAGATGGAGC+TGG + chr4_2:62955830-62955849 None:intergenic 40.0%
CCGAAAAAGAGGAGTTTACA+TGG - chr4_2:62956113-62956132 Msa0614040:intron 40.0%
ACATCGCATGGACAAATAAC+TGG + chr4_2:62956194-62956213 None:intergenic 40.0%
GATGTCAGCTTACAGCTTAA+AGG - chr4_2:62956209-62956228 Msa0614040:intron 40.0%
TCAGCTTACAGCTTAAAGGA+CGG - chr4_2:62956213-62956232 Msa0614040:intron 40.0%
TTCTCATTAAGCCCGTTCAA+TGG + chr4_2:62956504-62956523 None:intergenic 40.0%
AGGTGGCCTCGTAAAAATAT+GGG - chr4_2:62956662-62956681 Msa0614040:intron 40.0%
ATTTCTTTCTGGGTGTGTTG+TGG + chr4_2:62957058-62957077 None:intergenic 40.0%
GAGATCATGAAACCACTCTT+TGG - chr4_2:62957335-62957354 Msa0614040:intron 40.0%
GCAATCCAAATCGACATGAT+AGG + chr4_2:62957435-62957454 None:intergenic 40.0%
GAACTCAAGAGGCTATTGTA+TGG + chr4_2:62957484-62957503 None:intergenic 40.0%
! GTACCTGATTTAAGGTCAAC+AGG - chr4_2:62957507-62957526 Msa0614040:intron 40.0%
ACACCTGTTGACCTTAAATC+AGG + chr4_2:62957513-62957532 None:intergenic 40.0%
CTATCTCCTGTGAGACTTAT+TGG + chr4_2:62957545-62957564 None:intergenic 40.0%
AATGAAGGTGGCTAGGAATT+AGG - chr4_2:62957640-62957659 Msa0614040:intron 40.0%
GAACTCAAGAGGCTATTGTA+TGG + chr4_2:62957484-62957503 None:intergenic 40.0%
CTCTATCCAATAAGTCTCAC+AGG - chr4_2:62957783-62957802 Msa0614040:intron 40.0%
CTATCTCCTGTGAGACTTAT+TGG + chr4_2:62957545-62957564 None:intergenic 40.0%
AATGAAGGTGGCTAGGAATT+AGG - chr4_2:62957640-62957659 Msa0614040:intron 40.0%
ATTCTAGTGTGGAAGTTCCA+AGG - chr4_2:62957909-62957928 Msa0614040:intron 40.0%
CTTTATCGGATGATTGTTGG+TGG - chr4_2:62958064-62958083 Msa0614040:intron 40.0%
GAAAGTCATCCCAACTATGT+TGG + chr4_2:62958098-62958117 None:intergenic 40.0%
!!! TTTTCAGGCAGGTTGGTATT+AGG + chr4_2:62958197-62958216 None:intergenic 40.0%
TACCTCATGACATGAGTACT+TGG - chr4_2:62958404-62958423 Msa0614040:intron 40.0%
ACCTCATGACATGAGTACTT+GGG - chr4_2:62958405-62958424 Msa0614040:intron 40.0%
! AGCAACAGAAGTTTTCCTTC+CGG - chr4_2:62959101-62959120 Msa0614040:intron 40.0%
CCATAGCACTTAACAACAAC+CGG + chr4_2:62959123-62959142 None:intergenic 40.0%
! ACTGCAGGCTTTTCTGTTTA+AGG - chr4_2:62959348-62959367 Msa0614040:intron 40.0%
!! ACCATGTAGTGGCTGTTTTA+TGG - chr4_2:62959554-62959573 Msa0614040:CDS 40.0%
ACCATAAAACAGCCACTACA+TGG + chr4_2:62959558-62959577 None:intergenic 40.0%
GTGTAAAATAGCTTTCTGCC+AGG - chr4_2:62959640-62959659 Msa0614040:CDS 40.0%
! GCAGCTTAGATTTTGAGCAT+TGG - chr4_2:62959662-62959681 Msa0614040:CDS 40.0%
CTCTCCATTCTACGTATTGT+AGG - chr4_2:62959805-62959824 Msa0614040:CDS 40.0%
TCCATTCTACGTATTGTAGG+TGG - chr4_2:62959808-62959827 Msa0614040:CDS 40.0%
ACCACCTACAATACGTAGAA+TGG + chr4_2:62959812-62959831 None:intergenic 40.0%
GTAGCTGAATGGTGTGTGAT+TGG + chr4_2:62946492-62946511 None:intergenic 45.0%
!!! TGTTTTGGGAAAGTGAGGTG+TGG + chr4_2:62946599-62946618 None:intergenic 45.0%
GAAGTGAAGGACGTTTGAGA+GGG + chr4_2:62946640-62946659 None:intergenic 45.0%
AGAAGTGAAGGACGTTTGAG+AGG + chr4_2:62946641-62946660 None:intergenic 45.0%
GAAGGGAAGTGAAGAAGTGA+AGG + chr4_2:62946653-62946672 None:intergenic 45.0%
CAGAGACATAACGGTTGAGA+AGG + chr4_2:62946671-62946690 None:intergenic 45.0%
TGTACTGTTGTGGTTGTCGT+CGG + chr4_2:62946708-62946727 None:intergenic 45.0%
AACAGTACAAACGATGGCGA+CGG - chr4_2:62946719-62946738 Msa0614040:three_prime_UTR 45.0%
ATGCTCAGCGAATTCGTAAC+CGG - chr4_2:62946764-62946783 Msa0614040:three_prime_UTR 45.0%
CGTCTTCTTTATCAGCAGCA+CGG + chr4_2:62946835-62946854 None:intergenic 45.0%
! CGTGCTGCTGATAAAGAAGA+CGG - chr4_2:62946833-62946852 Msa0614040:intron 45.0%
ATGATTGGGATTGGAATCGC+TGG - chr4_2:62946870-62946889 Msa0614040:intron 45.0%
!! TTTCGATCAGGTTGATGACC+AGG - chr4_2:62946901-62946920 Msa0614040:intron 45.0%
GGATAATGAGAAGACGTTCC+TGG + chr4_2:62946922-62946941 None:intergenic 45.0%
TCGACACCGGTAAAAATGTG+GGG + chr4_2:62947350-62947369 None:intergenic 45.0%
CAACACTGACATATCGACAC+CGG + chr4_2:62947363-62947382 None:intergenic 45.0%
ACGTCATGCTGTATATGTGG+AGG - chr4_2:62947495-62947514 Msa0614040:intron 45.0%
AGAAGCTGCTAAGCTTAAGG+TGG - chr4_2:62947525-62947544 Msa0614040:intron 45.0%
GCAGCTAACAATGACAGTGT+TGG - chr4_2:62947559-62947578 Msa0614040:intron 45.0%
!! CATATATTGGCTCTTGCAGG+TGG - chr4_2:62948365-62948384 Msa0614040:intron 45.0%
ATTCGCATAACTCCAGAGCA+TGG - chr4_2:62948438-62948457 Msa0614040:intron 45.0%
TCCAGAGCATGGAAGATATG+TGG - chr4_2:62948449-62948468 Msa0614040:intron 45.0%
AGCATGGAAGATATGTGGCA+AGG - chr4_2:62948454-62948473 Msa0614040:intron 45.0%
TGGCAAGGAGTTATAGTCCT+AGG - chr4_2:62948469-62948488 Msa0614040:intron 45.0%
!! TTCGGGATAAAAGGGGTGTT+CGG - chr4_2:62948605-62948624 Msa0614040:intron 45.0%
! AGTCTGTAAAGCATCCGTCT+CGG - chr4_2:62948674-62948693 Msa0614040:intron 45.0%
AACAGAAACACAAGCCGAGA+CGG + chr4_2:62948691-62948710 None:intergenic 45.0%
! TCTCGGCTTGTGTTTCTGTT+AGG - chr4_2:62948691-62948710 Msa0614040:intron 45.0%
!! CAAAACCGGCTTGTAAGATG+AGG + chr4_2:62949418-62949437 None:intergenic 45.0%
!! CGGTTTTGTAGGGTTGACTT+AGG - chr4_2:62949430-62949449 Msa0614040:intron 45.0%
AGTCATAATGCTTGCGGAAC+TGG - chr4_2:62950115-62950134 Msa0614040:intron 45.0%
GTCATAATGCTTGCGGAACT+GGG - chr4_2:62950116-62950135 Msa0614040:intron 45.0%
TGGGCCTCCTTAGTATTTAG+GGG + chr4_2:62950566-62950585 None:intergenic 45.0%
AATACTAAGGAGGCCCAATG+GGG - chr4_2:62950569-62950588 Msa0614040:intron 45.0%
GTAGGTTAGCATTCCCCATT+GGG + chr4_2:62950585-62950604 None:intergenic 45.0%
AGTAGGTTAGCATTCCCCAT+TGG + chr4_2:62950586-62950605 None:intergenic 45.0%
AGAGTAATCTGGTCCAAGGA+AGG - chr4_2:62950912-62950931 Msa0614040:intron 45.0%
GAGTAATCTGGTCCAAGGAA+GGG - chr4_2:62950913-62950932 Msa0614040:intron 45.0%
AGTAATCTGGTCCAAGGAAG+GGG - chr4_2:62950914-62950933 Msa0614040:intron 45.0%
! AAATGGATTTGCCCCTTCCT+TGG + chr4_2:62950928-62950947 None:intergenic 45.0%
GCTGTGTACCTAAAGCGAAA+AGG - chr4_2:62951903-62951922 Msa0614040:intron 45.0%
TGGTTTAGAGGACGTTGTTG+GGG + chr4_2:62951943-62951962 None:intergenic 45.0%
TAGTGGGAGATCGAGTTCAA+TGG - chr4_2:62951971-62951990 Msa0614040:intron 45.0%
AGATATGATTCCGGGTGTGA+AGG - chr4_2:62952115-62952134 Msa0614040:intron 45.0%
AACTCCAGAGAAAGTGGACA+AGG - chr4_2:62952157-62952176 Msa0614040:intron 45.0%
AGATCCTTGTCCACTTTCTC+TGG + chr4_2:62952164-62952183 None:intergenic 45.0%
ACTGATCAAGAGGGAGATGA+TGG - chr4_2:62952353-62952372 Msa0614040:intron 45.0%
CTGATCAAGAGGGAGATGAT+GGG - chr4_2:62952354-62952373 Msa0614040:intron 45.0%
GCTGTCAAAGTTGTCATTGG+TGG - chr4_2:62952431-62952450 Msa0614040:intron 45.0%
GGAACTCGAAGCAAATCTCT+AGG + chr4_2:62952488-62952507 None:intergenic 45.0%
AACGAAGTCAATCAGCTGGA+TGG - chr4_2:62952557-62952576 Msa0614040:intron 45.0%
!! TTGTAGGTGCTGAAAGAGGT+AGG - chr4_2:62952816-62952835 Msa0614040:intron 45.0%
GATAAGTCTCACTCTAAGCC+AGG - chr4_2:62952845-62952864 Msa0614040:intron 45.0%
!! ATGGTTGATGATTCTGAGCC+TGG + chr4_2:62952866-62952885 None:intergenic 45.0%
TATGGTCAATGGCAAGAGGA+CGG - chr4_2:62953137-62953156 Msa0614040:intron 45.0%
!! AGGATCCCCGGTTATTTTCA+AGG + chr4_2:62953210-62953229 None:intergenic 45.0%
TGAACCCATGTGTCAAACCA+TGG - chr4_2:62953731-62953750 Msa0614040:intron 45.0%
CATCTCCATGGTTTGACACA+TGG + chr4_2:62953739-62953758 None:intergenic 45.0%
CATGTGTCAAACCATGGAGA+TGG - chr4_2:62953737-62953756 Msa0614040:intron 45.0%
AAAATGGACCAGGATGCTTC+CGG + chr4_2:62953874-62953893 None:intergenic 45.0%
!! GAAGCATCCTGGTCCATTTT+AGG - chr4_2:62953874-62953893 Msa0614040:CDS 45.0%
!! AAGTCACCGATTTGCAGTGT+GGG + chr4_2:62953969-62953988 None:intergenic 45.0%
!! TAAGTCACCGATTTGCAGTG+TGG + chr4_2:62953970-62953989 None:intergenic 45.0%
! TTTGAAGCTCAACAGCACAC+AGG + chr4_2:62954109-62954128 None:intergenic 45.0%
GTTGAGCTTCAAACAGCTCA+TGG - chr4_2:62954116-62954135 Msa0614040:CDS 45.0%
! GACAAACCAAGTTGAAAGGC+TGG + chr4_2:62954481-62954500 None:intergenic 45.0%
TCATGTTCCTTGATCCCCTT+AGG - chr4_2:62954786-62954805 Msa0614040:intron 45.0%
TTGCACGAAATGCCACCTAA+GGG + chr4_2:62954804-62954823 None:intergenic 45.0%
TTTGCACGAAATGCCACCTA+AGG + chr4_2:62954805-62954824 None:intergenic 45.0%
GTGGCATTTCGTGCAAAAGT+TGG - chr4_2:62954808-62954827 Msa0614040:intron 45.0%
GGGTACCAACTTCCACATAA+AGG - chr4_2:62954835-62954854 Msa0614040:intron 45.0%
AGGGTTTCAGAATCCTCGAT+GGG - chr4_2:62955089-62955108 Msa0614040:intron 45.0%
GGTGAACTGGTGATTCTTGA+TGG - chr4_2:62955117-62955136 Msa0614040:intron 45.0%
AAGGTTTGTATTCCCGAGCT+CGG - chr4_2:62955141-62955160 Msa0614040:intron 45.0%
ATAAAAGCAGGGCCTGTTGT+TGG - chr4_2:62955258-62955277 Msa0614040:intron 45.0%
CACGCAGTTTCCTAAAGGTA+TGG - chr4_2:62955568-62955587 Msa0614040:intron 45.0%
ACAACAGATGTGACATGAGC+TGG - chr4_2:62956157-62956176 Msa0614040:intron 45.0%
ACCAGTTTACTACTGTCCTC+GGG + chr4_2:62956251-62956270 None:intergenic 45.0%
GACCAGTTTACTACTGTCCT+CGG + chr4_2:62956252-62956271 None:intergenic 45.0%
! TTTTTACGAGGCCACCTGAT+GGG + chr4_2:62956659-62956678 None:intergenic 45.0%
! ATTTTTACGAGGCCACCTGA+TGG + chr4_2:62956660-62956679 None:intergenic 45.0%
CAGGTGGCCTCGTAAAAATA+TGG - chr4_2:62956661-62956680 Msa0614040:intron 45.0%
ATTCACACGCAAGTCCATCT+TGG + chr4_2:62956832-62956851 None:intergenic 45.0%
! TACGACGTTTTCCCAAAGAG+TGG + chr4_2:62957350-62957369 None:intergenic 45.0%
TCAGGTACGAAGAACTCAAG+AGG + chr4_2:62957495-62957514 None:intergenic 45.0%
ATTGGGGTTTACCGCAATGA+AGG - chr4_2:62957625-62957644 Msa0614040:intron 45.0%
ATTCCTAGCCACCTTCATTG+CGG + chr4_2:62957639-62957658 None:intergenic 45.0%
TCAGGTACGAAGAACTCAAG+AGG + chr4_2:62957495-62957514 None:intergenic 45.0%
!! TATGAAGGCACTCCAACTGA+AGG - chr4_2:62957824-62957843 Msa0614040:intron 45.0%
TGGGTTTACCACAATGAAGG+TGG - chr4_2:62957874-62957893 Msa0614040:intron 45.0%
TTACCACAATGAAGGTGGCT+AGG - chr4_2:62957879-62957898 Msa0614040:intron 45.0%
ATTCCTAGCCACCTTCATTG+TGG + chr4_2:62957639-62957658 None:intergenic 45.0%
!! AGGCAGGTTGGTATTAGGTA+AGG + chr4_2:62958192-62958211 None:intergenic 45.0%
!! TGAGATGTTTTCAGGCAGGT+TGG + chr4_2:62958204-62958223 None:intergenic 45.0%
ACCCAAGTACTCATGTCATG+AGG + chr4_2:62958409-62958428 None:intergenic 45.0%
GACATGAGTACTTGGGTAAG+TGG - chr4_2:62958412-62958431 Msa0614040:intron 45.0%
TGAGTACTTGGGTAAGTGGT+TGG - chr4_2:62958416-62958435 Msa0614040:intron 45.0%
GAGTACTTGGGTAAGTGGTT+GGG - chr4_2:62958417-62958436 Msa0614040:intron 45.0%
TGAGTGCTTGGGTAAGTGTT+TGG - chr4_2:62958513-62958532 Msa0614040:intron 45.0%
AGCACTTAACAACAACCGGA+AGG + chr4_2:62959119-62959138 None:intergenic 45.0%
! CCGGTTGTTGTTAAGTGCTA+TGG - chr4_2:62959120-62959139 Msa0614040:intron 45.0%
!!! TGCTGTTTTCTGTTGGTTCC+AGG - chr4_2:62959276-62959295 Msa0614040:intron 45.0%
ACTTAGCATTCCTCGAAACC+TGG + chr4_2:62959297-62959316 None:intergenic 45.0%
AACAGAAAAGCCTGCAGTGA+TGG + chr4_2:62959346-62959365 None:intergenic 45.0%
! CTAATTATACGTGTCGGCCA+TGG - chr4_2:62959396-62959415 Msa0614040:intron 45.0%
TGCTCAAAATCTAAGCTGCC+TGG + chr4_2:62959661-62959680 None:intergenic 45.0%
TAGGTGGTGTAGTGTTCACA+TGG - chr4_2:62959824-62959843 Msa0614040:CDS 45.0%
!! AAAATTAATAATATCAAATA+AGG + chr4_2:62955027-62955046 None:intergenic 5.0%
!! TTTATATACATTTATAAATT+TGG + chr4_2:62956745-62956764 None:intergenic 5.0%
TCATTTCTTCGACCCCGCTA+TGG - chr4_2:62946547-62946566 Msa0614040:three_prime_UTR 50.0%
ACGTTTGAGAGGGAAGGTTG+TGG + chr4_2:62946630-62946649 None:intergenic 50.0%
TGAAGGACGTTTGAGAGGGA+AGG + chr4_2:62946636-62946655 None:intergenic 50.0%
CGCCATCGTTTGTACTGTTG+TGG + chr4_2:62946718-62946737 None:intergenic 50.0%
GTTAGCTGCTCACCTTGTTC+TGG - chr4_2:62947276-62947295 Msa0614040:intron 50.0%
GCCACATATCTTCCATGCTC+TGG + chr4_2:62948453-62948472 None:intergenic 50.0%
!! TCGGGATAAAAGGGGTGTTC+GGG - chr4_2:62948606-62948625 Msa0614040:intron 50.0%
! TTGTAGGGTTGACTTAGGCC+CGG - chr4_2:62949435-62949454 Msa0614040:intron 50.0%
TATTCTGCCACTACCGTGTG+TGG - chr4_2:62949724-62949743 Msa0614040:intron 50.0%
ACAGAAACCACACACGGTAG+TGG + chr4_2:62949734-62949753 None:intergenic 50.0%
CAACTTGCAACATCTGCTGC+TGG - chr4_2:62949785-62949804 Msa0614040:intron 50.0%
CGCAGGTATCTCTACTTGAC+TGG - chr4_2:62949861-62949880 Msa0614040:intron 50.0%
! GGTAGGACCCTTTTCGCTTT+AGG + chr4_2:62951914-62951933 None:intergenic 50.0%
AAGCGAAAAGGGTCCTACCA+CGG - chr4_2:62951915-62951934 Msa0614040:intron 50.0%
GGTTTAGAGGACGTTGTTGG+GGG + chr4_2:62951942-62951961 None:intergenic 50.0%
GATCTCCCACTAGCATCCAA+TGG + chr4_2:62951963-62951982 None:intergenic 50.0%
TCCTGCTAAGCTGGAGATCA+AGG - chr4_2:62952505-62952524 Msa0614040:intron 50.0%
TCCTTGATCTCCAGCTTAGC+AGG + chr4_2:62952509-62952528 None:intergenic 50.0%
AGCTGGATGGTCCTGACAAA+GGG - chr4_2:62952570-62952589 Msa0614040:intron 50.0%
TCAATGGCAAGAGGACGGTA+GGG - chr4_2:62953142-62953161 Msa0614040:intron 50.0%
AGCTGGTACATAAGGATCCC+CGG + chr4_2:62953222-62953241 None:intergenic 50.0%
CATGATATTACCTGGCCAGC+TGG + chr4_2:62953239-62953258 None:intergenic 50.0%
! CCTCTCATTTTCTCCCAGGT+GGG + chr4_2:62953346-62953365 None:intergenic 50.0%
! TCCTCTCATTTTCTCCCAGG+TGG + chr4_2:62953347-62953366 None:intergenic 50.0%
ACCTGGGAGAAAATGAGAGG+AGG - chr4_2:62953346-62953365 Msa0614040:CDS 50.0%
CCTGGGAGAAAATGAGAGGA+GGG - chr4_2:62953347-62953366 Msa0614040:CDS 50.0%
CTGGGAGAAAATGAGAGGAG+GGG - chr4_2:62953348-62953367 Msa0614040:CDS 50.0%
TGGGAGAAAATGAGAGGAGG+GGG - chr4_2:62953349-62953368 Msa0614040:CDS 50.0%
!! AGTTGTAACCGGAAGCATCC+TGG - chr4_2:62953863-62953882 Msa0614040:CDS 50.0%
AGGAGACCCTAAAATGGACC+AGG + chr4_2:62953884-62953903 None:intergenic 50.0%
GGTGCCCTAGATCTTTGCAT+AGG + chr4_2:62954044-62954063 None:intergenic 50.0%
TGTTCCTTGATCCCCTTAGG+TGG - chr4_2:62954789-62954808 Msa0614040:intron 50.0%
AATGCCACCTAAGGGGATCA+AGG + chr4_2:62954796-62954815 None:intergenic 50.0%
TGCACGAAATGCCACCTAAG+GGG + chr4_2:62954803-62954822 None:intergenic 50.0%
AAGGAAGATTGGCAGAGCCA+GGG - chr4_2:62955070-62955089 Msa0614040:intron 50.0%
!! CATCGAGGATTCTGAAACCC+TGG + chr4_2:62955090-62955109 None:intergenic 50.0%
CAGGGTTTCAGAATCCTCGA+TGG - chr4_2:62955088-62955107 Msa0614040:intron 50.0%
!! CAGAATCCTCGATGGGTTGA+CGG - chr4_2:62955096-62955115 Msa0614040:intron 50.0%
TCGGCTTAGGCTTCAACAGT+AGG - chr4_2:62955326-62955345 Msa0614040:intron 50.0%
TACGACTACGTAGGATCCAC+AGG + chr4_2:62955674-62955693 None:intergenic 50.0%
!! CGTAGACTCAAATCGACTCG+TGG - chr4_2:62955690-62955709 Msa0614040:intron 50.0%
AGCTGTAAGCTGACATCGCA+TGG + chr4_2:62956206-62956225 None:intergenic 50.0%
AGTTTACTACTGTCCTCGGG+GGG + chr4_2:62956248-62956267 None:intergenic 50.0%
CAGTTTACTACTGTCCTCGG+GGG + chr4_2:62956249-62956268 None:intergenic 50.0%
CCAGTTTACTACTGTCCTCG+GGG + chr4_2:62956250-62956269 None:intergenic 50.0%
! ACGGGCTTAATGAGAAGCAC+AGG - chr4_2:62956508-62956527 Msa0614040:intron 50.0%
! TTTTACGAGGCCACCTGATG+GGG + chr4_2:62956658-62956677 None:intergenic 50.0%
!! TATGAAGGCACTCCGACTGA+AGG - chr4_2:62957577-62957596 Msa0614040:intron 50.0%
TTACCGCAATGAAGGTGGCT+AGG - chr4_2:62957633-62957652 Msa0614040:intron 50.0%
!! TCTGTTGGTTCCAGGTTTCG+AGG - chr4_2:62959284-62959303 Msa0614040:intron 50.0%
TGGGAAAGTGAGGTGTGGAG+TGG + chr4_2:62946594-62946613 None:intergenic 55.0%
TGAGAGGGAAGGTTGTGGAG+AGG + chr4_2:62946625-62946644 None:intergenic 55.0%
GTTGTGGTTGTCGTCGGAGA+CGG + chr4_2:62946702-62946721 None:intergenic 55.0%
CTGGCGTCAGCATTTCGATC+AGG - chr4_2:62946889-62946908 Msa0614040:intron 55.0%
GTGACGACGTGACCAGAACA+AGG + chr4_2:62947291-62947310 None:intergenic 55.0%
! ATTGGCTCTTGCAGGTGGGT+TGG - chr4_2:62948370-62948389 Msa0614040:intron 55.0%
GCACCAAGCCCAGTAGTGTT+GGG - chr4_2:62949534-62949553 Msa0614040:intron 55.0%
ATCCAGGCATTCCCTCAGCA+GGG + chr4_2:62952079-62952098 None:intergenic 55.0%
AATCCAGGCATTCCCTCAGC+AGG + chr4_2:62952080-62952099 None:intergenic 55.0%
! GATGACGGCGATGAAGACGA+CGG - chr4_2:62952251-62952270 Msa0614040:intron 55.0%
! GCTTCGAGTTCCTGCTAAGC+TGG - chr4_2:62952496-62952515 Msa0614040:intron 55.0%
CAGCTGGATGGTCCTGACAA+AGG - chr4_2:62952569-62952588 Msa0614040:intron 55.0%
GTCAATGGCAAGAGGACGGT+AGG - chr4_2:62953141-62953160 Msa0614040:intron 55.0%
GGGGATCCTTATGTACCAGC+TGG - chr4_2:62953221-62953240 Msa0614040:CDS 55.0%
TCCTTATGTACCAGCTGGCC+AGG - chr4_2:62953226-62953245 Msa0614040:CDS 55.0%
ACCTGGCCAGCTGGTACATA+AGG + chr4_2:62953230-62953249 None:intergenic 55.0%
CCCACCTGGGAGAAAATGAG+AGG - chr4_2:62953343-62953362 Msa0614040:CDS 55.0%
! CCCTCCTCTCATTTTCTCCC+AGG + chr4_2:62953350-62953369 None:intergenic 55.0%
GGGAGAAAATGAGAGGAGGG+GGG - chr4_2:62953350-62953369 Msa0614040:CDS 55.0%
CAGCAAGGCTAGTGATGTGC+TGG - chr4_2:62954235-62954254 Msa0614040:CDS 55.0%
TGCTGCCCAGCCTTTCAACT+TGG - chr4_2:62954472-62954491 Msa0614040:CDS 55.0%
GAAGGAAGATTGGCAGAGCC+AGG - chr4_2:62955069-62955088 Msa0614040:intron 55.0%
AGTTCACCGTCAACCCATCG+AGG + chr4_2:62955105-62955124 None:intergenic 55.0%
!! TCGATGGGTTGACGGTGAAC+TGG - chr4_2:62955104-62955123 Msa0614040:intron 55.0%
ACGGAATTCAAATCCCCCCG+AGG - chr4_2:62956232-62956251 Msa0614040:intron 55.0%
CCCCGAGGACAGTAGTAAAC+TGG - chr4_2:62956247-62956266 Msa0614040:intron 55.0%
TCTGGTTGAACCTCCCCATC+AGG - chr4_2:62956642-62956661 Msa0614040:CDS 55.0%
GGGGTTTACCGCAATGAAGG+TGG - chr4_2:62957628-62957647 Msa0614040:intron 55.0%
! CGGATGATTGTTGGTGGGAG+TGG - chr4_2:62958070-62958089 Msa0614040:intron 55.0%
GGAGTGGCGCCAACATAGTT+GGG - chr4_2:62958086-62958105 Msa0614040:intron 55.0%
ATGGCGACGGTAACAACCGC+CGG - chr4_2:62946732-62946751 Msa0614040:three_prime_UTR 60.0%
!! TGAGCATCGAATCCCACCGG+CGG + chr4_2:62946751-62946770 None:intergenic 60.0%
!! CGCTGAGCATCGAATCCCAC+CGG + chr4_2:62946754-62946773 None:intergenic 60.0%
TGCAGCAGCTACGCACCTTG+AGG + chr4_2:62946943-62946962 None:intergenic 60.0%
!! GCTCTTGCAGGTGGGTTGGT+GGG - chr4_2:62948374-62948393 Msa0614040:intron 60.0%
GGCACCAAGCCCAGTAGTGT+TGG - chr4_2:62949533-62949552 Msa0614040:intron 60.0%
ACGCCCAACACTACTGGGCT+TGG + chr4_2:62949540-62949559 None:intergenic 60.0%
CCCTCACGCCCAACACTACT+GGG + chr4_2:62949545-62949564 None:intergenic 60.0%
! CCCAGTAGTGTTGGGCGTGA+GGG - chr4_2:62949542-62949561 Msa0614040:intron 60.0%
! CCAGTAGTGTTGGGCGTGAG+GGG - chr4_2:62949543-62949562 Msa0614040:intron 60.0%
! CAGTAGTGTTGGGCGTGAGG+GGG - chr4_2:62949544-62949563 Msa0614040:intron 60.0%
! TTGGGCGTGAGGGGGTGTAT+TGG - chr4_2:62949552-62949571 Msa0614040:intron 60.0%
! TGGGCGTGAGGGGGTGTATT+GGG - chr4_2:62949553-62949572 Msa0614040:intron 60.0%
!! TGATGGCTCTGACCCTGCTG+AGG - chr4_2:62952064-62952083 Msa0614040:intron 60.0%
!! GATGGCTCTGACCCTGCTGA+GGG - chr4_2:62952065-62952084 Msa0614040:intron 60.0%
GGTTGAACCTCCCCATCAGG+TGG - chr4_2:62956645-62956664 Msa0614040:CDS 60.0%
GGGAGTGGCGCCAACATAGT+TGG - chr4_2:62958085-62958104 Msa0614040:intron 60.0%
CGACGGTAACAACCGCCGGT+GGG - chr4_2:62946736-62946755 Msa0614040:three_prime_UTR 65.0%
!! GGCTCTTGCAGGTGGGTTGG+TGG - chr4_2:62948373-62948392 Msa0614040:intron 65.0%
!! TTGCAGGTGGGTTGGTGGGC+TGG - chr4_2:62948378-62948397 Msa0614040:intron 65.0%
! GCCCAGTAGTGTTGGGCGTG+AGG - chr4_2:62949541-62949560 Msa0614040:intron 65.0%
CCCCTCACGCCCAACACTAC+TGG + chr4_2:62949546-62949565 None:intergenic 65.0%
CGTTGTTGGGGGACCGTGGT+AGG + chr4_2:62951931-62951950 None:intergenic 65.0%
AGGACGTTGTTGGGGGACCG+TGG + chr4_2:62951935-62951954 None:intergenic 65.0%
GACCCTGCTGAGGGAATGCC+TGG - chr4_2:62952074-62952093 Msa0614040:intron 65.0%
GCAAGAGGACGGTAGGGCGA+AGG - chr4_2:62953148-62953167 Msa0614040:intron 65.0%
TACGAGGCCACCTGATGGGG+AGG + chr4_2:62956655-62956674 None:intergenic 65.0%
GCGACGGTAACAACCGCCGG+TGG - chr4_2:62946735-62946754 Msa0614040:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 62946471 62959991 62946471 ID=Msa0614040;Name=Msa0614040
chr4_2 mRNA 62946471 62959991 62946471 ID=Msa0614040-mRNA-1;Parent=Msa0614040;Name=Msa0614040-mRNA-1;_AED=0.10;_eAED=0.10;_QI=95|0.91|0.92|1|0.83|0.84|13|477|710
chr4_2 exon 62946471 62946821 62946471 ID=Msa0614040-mRNA-1:exon:17465;Parent=Msa0614040-mRNA-1
chr4_2 exon 62947093 62947164 62947093 ID=Msa0614040-mRNA-1:exon:17464;Parent=Msa0614040-mRNA-1
chr4_2 exon 62951061 62951207 62951061 ID=Msa0614040-mRNA-1:exon:17463;Parent=Msa0614040-mRNA-1
chr4_2 exon 62951319 62951411 62951319 ID=Msa0614040-mRNA-1:exon:17462;Parent=Msa0614040-mRNA-1
chr4_2 exon 62951580 62951654 62951580 ID=Msa0614040-mRNA-1:exon:17461;Parent=Msa0614040-mRNA-1
chr4_2 exon 62953215 62953384 62953215 ID=Msa0614040-mRNA-1:exon:17460;Parent=Msa0614040-mRNA-1
chr4_2 exon 62953517 62953640 62953517 ID=Msa0614040-mRNA-1:exon:17459;Parent=Msa0614040-mRNA-1
chr4_2 exon 62953765 62954559 62953765 ID=Msa0614040-mRNA-1:exon:17458;Parent=Msa0614040-mRNA-1
chr4_2 exon 62956597 62956678 62956597 ID=Msa0614040-mRNA-1:exon:17457;Parent=Msa0614040-mRNA-1
chr4_2 exon 62957972 62958078 62957972 ID=Msa0614040-mRNA-1:exon:17456;Parent=Msa0614040-mRNA-1
chr4_2 exon 62958684 62958749 62958684 ID=Msa0614040-mRNA-1:exon:17455;Parent=Msa0614040-mRNA-1
chr4_2 exon 62958829 62958975 62958829 ID=Msa0614040-mRNA-1:exon:17454;Parent=Msa0614040-mRNA-1
chr4_2 exon 62959516 62959991 62959516 ID=Msa0614040-mRNA-1:exon:17453;Parent=Msa0614040-mRNA-1
chr4_2 five_prime_UTR 62959897 62959991 62959897 ID=Msa0614040-mRNA-1:five_prime_utr;Parent=Msa0614040-mRNA-1
chr4_2 CDS 62959516 62959896 62959516 ID=Msa0614040-mRNA-1:cds;Parent=Msa0614040-mRNA-1
chr4_2 CDS 62958829 62958975 62958829 ID=Msa0614040-mRNA-1:cds;Parent=Msa0614040-mRNA-1
chr4_2 CDS 62958684 62958749 62958684 ID=Msa0614040-mRNA-1:cds;Parent=Msa0614040-mRNA-1
chr4_2 CDS 62957972 62958078 62957972 ID=Msa0614040-mRNA-1:cds;Parent=Msa0614040-mRNA-1
chr4_2 CDS 62956597 62956678 62956597 ID=Msa0614040-mRNA-1:cds;Parent=Msa0614040-mRNA-1
chr4_2 CDS 62953765 62954559 62953765 ID=Msa0614040-mRNA-1:cds;Parent=Msa0614040-mRNA-1
chr4_2 CDS 62953517 62953640 62953517 ID=Msa0614040-mRNA-1:cds;Parent=Msa0614040-mRNA-1
chr4_2 CDS 62953215 62953384 62953215 ID=Msa0614040-mRNA-1:cds;Parent=Msa0614040-mRNA-1
chr4_2 CDS 62951580 62951654 62951580 ID=Msa0614040-mRNA-1:cds;Parent=Msa0614040-mRNA-1
chr4_2 CDS 62951319 62951411 62951319 ID=Msa0614040-mRNA-1:cds;Parent=Msa0614040-mRNA-1
chr4_2 CDS 62951115 62951207 62951115 ID=Msa0614040-mRNA-1:cds;Parent=Msa0614040-mRNA-1
chr4_2 three_prime_UTR 62951061 62951114 62951061 ID=Msa0614040-mRNA-1:three_prime_utr;Parent=Msa0614040-mRNA-1
chr4_2 three_prime_UTR 62947093 62947164 62947093 ID=Msa0614040-mRNA-1:three_prime_utr;Parent=Msa0614040-mRNA-1
chr4_2 three_prime_UTR 62946471 62946821 62946471 ID=Msa0614040-mRNA-1:three_prime_utr;Parent=Msa0614040-mRNA-1
Gene Sequence

>Msa0614040

ATGGCTTCTTCAATTTCATCTCTCTCCACTCCACACCTCACTTTCCCAAAACAAAACCTCTCCACAACCTTCCCTCTCAAACGTCCTTCACTTCTTCACTTCCCTTCTCAACCGTTATGTCTCTGTCTCAACTCCGTCTCCGACGACAACCACAACAGTACAAACGATGGCGACGGTAACAACCGCCGGTGGGATTCGATGCTCAGCGAATTCGTAACCGGCGCTATTAAACAATTCGGTTCTTATATGATCTCGCTTAGGAGAGGCCGTGCTGCTGATAAAGAAGACGGTGATGTTCACGATGATGATTGGGATTGGAATCGCTGGCGTCAGCATTTCGATCAGGTTGATGACCAGGAACGTCTTCTCATTATCCTCAAGTCTCAGTTACGTCATGCTGTATATGTGGAGGATTATGAAGAAGCTGCTAAGCTTAAGGTGGCGATTGCAGCTGCAGCTAACAATGACAGTGTTGGGAAAGTGATAACTCTTCTCAAAGTAGGGATTTTGATGAATGAGGGTTATACTAGAGCCATAAAAGAAGAGCGGTACAATGATGCAGCTTTTTTAAGAGATAAAGCTGGTGCTGGACTTGTGGGTTGGTGGGCTGGTATTTCAAAAGATGTGAACGATCCACATGGTCTAATTATTCGCATAACTCCAGAGCATGGAAGATATGTGGCAAGGAGTTATAGTCCTAGGCAACTTGCAACATCTGCTGCTGGTGTTCCTCTATTTGAGTTTTTTCTTACAATGGATAAAAAAGGTGACTTTAAGTCGCAGGCTGTGTACCTAAAGCGAAAAGGGTCCTACCACGGTCCCCCAACAACGTCCTCTAAACCATTGGATGCTAGTGGGAGATCGAGTTCAATGGAATCTACAGAAGACAGAAGTGAGCTGTTTGTTGTGAGTACTGAAGATCCAGAAAGTGGTGATGATAGGAATGATGGCTCTGACCCTGCTGAGGGAATGCCTGGATTTCAGAATGTCTTGAAAGATATGATTCCGGGTGTGAAGGTGAAGATTTTCAAAGTGATAACTCCAGAGAAAGTGGACAAGGATCTAATGTCTAAGGTGATTGAGGAATTATTTGAGGAAGAAGAGAGTGAGGATGAAGATGAAAATGGAGAAGATGACGGCGATGAAGACGACGGCGATGAAGAAGATGACAGTGAAGATGAAGACAAGGAAAATGATACAGAAATTCTGGATCTGGAAGACATTAAGTTGGAAACTGATCAAGAGGGAGATGATGGGATTGAGATAAATGGTGATCTTGGAACTTTTGCACGTGAAGAACAGAATGAAATTGCTGTCAAAGTTGTCATTGGTGGTCTTGTGCAGAAACTTTCCAGCAATTTATCCCCTAGAGATTTGCTTCGAGTTCCTGCTAAGCTGGAGATCAAGGAGCGTCGTTCATTTTCCTTTACTGTTGAAAACGAAGTCAATCAGCTGGATGGTCCTGACAAAGGGAAATCTTCATCAGATAAATCAATTAAGTTTCAAGGTCGTCGCAGAGTTGATAATGTTATTTCTGATCTTGCAAAATTCATTGGCAAGGATAAAGTACCTGCAAAGGTGCTGAAAGAGGTAGGAGAATTGATAAGTCTCACTCTAAGCCAGGCTCAGAATCATCAACCATTATCTGGGTCAACGATTTTCAATCGCATTGAAATACCAACTTCATTTGATCCCTTAAATGGCTTATATATTGGTGCATATGGTGTTTACTCTTCTGAAGTTATTCAAATGAGACGTAGATATGGTCAATGGCAAGAGGACGGTAGGGCGAAGGAGACTTCAGATCTCGAGTTTTATGAGTATGTAGAAGCCTTGAAAATAACCGGGGATCCTTATGTACCAGCTGGCCAGGTGGCATTTCGTGCAAAAGTTGGAAAGGGGTACCAACTTCCACATAAAGGCATAATTCCTGAAGAATTTGGAGTGATTGCTCGCTATAAAGGTGAAGGAAGATTGGCAGAGCCAGGGTTTCAGAATCCTCGATGGGTTGACGGTGAACTGGTGATTCTTGATGGAAAGCACATAAAAGCAGGGCCTGTTGTTGGATTTGTGTATTGGGCTCCTGAGTATCATTTTTTGGTCTTTTTCAATCGGCTTAGGCTTCAACAGTAG
Protein sequence

>Msa0614040

MASSISSLSTPHLTFPKQNLSTTFPLKRPSLLHFPSQPLCLCLNSVSDDNHNSTNDGDGNNRRWDSMLSEFVTGAIKQFGSYMISLRRGRAADKEDGDVHDDDWDWNRWRQHFDQVDDQERLLIILKSQLRHAVYVEDYEEAAKLKVAIAAAANNDSVGKVITLLKVGILMNEGYTRAIKEERYNDAAFLRDKAGAGLVGWWAGISKDVNDPHGLIIRITPEHGRYVARSYSPRQLATSAAGVPLFEFFLTMDKKGDFKSQAVYLKRKGSYHGPPTTSSKPLDASGRSSSMESTEDRSELFVVSTEDPESGDDRNDGSDPAEGMPGFQNVLKDMIPGVKVKIFKVITPEKVDKDLMSKVIEELFEEEESEDEDENGEDDGDEDDGDEEDDSEDEDKENDTEILDLEDIKLETDQEGDDGIEINGDLGTFAREEQNEIAVKVVIGGLVQKLSSNLSPRDLLRVPAKLEIKERRSFSFTVENEVNQLDGPDKGKSSSDKSIKFQGRRRVDNVISDLAKFIGKDKVPAKVLKEVGELISLTLSQAQNHQPLSGSTIFNRIEIPTSFDPLNGLYIGAYGVYSSEVIQMRRRYGQWQEDGRAKETSDLEFYEYVEALKITGDPYVPAGQVAFRAKVGKGYQLPHKGIIPEEFGVIARYKGEGRLAEPGFQNPRWVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRLQQ*