Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29028.t1 | KEH34859.1 | 96.3 | 214 | 8 | 0 | 1 | 214 | 388 | 601 | 7.10E-109 | 403.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29028.t1 | B0S1F7 | 50.0 | 70 | 29 | 1 | 22 | 91 | 2 | 65 | 1.1e-09 | 65.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29028.t1 | I3S0W3 | 96.3 | 214 | 8 | 0 | 1 | 214 | 58 | 271 | 5.1e-109 | 403.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene29028 | 0.803808 | 2.92E-49 | -1.69E-46 |
| MS.gene049171 | MS.gene29028 | 0.855806 | 4.93E-62 | -1.69E-46 |
| MS.gene049217 | MS.gene29028 | 0.82709 | 1.90E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene29028 | 0.882335 | 1.14E-70 | -1.69E-46 |
| MS.gene049232 | MS.gene29028 | 0.858217 | 9.59E-63 | -1.69E-46 |
| MS.gene049285 | MS.gene29028 | 0.842242 | 2.91E-58 | -1.69E-46 |
| MS.gene049320 | MS.gene29028 | 0.83883 | 2.28E-57 | -1.69E-46 |
| MS.gene049356 | MS.gene29028 | 0.839398 | 1.62E-57 | -1.69E-46 |
| MS.gene049369 | MS.gene29028 | 0.846342 | 2.31E-59 | -1.69E-46 |
| MS.gene049396 | MS.gene29028 | 0.885439 | 8.13E-72 | -1.69E-46 |
| MS.gene049609 | MS.gene29028 | 0.88547 | 7.91E-72 | -1.69E-46 |
| MS.gene049633 | MS.gene29028 | 0.865288 | 6.58E-65 | -1.69E-46 |
| MS.gene049805 | MS.gene29028 | 0.863565 | 2.27E-64 | -1.69E-46 |
| MS.gene05010 | MS.gene29028 | 0.840414 | 8.82E-58 | -1.69E-46 |
| MS.gene050170 | MS.gene29028 | 0.860792 | 1.61E-63 | -1.69E-46 |
| MS.gene050216 | MS.gene29028 | 0.82071 | 5.94E-53 | -1.69E-46 |
| MS.gene050323 | MS.gene29028 | 0.876775 | 1.07E-68 | -1.69E-46 |
| MS.gene050380 | MS.gene29028 | -0.820428 | 6.90E-53 | -1.69E-46 |
| MS.gene050444 | MS.gene29028 | 0.819899 | 9.11E-53 | -1.69E-46 |
| MS.gene050496 | MS.gene29028 | 0.820507 | 6.61E-53 | -1.69E-46 |
| MS.gene050499 | MS.gene29028 | 0.817757 | 2.79E-52 | -1.69E-46 |
| MS.gene050502 | MS.gene29028 | 0.816287 | 5.98E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene29028 | 0.844161 | 8.97E-59 | -1.69E-46 |
| MS.gene050518 | MS.gene29028 | 0.804142 | 2.49E-49 | -1.69E-46 |
| MS.gene050520 | MS.gene29028 | 0.800964 | 1.13E-48 | -1.69E-46 |
| MS.gene050538 | MS.gene29028 | 0.838532 | 2.72E-57 | -1.69E-46 |
| MS.gene050553 | MS.gene29028 | 0.807947 | 3.94E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene29028 | 0.820548 | 6.47E-53 | -1.69E-46 |
| MS.gene050593 | MS.gene29028 | 0.852759 | 3.74E-61 | -1.69E-46 |
| MS.gene050612 | MS.gene29028 | 0.822453 | 2.35E-53 | -1.69E-46 |
| MS.gene050662 | MS.gene29028 | 0.823185 | 1.59E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene29028 | 0.822524 | 2.26E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene29028 | 0.832018 | 1.20E-55 | -1.69E-46 |
| MS.gene050686 | MS.gene29028 | 0.803083 | 4.13E-49 | -1.69E-46 |
| MS.gene050690 | MS.gene29028 | 0.811202 | 7.88E-51 | -1.69E-46 |
| MS.gene050699 | MS.gene29028 | 0.810081 | 1.38E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene29028 | 0.893178 | 8.01E-75 | -1.69E-46 |
| MS.gene050772 | MS.gene29028 | 0.880559 | 4.97E-70 | -1.69E-46 |
| MS.gene050809 | MS.gene29028 | -0.805069 | 1.59E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene29028 | 0.894621 | 2.08E-75 | -1.69E-46 |
| MS.gene05081 | MS.gene29028 | 0.856375 | 3.36E-62 | -1.69E-46 |
| MS.gene050868 | MS.gene29028 | 0.89195 | 2.49E-74 | -1.69E-46 |
| MS.gene050871 | MS.gene29028 | 0.8939 | 4.09E-75 | -1.69E-46 |
| MS.gene050904 | MS.gene29028 | 0.815788 | 7.73E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene29028 | 0.883136 | 5.79E-71 | -1.69E-46 |
| MS.gene050986 | MS.gene29028 | 0.823439 | 1.38E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene29028 | 0.822268 | 2.59E-53 | -1.69E-46 |
| MS.gene051113 | MS.gene29028 | -0.810639 | 1.04E-50 | -1.69E-46 |
| MS.gene051167 | MS.gene29028 | -0.835276 | 1.84E-56 | -1.69E-46 |
| MS.gene051268 | MS.gene29028 | 0.854038 | 1.61E-61 | -1.69E-46 |
| MS.gene051317 | MS.gene29028 | 0.800837 | 1.19E-48 | -1.69E-46 |
| MS.gene051360 | MS.gene29028 | 0.805162 | 1.52E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene29028 | 0.839206 | 1.82E-57 | -1.69E-46 |
| MS.gene051438 | MS.gene29028 | 0.850267 | 1.90E-60 | -1.69E-46 |
| MS.gene051509 | MS.gene29028 | 0.805089 | 1.58E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene29028 | 0.820776 | 5.74E-53 | -1.69E-46 |
| MS.gene051666 | MS.gene29028 | 0.835531 | 1.59E-56 | -1.69E-46 |
| MS.gene051692 | MS.gene29028 | 0.800711 | 1.27E-48 | -1.69E-46 |
| MS.gene051694 | MS.gene29028 | 0.812906 | 3.35E-51 | -1.69E-46 |
| MS.gene051734 | MS.gene29028 | 0.842624 | 2.31E-58 | -1.69E-46 |
| MS.gene051838 | MS.gene29028 | 0.919994 | 2.24E-87 | -1.69E-46 |
| MS.gene051858 | MS.gene29028 | 0.811458 | 6.93E-51 | -1.69E-46 |
| MS.gene051874 | MS.gene29028 | 0.869688 | 2.57E-66 | -1.69E-46 |
| MS.gene051941 | MS.gene29028 | 0.820555 | 6.45E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene29028 | 0.885699 | 6.49E-72 | -1.69E-46 |
| MS.gene052346 | MS.gene29028 | 0.824449 | 8.02E-54 | -1.69E-46 |
| MS.gene052414 | MS.gene29028 | 0.852406 | 4.71E-61 | -1.69E-46 |
| MS.gene052421 | MS.gene29028 | 0.829512 | 4.94E-55 | -1.69E-46 |
| MS.gene052482 | MS.gene29028 | 0.819363 | 1.21E-52 | -1.69E-46 |
| MS.gene052484 | MS.gene29028 | 0.804118 | 2.52E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene29028 | 0.827021 | 1.97E-54 | -1.69E-46 |
| MS.gene052501 | MS.gene29028 | 0.841277 | 5.24E-58 | -1.69E-46 |
| MS.gene052503 | MS.gene29028 | 0.873601 | 1.30E-67 | -1.69E-46 |
| MS.gene052504 | MS.gene29028 | 0.819054 | 1.42E-52 | -1.69E-46 |
| MS.gene052505 | MS.gene29028 | 0.833135 | 6.35E-56 | -1.69E-46 |
| MS.gene052506 | MS.gene29028 | 0.856175 | 3.84E-62 | -1.69E-46 |
| MS.gene052615 | MS.gene29028 | 0.851351 | 9.39E-61 | -1.69E-46 |
| MS.gene052820 | MS.gene29028 | 0.80606 | 9.88E-50 | -1.69E-46 |
| MS.gene052822 | MS.gene29028 | 0.85414 | 1.50E-61 | -1.69E-46 |
| MS.gene052823 | MS.gene29028 | 0.868474 | 6.36E-66 | -1.69E-46 |
| MS.gene052825 | MS.gene29028 | 0.870363 | 1.54E-66 | -1.69E-46 |
| MS.gene052870 | MS.gene29028 | 0.83324 | 5.98E-56 | -1.69E-46 |
| MS.gene052872 | MS.gene29028 | 0.836595 | 8.54E-57 | -1.69E-46 |
| MS.gene052966 | MS.gene29028 | 0.889241 | 2.89E-73 | -1.69E-46 |
| MS.gene052982 | MS.gene29028 | 0.823846 | 1.11E-53 | -1.69E-46 |
| MS.gene052986 | MS.gene29028 | 0.822441 | 2.36E-53 | -1.69E-46 |
| MS.gene052987 | MS.gene29028 | 0.824666 | 7.13E-54 | -1.69E-46 |
| MS.gene053018 | MS.gene29028 | 0.807809 | 4.22E-50 | -1.69E-46 |
| MS.gene053103 | MS.gene29028 | 0.809697 | 1.66E-50 | -1.69E-46 |
| MS.gene053104 | MS.gene29028 | 0.828889 | 7.00E-55 | -1.69E-46 |
| MS.gene053117 | MS.gene29028 | 0.831446 | 1.66E-55 | -1.69E-46 |
| MS.gene053203 | MS.gene29028 | 0.871727 | 5.48E-67 | -1.69E-46 |
| MS.gene053207 | MS.gene29028 | 0.869744 | 2.46E-66 | -1.69E-46 |
| MS.gene053213 | MS.gene29028 | 0.846923 | 1.60E-59 | -1.69E-46 |
| MS.gene053286 | MS.gene29028 | 0.843905 | 1.05E-58 | -1.69E-46 |
| MS.gene053318 | MS.gene29028 | 0.814287 | 1.66E-51 | -1.69E-46 |
| MS.gene053421 | MS.gene29028 | -0.806183 | 9.31E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene29028 | 0.843404 | 1.43E-58 | -1.69E-46 |
| MS.gene053449 | MS.gene29028 | 0.85446 | 1.21E-61 | -1.69E-46 |
| MS.gene053479 | MS.gene29028 | 0.857094 | 2.06E-62 | -1.69E-46 |
| MS.gene053480 | MS.gene29028 | 0.848818 | 4.81E-60 | -1.69E-46 |
| MS.gene053505 | MS.gene29028 | 0.827332 | 1.66E-54 | -1.69E-46 |
| MS.gene053562 | MS.gene29028 | -0.811481 | 6.85E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene29028 | 0.892522 | 1.47E-74 | -1.69E-46 |
| MS.gene053626 | MS.gene29028 | 0.889633 | 2.03E-73 | -1.69E-46 |
| MS.gene053632 | MS.gene29028 | 0.861783 | 8.05E-64 | -1.69E-46 |
| MS.gene053633 | MS.gene29028 | 0.833823 | 4.27E-56 | -1.69E-46 |
| MS.gene053824 | MS.gene29028 | 0.887819 | 1.02E-72 | -1.69E-46 |
| MS.gene053912 | MS.gene29028 | 0.870773 | 1.13E-66 | -1.69E-46 |
| MS.gene053916 | MS.gene29028 | 0.865586 | 5.31E-65 | -1.69E-46 |
| MS.gene054003 | MS.gene29028 | 0.888718 | 4.60E-73 | -1.69E-46 |
| MS.gene054408 | MS.gene29028 | 0.843471 | 1.37E-58 | -1.69E-46 |
| MS.gene054595 | MS.gene29028 | 0.881491 | 2.30E-70 | -1.69E-46 |
| MS.gene054600 | MS.gene29028 | 0.858826 | 6.31E-63 | -1.69E-46 |
| MS.gene054642 | MS.gene29028 | 0.838425 | 2.90E-57 | -1.69E-46 |
| MS.gene054706 | MS.gene29028 | -0.852264 | 5.17E-61 | -1.69E-46 |
| MS.gene054707 | MS.gene29028 | -0.813736 | 2.20E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene29028 | 0.828962 | 6.72E-55 | -1.69E-46 |
| MS.gene054742 | MS.gene29028 | -0.800455 | 1.43E-48 | -1.69E-46 |
| MS.gene054927 | MS.gene29028 | 0.865114 | 7.47E-65 | -1.69E-46 |
| MS.gene05494 | MS.gene29028 | 0.87792 | 4.27E-69 | -1.69E-46 |
| MS.gene054954 | MS.gene29028 | 0.828147 | 1.06E-54 | -1.69E-46 |
| MS.gene05505 | MS.gene29028 | 0.855186 | 7.47E-62 | -1.69E-46 |
| MS.gene055206 | MS.gene29028 | 0.845633 | 3.60E-59 | -1.69E-46 |
| MS.gene055224 | MS.gene29028 | 0.872504 | 3.02E-67 | -1.69E-46 |
| MS.gene055289 | MS.gene29028 | 0.840511 | 8.32E-58 | -1.69E-46 |
| MS.gene055362 | MS.gene29028 | 0.839816 | 1.26E-57 | -1.69E-46 |
| MS.gene055486 | MS.gene29028 | 0.837875 | 4.01E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene29028 | 0.858398 | 8.47E-63 | -1.69E-46 |
| MS.gene055577 | MS.gene29028 | 0.883628 | 3.82E-71 | -1.69E-46 |
| MS.gene055722 | MS.gene29028 | 0.868364 | 6.90E-66 | -1.69E-46 |
| MS.gene055741 | MS.gene29028 | 0.833936 | 4.01E-56 | -1.69E-46 |
| MS.gene055744 | MS.gene29028 | 0.82789 | 1.22E-54 | -1.69E-46 |
| MS.gene055748 | MS.gene29028 | 0.828806 | 7.33E-55 | -1.69E-46 |
| MS.gene055750 | MS.gene29028 | 0.835099 | 2.04E-56 | -1.69E-46 |
| MS.gene055751 | MS.gene29028 | 0.818982 | 1.48E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene29028 | 0.863937 | 1.74E-64 | -1.69E-46 |
| MS.gene055909 | MS.gene29028 | 0.839427 | 1.60E-57 | -1.69E-46 |
| MS.gene055911 | MS.gene29028 | 0.833891 | 4.11E-56 | -1.69E-46 |
| MS.gene05592 | MS.gene29028 | 0.821703 | 3.51E-53 | -1.69E-46 |
| MS.gene055941 | MS.gene29028 | 0.882894 | 7.10E-71 | -1.69E-46 |
| MS.gene05601 | MS.gene29028 | 0.837539 | 4.90E-57 | -1.69E-46 |
| MS.gene056040 | MS.gene29028 | 0.826044 | 3.37E-54 | -1.69E-46 |
| MS.gene056046 | MS.gene29028 | 0.84587 | 3.10E-59 | -1.69E-46 |
| MS.gene056166 | MS.gene29028 | 0.893973 | 3.82E-75 | -1.69E-46 |
| MS.gene056374 | MS.gene29028 | 0.803181 | 3.94E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene29028 | 0.871888 | 4.85E-67 | -1.69E-46 |
| MS.gene056422 | MS.gene29028 | 0.851723 | 7.37E-61 | -1.69E-46 |
| MS.gene056446 | MS.gene29028 | 0.820481 | 6.70E-53 | -1.69E-46 |
| MS.gene056448 | MS.gene29028 | 0.881654 | 2.01E-70 | -1.69E-46 |
| MS.gene056487 | MS.gene29028 | 0.840118 | 1.05E-57 | -1.69E-46 |
| MS.gene056504 | MS.gene29028 | 0.861456 | 1.01E-63 | -1.69E-46 |
| MS.gene056510 | MS.gene29028 | 0.859839 | 3.13E-63 | -1.69E-46 |
| MS.gene056511 | MS.gene29028 | 0.858982 | 5.67E-63 | -1.69E-46 |
| MS.gene056618 | MS.gene29028 | -0.801094 | 1.06E-48 | -1.69E-46 |
| MS.gene05664 | MS.gene29028 | 0.840058 | 1.09E-57 | -1.69E-46 |
| MS.gene056657 | MS.gene29028 | 0.836649 | 8.27E-57 | -1.69E-46 |
| MS.gene05666 | MS.gene29028 | 0.850514 | 1.62E-60 | -1.69E-46 |
| MS.gene056692 | MS.gene29028 | 0.814452 | 1.53E-51 | -1.69E-46 |
| MS.gene056898 | MS.gene29028 | 0.803544 | 3.31E-49 | -1.69E-46 |
| MS.gene057048 | MS.gene29028 | 0.805739 | 1.15E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene29028 | 0.876953 | 9.26E-69 | -1.69E-46 |
| MS.gene057086 | MS.gene29028 | 0.884997 | 1.19E-71 | -1.69E-46 |
| MS.gene057124 | MS.gene29028 | 0.811292 | 7.53E-51 | -1.69E-46 |
| MS.gene057173 | MS.gene29028 | -0.800628 | 1.32E-48 | -1.69E-46 |
| MS.gene057289 | MS.gene29028 | 0.837375 | 5.39E-57 | -1.69E-46 |
| MS.gene057331 | MS.gene29028 | 0.83205 | 1.18E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene29028 | 0.847396 | 1.19E-59 | -1.69E-46 |
| MS.gene057658 | MS.gene29028 | 0.843232 | 1.59E-58 | -1.69E-46 |
| MS.gene057734 | MS.gene29028 | 0.902584 | 8.35E-79 | -1.69E-46 |
| MS.gene057805 | MS.gene29028 | 0.800916 | 1.15E-48 | -1.69E-46 |
| MS.gene057831 | MS.gene29028 | 0.827032 | 1.96E-54 | -1.69E-46 |
| MS.gene057856 | MS.gene29028 | 0.871628 | 5.91E-67 | -1.69E-46 |
| MS.gene057857 | MS.gene29028 | 0.850773 | 1.37E-60 | -1.69E-46 |
| MS.gene05787 | MS.gene29028 | 0.869632 | 2.68E-66 | -1.69E-46 |
| MS.gene057926 | MS.gene29028 | 0.843937 | 1.03E-58 | -1.69E-46 |
| MS.gene058007 | MS.gene29028 | 0.804928 | 1.71E-49 | -1.69E-46 |
| MS.gene058075 | MS.gene29028 | 0.802448 | 5.58E-49 | -1.69E-46 |
| MS.gene058090 | MS.gene29028 | 0.806245 | 9.03E-50 | -1.69E-46 |
| MS.gene058120 | MS.gene29028 | 0.86056 | 1.90E-63 | -1.69E-46 |
| MS.gene058130 | MS.gene29028 | 0.843641 | 1.24E-58 | -1.69E-46 |
| MS.gene058157 | MS.gene29028 | 0.877001 | 8.91E-69 | -1.69E-46 |
| MS.gene058338 | MS.gene29028 | 0.843913 | 1.05E-58 | -1.69E-46 |
| MS.gene058376 | MS.gene29028 | 0.824517 | 7.73E-54 | -1.69E-46 |
| MS.gene05837 | MS.gene29028 | 0.873854 | 1.06E-67 | -1.69E-46 |
| MS.gene058419 | MS.gene29028 | 0.839889 | 1.21E-57 | -1.69E-46 |
| MS.gene058459 | MS.gene29028 | 0.810701 | 1.01E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene29028 | 0.836034 | 1.19E-56 | -1.69E-46 |
| MS.gene058700 | MS.gene29028 | 0.823059 | 1.70E-53 | -1.69E-46 |
| MS.gene058773 | MS.gene29028 | 0.860613 | 1.83E-63 | -1.69E-46 |
| MS.gene058838 | MS.gene29028 | 0.873892 | 1.03E-67 | -1.69E-46 |
| MS.gene058948 | MS.gene29028 | 0.849975 | 2.29E-60 | -1.69E-46 |
| MS.gene059022 | MS.gene29028 | 0.83172 | 1.42E-55 | -1.69E-46 |
| MS.gene059023 | MS.gene29028 | 0.862426 | 5.11E-64 | -1.69E-46 |
| MS.gene05913 | MS.gene29028 | 0.858484 | 7.98E-63 | -1.69E-46 |
| MS.gene059305 | MS.gene29028 | 0.839281 | 1.74E-57 | -1.69E-46 |
| MS.gene05934 | MS.gene29028 | 0.826799 | 2.22E-54 | -1.69E-46 |
| MS.gene059367 | MS.gene29028 | 0.877759 | 4.86E-69 | -1.69E-46 |
| MS.gene059368 | MS.gene29028 | 0.849678 | 2.77E-60 | -1.69E-46 |
| MS.gene059455 | MS.gene29028 | 0.846222 | 2.49E-59 | -1.69E-46 |
| MS.gene059667 | MS.gene29028 | 0.889233 | 2.91E-73 | -1.69E-46 |
| MS.gene059674 | MS.gene29028 | 0.824526 | 7.70E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene29028 | 0.821483 | 3.94E-53 | -1.69E-46 |
| MS.gene059680 | MS.gene29028 | 0.812659 | 3.79E-51 | -1.69E-46 |
| MS.gene059699 | MS.gene29028 | -0.808484 | 3.03E-50 | -1.69E-46 |
| MS.gene059703 | MS.gene29028 | -0.808998 | 2.35E-50 | -1.69E-46 |
| MS.gene059711 | MS.gene29028 | 0.846511 | 2.07E-59 | -1.69E-46 |
| MS.gene059718 | MS.gene29028 | 0.878919 | 1.90E-69 | -1.69E-46 |
| MS.gene059801 | MS.gene29028 | 0.842711 | 2.19E-58 | -1.69E-46 |
| MS.gene059865 | MS.gene29028 | 0.85921 | 4.84E-63 | -1.69E-46 |
| MS.gene059902 | MS.gene29028 | 0.803065 | 4.16E-49 | -1.69E-46 |
| MS.gene05995 | MS.gene29028 | 0.828026 | 1.13E-54 | -1.69E-46 |
| MS.gene05996 | MS.gene29028 | 0.811226 | 7.78E-51 | -1.69E-46 |
| MS.gene06000 | MS.gene29028 | 0.852247 | 5.23E-61 | -1.69E-46 |
| MS.gene06027 | MS.gene29028 | 0.801348 | 9.39E-49 | -1.69E-46 |
| MS.gene060295 | MS.gene29028 | 0.842732 | 2.16E-58 | -1.69E-46 |
| MS.gene060372 | MS.gene29028 | 0.842291 | 2.83E-58 | -1.69E-46 |
| MS.gene060403 | MS.gene29028 | 0.803637 | 3.17E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene29028 | 0.864594 | 1.09E-64 | -1.69E-46 |
| MS.gene060762 | MS.gene29028 | 0.865301 | 6.52E-65 | -1.69E-46 |
| MS.gene060778 | MS.gene29028 | 0.865135 | 7.35E-65 | -1.69E-46 |
| MS.gene06077 | MS.gene29028 | 0.835067 | 2.08E-56 | -1.69E-46 |
| MS.gene060804 | MS.gene29028 | 0.825336 | 4.96E-54 | -1.69E-46 |
| MS.gene060818 | MS.gene29028 | 0.813543 | 2.43E-51 | -1.69E-46 |
| MS.gene060835 | MS.gene29028 | 0.869583 | 2.78E-66 | -1.69E-46 |
| MS.gene060837 | MS.gene29028 | 0.890088 | 1.35E-73 | -1.69E-46 |
| MS.gene06092 | MS.gene29028 | 0.858498 | 7.91E-63 | -1.69E-46 |
| MS.gene06097 | MS.gene29028 | 0.868254 | 7.48E-66 | -1.69E-46 |
| MS.gene060982 | MS.gene29028 | 0.862901 | 3.65E-64 | -1.69E-46 |
| MS.gene061041 | MS.gene29028 | 0.820675 | 6.05E-53 | -1.69E-46 |
| MS.gene061134 | MS.gene29028 | 0.806162 | 9.40E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene29028 | 0.813124 | 3.00E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29028.t1 | MTR_3g073560 | 96.262 | 214 | 8 | 0 | 1 | 214 | 388 | 601 | 1.50e-147 | 423 |
| MS.gene29028.t1 | MTR_2g097690 | 31.746 | 126 | 58 | 3 | 1 | 105 | 33 | 151 | 5.09e-13 | 65.5 |
| MS.gene29028.t1 | MTR_2g097690 | 31.746 | 126 | 58 | 3 | 1 | 105 | 33 | 151 | 2.65e-12 | 64.7 |
| MS.gene29028.t1 | MTR_8g075780 | 36.264 | 91 | 51 | 2 | 4 | 91 | 25 | 111 | 3.59e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29028.t1 | AT1G77930 | 75.362 | 207 | 51 | 0 | 2 | 208 | 55 | 261 | 2.13e-115 | 330 |
| MS.gene29028.t1 | AT1G77930 | 75.362 | 207 | 51 | 0 | 2 | 208 | 55 | 261 | 2.13e-115 | 330 |
| MS.gene29028.t1 | AT1G77930 | 76.027 | 146 | 35 | 0 | 2 | 147 | 55 | 200 | 1.20e-82 | 244 |
Find 41 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCAGCAGTACCCTTAAA+AGG | 0.282851 | 3.4:-72144637 | MS.gene29028:CDS |
| AAAGATTGCTTATAGACGTT+TGG | 0.369471 | 3.4:-72146501 | MS.gene29028:CDS |
| CTGTGGCGAAAGCAACGAAT+TGG | 0.403026 | 3.4:-72146952 | MS.gene29028:CDS |
| CTGCCGTTTCACCTTCCTCA+AGG | 0.406425 | 3.4:+72145904 | None:intergenic |
| GTGATATGGCAATTTATGCT+TGG | 0.410426 | 3.4:-72145068 | MS.gene29028:CDS |
| TGATATGGCAATTTATGCTT+GGG | 0.419580 | 3.4:-72145067 | MS.gene29028:CDS |
| CCACAGTTCTCTTCTGATTG+AGG | 0.429219 | 3.4:+72146969 | None:intergenic |
| TTTACTCTTCAAGTCTATGA+TGG | 0.433498 | 3.4:-72145936 | MS.gene29028:intron |
| AGAATCTTCCTATATTCATC+TGG | 0.433520 | 3.4:+72144689 | None:intergenic |
| AAATTACCAAGAGTTTCATA+TGG | 0.440349 | 3.4:+72146914 | None:intergenic |
| AATTACCAAGAGTTTCATAT+GGG | 0.462947 | 3.4:+72146915 | None:intergenic |
| AGGTTGATCCAGATGAATAT+AGG | 0.465707 | 3.4:-72144697 | MS.gene29028:CDS |
| AGATGAATATAGGAAGATTC+TGG | 0.467333 | 3.4:-72144687 | MS.gene29028:CDS |
| TGCCGTTTCACCTTCCTCAA+GGG | 0.480126 | 3.4:+72145905 | None:intergenic |
| ATTCGATCAGACCCATGCTT+CGG | 0.489870 | 3.4:-72146997 | None:intergenic |
| TGTGGCGAAAGCAACGAATT+GGG | 0.490446 | 3.4:-72146951 | MS.gene29028:CDS |
| AAAATATGACACGGCTAACC+AGG | 0.515733 | 3.4:-72145820 | MS.gene29028:CDS |
| TCAGGCATCTCAAGCATGGA+TGG | 0.521128 | 3.4:-72145130 | MS.gene29028:intron |
| AACCCTTGAGGAAGGTGAAA+CGG | 0.521649 | 3.4:-72145907 | MS.gene29028:CDS |
| AAAACCCCATATGAAACTCT+TGG | 0.524253 | 3.4:-72146920 | MS.gene29028:intron |
| GATTCTGGCAAGAGAAAAGA+AGG | 0.532183 | 3.4:-72144672 | MS.gene29028:CDS |
| AAGGTGAAACGGCAGAAGCT+AGG | 0.542000 | 3.4:-72145896 | MS.gene29028:CDS |
| TCGTCAACTTTCTCGTTCAA+AGG | 0.543406 | 3.4:-72145010 | MS.gene29028:intron |
| CTTCAAGTCTATGATGGAAG+AGG | 0.550880 | 3.4:-72145930 | MS.gene29028:intron |
| TTACCTTCATAGGGTTGACC+TGG | 0.555641 | 3.4:+72145802 | None:intergenic |
| TAACCAGGTCAACCCTATGA+AGG | 0.562390 | 3.4:-72145805 | MS.gene29028:intron |
| ATTGAGGCGAAACCGAAGCA+TGG | 0.565622 | 3.4:+72146985 | None:intergenic |
| TCATTCAGGCATCTCAAGCA+TGG | 0.574313 | 3.4:-72145134 | MS.gene29028:intron |
| GGACATCTCTTAGCCGCAGA+AGG | 0.579963 | 3.4:-72144545 | MS.gene29028:CDS |
| GAAGAAATGAAGAAGACTAT+CGG | 0.580783 | 3.4:-72144566 | MS.gene29028:CDS |
| CATCTCAAGCATGGATGGAG+TGG | 0.584888 | 3.4:-72145125 | MS.gene29028:CDS |
| GGAAGAGGAACCCTTGAGGA+AGG | 0.586551 | 3.4:-72145915 | MS.gene29028:CDS |
| TTGAGGCGAAACCGAAGCAT+GGG | 0.597119 | 3.4:+72146986 | None:intergenic |
| TGAGCTTGATGATAGTGAAG+AGG | 0.600957 | 3.4:-72144519 | MS.gene29028:CDS |
| TGCTTATAGATGCAGAGAGG+CGG | 0.606451 | 3.4:-72145845 | MS.gene29028:CDS |
| ATCAAGCTCAAGACCTTCTG+CGG | 0.612130 | 3.4:+72144532 | None:intergenic |
| ATTACCAAGAGTTTCATATG+GGG | 0.647825 | 3.4:+72146916 | None:intergenic |
| TGATGGAAGAGGAACCCTTG+AGG | 0.650992 | 3.4:-72145919 | MS.gene29028:CDS |
| GGTGAAACAACAGAACTGGA+AGG | 0.677606 | 3.4:-72146545 | MS.gene29028:intron |
| CCTCAATCAGAAGAGAACTG+TGG | 0.739950 | 3.4:-72146969 | MS.gene29028:CDS |
| AATTGCTTATAGATGCAGAG+AGG | 0.753654 | 3.4:-72145848 | MS.gene29028:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAACTAATATCTAATATA+TGG | - | chr3.4:72145964-72145983 | MS.gene29028:intron | 10.0% |
| !! | AAAAAAATTTAGATAACTCT+CGG | - | chr3.4:72145388-72145407 | MS.gene29028:intron | 15.0% |
| !! | AATAAAAATATTACCTTCAT+AGG | + | chr3.4:72145705-72145724 | None:intergenic | 15.0% |
| !! | ATAAAAATATTACCTTCATA+GGG | + | chr3.4:72145704-72145723 | None:intergenic | 15.0% |
| !! | TAGATTAACTATTTAAATGA+TGG | - | chr3.4:72144765-72144784 | MS.gene29028:intron | 15.0% |
| !! | TTAATCTAATAGCTAAAAAT+TGG | - | chr3.4:72144644-72144663 | MS.gene29028:CDS | 15.0% |
| !!! | AGGTAATATTTTTATTTTTG+TGG | - | chr3.4:72145709-72145728 | MS.gene29028:intron | 15.0% |
| !! | ACTATTTAAATGATGGTTAA+TGG | - | chr3.4:72144772-72144791 | MS.gene29028:intron | 20.0% |
| !! | TAATTAAAAAAACACTAGCA+CGG | + | chr3.4:72145496-72145515 | None:intergenic | 20.0% |
| !!! | TTAAGATTTATGAGTTTTCA+AGG | + | chr3.4:72146252-72146271 | None:intergenic | 20.0% |
| !!! | TTGTTCCTTTTTGAAAAAAT+TGG | - | chr3.4:72144685-72144704 | MS.gene29028:CDS | 20.0% |
| !!! | TTTGACCAATTTTTTCAAAA+AGG | + | chr3.4:72144693-72144712 | None:intergenic | 20.0% |
| ! | AAATTACCAAGAGTTTCATA+TGG | + | chr3.4:72144583-72144602 | None:intergenic | 25.0% |
| ! | AACATATCACAAACAACTAA+TGG | + | chr3.4:72145466-72145485 | None:intergenic | 25.0% |
| ! | AAGAAGAAGTTAATGTGTTT+GGG | - | chr3.4:72144804-72144823 | MS.gene29028:intron | 25.0% |
| ! | AATTACCAAGAGTTTCATAT+GGG | + | chr3.4:72144582-72144601 | None:intergenic | 25.0% |
| ! | TCAAATTCACATATAGAATG+AGG | + | chr3.4:72145110-72145129 | None:intergenic | 25.0% |
| ! | TTAGTTGTTACTGTTAAGTA+TGG | - | chr3.4:72144831-72144850 | MS.gene29028:intron | 25.0% |
| !! | ATTGGAAAGAACAATTTTCA+CGG | - | chr3.4:72145326-72145345 | MS.gene29028:intron | 25.0% |
| !! | CAATAGAGATGAAAATTTTG+TGG | - | chr3.4:72144885-72144904 | MS.gene29028:intron | 25.0% |
| !! | TGACCATAACTTTATTTGTA+GGG | + | chr3.4:72146579-72146598 | None:intergenic | 25.0% |
| !!! | CATTTTTTAATCCTGTAGAA+AGG | - | chr3.4:72146044-72146063 | MS.gene29028:intron | 25.0% |
| !!! | GCTTTTAGCTTTTAAACAAA+GGG | + | chr3.4:72146092-72146111 | None:intergenic | 25.0% |
| !!! | TGCTTTTAGCTTTTAAACAA+AGG | + | chr3.4:72146093-72146112 | None:intergenic | 25.0% |
| !!! | TGTTCCTTTTTGGAAAAATT+GGG | - | chr3.4:72144616-72144635 | MS.gene29028:CDS | 25.0% |
| !!! | TTGTTCCTTTTTGGAAAAAT+TGG | - | chr3.4:72144615-72144634 | MS.gene29028:CDS | 25.0% |
| !!! | TTGTTTTTCACCAAAGAATA+GGG | - | chr3.4:72146678-72146697 | MS.gene29028:intron | 25.0% |
| AAAGATTGCTTATAGACGTT+TGG | - | chr3.4:72144993-72145012 | MS.gene29028:intron | 30.0% | |
| AAGTCAGGAACTTGATATAT+GGG | - | chr3.4:72145817-72145836 | MS.gene29028:CDS | 30.0% | |
| ACTAAATGATTGTATCACCT+TGG | - | chr3.4:72146547-72146566 | MS.gene29028:intron | 30.0% | |
| ACTTCCAATATTGAGTGATT+CGG | - | chr3.4:72146612-72146631 | MS.gene29028:intron | 30.0% | |
| AGAATCTTCCTATATTCATC+TGG | + | chr3.4:72146808-72146827 | None:intergenic | 30.0% | |
| AGATGAATATAGGAAGATTC+TGG | - | chr3.4:72146807-72146826 | MS.gene29028:intron | 30.0% | |
| ATATGTTGTCAGTTAACTGT+AGG | - | chr3.4:72146524-72146543 | MS.gene29028:CDS | 30.0% | |
| ATTACCAAGAGTTTCATATG+GGG | + | chr3.4:72144581-72144600 | None:intergenic | 30.0% | |
| CAAAAATTTACATCCATCAC+TGG | + | chr3.4:72146286-72146305 | None:intergenic | 30.0% | |
| GAAGAAATGAAGAAGACTAT+CGG | - | chr3.4:72146928-72146947 | MS.gene29028:CDS | 30.0% | |
| GAAGAAGAAGTTAATGTGTT+TGG | - | chr3.4:72144803-72144822 | MS.gene29028:intron | 30.0% | |
| GAGAGATATAATGCGAAAAA+AGG | - | chr3.4:72146900-72146919 | MS.gene29028:intron | 30.0% | |
| GTCATTTATTGAAGTTCATC+AGG | + | chr3.4:72146124-72146143 | None:intergenic | 30.0% | |
| GTGGTTATCAATAGTTAACT+AGG | - | chr3.4:72145728-72145747 | MS.gene29028:intron | 30.0% | |
| GTTTGTTCTTCAATTGTGTA+TGG | - | chr3.4:72144928-72144947 | MS.gene29028:intron | 30.0% | |
| TCTCCCTACAAATAAAGTTA+TGG | - | chr3.4:72146573-72146592 | MS.gene29028:intron | 30.0% | |
| TGATATGGCAATTTATGCTT+GGG | - | chr3.4:72146427-72146446 | MS.gene29028:intron | 30.0% | |
| TTTACTCTTCAAGTCTATGA+TGG | - | chr3.4:72145558-72145577 | MS.gene29028:intron | 30.0% | |
| ! | AACGAAAAGCTTTTAATCAG+CGG | - | chr3.4:72146402-72146421 | MS.gene29028:intron | 30.0% |
| ! | ATTTTTACATTGCACAAGTC+AGG | - | chr3.4:72145802-72145821 | MS.gene29028:intron | 30.0% |
| ! | CTGACCATAACTTTATTTGT+AGG | + | chr3.4:72146580-72146599 | None:intergenic | 30.0% |
| ! | TATAAGTGTGTGCCTTTTAA+GGG | + | chr3.4:72146872-72146891 | None:intergenic | 30.0% |
| !! | CTTGAAAGTATTTCCATTTC+AGG | + | chr3.4:72146224-72146243 | None:intergenic | 30.0% |
| !! | GGAAGTATTTATGAAATCTC+AGG | - | chr3.4:72146777-72146796 | MS.gene29028:intron | 30.0% |
| !! | GTTCCTTTTTGGAAAAATTG+GGG | - | chr3.4:72144617-72144636 | MS.gene29028:CDS | 30.0% |
| !! | TTTCTCGTTCAAAGGTATTA+GGG | - | chr3.4:72146492-72146511 | MS.gene29028:CDS | 30.0% |
| !!! | CTTTCAAGTTTGTTCCTTTT+TGG | - | chr3.4:72144606-72144625 | MS.gene29028:CDS | 30.0% |
| !!! | CTTTTTTTAATCGTTTACGC+AGG | - | chr3.4:72145753-72145772 | MS.gene29028:intron | 30.0% |
| !!! | GTTGTTTTTCACCAAAGAAT+AGG | - | chr3.4:72146677-72146696 | MS.gene29028:intron | 30.0% |
| AAAACCCCATATGAAACTCT+TGG | - | chr3.4:72144574-72144593 | MS.gene29028:CDS | 35.0% | |
| AATTGCTTATAGATGCAGAG+AGG | - | chr3.4:72145646-72145665 | MS.gene29028:intron | 35.0% | |
| ACTATCCACTCTTATATCTG+TGG | - | chr3.4:72146187-72146206 | MS.gene29028:intron | 35.0% | |
| ATAGAATGAGGTCATCACAA+CGG | + | chr3.4:72145098-72145117 | None:intergenic | 35.0% | |
| ATTTCAGCAGTACCCTTAAA+AGG | - | chr3.4:72146857-72146876 | MS.gene29028:intron | 35.0% | |
| CAAGTCAGGAACTTGATATA+TGG | - | chr3.4:72145816-72145835 | MS.gene29028:CDS | 35.0% | |
| CAATCAGACACTAAGTTGTA+TGG | + | chr3.4:72145310-72145329 | None:intergenic | 35.0% | |
| CATACAACTTAGTGTCTGAT+TGG | - | chr3.4:72145308-72145327 | MS.gene29028:intron | 35.0% | |
| CATATCTCTTTCCTTTCTAC+AGG | + | chr3.4:72146058-72146077 | None:intergenic | 35.0% | |
| GACTTGAAGAGTAAAGTAGA+AGG | + | chr3.4:72145553-72145572 | None:intergenic | 35.0% | |
| GTGATATGGCAATTTATGCT+TGG | - | chr3.4:72146426-72146445 | MS.gene29028:intron | 35.0% | |
| TAAGTATGGTTGTGTGATGT+TGG | - | chr3.4:72144845-72144864 | MS.gene29028:intron | 35.0% | |
| TAAGTTGTATGGCTGATAGT+TGG | + | chr3.4:72145299-72145318 | None:intergenic | 35.0% | |
| TATTTGTAGGGAGAAAACCA+AGG | + | chr3.4:72146567-72146586 | None:intergenic | 35.0% | |
| TCTTCCGAATCACTCAATAT+TGG | + | chr3.4:72146619-72146638 | None:intergenic | 35.0% | |
| TGATGTTTATCTGTGAAGCT+AGG | + | chr3.4:72146651-72146670 | None:intergenic | 35.0% | |
| TTGTAGAACGAACATGCTTA+TGG | + | chr3.4:72145249-72145268 | None:intergenic | 35.0% | |
| ! | AAGTTGCAAAGACTTGTTTC+AGG | + | chr3.4:72145891-72145910 | None:intergenic | 35.0% |
| ! | ACGAAAAGCTTTTAATCAGC+GGG | - | chr3.4:72146403-72146422 | MS.gene29028:intron | 35.0% |
| ! | AGGTTGATCCAGATGAATAT+AGG | - | chr3.4:72146797-72146816 | MS.gene29028:intron | 35.0% |
| ! | AGTTGCAAAGACTTGTTTCA+GGG | + | chr3.4:72145890-72145909 | None:intergenic | 35.0% |
| ! | ATAATTCAAAGCGTCTTCTG+TGG | + | chr3.4:72146165-72146184 | None:intergenic | 35.0% |
| ! | GCGAAATTTTATCATCCAGA+TGG | - | chr3.4:72145015-72145034 | MS.gene29028:CDS | 35.0% |
| ! | GTATAAGTGTGTGCCTTTTA+AGG | + | chr3.4:72146873-72146892 | None:intergenic | 35.0% |
| ! | TCTCCCCAATTTTTCCAAAA+AGG | + | chr3.4:72144623-72144642 | None:intergenic | 35.0% |
| ! | TTTTCCAACACCCTATTCTT+TGG | + | chr3.4:72146691-72146710 | None:intergenic | 35.0% |
| !! | AAATAGCATATGGTTCTGAG+AGG | + | chr3.4:72146737-72146756 | None:intergenic | 35.0% |
| !! | CTTTCTCGTTCAAAGGTATT+AGG | - | chr3.4:72146491-72146510 | MS.gene29028:CDS | 35.0% |
| !!! | GTGATGTTGGTGTTTTTTGT+AGG | - | chr3.4:72144858-72144877 | MS.gene29028:intron | 35.0% |
| AAAATATGACACGGCTAACC+AGG | - | chr3.4:72145674-72145693 | MS.gene29028:intron | 40.0% | |
| AAAATCGATACGACCAGTGA+TGG | - | chr3.4:72146270-72146289 | MS.gene29028:intron | 40.0% | |
| AGATTAAGACGCATACCATC+TGG | + | chr3.4:72145033-72145052 | None:intergenic | 40.0% | |
| ATACTTCCCAGTCATTTGCA+AGG | + | chr3.4:72146765-72146784 | None:intergenic | 40.0% | |
| CAAGGGGGAAAAATAGCATA+TGG | + | chr3.4:72146747-72146766 | None:intergenic | 40.0% | |
| GAGGCGGAAAAAATATGACA+CGG | - | chr3.4:72145665-72145684 | MS.gene29028:intron | 40.0% | |
| GATTCTGGCAAGAGAAAAGA+AGG | - | chr3.4:72146822-72146841 | MS.gene29028:intron | 40.0% | |
| GTATGGTGAAACAACAGAAC+TGG | - | chr3.4:72144945-72144964 | MS.gene29028:intron | 40.0% | |
| TACTTCCCAGTCATTTGCAA+GGG | + | chr3.4:72146764-72146783 | None:intergenic | 40.0% | |
| TCGTCAACTTTCTCGTTCAA+AGG | - | chr3.4:72146484-72146503 | MS.gene29028:CDS | 40.0% | |
| TTAGATAACTCTCGGAGCTT+CGG | - | chr3.4:72145396-72145415 | MS.gene29028:intron | 40.0% | |
| TTCACCAAAGAATAGGGTGT+TGG | - | chr3.4:72146684-72146703 | MS.gene29028:intron | 40.0% | |
| ! | ATTGATGTGCTGTGTCATTC+AGG | - | chr3.4:72146346-72146365 | MS.gene29028:intron | 40.0% |
| ! | CGAAAAGCTTTTAATCAGCG+GGG | - | chr3.4:72146404-72146423 | MS.gene29028:intron | 40.0% |
| ! | CTTCAAGTCTATGATGGAAG+AGG | - | chr3.4:72145564-72145583 | MS.gene29028:intron | 40.0% |
| ! | GGAAAGAACAATTTTCACGG+TGG | - | chr3.4:72145329-72145348 | MS.gene29028:intron | 40.0% |
| ! | TGAGCTTGATGATAGTGAAG+AGG | - | chr3.4:72146975-72146994 | MS.gene29028:CDS | 40.0% |
| ! | TTTTAATCAGCGGGGTGATA+TGG | - | chr3.4:72146412-72146431 | MS.gene29028:intron | 40.0% |
| AACCCTTGAGGAAGGTGAAA+CGG | - | chr3.4:72145587-72145606 | MS.gene29028:intron | 45.0% | |
| ACTTCCCAGTCATTTGCAAG+GGG | + | chr3.4:72146763-72146782 | None:intergenic | 45.0% | |
| ATCAAGCTCAAGACCTTCTG+CGG | + | chr3.4:72146965-72146984 | None:intergenic | 45.0% | |
| CACAGCCACAGATATAAGAG+TGG | + | chr3.4:72146195-72146214 | None:intergenic | 45.0% | |
| CCACAGTTCTCTTCTGATTG+AGG | + | chr3.4:72144528-72144547 | None:intergenic | 45.0% | |
| CCTCAATCAGAAGAGAACTG+TGG | - | chr3.4:72144525-72144544 | MS.gene29028:CDS | 45.0% | |
| GGTGAAACAACAGAACTGGA+AGG | - | chr3.4:72144949-72144968 | MS.gene29028:intron | 45.0% | |
| TAACCAGGTCAACCCTATGA+AGG | - | chr3.4:72145689-72145708 | MS.gene29028:intron | 45.0% | |
| TATCTGTGAAGCTAGGACCA+TGG | + | chr3.4:72146644-72146663 | None:intergenic | 45.0% | |
| TCATTCAGGCATCTCAAGCA+TGG | - | chr3.4:72146360-72146379 | MS.gene29028:intron | 45.0% | |
| TCTCCTTCTACGTTTCAAGC+TGG | - | chr3.4:72145937-72145956 | MS.gene29028:intron | 45.0% | |
| TGACCAGCTTGAAACGTAGA+AGG | + | chr3.4:72145943-72145962 | None:intergenic | 45.0% | |
| TGCTTATAGATGCAGAGAGG+CGG | - | chr3.4:72145649-72145668 | MS.gene29028:intron | 45.0% | |
| TGTGGCGAAAGCAACGAATT+GGG | - | chr3.4:72144543-72144562 | MS.gene29028:CDS | 45.0% | |
| TTACCTTCATAGGGTTGACC+TGG | + | chr3.4:72145695-72145714 | None:intergenic | 45.0% | |
| TTTCCCCCTTGCAAATGACT+GGG | - | chr3.4:72146756-72146775 | MS.gene29028:intron | 45.0% | |
| ! | GAGTGATTCGGAAGAATCCA+TGG | - | chr3.4:72146624-72146643 | MS.gene29028:intron | 45.0% |
| ! | TTTTCCCCCTTGCAAATGAC+TGG | - | chr3.4:72146755-72146774 | MS.gene29028:intron | 45.0% |
| AAGGTGAAACGGCAGAAGCT+AGG | - | chr3.4:72145598-72145617 | MS.gene29028:intron | 50.0% | |
| CATCTCAAGCATGGATGGAG+TGG | - | chr3.4:72146369-72146388 | MS.gene29028:intron | 50.0% | |
| CTGTGGCGAAAGCAACGAAT+TGG | - | chr3.4:72144542-72144561 | MS.gene29028:CDS | 50.0% | |
| CTTCCCAGTCATTTGCAAGG+GGG | + | chr3.4:72146762-72146781 | None:intergenic | 50.0% | |
| GGCTGTGATACAGCCTGAAA+TGG | - | chr3.4:72146208-72146227 | MS.gene29028:intron | 50.0% | |
| TCAGGCATCTCAAGCATGGA+TGG | - | chr3.4:72146364-72146383 | MS.gene29028:intron | 50.0% | |
| TGATGGAAGAGGAACCCTTG+AGG | - | chr3.4:72145575-72145594 | MS.gene29028:intron | 50.0% | |
| ! | TGCCGTTTCACCTTCCTCAA+GGG | + | chr3.4:72145592-72145611 | None:intergenic | 50.0% |
| GGAAGAGGAACCCTTGAGGA+AGG | - | chr3.4:72145579-72145598 | MS.gene29028:intron | 55.0% | |
| GGACATCTCTTAGCCGCAGA+AGG | - | chr3.4:72146949-72146968 | MS.gene29028:CDS | 55.0% | |
| ! | CTGCCGTTTCACCTTCCTCA+AGG | + | chr3.4:72145593-72145612 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 72144511 | 72147005 | 72144511 | ID=MS.gene29028 |
| chr3.4 | mRNA | 72144511 | 72147005 | 72144511 | ID=MS.gene29028.t1;Parent=MS.gene29028 |
| chr3.4 | exon | 72146921 | 72147005 | 72146921 | ID=MS.gene29028.t1.exon1;Parent=MS.gene29028.t1 |
| chr3.4 | CDS | 72146921 | 72147005 | 72146921 | ID=cds.MS.gene29028.t1;Parent=MS.gene29028.t1 |
| chr3.4 | exon | 72146480 | 72146554 | 72146480 | ID=MS.gene29028.t1.exon2;Parent=MS.gene29028.t1 |
| chr3.4 | CDS | 72146480 | 72146554 | 72146480 | ID=cds.MS.gene29028.t1;Parent=MS.gene29028.t1 |
| chr3.4 | exon | 72145806 | 72145945 | 72145806 | ID=MS.gene29028.t1.exon3;Parent=MS.gene29028.t1 |
| chr3.4 | CDS | 72145806 | 72145945 | 72145806 | ID=cds.MS.gene29028.t1;Parent=MS.gene29028.t1 |
| chr3.4 | exon | 72145011 | 72145148 | 72145011 | ID=MS.gene29028.t1.exon4;Parent=MS.gene29028.t1 |
| chr3.4 | CDS | 72145011 | 72145148 | 72145011 | ID=cds.MS.gene29028.t1;Parent=MS.gene29028.t1 |
| chr3.4 | exon | 72144511 | 72144717 | 72144511 | ID=MS.gene29028.t1.exon5;Parent=MS.gene29028.t1 |
| chr3.4 | CDS | 72144511 | 72144717 | 72144511 | ID=cds.MS.gene29028.t1;Parent=MS.gene29028.t1 |
| Gene Sequence |
| Protein sequence |
