Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44108.t1 | XP_024630831.1 | 89.6 | 480 | 48 | 1 | 1 | 480 | 1 | 478 | 3.30E-239 | 837.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44108.t1 | Q944A6 | 50.5 | 465 | 217 | 4 | 29 | 480 | 22 | 486 | 2.9e-127 | 456.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44108.t1 | G7I852 | 89.2 | 480 | 50 | 1 | 1 | 480 | 1 | 478 | 2.0e-238 | 834.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene44108 | 0.846563 | 2.01E-59 | -1.69E-46 |
| MS.gene049217 | MS.gene44108 | 0.806661 | 7.38E-50 | -1.69E-46 |
| MS.gene049222 | MS.gene44108 | 0.853698 | 2.01E-61 | -1.69E-46 |
| MS.gene049232 | MS.gene44108 | 0.871337 | 7.38E-67 | -1.69E-46 |
| MS.gene049285 | MS.gene44108 | 0.864982 | 8.22E-65 | -1.69E-46 |
| MS.gene049320 | MS.gene44108 | 0.858268 | 9.25E-63 | -1.69E-46 |
| MS.gene049396 | MS.gene44108 | 0.809797 | 1.58E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene44108 | 0.844042 | 9.66E-59 | -1.69E-46 |
| MS.gene049633 | MS.gene44108 | 0.823425 | 1.40E-53 | -1.69E-46 |
| MS.gene05010 | MS.gene44108 | 0.87247 | 3.10E-67 | -1.69E-46 |
| MS.gene050163 | MS.gene44108 | 0.806194 | 9.26E-50 | -1.69E-46 |
| MS.gene050165 | MS.gene44108 | 0.816069 | 6.69E-52 | -1.69E-46 |
| MS.gene050170 | MS.gene44108 | 0.884806 | 1.40E-71 | -1.69E-46 |
| MS.gene050216 | MS.gene44108 | 0.828589 | 8.27E-55 | -1.69E-46 |
| MS.gene050323 | MS.gene44108 | 0.882676 | 8.53E-71 | -1.69E-46 |
| MS.gene050333 | MS.gene44108 | 0.813223 | 2.85E-51 | -1.69E-46 |
| MS.gene050496 | MS.gene44108 | 0.895381 | 1.01E-75 | -1.69E-46 |
| MS.gene050502 | MS.gene44108 | 0.808501 | 3.00E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene44108 | 0.865119 | 7.44E-65 | -1.69E-46 |
| MS.gene050518 | MS.gene44108 | 0.837187 | 6.03E-57 | -1.69E-46 |
| MS.gene050577 | MS.gene44108 | 0.836695 | 8.05E-57 | -1.69E-46 |
| MS.gene050612 | MS.gene44108 | 0.854641 | 1.07E-61 | -1.69E-46 |
| MS.gene050662 | MS.gene44108 | 0.814566 | 1.44E-51 | -1.69E-46 |
| MS.gene050675 | MS.gene44108 | 0.841109 | 5.80E-58 | -1.69E-46 |
| MS.gene050697 | MS.gene44108 | 0.815356 | 9.64E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene44108 | 0.840811 | 6.94E-58 | -1.69E-46 |
| MS.gene050747 | MS.gene44108 | 0.822672 | 2.09E-53 | -1.69E-46 |
| MS.gene050772 | MS.gene44108 | 0.858605 | 7.35E-63 | -1.69E-46 |
| MS.gene05080 | MS.gene44108 | 0.832572 | 8.75E-56 | -1.69E-46 |
| MS.gene050868 | MS.gene44108 | 0.866941 | 1.97E-65 | -1.69E-46 |
| MS.gene050871 | MS.gene44108 | 0.867514 | 1.29E-65 | -1.69E-46 |
| MS.gene050876 | MS.gene44108 | 0.825986 | 3.48E-54 | -1.69E-46 |
| MS.gene050904 | MS.gene44108 | 0.811053 | 8.48E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene44108 | 0.82009 | 8.24E-53 | -1.69E-46 |
| MS.gene050986 | MS.gene44108 | 0.836627 | 8.38E-57 | -1.69E-46 |
| MS.gene051268 | MS.gene44108 | 0.824179 | 9.28E-54 | -1.69E-46 |
| MS.gene051317 | MS.gene44108 | 0.821933 | 3.10E-53 | -1.69E-46 |
| MS.gene051364 | MS.gene44108 | -0.819069 | 1.41E-52 | -1.69E-46 |
| MS.gene051366 | MS.gene44108 | -0.821233 | 4.50E-53 | -1.69E-46 |
| MS.gene051367 | MS.gene44108 | -0.805861 | 1.09E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene44108 | 0.838787 | 2.34E-57 | -1.69E-46 |
| MS.gene051838 | MS.gene44108 | 0.819995 | 8.67E-53 | -1.69E-46 |
| MS.gene051874 | MS.gene44108 | 0.801817 | 7.53E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene44108 | 0.854157 | 1.48E-61 | -1.69E-46 |
| MS.gene052482 | MS.gene44108 | 0.825655 | 4.16E-54 | -1.69E-46 |
| MS.gene052486 | MS.gene44108 | 0.829549 | 4.84E-55 | -1.69E-46 |
| MS.gene052503 | MS.gene44108 | 0.845205 | 4.69E-59 | -1.69E-46 |
| MS.gene052504 | MS.gene44108 | 0.80552 | 1.28E-49 | -1.69E-46 |
| MS.gene052506 | MS.gene44108 | 0.842924 | 1.92E-58 | -1.69E-46 |
| MS.gene052615 | MS.gene44108 | 0.813763 | 2.17E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene44108 | 0.854011 | 1.64E-61 | -1.69E-46 |
| MS.gene052823 | MS.gene44108 | 0.843008 | 1.82E-58 | -1.69E-46 |
| MS.gene052825 | MS.gene44108 | 0.841343 | 5.03E-58 | -1.69E-46 |
| MS.gene052916 | MS.gene44108 | 0.834527 | 2.85E-56 | -1.69E-46 |
| MS.gene052966 | MS.gene44108 | 0.840683 | 7.50E-58 | -1.69E-46 |
| MS.gene052986 | MS.gene44108 | 0.819774 | 9.74E-53 | -1.69E-46 |
| MS.gene052987 | MS.gene44108 | 0.825053 | 5.78E-54 | -1.69E-46 |
| MS.gene053117 | MS.gene44108 | 0.80085 | 1.19E-48 | -1.69E-46 |
| MS.gene053203 | MS.gene44108 | 0.852042 | 5.98E-61 | -1.69E-46 |
| MS.gene053213 | MS.gene44108 | 0.843449 | 1.39E-58 | -1.69E-46 |
| MS.gene053286 | MS.gene44108 | 0.848221 | 7.04E-60 | -1.69E-46 |
| MS.gene053436 | MS.gene44108 | 0.815211 | 1.04E-51 | -1.69E-46 |
| MS.gene053479 | MS.gene44108 | 0.819286 | 1.26E-52 | -1.69E-46 |
| MS.gene053480 | MS.gene44108 | 0.818629 | 1.77E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene44108 | 0.853427 | 2.41E-61 | -1.69E-46 |
| MS.gene053626 | MS.gene44108 | 0.842353 | 2.72E-58 | -1.69E-46 |
| MS.gene053632 | MS.gene44108 | 0.816571 | 5.16E-52 | -1.69E-46 |
| MS.gene053633 | MS.gene44108 | 0.843421 | 1.42E-58 | -1.69E-46 |
| MS.gene053824 | MS.gene44108 | 0.85682 | 2.48E-62 | -1.69E-46 |
| MS.gene053916 | MS.gene44108 | 0.821407 | 4.10E-53 | -1.69E-46 |
| MS.gene054003 | MS.gene44108 | 0.829163 | 6.00E-55 | -1.69E-46 |
| MS.gene054595 | MS.gene44108 | 0.826831 | 2.19E-54 | -1.69E-46 |
| MS.gene054600 | MS.gene44108 | 0.818177 | 2.25E-52 | -1.69E-46 |
| MS.gene054642 | MS.gene44108 | 0.84843 | 6.16E-60 | -1.69E-46 |
| MS.gene054706 | MS.gene44108 | -0.830022 | 3.71E-55 | -1.69E-46 |
| MS.gene05470 | MS.gene44108 | 0.832578 | 8.73E-56 | -1.69E-46 |
| MS.gene054954 | MS.gene44108 | 0.886985 | 2.12E-72 | -1.69E-46 |
| MS.gene055224 | MS.gene44108 | 0.810587 | 1.07E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene44108 | 0.860404 | 2.11E-63 | -1.69E-46 |
| MS.gene055502 | MS.gene44108 | 0.862959 | 3.50E-64 | -1.69E-46 |
| MS.gene055577 | MS.gene44108 | 0.869143 | 3.86E-66 | -1.69E-46 |
| MS.gene055722 | MS.gene44108 | 0.82019 | 7.82E-53 | -1.69E-46 |
| MS.gene055748 | MS.gene44108 | 0.822381 | 2.44E-53 | -1.69E-46 |
| MS.gene055750 | MS.gene44108 | 0.837016 | 6.66E-57 | -1.69E-46 |
| MS.gene055751 | MS.gene44108 | 0.833011 | 6.81E-56 | -1.69E-46 |
| MS.gene055776 | MS.gene44108 | 0.854399 | 1.26E-61 | -1.69E-46 |
| MS.gene055849 | MS.gene44108 | 0.816761 | 4.68E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene44108 | 0.864889 | 8.78E-65 | -1.69E-46 |
| MS.gene055941 | MS.gene44108 | 0.803322 | 3.68E-49 | -1.69E-46 |
| MS.gene056046 | MS.gene44108 | 0.961698 | 5.27E-120 | -1.69E-46 |
| MS.gene056387 | MS.gene44108 | 0.84044 | 8.69E-58 | -1.69E-46 |
| MS.gene056487 | MS.gene44108 | 0.804103 | 2.54E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene44108 | 0.898974 | 3.13E-77 | -1.69E-46 |
| MS.gene056510 | MS.gene44108 | 0.86588 | 4.28E-65 | -1.69E-46 |
| MS.gene056657 | MS.gene44108 | 0.867571 | 1.24E-65 | -1.69E-46 |
| MS.gene056692 | MS.gene44108 | 0.824115 | 9.61E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene44108 | 0.831452 | 1.66E-55 | -1.69E-46 |
| MS.gene057086 | MS.gene44108 | 0.802538 | 5.35E-49 | -1.69E-46 |
| MS.gene057173 | MS.gene44108 | -0.812944 | 3.29E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene44108 | 0.80155 | 8.54E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene44108 | 0.805384 | 1.37E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene44108 | 0.800986 | 1.11E-48 | -1.69E-46 |
| MS.gene057857 | MS.gene44108 | 0.835622 | 1.51E-56 | -1.69E-46 |
| MS.gene05787 | MS.gene44108 | 0.816056 | 6.73E-52 | -1.69E-46 |
| MS.gene058157 | MS.gene44108 | 0.838313 | 3.10E-57 | -1.69E-46 |
| MS.gene058334 | MS.gene44108 | -0.824695 | 7.02E-54 | -1.69E-46 |
| MS.gene058338 | MS.gene44108 | 0.81345 | 2.54E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene44108 | 0.830424 | 2.96E-55 | -1.69E-46 |
| MS.gene058382 | MS.gene44108 | -0.814887 | 1.23E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene44108 | 0.858279 | 9.19E-63 | -1.69E-46 |
| MS.gene058544 | MS.gene44108 | 0.818061 | 2.39E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene44108 | 0.839294 | 1.73E-57 | -1.69E-46 |
| MS.gene058838 | MS.gene44108 | 0.835399 | 1.72E-56 | -1.69E-46 |
| MS.gene059022 | MS.gene44108 | 0.864567 | 1.11E-64 | -1.69E-46 |
| MS.gene059023 | MS.gene44108 | 0.851793 | 7.04E-61 | -1.69E-46 |
| MS.gene05913 | MS.gene44108 | 0.847555 | 1.07E-59 | -1.69E-46 |
| MS.gene059367 | MS.gene44108 | 0.815557 | 8.70E-52 | -1.69E-46 |
| MS.gene059667 | MS.gene44108 | 0.826922 | 2.08E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene44108 | 0.858869 | 6.13E-63 | -1.69E-46 |
| MS.gene059699 | MS.gene44108 | -0.821635 | 3.64E-53 | -1.69E-46 |
| MS.gene059701 | MS.gene44108 | -0.814983 | 1.17E-51 | -1.69E-46 |
| MS.gene059703 | MS.gene44108 | -0.832285 | 1.03E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene44108 | 0.865933 | 4.12E-65 | -1.69E-46 |
| MS.gene059756 | MS.gene44108 | 0.805459 | 1.32E-49 | -1.69E-46 |
| MS.gene059801 | MS.gene44108 | 0.819435 | 1.16E-52 | -1.69E-46 |
| MS.gene059837 | MS.gene44108 | 0.854721 | 1.02E-61 | -1.69E-46 |
| MS.gene059865 | MS.gene44108 | 0.885418 | 8.27E-72 | -1.69E-46 |
| MS.gene06000 | MS.gene44108 | 0.847555 | 1.07E-59 | -1.69E-46 |
| MS.gene060482 | MS.gene44108 | 0.85483 | 9.48E-62 | -1.69E-46 |
| MS.gene060526 | MS.gene44108 | 0.800575 | 1.35E-48 | -1.69E-46 |
| MS.gene060595 | MS.gene44108 | -0.838768 | 2.36E-57 | -1.69E-46 |
| MS.gene060703 | MS.gene44108 | 0.877444 | 6.26E-69 | -1.69E-46 |
| MS.gene060762 | MS.gene44108 | 0.855775 | 5.03E-62 | -1.69E-46 |
| MS.gene060778 | MS.gene44108 | 0.869119 | 3.93E-66 | -1.69E-46 |
| MS.gene06077 | MS.gene44108 | 0.855395 | 6.49E-62 | -1.69E-46 |
| MS.gene060823 | MS.gene44108 | -0.801041 | 1.09E-48 | -1.69E-46 |
| MS.gene060835 | MS.gene44108 | 0.809442 | 1.89E-50 | -1.69E-46 |
| MS.gene06097 | MS.gene44108 | 0.803316 | 3.69E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene44108 | 0.893057 | 8.96E-75 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44108.t1 | MTR_1g083050 | 89.792 | 480 | 47 | 1 | 1 | 480 | 1 | 478 | 0.0 | 885 |
| MS.gene44108.t1 | MTR_7g113330 | 54.176 | 467 | 200 | 6 | 25 | 480 | 22 | 485 | 3.68e-162 | 468 |
| MS.gene44108.t1 | MTR_0392s0010 | 47.122 | 469 | 231 | 4 | 28 | 479 | 16 | 484 | 2.43e-147 | 430 |
| MS.gene44108.t1 | MTR_4g119400 | 47.752 | 467 | 220 | 4 | 28 | 479 | 23 | 480 | 1.90e-142 | 417 |
| MS.gene44108.t1 | MTR_4g119400 | 48.064 | 439 | 204 | 4 | 28 | 451 | 23 | 452 | 2.09e-132 | 391 |
| MS.gene44108.t1 | MTR_4g119400 | 48.250 | 400 | 186 | 3 | 28 | 415 | 23 | 413 | 7.95e-124 | 367 |
| MS.gene44108.t1 | MTR_0392s0010 | 48.563 | 348 | 175 | 2 | 136 | 479 | 22 | 369 | 4.27e-111 | 333 |
| MS.gene44108.t1 | MTR_0392s0010 | 46.927 | 358 | 176 | 3 | 28 | 371 | 16 | 373 | 1.30e-109 | 330 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44108.t1 | AT1G09020 | 49.087 | 493 | 231 | 4 | 1 | 480 | 1 | 486 | 3.52e-157 | 455 |
Find 116 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATACTTCCAACGTGTTTA+AGG | 0.148528 | 1.3:-58600570 | MS.gene44108:CDS |
| CCATTCCTCACTTGTTTGTT+TGG | 0.213376 | 1.3:-58606245 | MS.gene44108:CDS |
| TGGCTCCTGTGTGGGATTCT+AGG | 0.216648 | 1.3:-58603272 | MS.gene44108:CDS |
| CACTTGTTTGTTTGGCCTCA+TGG | 0.250434 | 1.3:-58606237 | MS.gene44108:CDS |
| ATACCAATTGTGGATGATTC+TGG | 0.255262 | 1.3:-58601196 | MS.gene44108:CDS |
| CGTTGCAATTGGCTGTTTAT+TGG | 0.259307 | 1.3:+58601439 | None:intergenic |
| GTTCAATACCTTTGGGTAGA+TGG | 0.263569 | 1.3:-58601481 | MS.gene44108:CDS |
| TTTCTATGCGGTTCTTTCAC+TGG | 0.272488 | 1.3:-58606201 | MS.gene44108:CDS |
| ATGCTTTCAGGAAGTATCTT+TGG | 0.275765 | 1.3:-58603292 | MS.gene44108:intron |
| AAGCGTTTCAAGAACGATTA+TGG | 0.296514 | 1.3:-58601533 | MS.gene44108:CDS |
| ATGGAACGCTTTGCTAATTC+TGG | 0.300906 | 1.3:-58600526 | MS.gene44108:intron |
| ACCGATTGGTTCAATACCTT+TGG | 0.309132 | 1.3:-58601489 | MS.gene44108:CDS |
| GCATTGAATTTGAGACAAAT+TGG | 0.317046 | 1.3:-58600610 | MS.gene44108:CDS |
| TACTGCTTCTCATTTGCTTC+CGG | 0.327253 | 1.3:-58603624 | MS.gene44108:CDS |
| TCTCATTTGCTTCCGGAGTC+TGG | 0.337135 | 1.3:-58603617 | MS.gene44108:CDS |
| AACAAGTGAGGAATGGAAAA+AGG | 0.342501 | 1.3:+58606252 | None:intergenic |
| GGCATCCCATGTAACATATA+TGG | 0.360054 | 1.3:+58604351 | None:intergenic |
| GAACGATTATGGTTCTTTGC+CGG | 0.389922 | 1.3:-58601522 | MS.gene44108:CDS |
| CGCCACAGTGAACACTATTT+CGG | 0.390725 | 1.3:-58604382 | MS.gene44108:CDS |
| CCGATTGGTTCAATACCTTT+GGG | 0.410101 | 1.3:-58601488 | MS.gene44108:CDS |
| GAGCAGCAGCCATTTATAAA+CGG | 0.418064 | 1.3:-58604411 | MS.gene44108:CDS |
| AGCAGCAGCCATTTATAAAC+GGG | 0.425365 | 1.3:-58604410 | MS.gene44108:CDS |
| CGAATTGAAGGCCGCCCGAC+TGG | 0.426158 | 1.3:-58605745 | MS.gene44108:CDS |
| GCTGCAGGTAGAGGAGGAAA+TGG | 0.428068 | 1.3:-58606309 | MS.gene44108:CDS |
| CCAATCGGTATTTGAAGAAC+CGG | 0.430303 | 1.3:+58601503 | None:intergenic |
| TTTGGCCTTAGCGTTGCAAT+TGG | 0.432792 | 1.3:+58601428 | None:intergenic |
| ATTGCATATTCTATATGAAC+AGG | 0.444363 | 1.3:-58603456 | MS.gene44108:intron |
| TCTAGGAAGTGCAAGTTTGT+TGG | 0.444547 | 1.3:-58603255 | MS.gene44108:CDS |
| AATGTGGAACTGATAGTAAT+GGG | 0.445752 | 1.3:-58601932 | MS.gene44108:CDS |
| GGTTCATCAGCTGCAGGTAG+AGG | 0.446142 | 1.3:-58606318 | MS.gene44108:CDS |
| TGATGTGTTCAAATTATTGT+TGG | 0.453571 | 1.3:-58600275 | MS.gene44108:CDS |
| TTCAATACCTTTGGGTAGAT+GGG | 0.455387 | 1.3:-58601480 | MS.gene44108:CDS |
| TTCTATGCGGTTCTTTCACT+GGG | 0.457978 | 1.3:-58606200 | MS.gene44108:intron |
| TTACCAATGTCTCGAATTGA+AGG | 0.465371 | 1.3:-58605757 | MS.gene44108:CDS |
| GCGGTGAACCCGTTTATAAA+TGG | 0.465452 | 1.3:+58604402 | None:intergenic |
| GGGTAGATGGGCGCCAAAAG+TGG | 0.478271 | 1.3:-58601468 | MS.gene44108:CDS |
| AAGTCCTTCATCAGTAAAAG+TGG | 0.478439 | 1.3:+58601998 | None:intergenic |
| GAACCAGAATCATCCACAAT+TGG | 0.479679 | 1.3:+58601193 | None:intergenic |
| TTCAGTGCTTGAATAATGTC+CGG | 0.484827 | 1.3:+58603219 | None:intergenic |
| AGAGCAAACTCTGGTGTCCT+AGG | 0.487042 | 1.3:+58603689 | None:intergenic |
| TCACAGTGATCTTACTGCAT+TGG | 0.488595 | 1.3:-58601069 | MS.gene44108:intron |
| GATCCCTTGCACACTCCTGC+AGG | 0.489091 | 1.3:+58600309 | None:intergenic |
| TAATTTGAACACATCACCTA+TGG | 0.489576 | 1.3:+58600282 | None:intergenic |
| GTTGTTTGCTACTTGACTCC+AGG | 0.490524 | 1.3:-58605715 | MS.gene44108:CDS |
| GGTAGATGGGCGCCAAAAGT+GGG | 0.495369 | 1.3:-58601467 | MS.gene44108:CDS |
| CCAAATACCGTATGAAATCC+TGG | 0.498485 | 1.3:+58605697 | None:intergenic |
| AGTATCTTTGGCTCCTGTGT+GGG | 0.498993 | 1.3:-58603280 | MS.gene44108:CDS |
| CGATCCATTGCATGTGGTGA+TGG | 0.505024 | 1.3:-58600545 | MS.gene44108:CDS |
| TATATGATGTATATTCAAGA+AGG | 0.507403 | 1.3:-58601168 | MS.gene44108:intron |
| ATGCATTCTTCTTCCGAGGA+CGG | 0.508228 | 1.3:-58601682 | MS.gene44108:CDS |
| CATTATTCAAGCACTGAAAG+AGG | 0.510834 | 1.3:-58603214 | MS.gene44108:intron |
| GATGTGTTCAAATTATTGTT+GGG | 0.510954 | 1.3:-58600274 | MS.gene44108:CDS |
| GAGAGATACTAAAATTATCC+AGG | 0.512926 | 1.3:+58601018 | None:intergenic |
| CAAATTGGAAAATGTCCTTA+CGG | 0.513581 | 1.3:-58600595 | MS.gene44108:CDS |
| CCGGTTCTTCAAATACCGAT+TGG | 0.514318 | 1.3:-58601503 | MS.gene44108:CDS |
| GCAGCACTAAGAGAAGCATT+TGG | 0.515122 | 1.3:+58601410 | None:intergenic |
| GTAATGGGAAAGCATATCCT+TGG | 0.515149 | 1.3:-58601917 | MS.gene44108:CDS |
| CAATGTGGAACTGATAGTAA+TGG | 0.515165 | 1.3:-58601933 | MS.gene44108:CDS |
| TGGTGGTGAAGTCTGCCTGC+AGG | 0.517145 | 1.3:-58600324 | MS.gene44108:CDS |
| CGTTCCATCACCACATGCAA+TGG | 0.521140 | 1.3:+58600541 | None:intergenic |
| AAAGTGGATCGATGACTCTC+CGG | 0.522520 | 1.3:+58602014 | None:intergenic |
| TTTGCTTCCGGAGTCTGGCA+AGG | 0.526888 | 1.3:-58603612 | MS.gene44108:intron |
| TGATTTGAGATTGAAATGTC+AGG | 0.532626 | 1.3:-58606339 | None:intergenic |
| AGCTGCAGATGGGATCTACT+AGG | 0.536186 | 1.3:+58604330 | None:intergenic |
| CTGAGGAGTTGAGCCGTCCT+CGG | 0.536297 | 1.3:+58601669 | None:intergenic |
| TGTTGGAGTGCTTAGTGCAC+CGG | 0.541788 | 1.3:-58603238 | MS.gene44108:CDS |
| CCCAAAGGTATTGAACCAAT+CGG | 0.545010 | 1.3:+58601488 | None:intergenic |
| AAAGGTTGAGGATCAGGTAC+TGG | 0.545680 | 1.3:+58606270 | None:intergenic |
| AGTTAGCTCAATACCAATTG+TGG | 0.548842 | 1.3:-58601206 | MS.gene44108:CDS |
| ATGTCTTCTAGTCTCTCAAA+AGG | 0.548979 | 1.3:+58601748 | None:intergenic |
| TATTATGCATTCTTCTTCCG+AGG | 0.549168 | 1.3:-58601686 | MS.gene44108:CDS |
| TATCAAACCTTGCCAGACTC+CGG | 0.549980 | 1.3:+58603605 | None:intergenic |
| AATGTATGCTAGGATAAGCC+TGG | 0.551088 | 1.3:-58601036 | MS.gene44108:CDS |
| AAGTATCTTTGGCTCCTGTG+TGG | 0.554132 | 1.3:-58603281 | MS.gene44108:CDS |
| ATGTCAGGTTCATCAGCTGC+AGG | 0.555266 | 1.3:-58606324 | MS.gene44108:CDS |
| GCAGAACCATATATGTTACA+TGG | 0.555752 | 1.3:-58604357 | MS.gene44108:CDS |
| AACAGCCAATTGCAACGCTA+AGG | 0.557100 | 1.3:-58601433 | MS.gene44108:CDS |
| TCTGCCTGCAGGAGTGTGCA+AGG | 0.559432 | 1.3:-58600313 | MS.gene44108:CDS |
| GCTATCGCTCTAATGAATCA+AGG | 0.560125 | 1.3:-58601389 | MS.gene44108:intron |
| CCAAACAAACAAGTGAGGAA+TGG | 0.562084 | 1.3:+58606245 | None:intergenic |
| AAACAACTTGAAATCCAGTC+GGG | 0.566738 | 1.3:+58605731 | None:intergenic |
| GAATGCATAATAGCAACTAC+TGG | 0.570220 | 1.3:+58601697 | None:intergenic |
| CGGCCTTCAATTCGAGACAT+TGG | 0.573549 | 1.3:+58605754 | None:intergenic |
| TCATCAGCTGCAGGTAGAGG+AGG | 0.573943 | 1.3:-58606315 | MS.gene44108:CDS |
| CTTGACTCCAGGATTTCATA+CGG | 0.581995 | 1.3:-58605704 | MS.gene44108:intron |
| TACAGGTGTTGGAGAAGTTG+TGG | 0.586664 | 1.3:-58600344 | MS.gene44108:intron |
| AGAAACATACTTTAGCAGCA+TGG | 0.589951 | 1.3:-58601974 | MS.gene44108:CDS |
| GAGACATGCAGAGCAAACTC+TGG | 0.590289 | 1.3:+58603680 | None:intergenic |
| GTAGATGGGCGCCAAAAGTG+GGG | 0.591294 | 1.3:-58601466 | MS.gene44108:CDS |
| CTAGATGTGAAATGTATGCT+AGG | 0.597927 | 1.3:-58601046 | MS.gene44108:CDS |
| CACAGTGAACACTATTTCGG+TGG | 0.598731 | 1.3:-58604379 | MS.gene44108:CDS |
| GAAGTCATATGTAGCAGCTG+AGG | 0.600897 | 1.3:+58601652 | None:intergenic |
| GTGCAAGGGATCATTTCCAT+AGG | 0.609204 | 1.3:-58600298 | MS.gene44108:CDS |
| CAGAACCATATATGTTACAT+GGG | 0.619520 | 1.3:-58604356 | MS.gene44108:CDS |
| CATCACCACATGCAATGGAT+CGG | 0.619982 | 1.3:+58600546 | None:intergenic |
| TAGATGGGCGCCAAAAGTGG+GGG | 0.625100 | 1.3:-58601465 | MS.gene44108:CDS |
| GTTGGAAGTATAAGTCCGTA+AGG | 0.626388 | 1.3:+58600580 | None:intergenic |
| CTGCCTGCAGGAGTGTGCAA+GGG | 0.626861 | 1.3:-58600312 | MS.gene44108:CDS |
| CAAACAACTTGAAATCCAGT+CGG | 0.630864 | 1.3:+58605730 | None:intergenic |
| AAGGTCCGATCCATTGCATG+TGG | 0.637910 | 1.3:-58600551 | MS.gene44108:CDS |
| CGAAATAGTGTTCACTGTGG+CGG | 0.638369 | 1.3:+58604383 | None:intergenic |
| GAGAGAAAATTACAGCAATG+TGG | 0.643369 | 1.3:-58601948 | MS.gene44108:CDS |
| CTTACATCAACAAAACTCCA+AGG | 0.646824 | 1.3:+58601900 | None:intergenic |
| TTTGGCGCCCATCTACCCAA+AGG | 0.652925 | 1.3:+58601473 | None:intergenic |
| TTTGTGTGGATGGTGTGTGG+CGG | 0.661221 | 1.3:-58604440 | MS.gene44108:CDS |
| TATTAATGTCACTAGACACA+TGG | 0.669317 | 1.3:-58604301 | MS.gene44108:intron |
| GGATCGGACCTTAAACACGT+TGG | 0.671025 | 1.3:+58600562 | None:intergenic |
| CAACTTGAAATCCAGTCGGG+CGG | 0.674400 | 1.3:+58605734 | None:intergenic |
| GGTGAAACCGCGTTTCTATG+CGG | 0.677368 | 1.3:-58606213 | MS.gene44108:CDS |
| TGAGGCCAAACAAACAAGTG+AGG | 0.681158 | 1.3:+58606240 | None:intergenic |
| TTGTTTGTTTGGCCTCATGG+AGG | 0.688091 | 1.3:-58606234 | MS.gene44108:CDS |
| AGGTGTTGGAGAAGTTGTGG+TGG | 0.695836 | 1.3:-58600341 | MS.gene44108:CDS |
| CACTTCCTAGAATCCCACAC+AGG | 0.698640 | 1.3:+58603267 | None:intergenic |
| GAAAGAACCGCATAGAAACG+CGG | 0.713783 | 1.3:+58606206 | None:intergenic |
| AACGCGGTTTCACCTCCATG+AGG | 0.729601 | 1.3:+58606222 | None:intergenic |
| CACCGAAATAGTGTTCACTG+TGG | 0.763286 | 1.3:+58604380 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATTAGAGATATTTATT+TGG | - | chr1.3:58603711-58603730 | MS.gene44108:intron | 10.0% |
| !! | AAGAACTAAAAAATATATAT+AGG | - | chr1.3:58602538-58602557 | MS.gene44108:intron | 10.0% |
| !! | AATATTAGAGATATTTATTT+GGG | - | chr1.3:58603712-58603731 | MS.gene44108:intron | 10.0% |
| !! | AGAACTAAAAAATATATATA+GGG | - | chr1.3:58602539-58602558 | MS.gene44108:intron | 10.0% |
| !! | ATACATTAAAATTAAAATAC+AGG | - | chr1.3:58606233-58606252 | MS.gene44108:CDS | 10.0% |
| !! | ATATAAATAAATATCCAAAA+TGG | + | chr1.3:58603815-58603834 | None:intergenic | 10.0% |
| !!! | AATTCTATTATCATTATTTT+AGG | - | chr1.3:58603632-58603651 | MS.gene44108:CDS | 10.0% |
| !!! | AGATTATTTTAATATAATAC+GGG | + | chr1.3:58604054-58604073 | None:intergenic | 10.0% |
| !!! | ATTTTGGATATTTATTTATA+TGG | - | chr1.3:58603814-58603833 | MS.gene44108:intron | 10.0% |
| !!! | GAGATTATTTTAATATAATA+CGG | + | chr1.3:58604055-58604074 | None:intergenic | 10.0% |
| !!! | TAAATTTTCTACTTAAAATT+GGG | + | chr1.3:58604764-58604783 | None:intergenic | 10.0% |
| !! | AATGAAAGTTTATTTACAAT+AGG | + | chr1.3:58601823-58601842 | None:intergenic | 15.0% |
| !! | AGATAAATGTTAATACAAAT+CGG | - | chr1.3:58601197-58601216 | MS.gene44108:CDS | 15.0% |
| !! | ATAATGATAATAGAATTCAA+TGG | + | chr1.3:58603629-58603648 | None:intergenic | 15.0% |
| !! | ATGTATAAATTTAATGCTAT+TGG | + | chr1.3:58605653-58605672 | None:intergenic | 15.0% |
| !! | GTTAAATTTCAATTAGTATA+AGG | - | chr1.3:58605824-58605843 | MS.gene44108:intron | 15.0% |
| !! | GTTAGACTAAATATATTTAT+CGG | - | chr1.3:58605901-58605920 | MS.gene44108:intron | 15.0% |
| !! | TAAAATATATATTGAACACA+AGG | + | chr1.3:58603273-58603292 | None:intergenic | 15.0% |
| !! | TTAAATTGAATATAAAGTGA+AGG | - | chr1.3:58605791-58605810 | MS.gene44108:intron | 15.0% |
| !! | TTAGACTAAATATATTTATC+GGG | - | chr1.3:58605902-58605921 | MS.gene44108:intron | 15.0% |
| !!! | ATAGATTTTGTAAAAACAAA+TGG | - | chr1.3:58604088-58604107 | MS.gene44108:intron | 15.0% |
| !!! | ATATGAATTTTTAAAATCTG+AGG | - | chr1.3:58600925-58600944 | MS.gene44108:intron | 15.0% |
| !!! | CTAAATATTTTTTACCATTT+AGG | - | chr1.3:58603557-58603576 | MS.gene44108:intron | 15.0% |
| !!! | GATTTTAAAAATTCATATAG+AGG | + | chr1.3:58600923-58600942 | None:intergenic | 15.0% |
| !!! | GTAAATTTTCTACTTAAAAT+TGG | + | chr1.3:58604765-58604784 | None:intergenic | 15.0% |
| !!! | TATATTTATTTTTAATCTGC+AGG | - | chr1.3:58604818-58604837 | MS.gene44108:intron | 15.0% |
| !!! | TCAATAAAAGAAGAATTTTT+AGG | + | chr1.3:58602695-58602714 | None:intergenic | 15.0% |
| !! | AAAAAAATTAATCGGTGAAA+GGG | - | chr1.3:58602610-58602629 | MS.gene44108:intron | 20.0% |
| !! | AAAAATTGCATAATATGAGA+GGG | - | chr1.3:58602095-58602114 | MS.gene44108:intron | 20.0% |
| !! | AAAATATATATAGGGAGTTT+CGG | - | chr1.3:58602547-58602566 | MS.gene44108:intron | 20.0% |
| !! | AAACAATCATCAATTGAATA+AGG | + | chr1.3:58602645-58602664 | None:intergenic | 20.0% |
| !! | AAGAGAATATAAGAATAATC+AGG | + | chr1.3:58602779-58602798 | None:intergenic | 20.0% |
| !! | ACTAATTAATTATGCCTAAA+TGG | + | chr1.3:58603574-58603593 | None:intergenic | 20.0% |
| !! | ATATTTAGCATAAATCAACT+TGG | + | chr1.3:58603545-58603564 | None:intergenic | 20.0% |
| !! | ATTGTATAGTTTATTCAACA+TGG | - | chr1.3:58600686-58600705 | MS.gene44108:intron | 20.0% |
| !! | ATTTATTTATATGGTATGTC+TGG | - | chr1.3:58603823-58603842 | MS.gene44108:intron | 20.0% |
| !! | CAAAAAAAAAACTTACCAAA+AGG | + | chr1.3:58600618-58600637 | None:intergenic | 20.0% |
| !! | CTTAAGTGTGTTATATATAT+AGG | - | chr1.3:58602384-58602403 | MS.gene44108:intron | 20.0% |
| !! | GCATAAATTTCAATACTATA+AGG | + | chr1.3:58602837-58602856 | None:intergenic | 20.0% |
| !! | GGAAAATAGAATAAAAGATA+AGG | + | chr1.3:58604284-58604303 | None:intergenic | 20.0% |
| !! | GTTATACTTCAATACATTAT+TGG | - | chr1.3:58603882-58603901 | MS.gene44108:intron | 20.0% |
| !! | TAAAAAAATTAATCGGTGAA+AGG | - | chr1.3:58602609-58602628 | MS.gene44108:intron | 20.0% |
| !! | TAAAAATTGCATAATATGAG+AGG | - | chr1.3:58602094-58602113 | MS.gene44108:intron | 20.0% |
| !! | TAAAATTAAAATACAGGTGT+TGG | - | chr1.3:58606239-58606258 | MS.gene44108:CDS | 20.0% |
| !! | TAAATTTGAATCTACTCATT+TGG | - | chr1.3:58602032-58602051 | MS.gene44108:intron | 20.0% |
| !! | TATATGATGTATATTCAAGA+AGG | - | chr1.3:58605426-58605445 | MS.gene44108:intron | 20.0% |
| !! | TCTAGAAAATTATTTGAGTA+TGG | - | chr1.3:58600543-58600562 | MS.gene44108:CDS | 20.0% |
| !! | TGAAGTTAAAAGAAATTACA+AGG | - | chr1.3:58603513-58603532 | MS.gene44108:intron | 20.0% |
| !! | TTAACTTAATATATGCTTTC+AGG | - | chr1.3:58603290-58603309 | MS.gene44108:intron | 20.0% |
| !!! | AATCAATCATTTTATGTAGT+AGG | - | chr1.3:58603660-58603679 | MS.gene44108:CDS | 20.0% |
| !!! | AATTTGCTTAAGATAATTTC+AGG | - | chr1.3:58603078-58603097 | MS.gene44108:intron | 20.0% |
| !!! | AATTTTTCTCATATGTGTTA+AGG | + | chr1.3:58604722-58604741 | None:intergenic | 20.0% |
| !!! | ATAAAAGAAGAATTTTTAGG+AGG | + | chr1.3:58602692-58602711 | None:intergenic | 20.0% |
| !!! | ATAGCAATTTATCTGATTTT+TGG | - | chr1.3:58603048-58603067 | MS.gene44108:intron | 20.0% |
| !!! | TAAAAGAAGAATTTTTAGGA+GGG | + | chr1.3:58602691-58602710 | None:intergenic | 20.0% |
| !!! | TAATTTCTTTTAACTTCACA+TGG | + | chr1.3:58603511-58603530 | None:intergenic | 20.0% |
| !!! | TATTCAATTGATGATTGTTT+TGG | - | chr1.3:58602645-58602664 | MS.gene44108:intron | 20.0% |
| !!! | TGTTTTTGTACTATAATTTC+TGG | - | chr1.3:58601459-58601478 | MS.gene44108:CDS | 20.0% |
| !!! | TTTAAAATTTTTGCAATGCA+AGG | - | chr1.3:58604872-58604891 | MS.gene44108:intron | 20.0% |
| !!! | TTTTTTTTTCTTTTTCCGTA+AGG | - | chr1.3:58605860-58605879 | MS.gene44108:intron | 20.0% |
| ! | AAAATATATGCAACAAACCA+AGG | + | chr1.3:58602350-58602369 | None:intergenic | 25.0% |
| ! | AAATATATGCAACAAACCAA+GGG | + | chr1.3:58602349-58602368 | None:intergenic | 25.0% |
| ! | AAGGTCTGTTAGATAAATTA+GGG | + | chr1.3:58604265-58604284 | None:intergenic | 25.0% |
| ! | ATATAGCAACATTTGGATAA+AGG | + | chr1.3:58606115-58606134 | None:intergenic | 25.0% |
| ! | ATGTAAGCTTTCACATTTAT+TGG | - | chr1.3:58604983-58605002 | MS.gene44108:intron | 25.0% |
| ! | ATGTAATGAAAGAGTTGAAA+AGG | + | chr1.3:58601406-58601425 | None:intergenic | 25.0% |
| ! | ATTGCATATTCTATATGAAC+AGG | - | chr1.3:58603138-58603157 | MS.gene44108:intron | 25.0% |
| ! | CATAATGAACTAATGAAACA+TGG | - | chr1.3:58605702-58605721 | MS.gene44108:intron | 25.0% |
| ! | CATGCATATGTTTAAAAGTT+AGG | + | chr1.3:58604518-58604537 | None:intergenic | 25.0% |
| ! | CATGTTTCATTAGTTCATTA+TGG | + | chr1.3:58605704-58605723 | None:intergenic | 25.0% |
| ! | CTAACAATATTAGCATTGTT+AGG | + | chr1.3:58605886-58605905 | None:intergenic | 25.0% |
| ! | CTTATAGATATAGCAACATT+TGG | + | chr1.3:58606122-58606141 | None:intergenic | 25.0% |
| ! | GATGTGTTCAAATTATTGTT+GGG | - | chr1.3:58606320-58606339 | MS.gene44108:CDS | 25.0% |
| ! | GATTAACATTATCGTCAAAA+TGG | - | chr1.3:58602424-58602443 | MS.gene44108:intron | 25.0% |
| ! | TAAGGTCTGTTAGATAAATT+AGG | + | chr1.3:58604266-58604285 | None:intergenic | 25.0% |
| ! | TCATGTAAATAGTGTAATGA+GGG | + | chr1.3:58603177-58603196 | None:intergenic | 25.0% |
| ! | TCTCACAGTTATTAATGTAT+CGG | - | chr1.3:58602005-58602024 | MS.gene44108:CDS | 25.0% |
| ! | TGATGTGTTCAAATTATTGT+TGG | - | chr1.3:58606319-58606338 | MS.gene44108:CDS | 25.0% |
| ! | TGTAAAAACAAATGGTATAC+AGG | - | chr1.3:58604096-58604115 | MS.gene44108:intron | 25.0% |
| ! | TGTAGTCAAGCTATAAATAA+GGG | - | chr1.3:58604016-58604035 | MS.gene44108:intron | 25.0% |
| ! | TTCACTTATAGTAGAAGATA+TGG | - | chr1.3:58603909-58603928 | MS.gene44108:intron | 25.0% |
| ! | TTGAATGAAAACTGAACAAT+TGG | - | chr1.3:58603428-58603447 | MS.gene44108:intron | 25.0% |
| ! | TTGTAGTCAAGCTATAAATA+AGG | - | chr1.3:58604015-58604034 | MS.gene44108:intron | 25.0% |
| !! | AAAGAGGTTTGTAGAAATTT+TGG | - | chr1.3:58603396-58603415 | MS.gene44108:intron | 25.0% |
| !! | AATACATTTTGCTTCTAACA+TGG | + | chr1.3:58605299-58605318 | None:intergenic | 25.0% |
| !! | AATTTCCCTTATGATCTTTT+TGG | - | chr1.3:58604184-58604203 | MS.gene44108:intron | 25.0% |
| !! | AGGTTCTAGTAAAACTATTT+GGG | - | chr1.3:58603680-58603699 | MS.gene44108:CDS | 25.0% |
| !! | CTAACTTTTAAACATATGCA+TGG | - | chr1.3:58604516-58604535 | MS.gene44108:intron | 25.0% |
| !! | CTTTTATTCTATTTTCCCAA+TGG | - | chr1.3:58604287-58604306 | MS.gene44108:intron | 25.0% |
| !! | GATTTATAGTTCTTCCATTT+TGG | - | chr1.3:58603798-58603817 | MS.gene44108:intron | 25.0% |
| !! | TAGGTTCTAGTAAAACTATT+TGG | - | chr1.3:58603679-58603698 | MS.gene44108:CDS | 25.0% |
| !! | TCAGATAAATTGCTATTGAT+TGG | + | chr1.3:58603044-58603063 | None:intergenic | 25.0% |
| !! | TCTAAAGAGCAATTTTCAAA+GGG | - | chr1.3:58601769-58601788 | MS.gene44108:intron | 25.0% |
| !! | TCTACATTACTTGTTGATTA+AGG | - | chr1.3:58605618-58605637 | MS.gene44108:intron | 25.0% |
| !! | TCTATACAATTGTGAGTTTT+CGG | + | chr1.3:58605935-58605954 | None:intergenic | 25.0% |
| !! | TTAGATAAATTAGGGACTTT+TGG | + | chr1.3:58604257-58604276 | None:intergenic | 25.0% |
| !! | TTTGTTGCATATATTTTGCT+TGG | - | chr1.3:58602353-58602372 | MS.gene44108:intron | 25.0% |
| !!! | ATTGTTTTGATGTTGTTTCA+AGG | - | chr1.3:58601259-58601278 | MS.gene44108:intron | 25.0% |
| !!! | CTCAAATAATTTTCTAGAAC+AGG | + | chr1.3:58600541-58600560 | None:intergenic | 25.0% |
| !!! | GGTTTTTTTTTAAGAAGTGT+TGG | - | chr1.3:58601616-58601635 | MS.gene44108:intron | 25.0% |
| !!! | TGCATTTATAGTCTTGTAAT+TGG | - | chr1.3:58602478-58602497 | MS.gene44108:intron | 25.0% |
| !!! | TTTGTTTTCTCATATTGCTT+GGG | - | chr1.3:58601079-58601098 | MS.gene44108:intron | 25.0% |
| AAAAGAAAGTAGCTTAACCT+TGG | - | chr1.3:58602862-58602881 | MS.gene44108:intron | 30.0% | |
| AAACAAAGAGATTTAGCATC+GGG | + | chr1.3:58604396-58604415 | None:intergenic | 30.0% | |
| AAAGAGAGGATACCAAATAA+AGG | + | chr1.3:58604132-58604151 | None:intergenic | 30.0% | |
| AAAGTTAGGAAACCAATCAT+TGG | + | chr1.3:58604504-58604523 | None:intergenic | 30.0% | |
| AACTGAACAATTGGCAAAAA+TGG | - | chr1.3:58603437-58603456 | MS.gene44108:intron | 30.0% | |
| AAGCATCAATGATAGCTAAA+AGG | + | chr1.3:58603761-58603780 | None:intergenic | 30.0% | |
| AATATATGCAACAAACCAAG+GGG | + | chr1.3:58602348-58602367 | None:intergenic | 30.0% | |
| AATCAACAAGTAATGTAGAG+AGG | + | chr1.3:58605617-58605636 | None:intergenic | 30.0% | |
| AATGTGGAACTGATAGTAAT+GGG | - | chr1.3:58604662-58604681 | MS.gene44108:intron | 30.0% | |
| AGACTTCCAAAATTTCTCTA+GGG | + | chr1.3:58601752-58601771 | None:intergenic | 30.0% | |
| ATGCTATCAAAACGAATCAA+AGG | + | chr1.3:58600737-58600756 | None:intergenic | 30.0% | |
| CAAATTGGAAAATGTCCTTA+CGG | - | chr1.3:58605999-58606018 | MS.gene44108:intron | 30.0% | |
| CAGAACCATATATGTTACAT+GGG | - | chr1.3:58602238-58602257 | MS.gene44108:intron | 30.0% | |
| CTAAATGCTATCTAAGAATG+AGG | + | chr1.3:58603948-58603967 | None:intergenic | 30.0% | |
| CTCATGTAAATAGTGTAATG+AGG | + | chr1.3:58603178-58603197 | None:intergenic | 30.0% | |
| CTCATTACACTATTTACATG+AGG | - | chr1.3:58603176-58603195 | MS.gene44108:intron | 30.0% | |
| CTCATTCTTAGATAGCATTT+AGG | - | chr1.3:58603946-58603965 | MS.gene44108:intron | 30.0% | |
| GAAAAATGGTATTCTGATCA+AGG | + | chr1.3:58601022-58601041 | None:intergenic | 30.0% | |
| GAAACAAAGAGATTTAGCAT+CGG | + | chr1.3:58604397-58604416 | None:intergenic | 30.0% | |
| GAAAGCCAAAAAGATCATAA+GGG | + | chr1.3:58604192-58604211 | None:intergenic | 30.0% | |
| GAGAGATACTAAAATTATCC+AGG | + | chr1.3:58605579-58605598 | None:intergenic | 30.0% | |
| GATACATTAATAACTGTGAG+AGG | + | chr1.3:58602006-58602025 | None:intergenic | 30.0% | |
| GCACAATATCAAACATTTCA+TGG | - | chr1.3:58602054-58602073 | MS.gene44108:intron | 30.0% | |
| GTAGTCAAGCTATAAATAAG+GGG | - | chr1.3:58604017-58604036 | MS.gene44108:intron | 30.0% | |
| GTCTAAACAAAAAAGAGACT+TGG | + | chr1.3:58605259-58605278 | None:intergenic | 30.0% | |
| TAAATAGTGTAATGAGGGAA+GGG | + | chr1.3:58603172-58603191 | None:intergenic | 30.0% | |
| TAATTTGAACACATCACCTA+TGG | + | chr1.3:58606315-58606334 | None:intergenic | 30.0% | |
| TACATGCAATGTTTGTATCT+TGG | - | chr1.3:58601515-58601534 | MS.gene44108:CDS | 30.0% | |
| TAGACTTCCAAAATTTCTCT+AGG | + | chr1.3:58601753-58601772 | None:intergenic | 30.0% | |
| TATAGGACAGAAATAACTAC+TGG | + | chr1.3:58604217-58604236 | None:intergenic | 30.0% | |
| TATTAATGTCACTAGACACA+TGG | - | chr1.3:58602293-58602312 | MS.gene44108:intron | 30.0% | |
| TCCTATATTTGACATTGCAT+AGG | - | chr1.3:58604230-58604249 | MS.gene44108:intron | 30.0% | |
| TCCTATGCAATGTCAAATAT+AGG | + | chr1.3:58604234-58604253 | None:intergenic | 30.0% | |
| TCTCTATTAACACCAATGAT+TGG | - | chr1.3:58604489-58604508 | MS.gene44108:intron | 30.0% | |
| TGAAAGCCAAAAAGATCATA+AGG | + | chr1.3:58604193-58604212 | None:intergenic | 30.0% | |
| TGCATGTAAAGCAATAGAAA+AGG | + | chr1.3:58601503-58601522 | None:intergenic | 30.0% | |
| TGGAAACATTGAAAAGACAA+AGG | + | chr1.3:58603024-58603043 | None:intergenic | 30.0% | |
| TTAATGATGCATTCACATTC+TGG | - | chr1.3:58601980-58601999 | MS.gene44108:CDS | 30.0% | |
| TTATACTTCCAACGTGTTTA+AGG | - | chr1.3:58606024-58606043 | MS.gene44108:intron | 30.0% | |
| TTGGCAAAAATGGTTGAAAA+AGG | - | chr1.3:58603447-58603466 | MS.gene44108:intron | 30.0% | |
| TTGTTGTGGTTTACAACAAA+TGG | - | chr1.3:58601547-58601566 | MS.gene44108:intron | 30.0% | |
| ! | AATGGTTTGGAACTAATGTA+CGG | - | chr1.3:58605017-58605036 | MS.gene44108:intron | 30.0% |
| ! | AATGTACGGAGTTAATTTTC+AGG | - | chr1.3:58605031-58605050 | MS.gene44108:intron | 30.0% |
| ! | ATATATTGTTGTTCTTGCTC+AGG | + | chr1.3:58606182-58606201 | None:intergenic | 30.0% |
| ! | CTATACAATTGTGAGTTTTC+GGG | + | chr1.3:58605934-58605953 | None:intergenic | 30.0% |
| ! | GCATTGAATTTGAGACAAAT+TGG | - | chr1.3:58605984-58606003 | MS.gene44108:intron | 30.0% |
| ! | GCTAAAAGGTACATATTTCA+AGG | + | chr1.3:58603747-58603766 | None:intergenic | 30.0% |
| ! | GTCTAAAGAGCAATTTTCAA+AGG | - | chr1.3:58601768-58601787 | MS.gene44108:intron | 30.0% |
| ! | TATTTTCCTTTCCTCATTGT+AGG | - | chr1.3:58604151-58604170 | MS.gene44108:intron | 30.0% |
| ! | TGCATATATTTTGCTTGGAA+AGG | - | chr1.3:58602358-58602377 | MS.gene44108:intron | 30.0% |
| ! | TTATTGGCTATGCGTATAAA+TGG | - | chr1.3:58604999-58605018 | MS.gene44108:intron | 30.0% |
| ! | TTGTTTTCTCATATTGCTTG+GGG | - | chr1.3:58601080-58601099 | MS.gene44108:intron | 30.0% |
| !! | AATATTTTCAAGCTGCAGAT+GGG | + | chr1.3:58602277-58602296 | None:intergenic | 30.0% |
| !! | GAATACCATTTTTCTCTCTT+CGG | - | chr1.3:58601028-58601047 | MS.gene44108:CDS | 30.0% |
| !! | GCAATTTATCTGATTTTTGG+TGG | - | chr1.3:58603051-58603070 | MS.gene44108:intron | 30.0% |
| !! | GGATAATTTTAGTATCTCTC+AGG | - | chr1.3:58605579-58605598 | MS.gene44108:intron | 30.0% |
| !! | GTTTGTTTTCTCATATTGCT+TGG | - | chr1.3:58601078-58601097 | MS.gene44108:intron | 30.0% |
| !! | TAATATTTTCAAGCTGCAGA+TGG | + | chr1.3:58602278-58602297 | None:intergenic | 30.0% |
| !! | TATTTTTGTGTATGCACAGA+TGG | - | chr1.3:58600805-58600824 | MS.gene44108:intron | 30.0% |
| !!! | TTATTTTTAATCTGCAGGCT+AGG | - | chr1.3:58604823-58604842 | MS.gene44108:intron | 30.0% |
| !!! | TTTTAACTTCACATGGACTT+AGG | + | chr1.3:58603504-58603523 | None:intergenic | 30.0% |
| AAACAACTTGAAATCCAGTC+GGG | + | chr1.3:58600866-58600885 | None:intergenic | 35.0% | |
| AACAAGTGAGGAATGGAAAA+AGG | + | chr1.3:58600345-58600364 | None:intergenic | 35.0% | |
| AAGCGTTTCAAGAACGATTA+TGG | - | chr1.3:58605061-58605080 | MS.gene44108:intron | 35.0% | |
| AAGTCCTTCATCAGTAAAAG+TGG | + | chr1.3:58604599-58604618 | None:intergenic | 35.0% | |
| AGAAACATACTTTAGCAGCA+TGG | - | chr1.3:58604620-58604639 | MS.gene44108:intron | 35.0% | |
| AGAGGATACCAAATAAAGGA+TGG | + | chr1.3:58604128-58604147 | None:intergenic | 35.0% | |
| AGTTAGCTCAATACCAATTG+TGG | - | chr1.3:58605388-58605407 | MS.gene44108:intron | 35.0% | |
| ATACCAATTGTGGATGATTC+TGG | - | chr1.3:58605398-58605417 | MS.gene44108:intron | 35.0% | |
| ATATATGCAACAAACCAAGG+GGG | + | chr1.3:58602347-58602366 | None:intergenic | 35.0% | |
| ATCAATCAATGGAGTGATCA+AGG | + | chr1.3:58603996-58604015 | None:intergenic | 35.0% | |
| ATGTCTTCTAGTCTCTCAAA+AGG | + | chr1.3:58604849-58604868 | None:intergenic | 35.0% | |
| ATTAGCATTGTTAGGCCTTA+CGG | + | chr1.3:58605878-58605897 | None:intergenic | 35.0% | |
| ATTGAAAAGACAAAGGAGAG+AGG | + | chr1.3:58603017-58603036 | None:intergenic | 35.0% | |
| CAAACAACTTGAAATCCAGT+CGG | + | chr1.3:58600867-58600886 | None:intergenic | 35.0% | |
| CAATGTGGAACTGATAGTAA+TGG | - | chr1.3:58604661-58604680 | MS.gene44108:intron | 35.0% | |
| CTAGATGTGAAATGTATGCT+AGG | - | chr1.3:58605548-58605567 | MS.gene44108:intron | 35.0% | |
| CTTACATCAACAAAACTCCA+AGG | + | chr1.3:58604697-58604716 | None:intergenic | 35.0% | |
| GAATGCATAATAGCAACTAC+TGG | + | chr1.3:58604900-58604919 | None:intergenic | 35.0% | |
| GACTTCCAAAATTTCTCTAG+GGG | + | chr1.3:58601751-58601770 | None:intergenic | 35.0% | |
| GAGAGAAAATTACAGCAATG+TGG | - | chr1.3:58604646-58604665 | MS.gene44108:intron | 35.0% | |
| GAGGAAAGGAAAATAAAGAG+AGG | + | chr1.3:58604146-58604165 | None:intergenic | 35.0% | |
| GAGGATACCAAATAAAGGAT+GGG | + | chr1.3:58604127-58604146 | None:intergenic | 35.0% | |
| GCAGAACCATATATGTTACA+TGG | - | chr1.3:58602237-58602256 | MS.gene44108:intron | 35.0% | |
| GCTTGACTACAATCAATCAA+TGG | + | chr1.3:58604007-58604026 | None:intergenic | 35.0% | |
| GTAAATAGTGTAATGAGGGA+AGG | + | chr1.3:58603173-58603192 | None:intergenic | 35.0% | |
| GTGTAATGAAAGAGCTGAAA+AGG | - | chr1.3:58601281-58601300 | MS.gene44108:intron | 35.0% | |
| TAACATACATTGCATGTGCA+TGG | + | chr1.3:58603231-58603250 | None:intergenic | 35.0% | |
| TATTATGCATTCTTCTTCCG+AGG | - | chr1.3:58604908-58604927 | MS.gene44108:intron | 35.0% | |
| TGAGTTGTCGTTCTGATATA+AGG | - | chr1.3:58601643-58601662 | MS.gene44108:CDS | 35.0% | |
| TGGATTATTCAGCATGGTAT+TGG | - | chr1.3:58600563-58600582 | MS.gene44108:CDS | 35.0% | |
| TGTGGTTTACAACAAATGGA+TGG | - | chr1.3:58601551-58601570 | MS.gene44108:intron | 35.0% | |
| TTACCAATGTCTCGAATTGA+AGG | - | chr1.3:58600837-58600856 | MS.gene44108:intron | 35.0% | |
| TTCAATACCTTTGGGTAGAT+GGG | - | chr1.3:58605114-58605133 | MS.gene44108:intron | 35.0% | |
| TTCAGTGCTTGAATAATGTC+CGG | + | chr1.3:58603378-58603397 | None:intergenic | 35.0% | |
| TTGAAAAGACAAAGGAGAGA+GGG | + | chr1.3:58603016-58603035 | None:intergenic | 35.0% | |
| ! | AACTGTTGTTGGGAGTATAA+AGG | - | chr1.3:58601713-58601732 | MS.gene44108:CDS | 35.0% |
| ! | CTTGGTCATTTCATTTGTTG+TGG | - | chr1.3:58601533-58601552 | MS.gene44108:CDS | 35.0% |
| ! | GAAAAGGAAGTTGTTTCAAG+AGG | - | chr1.3:58601297-58601316 | MS.gene44108:intron | 35.0% |
| ! | GGTGTTAATAGAGATTAGCT+TGG | + | chr1.3:58604483-58604502 | None:intergenic | 35.0% |
| ! | TGAGTATGGATTATTCAGCA+TGG | - | chr1.3:58600557-58600576 | MS.gene44108:CDS | 35.0% |
| ! | TGTTTTCTCATATTGCTTGG+GGG | - | chr1.3:58601081-58601100 | MS.gene44108:intron | 35.0% |
| !! | ATGCTTTCAGGAAGTATCTT+TGG | - | chr1.3:58603302-58603321 | MS.gene44108:intron | 35.0% |
| !! | CATTATTCAAGCACTGAAAG+AGG | - | chr1.3:58603380-58603399 | MS.gene44108:intron | 35.0% |
| !!! | AATGGTGTGTTATTTTCTCC+AGG | - | chr1.3:58602442-58602461 | MS.gene44108:intron | 35.0% |
| AATGTATGCTAGGATAAGCC+TGG | - | chr1.3:58605558-58605577 | MS.gene44108:intron | 40.0% | |
| ACAAACCATGGCATTTGTGA+AGG | + | chr1.3:58604338-58604357 | None:intergenic | 40.0% | |
| AGCAGCAGCCATTTATAAAC+GGG | - | chr1.3:58602184-58602203 | MS.gene44108:intron | 40.0% | |
| ATGGAAAAAGGTTGAGGATC+AGG | + | chr1.3:58600333-58600352 | None:intergenic | 40.0% | |
| ATGGAACGCTTTGCTAATTC+TGG | - | chr1.3:58606068-58606087 | MS.gene44108:intron | 40.0% | |
| CAAGAACCTACAATGAGGAA+AGG | + | chr1.3:58604160-58604179 | None:intergenic | 40.0% | |
| CCAAACAAACAAGTGAGGAA+TGG | + | chr1.3:58600352-58600371 | None:intergenic | 40.0% | |
| CCAAATACCGTATGAAATCC+TGG | + | chr1.3:58600900-58600919 | None:intergenic | 40.0% | |
| CCAATCGGTATTTGAAGAAC+CGG | + | chr1.3:58605094-58605113 | None:intergenic | 40.0% | |
| CCAGGATTTCATACGGTATT+TGG | - | chr1.3:58600897-58600916 | MS.gene44108:intron | 40.0% | |
| CCATTCCTCACTTGTTTGTT+TGG | - | chr1.3:58600349-58600368 | MS.gene44108:intron | 40.0% | |
| CGTTGCAATTGGCTGTTTAT+TGG | + | chr1.3:58605158-58605177 | None:intergenic | 40.0% | |
| CTTGACTCCAGGATTTCATA+CGG | - | chr1.3:58600890-58600909 | MS.gene44108:intron | 40.0% | |
| GAACCAGAATCATCCACAAT+TGG | + | chr1.3:58605404-58605423 | None:intergenic | 40.0% | |
| GAACGATTATGGTTCTTTGC+CGG | - | chr1.3:58605072-58605091 | MS.gene44108:intron | 40.0% | |
| GAAGAGGAAAGAAAGGGTAA+AGG | - | chr1.3:58601103-58601122 | MS.gene44108:intron | 40.0% | |
| GAGCAGCAGCCATTTATAAA+CGG | - | chr1.3:58602183-58602202 | MS.gene44108:intron | 40.0% | |
| GATCTCCGAAGAGAGAAAAA+TGG | + | chr1.3:58601036-58601055 | None:intergenic | 40.0% | |
| GCAGACAGTTAACTGTTGTT+GGG | - | chr1.3:58601703-58601722 | MS.gene44108:CDS | 40.0% | |
| GCTATCGCTCTAATGAATCA+AGG | - | chr1.3:58605205-58605224 | MS.gene44108:intron | 40.0% | |
| GGCATCCCATGTAACATATA+TGG | + | chr1.3:58602246-58602265 | None:intergenic | 40.0% | |
| GGCTATGCGTATAAATGGTT+TGG | - | chr1.3:58605004-58605023 | MS.gene44108:intron | 40.0% | |
| GGTTGTACCCATCCTTTATT+TGG | - | chr1.3:58604117-58604136 | MS.gene44108:intron | 40.0% | |
| GGTTTACAACAAATGGATGG+AGG | - | chr1.3:58601554-58601573 | MS.gene44108:intron | 40.0% | |
| GGTTTATAGGGAGGAAAGTT+TGG | - | chr1.3:58601595-58601614 | MS.gene44108:intron | 40.0% | |
| GTTCAATACCTTTGGGTAGA+TGG | - | chr1.3:58605113-58605132 | MS.gene44108:intron | 40.0% | |
| TACAACAAATGGATGGAGGT+TGG | - | chr1.3:58601558-58601577 | MS.gene44108:intron | 40.0% | |
| TACTGCTTCTCATTTGCTTC+CGG | - | chr1.3:58602970-58602989 | MS.gene44108:intron | 40.0% | |
| TCACAGTGATCTTACTGCAT+TGG | - | chr1.3:58605525-58605544 | MS.gene44108:intron | 40.0% | |
| TCCAGTGACAAAACAAACCA+TGG | + | chr1.3:58604350-58604369 | None:intergenic | 40.0% | |
| TGAAAAGACAAAGGAGAGAG+GGG | + | chr1.3:58603015-58603034 | None:intergenic | 40.0% | |
| TGAGGAATGGAAAAAGGTTG+AGG | + | chr1.3:58600339-58600358 | None:intergenic | 40.0% | |
| TGATGCAAGAACCTACAATG+AGG | + | chr1.3:58604165-58604184 | None:intergenic | 40.0% | |
| TGTCCTGCTTTATATTGGCA+GGG | - | chr1.3:58601341-58601360 | MS.gene44108:intron | 40.0% | |
| TGTCTCAAATTCAATGCCTG+CGG | + | chr1.3:58605981-58606000 | None:intergenic | 40.0% | |
| TGTTGTTCTTGCTCAGGTAA+AGG | + | chr1.3:58606176-58606195 | None:intergenic | 40.0% | |
| TTCTATGCGGTTCTTTCACT+GGG | - | chr1.3:58600394-58600413 | MS.gene44108:intron | 40.0% | |
| TTTCTATGCGGTTCTTTCAC+TGG | - | chr1.3:58600393-58600412 | MS.gene44108:intron | 40.0% | |
| ! | ACCGATTGGTTCAATACCTT+TGG | - | chr1.3:58605105-58605124 | MS.gene44108:intron | 40.0% |
| ! | AGGATCCCCTAGAGAAATTT+TGG | - | chr1.3:58601743-58601762 | MS.gene44108:CDS | 40.0% |
| ! | CCGATTGGTTCAATACCTTT+GGG | - | chr1.3:58605106-58605125 | MS.gene44108:intron | 40.0% |
| ! | CTTGCTGTCCTGCTTTATAT+TGG | - | chr1.3:58601336-58601355 | MS.gene44108:intron | 40.0% |
| ! | GGGAGTATAAAGGTCATTTC+AGG | - | chr1.3:58601723-58601742 | MS.gene44108:CDS | 40.0% |
| ! | GTAATGGGAAAGCATATCCT+TGG | - | chr1.3:58604677-58604696 | MS.gene44108:intron | 40.0% |
| ! | GTTGGAAGTATAAGTCCGTA+AGG | + | chr1.3:58606017-58606036 | None:intergenic | 40.0% |
| ! | TCTAGGAAGTGCAAGTTTGT+TGG | - | chr1.3:58603339-58603358 | MS.gene44108:intron | 40.0% |
| ! | TTAACCTTGGAGCTTTTCCA+GGG | - | chr1.3:58602875-58602894 | MS.gene44108:intron | 40.0% |
| ! | TTATTGGATTCCCCCACTTT+TGG | + | chr1.3:58605142-58605161 | None:intergenic | 40.0% |
| ! | TTTTCCAGGGAGTTTTTCCT+AGG | - | chr1.3:58602888-58602907 | MS.gene44108:intron | 40.0% |
| !! | CAGTATCAGTTTTGTGTGGA+TGG | - | chr1.3:58602144-58602163 | MS.gene44108:intron | 40.0% |
| !! | CCCAAAGGTATTGAACCAAT+CGG | + | chr1.3:58605109-58605128 | None:intergenic | 40.0% |
| !! | CGATCCACTTTTACTGATGA+AGG | - | chr1.3:58604592-58604611 | MS.gene44108:intron | 40.0% |
| !! | TGGACGGAGATTGGTTTATA+GGG | - | chr1.3:58601583-58601602 | MS.gene44108:intron | 40.0% |
| !! | TGTGCAGTATCAGTTTTGTG+TGG | - | chr1.3:58602140-58602159 | MS.gene44108:intron | 40.0% |
| !! | TTGGACGGAGATTGGTTTAT+AGG | - | chr1.3:58601582-58601601 | MS.gene44108:intron | 40.0% |
| !!! | ATGAAGTTTTTTTGTGCCGC+AGG | - | chr1.3:58605962-58605981 | MS.gene44108:intron | 40.0% |
| !!! | GCTGTCACTTTGTTTCCTTT+TGG | - | chr1.3:58600600-58600619 | MS.gene44108:CDS | 40.0% |
| AAAGGTTGAGGATCAGGTAC+TGG | + | chr1.3:58600327-58600346 | None:intergenic | 45.0% | |
| AAAGTGGATCGATGACTCTC+CGG | + | chr1.3:58604583-58604602 | None:intergenic | 45.0% | |
| AACAGCCAATTGCAACGCTA+AGG | - | chr1.3:58605161-58605180 | MS.gene44108:intron | 45.0% | |
| ATGCATGCACATATGCTACC+TGG | + | chr1.3:58602463-58602482 | None:intergenic | 45.0% | |
| ATGCATTCTTCTTCCGAGGA+CGG | - | chr1.3:58604912-58604931 | MS.gene44108:intron | 45.0% | |
| CACAGTGAACACTATTTCGG+TGG | - | chr1.3:58602215-58602234 | MS.gene44108:intron | 45.0% | |
| CACCGAAATAGTGTTCACTG+TGG | + | chr1.3:58602217-58602236 | None:intergenic | 45.0% | |
| CACTTGTTTGTTTGGCCTCA+TGG | - | chr1.3:58600357-58600376 | MS.gene44108:intron | 45.0% | |
| CATCACCACATGCAATGGAT+CGG | + | chr1.3:58606051-58606070 | None:intergenic | 45.0% | |
| CCGGTTCTTCAAATACCGAT+TGG | - | chr1.3:58605091-58605110 | MS.gene44108:intron | 45.0% | |
| CGAAATAGTGTTCACTGTGG+CGG | + | chr1.3:58602214-58602233 | None:intergenic | 45.0% | |
| CGCCACAGTGAACACTATTT+CGG | - | chr1.3:58602212-58602231 | MS.gene44108:intron | 45.0% | |
| CTCTCTTCGGAGATCATAGA+GGG | - | chr1.3:58601041-58601060 | MS.gene44108:CDS | 45.0% | |
| CTGTCCTGCTTTATATTGGC+AGG | - | chr1.3:58601340-58601359 | MS.gene44108:intron | 45.0% | |
| CTTTATATTGGCAGGGCAGT+AGG | - | chr1.3:58601348-58601367 | MS.gene44108:intron | 45.0% | |
| GAAAGAACCGCATAGAAACG+CGG | + | chr1.3:58600391-58600410 | None:intergenic | 45.0% | |
| GAAGTCATATGTAGCAGCTG+AGG | + | chr1.3:58604945-58604964 | None:intergenic | 45.0% | |
| GAGTGATCAAGGATCTACTC+AGG | + | chr1.3:58603985-58604004 | None:intergenic | 45.0% | |
| GCGGTGAACCCGTTTATAAA+TGG | + | chr1.3:58602195-58602214 | None:intergenic | 45.0% | |
| GGCAGACAGTTAACTGTTGT+TGG | - | chr1.3:58601702-58601721 | MS.gene44108:CDS | 45.0% | |
| GTCTAGCTGTTCTTAGCACA+AGG | + | chr1.3:58605471-58605490 | None:intergenic | 45.0% | |
| GTGCAAGGGATCATTTCCAT+AGG | - | chr1.3:58606296-58606315 | MS.gene44108:CDS | 45.0% | |
| TAGCTGTTCTTAGCACAAGG+AGG | + | chr1.3:58605468-58605487 | None:intergenic | 45.0% | |
| TATCAAACCTTGCCAGACTC+CGG | + | chr1.3:58602992-58603011 | None:intergenic | 45.0% | |
| TCTCTCTTCGGAGATCATAG+AGG | - | chr1.3:58601040-58601059 | MS.gene44108:CDS | 45.0% | |
| TCTCTTCGGAGATCATAGAG+GGG | - | chr1.3:58601042-58601061 | MS.gene44108:CDS | 45.0% | |
| TGAGGCCAAACAAACAAGTG+AGG | + | chr1.3:58600357-58600376 | None:intergenic | 45.0% | |
| TTGGGGGAAGAGGAAAGAAA+GGG | - | chr1.3:58601097-58601116 | MS.gene44108:intron | 45.0% | |
| TTGTTTGTTTGGCCTCATGG+AGG | - | chr1.3:58600360-58600379 | MS.gene44108:intron | 45.0% | |
| ! | AAGTATCTTTGGCTCCTGTG+TGG | - | chr1.3:58603313-58603332 | MS.gene44108:intron | 45.0% |
| ! | AGTATCTTTGGCTCCTGTGT+GGG | - | chr1.3:58603314-58603333 | MS.gene44108:intron | 45.0% |
| ! | CAAATGGATGGAGGTTGGTT+TGG | - | chr1.3:58601563-58601582 | MS.gene44108:intron | 45.0% |
| ! | CTTAACCTTGGAGCTTTTCC+AGG | - | chr1.3:58602874-58602893 | MS.gene44108:intron | 45.0% |
| ! | CTTAAGTGCCACTAGTGTGA+CGG | - | chr1.3:58601681-58601700 | MS.gene44108:CDS | 45.0% |
| ! | GTTGTTTGCTACTTGACTCC+AGG | - | chr1.3:58600879-58600898 | MS.gene44108:intron | 45.0% |
| !! | ACGGAGATTGGTTTATAGGG+AGG | - | chr1.3:58601586-58601605 | MS.gene44108:intron | 45.0% |
| !! | AGTTTTGTGTGGATGGTGTG+TGG | - | chr1.3:58602151-58602170 | MS.gene44108:intron | 45.0% |
| !! | GCAGCACTAAGAGAAGCATT+TGG | + | chr1.3:58605187-58605206 | None:intergenic | 45.0% |
| !! | TACAGGTGTTGGAGAAGTTG+TGG | - | chr1.3:58606250-58606269 | MS.gene44108:CDS | 45.0% |
| !! | TTTGGCCTTAGCGTTGCAAT+TGG | + | chr1.3:58605169-58605188 | None:intergenic | 45.0% |
| !!! | GCCATGGTTTGTTTTGTCAC+TGG | - | chr1.3:58604346-58604365 | MS.gene44108:CDS | 45.0% |
| !!! | AACATTTTAAAAAAATTAAT+CGG | - | chr1.3:58602602-58602621 | MS.gene44108:intron | 5.0% |
| AACTCCCTGGAAAAGCTCCA+AGG | + | chr1.3:58602882-58602901 | None:intergenic | 50.0% | |
| AAGGTCCGATCCATTGCATG+TGG | - | chr1.3:58606043-58606062 | MS.gene44108:intron | 50.0% | |
| ACCAGAAACACCATCAGCAG+AGG | + | chr1.3:58604315-58604334 | None:intergenic | 50.0% | |
| AGAGCAAACTCTGGTGTCCT+AGG | + | chr1.3:58602908-58602927 | None:intergenic | 50.0% | |
| AGCTGCAGATGGGATCTACT+AGG | + | chr1.3:58602267-58602286 | None:intergenic | 50.0% | |
| ATGTCAGGTTCATCAGCTGC+AGG | - | chr1.3:58600270-58600289 | MS.gene44108:CDS | 50.0% | |
| CAACTTGAAATCCAGTCGGG+CGG | + | chr1.3:58600863-58600882 | None:intergenic | 50.0% | |
| CACTTCCTAGAATCCCACAC+AGG | + | chr1.3:58603330-58603349 | None:intergenic | 50.0% | |
| CGATCCATTGCATGTGGTGA+TGG | - | chr1.3:58606049-58606068 | MS.gene44108:intron | 50.0% | |
| CGGCCTTCAATTCGAGACAT+TGG | + | chr1.3:58600843-58600862 | None:intergenic | 50.0% | |
| CGTTCCATCACCACATGCAA+TGG | + | chr1.3:58606056-58606075 | None:intergenic | 50.0% | |
| CTCATATTGCTTGGGGGAAG+AGG | - | chr1.3:58601087-58601106 | MS.gene44108:intron | 50.0% | |
| CTGCCCTGCCAATATAAAGC+AGG | + | chr1.3:58601347-58601366 | None:intergenic | 50.0% | |
| CTGGTCCTTCACAAATGCCA+TGG | - | chr1.3:58604330-58604349 | MS.gene44108:CDS | 50.0% | |
| CTTGGGGGAAGAGGAAAGAA+AGG | - | chr1.3:58601096-58601115 | MS.gene44108:intron | 50.0% | |
| GAGACATGCAGAGCAAACTC+TGG | + | chr1.3:58602917-58602936 | None:intergenic | 50.0% | |
| GGATCGGACCTTAAACACGT+TGG | + | chr1.3:58606035-58606054 | None:intergenic | 50.0% | |
| GGTGAAACCGCGTTTCTATG+CGG | - | chr1.3:58600381-58600400 | MS.gene44108:intron | 50.0% | |
| GTGTCCTAGGAAAAACTCCC+TGG | + | chr1.3:58602895-58602914 | None:intergenic | 50.0% | |
| TCGGAGATCATAGAGGGGAT+GGG | - | chr1.3:58601047-58601066 | MS.gene44108:CDS | 50.0% | |
| TCTCATTTGCTTCCGGAGTC+TGG | - | chr1.3:58602977-58602996 | MS.gene44108:intron | 50.0% | |
| TTCGGAGATCATAGAGGGGA+TGG | - | chr1.3:58601046-58601065 | MS.gene44108:CDS | 50.0% | |
| TTTGTGTGGATGGTGTGTGG+CGG | - | chr1.3:58602154-58602173 | MS.gene44108:intron | 50.0% | |
| ! | ACAAACCAAGGGGGCATAGA+TGG | + | chr1.3:58602338-58602357 | None:intergenic | 50.0% |
| ! | AGAGATTTAGCATCGGGTGC+AGG | + | chr1.3:58604390-58604409 | None:intergenic | 50.0% |
| ! | CAAACCAAGGGGGCATAGAT+GGG | + | chr1.3:58602337-58602356 | None:intergenic | 50.0% |
| ! | TGTTGGAGTGCTTAGTGCAC+CGG | - | chr1.3:58603356-58603375 | MS.gene44108:intron | 50.0% |
| !! | AGCATCGGGTGCAGGTTTTA+TGG | + | chr1.3:58604382-58604401 | None:intergenic | 50.0% |
| !! | AGGTGTTGGAGAAGTTGTGG+TGG | - | chr1.3:58606253-58606272 | MS.gene44108:CDS | 50.0% |
| !! | AGGTTGGTTTGGACGGAGAT+TGG | - | chr1.3:58601574-58601593 | MS.gene44108:intron | 50.0% |
| !! | TGGATGGAGGTTGGTTTGGA+CGG | - | chr1.3:58601567-58601586 | MS.gene44108:intron | 50.0% |
| AACGCGGTTTCACCTCCATG+AGG | + | chr1.3:58600375-58600394 | None:intergenic | 55.0% | |
| ACTGTCTGCCGTCACACTAG+TGG | + | chr1.3:58601692-58601711 | None:intergenic | 55.0% | |
| ACTTCCCATCTATGCCCCCT+TGG | - | chr1.3:58602330-58602349 | MS.gene44108:intron | 55.0% | |
| GCTGCAGGTAGAGGAGGAAA+TGG | - | chr1.3:58600285-58600304 | MS.gene44108:CDS | 55.0% | |
| GGTAGATGGGCGCCAAAAGT+GGG | - | chr1.3:58605127-58605146 | MS.gene44108:intron | 55.0% | |
| GGTTCATCAGCTGCAGGTAG+AGG | - | chr1.3:58600276-58600295 | MS.gene44108:CDS | 55.0% | |
| GTAGATGGGCGCCAAAAGTG+GGG | - | chr1.3:58605128-58605147 | MS.gene44108:intron | 55.0% | |
| TAGATGGGCGCCAAAAGTGG+GGG | - | chr1.3:58605129-58605148 | MS.gene44108:intron | 55.0% | |
| TCATCAGCTGCAGGTAGAGG+AGG | - | chr1.3:58600279-58600298 | MS.gene44108:CDS | 55.0% | |
| TGGCTCCTGTGTGGGATTCT+AGG | - | chr1.3:58603322-58603341 | MS.gene44108:intron | 55.0% | |
| TTTGCTTCCGGAGTCTGGCA+AGG | - | chr1.3:58602982-58603001 | MS.gene44108:intron | 55.0% | |
| TTTGGCGCCCATCTACCCAA+AGG | + | chr1.3:58605124-58605143 | None:intergenic | 55.0% | |
| ! | GCCTCTGCTGATGGTGTTTC+TGG | - | chr1.3:58604311-58604330 | MS.gene44108:CDS | 55.0% |
| !! | ACCATCAGCAGAGGCACCAT+TGG | + | chr1.3:58604306-58604325 | None:intergenic | 55.0% |
| !! | CCATCAGCAGAGGCACCATT+GGG | + | chr1.3:58604305-58604324 | None:intergenic | 55.0% |
| CCCAATGGTGCCTCTGCTGA+TGG | - | chr1.3:58604302-58604321 | MS.gene44108:CDS | 60.0% | |
| CTGAGGAGTTGAGCCGTCCT+CGG | + | chr1.3:58604928-58604947 | None:intergenic | 60.0% | |
| GATCCCTTGCACACTCCTGC+AGG | + | chr1.3:58606288-58606307 | None:intergenic | 60.0% | |
| GGGTAGATGGGCGCCAAAAG+TGG | - | chr1.3:58605126-58605145 | MS.gene44108:intron | 60.0% | |
| ! | CTGCCTGCAGGAGTGTGCAA+GGG | - | chr1.3:58606282-58606301 | MS.gene44108:CDS | 60.0% |
| ! | TCTGCCTGCAGGAGTGTGCA+AGG | - | chr1.3:58606281-58606300 | MS.gene44108:CDS | 60.0% |
| ! | TGGTGGTGAAGTCTGCCTGC+AGG | - | chr1.3:58606270-58606289 | MS.gene44108:CDS | 60.0% |
| CGAATTGAAGGCCGCCCGAC+TGG | - | chr1.3:58600849-58600868 | MS.gene44108:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 58600270 | 58606346 | 58600270 | ID=MS.gene44108 |
| chr1.3 | mRNA | 58600270 | 58606346 | 58600270 | ID=MS.gene44108.t1;Parent=MS.gene44108 |
| chr1.3 | exon | 58606201 | 58606346 | 58606201 | ID=MS.gene44108.t1.exon1;Parent=MS.gene44108.t1 |
| chr1.3 | CDS | 58606201 | 58606346 | 58606201 | ID=cds.MS.gene44108.t1;Parent=MS.gene44108.t1 |
| chr1.3 | exon | 58605705 | 58605792 | 58605705 | ID=MS.gene44108.t1.exon2;Parent=MS.gene44108.t1 |
| chr1.3 | CDS | 58605705 | 58605792 | 58605705 | ID=cds.MS.gene44108.t1;Parent=MS.gene44108.t1 |
| chr1.3 | exon | 58604302 | 58604469 | 58604302 | ID=MS.gene44108.t1.exon3;Parent=MS.gene44108.t1 |
| chr1.3 | CDS | 58604302 | 58604469 | 58604302 | ID=cds.MS.gene44108.t1;Parent=MS.gene44108.t1 |
| chr1.3 | exon | 58603613 | 58603720 | 58603613 | ID=MS.gene44108.t1.exon4;Parent=MS.gene44108.t1 |
| chr1.3 | CDS | 58603613 | 58603720 | 58603613 | ID=cds.MS.gene44108.t1;Parent=MS.gene44108.t1 |
| chr1.3 | exon | 58603457 | 58603516 | 58603457 | ID=MS.gene44108.t1.exon5;Parent=MS.gene44108.t1 |
| chr1.3 | CDS | 58603457 | 58603516 | 58603457 | ID=cds.MS.gene44108.t1;Parent=MS.gene44108.t1 |
| chr1.3 | exon | 58603215 | 58603304 | 58603215 | ID=MS.gene44108.t1.exon6;Parent=MS.gene44108.t1 |
| chr1.3 | CDS | 58603215 | 58603304 | 58603215 | ID=cds.MS.gene44108.t1;Parent=MS.gene44108.t1 |
| chr1.3 | exon | 58601905 | 58602036 | 58601905 | ID=MS.gene44108.t1.exon7;Parent=MS.gene44108.t1 |
| chr1.3 | CDS | 58601905 | 58602036 | 58601905 | ID=cds.MS.gene44108.t1;Parent=MS.gene44108.t1 |
| chr1.3 | exon | 58601632 | 58601776 | 58601632 | ID=MS.gene44108.t1.exon8;Parent=MS.gene44108.t1 |
| chr1.3 | CDS | 58601632 | 58601776 | 58601632 | ID=cds.MS.gene44108.t1;Parent=MS.gene44108.t1 |
| chr1.3 | exon | 58601390 | 58601563 | 58601390 | ID=MS.gene44108.t1.exon9;Parent=MS.gene44108.t1 |
| chr1.3 | CDS | 58601390 | 58601563 | 58601390 | ID=cds.MS.gene44108.t1;Parent=MS.gene44108.t1 |
| chr1.3 | exon | 58601169 | 58601232 | 58601169 | ID=MS.gene44108.t1.exon10;Parent=MS.gene44108.t1 |
| chr1.3 | CDS | 58601169 | 58601232 | 58601169 | ID=cds.MS.gene44108.t1;Parent=MS.gene44108.t1 |
| chr1.3 | exon | 58601016 | 58601085 | 58601016 | ID=MS.gene44108.t1.exon11;Parent=MS.gene44108.t1 |
| chr1.3 | CDS | 58601016 | 58601085 | 58601016 | ID=cds.MS.gene44108.t1;Parent=MS.gene44108.t1 |
| chr1.3 | exon | 58600527 | 58600632 | 58600527 | ID=MS.gene44108.t1.exon12;Parent=MS.gene44108.t1 |
| chr1.3 | CDS | 58600527 | 58600632 | 58600527 | ID=cds.MS.gene44108.t1;Parent=MS.gene44108.t1 |
| chr1.3 | exon | 58600270 | 58600361 | 58600270 | ID=MS.gene44108.t1.exon13;Parent=MS.gene44108.t1 |
| chr1.3 | CDS | 58600270 | 58600361 | 58600270 | ID=cds.MS.gene44108.t1;Parent=MS.gene44108.t1 |
| Gene Sequence |
| Protein sequence |
