Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29115.t1 | KEH34859.1 | 96.3 | 214 | 8 | 0 | 1 | 214 | 388 | 601 | 7.10E-109 | 403.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29115.t1 | B0S1F7 | 50.0 | 70 | 29 | 1 | 22 | 91 | 2 | 65 | 1.1e-09 | 65.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29115.t1 | I3S0W3 | 96.3 | 214 | 8 | 0 | 1 | 214 | 58 | 271 | 5.1e-109 | 403.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene29115 | 0.801182 | 1.02E-48 | -1.69E-46 |
| MS.gene049171 | MS.gene29115 | 0.851035 | 1.15E-60 | -1.69E-46 |
| MS.gene049217 | MS.gene29115 | 0.824902 | 6.27E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene29115 | 0.878076 | 3.76E-69 | -1.69E-46 |
| MS.gene049232 | MS.gene29115 | 0.860728 | 1.69E-63 | -1.69E-46 |
| MS.gene049285 | MS.gene29115 | 0.835043 | 2.11E-56 | -1.69E-46 |
| MS.gene049320 | MS.gene29115 | 0.835455 | 1.66E-56 | -1.69E-46 |
| MS.gene049356 | MS.gene29115 | 0.838973 | 2.09E-57 | -1.69E-46 |
| MS.gene049369 | MS.gene29115 | 0.842674 | 2.24E-58 | -1.69E-46 |
| MS.gene049396 | MS.gene29115 | 0.889626 | 2.05E-73 | -1.69E-46 |
| MS.gene049609 | MS.gene29115 | 0.879267 | 1.43E-69 | -1.69E-46 |
| MS.gene049633 | MS.gene29115 | 0.861492 | 9.87E-64 | -1.69E-46 |
| MS.gene049805 | MS.gene29115 | 0.857826 | 1.25E-62 | -1.69E-46 |
| MS.gene05010 | MS.gene29115 | 0.838924 | 2.15E-57 | -1.69E-46 |
| MS.gene050170 | MS.gene29115 | 0.858513 | 7.83E-63 | -1.69E-46 |
| MS.gene050216 | MS.gene29115 | 0.827222 | 1.76E-54 | -1.69E-46 |
| MS.gene050323 | MS.gene29115 | 0.875321 | 3.38E-68 | -1.69E-46 |
| MS.gene050380 | MS.gene29115 | -0.826381 | 2.80E-54 | -1.69E-46 |
| MS.gene050444 | MS.gene29115 | 0.813913 | 2.01E-51 | -1.69E-46 |
| MS.gene050496 | MS.gene29115 | 0.818605 | 1.80E-52 | -1.69E-46 |
| MS.gene050499 | MS.gene29115 | 0.822979 | 1.77E-53 | -1.69E-46 |
| MS.gene050502 | MS.gene29115 | 0.821156 | 4.69E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene29115 | 0.842527 | 2.45E-58 | -1.69E-46 |
| MS.gene050518 | MS.gene29115 | 0.801829 | 7.48E-49 | -1.69E-46 |
| MS.gene050538 | MS.gene29115 | 0.834781 | 2.46E-56 | -1.69E-46 |
| MS.gene050553 | MS.gene29115 | 0.811524 | 6.71E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene29115 | 0.817516 | 3.17E-52 | -1.69E-46 |
| MS.gene050593 | MS.gene29115 | 0.849655 | 2.81E-60 | -1.69E-46 |
| MS.gene050612 | MS.gene29115 | 0.819364 | 1.21E-52 | -1.69E-46 |
| MS.gene050662 | MS.gene29115 | 0.824532 | 7.67E-54 | -1.69E-46 |
| MS.gene050670 | MS.gene29115 | 0.81871 | 1.70E-52 | -1.69E-46 |
| MS.gene050675 | MS.gene29115 | 0.828938 | 6.81E-55 | -1.69E-46 |
| MS.gene050686 | MS.gene29115 | 0.8024 | 5.71E-49 | -1.69E-46 |
| MS.gene050690 | MS.gene29115 | 0.806119 | 9.60E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene29115 | 0.804052 | 2.60E-49 | -1.69E-46 |
| MS.gene050747 | MS.gene29115 | 0.887279 | 1.64E-72 | -1.69E-46 |
| MS.gene050772 | MS.gene29115 | 0.873834 | 1.08E-67 | -1.69E-46 |
| MS.gene050809 | MS.gene29115 | -0.805244 | 1.47E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene29115 | 0.894094 | 3.41E-75 | -1.69E-46 |
| MS.gene05081 | MS.gene29115 | 0.851279 | 9.84E-61 | -1.69E-46 |
| MS.gene050868 | MS.gene29115 | 0.893219 | 7.70E-75 | -1.69E-46 |
| MS.gene050871 | MS.gene29115 | 0.895316 | 1.08E-75 | -1.69E-46 |
| MS.gene050904 | MS.gene29115 | 0.811889 | 5.59E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene29115 | 0.877122 | 8.09E-69 | -1.69E-46 |
| MS.gene050986 | MS.gene29115 | 0.820283 | 7.44E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene29115 | 0.818213 | 2.20E-52 | -1.69E-46 |
| MS.gene051113 | MS.gene29115 | -0.805318 | 1.41E-49 | -1.69E-46 |
| MS.gene051167 | MS.gene29115 | -0.831958 | 1.24E-55 | -1.69E-46 |
| MS.gene051268 | MS.gene29115 | 0.854414 | 1.25E-61 | -1.69E-46 |
| MS.gene051360 | MS.gene29115 | 0.803131 | 4.04E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene29115 | 0.832998 | 6.86E-56 | -1.69E-46 |
| MS.gene051438 | MS.gene29115 | 0.844118 | 9.22E-59 | -1.69E-46 |
| MS.gene051509 | MS.gene29115 | 0.812277 | 4.60E-51 | -1.69E-46 |
| MS.gene051551 | MS.gene29115 | 0.820788 | 5.70E-53 | -1.69E-46 |
| MS.gene051666 | MS.gene29115 | 0.832369 | 9.83E-56 | -1.69E-46 |
| MS.gene051694 | MS.gene29115 | 0.808374 | 3.20E-50 | -1.69E-46 |
| MS.gene051734 | MS.gene29115 | 0.844351 | 7.98E-59 | -1.69E-46 |
| MS.gene051838 | MS.gene29115 | 0.915404 | 6.13E-85 | -1.69E-46 |
| MS.gene051858 | MS.gene29115 | 0.808837 | 2.55E-50 | -1.69E-46 |
| MS.gene051874 | MS.gene29115 | 0.873305 | 1.63E-67 | -1.69E-46 |
| MS.gene051941 | MS.gene29115 | 0.816945 | 4.26E-52 | -1.69E-46 |
| MS.gene052066 | MS.gene29115 | 0.804798 | 1.82E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene29115 | 0.885136 | 1.05E-71 | -1.69E-46 |
| MS.gene052346 | MS.gene29115 | 0.822032 | 2.94E-53 | -1.69E-46 |
| MS.gene052414 | MS.gene29115 | 0.852607 | 4.13E-61 | -1.69E-46 |
| MS.gene052421 | MS.gene29115 | 0.823216 | 1.56E-53 | -1.69E-46 |
| MS.gene052482 | MS.gene29115 | 0.816913 | 4.33E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene29115 | 0.823607 | 1.26E-53 | -1.69E-46 |
| MS.gene052501 | MS.gene29115 | 0.836304 | 1.01E-56 | -1.69E-46 |
| MS.gene052503 | MS.gene29115 | 0.869703 | 2.54E-66 | -1.69E-46 |
| MS.gene052504 | MS.gene29115 | 0.817585 | 3.06E-52 | -1.69E-46 |
| MS.gene052505 | MS.gene29115 | 0.828864 | 7.09E-55 | -1.69E-46 |
| MS.gene052506 | MS.gene29115 | 0.855222 | 7.29E-62 | -1.69E-46 |
| MS.gene052615 | MS.gene29115 | 0.845511 | 3.88E-59 | -1.69E-46 |
| MS.gene052820 | MS.gene29115 | 0.804352 | 2.25E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene29115 | 0.852296 | 5.07E-61 | -1.69E-46 |
| MS.gene052823 | MS.gene29115 | 0.865396 | 6.09E-65 | -1.69E-46 |
| MS.gene052825 | MS.gene29115 | 0.867167 | 1.67E-65 | -1.69E-46 |
| MS.gene052870 | MS.gene29115 | 0.825515 | 4.49E-54 | -1.69E-46 |
| MS.gene052872 | MS.gene29115 | 0.829456 | 5.10E-55 | -1.69E-46 |
| MS.gene052966 | MS.gene29115 | 0.887034 | 2.03E-72 | -1.69E-46 |
| MS.gene052982 | MS.gene29115 | 0.819257 | 1.28E-52 | -1.69E-46 |
| MS.gene052986 | MS.gene29115 | 0.817073 | 3.98E-52 | -1.69E-46 |
| MS.gene052987 | MS.gene29115 | 0.819396 | 1.19E-52 | -1.69E-46 |
| MS.gene053018 | MS.gene29115 | 0.810466 | 1.14E-50 | -1.69E-46 |
| MS.gene053103 | MS.gene29115 | 0.805336 | 1.40E-49 | -1.69E-46 |
| MS.gene053104 | MS.gene29115 | 0.825507 | 4.51E-54 | -1.69E-46 |
| MS.gene053117 | MS.gene29115 | 0.824351 | 8.46E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene29115 | 0.87086 | 1.06E-66 | -1.69E-46 |
| MS.gene053207 | MS.gene29115 | 0.864144 | 1.50E-64 | -1.69E-46 |
| MS.gene053213 | MS.gene29115 | 0.839706 | 1.35E-57 | -1.69E-46 |
| MS.gene053286 | MS.gene29115 | 0.836814 | 7.51E-57 | -1.69E-46 |
| MS.gene053318 | MS.gene29115 | 0.817264 | 3.61E-52 | -1.69E-46 |
| MS.gene053420 | MS.gene29115 | -0.801982 | 6.96E-49 | -1.69E-46 |
| MS.gene053421 | MS.gene29115 | -0.804762 | 1.85E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene29115 | 0.840154 | 1.03E-57 | -1.69E-46 |
| MS.gene053449 | MS.gene29115 | 0.851654 | 7.71E-61 | -1.69E-46 |
| MS.gene053479 | MS.gene29115 | 0.853296 | 2.62E-61 | -1.69E-46 |
| MS.gene053480 | MS.gene29115 | 0.842151 | 3.08E-58 | -1.69E-46 |
| MS.gene053505 | MS.gene29115 | 0.830266 | 3.23E-55 | -1.69E-46 |
| MS.gene053562 | MS.gene29115 | -0.815716 | 8.02E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene29115 | 0.891438 | 3.97E-74 | -1.69E-46 |
| MS.gene053626 | MS.gene29115 | 0.891968 | 2.45E-74 | -1.69E-46 |
| MS.gene053632 | MS.gene29115 | 0.855996 | 4.33E-62 | -1.69E-46 |
| MS.gene053633 | MS.gene29115 | 0.835088 | 2.06E-56 | -1.69E-46 |
| MS.gene053824 | MS.gene29115 | 0.882637 | 8.81E-71 | -1.69E-46 |
| MS.gene053912 | MS.gene29115 | 0.869873 | 2.23E-66 | -1.69E-46 |
| MS.gene053916 | MS.gene29115 | 0.861879 | 7.52E-64 | -1.69E-46 |
| MS.gene054003 | MS.gene29115 | 0.892396 | 1.65E-74 | -1.69E-46 |
| MS.gene054408 | MS.gene29115 | 0.837446 | 5.17E-57 | -1.69E-46 |
| MS.gene054595 | MS.gene29115 | 0.881098 | 3.18E-70 | -1.69E-46 |
| MS.gene054600 | MS.gene29115 | 0.852365 | 4.84E-61 | -1.69E-46 |
| MS.gene054642 | MS.gene29115 | 0.832125 | 1.13E-55 | -1.69E-46 |
| MS.gene054706 | MS.gene29115 | -0.852317 | 5.00E-61 | -1.69E-46 |
| MS.gene054707 | MS.gene29115 | -0.813445 | 2.55E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene29115 | 0.827131 | 1.85E-54 | -1.69E-46 |
| MS.gene054742 | MS.gene29115 | -0.80025 | 1.57E-48 | -1.69E-46 |
| MS.gene054927 | MS.gene29115 | 0.862711 | 4.18E-64 | -1.69E-46 |
| MS.gene05494 | MS.gene29115 | 0.874704 | 5.48E-68 | -1.69E-46 |
| MS.gene054954 | MS.gene29115 | 0.824397 | 8.25E-54 | -1.69E-46 |
| MS.gene05505 | MS.gene29115 | 0.849146 | 3.90E-60 | -1.69E-46 |
| MS.gene055206 | MS.gene29115 | 0.838559 | 2.68E-57 | -1.69E-46 |
| MS.gene055224 | MS.gene29115 | 0.867124 | 1.72E-65 | -1.69E-46 |
| MS.gene055289 | MS.gene29115 | 0.836364 | 9.77E-57 | -1.69E-46 |
| MS.gene055362 | MS.gene29115 | 0.833961 | 3.95E-56 | -1.69E-46 |
| MS.gene055486 | MS.gene29115 | 0.836264 | 1.04E-56 | -1.69E-46 |
| MS.gene055502 | MS.gene29115 | 0.855085 | 7.99E-62 | -1.69E-46 |
| MS.gene055577 | MS.gene29115 | 0.880577 | 4.90E-70 | -1.69E-46 |
| MS.gene055722 | MS.gene29115 | 0.86522 | 6.91E-65 | -1.69E-46 |
| MS.gene055741 | MS.gene29115 | 0.830923 | 2.23E-55 | -1.69E-46 |
| MS.gene055744 | MS.gene29115 | 0.825617 | 4.25E-54 | -1.69E-46 |
| MS.gene055748 | MS.gene29115 | 0.824721 | 6.92E-54 | -1.69E-46 |
| MS.gene055750 | MS.gene29115 | 0.831664 | 1.47E-55 | -1.69E-46 |
| MS.gene055751 | MS.gene29115 | 0.815386 | 9.49E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene29115 | 0.861672 | 8.70E-64 | -1.69E-46 |
| MS.gene055909 | MS.gene29115 | 0.83797 | 3.80E-57 | -1.69E-46 |
| MS.gene055911 | MS.gene29115 | 0.833084 | 6.53E-56 | -1.69E-46 |
| MS.gene05592 | MS.gene29115 | 0.817105 | 3.92E-52 | -1.69E-46 |
| MS.gene055941 | MS.gene29115 | 0.877727 | 4.98E-69 | -1.69E-46 |
| MS.gene05601 | MS.gene29115 | 0.838656 | 2.53E-57 | -1.69E-46 |
| MS.gene056040 | MS.gene29115 | 0.827079 | 1.91E-54 | -1.69E-46 |
| MS.gene056046 | MS.gene29115 | 0.84559 | 3.69E-59 | -1.69E-46 |
| MS.gene056166 | MS.gene29115 | 0.89483 | 1.70E-75 | -1.69E-46 |
| MS.gene056387 | MS.gene29115 | 0.870518 | 1.37E-66 | -1.69E-46 |
| MS.gene056422 | MS.gene29115 | 0.857468 | 1.60E-62 | -1.69E-46 |
| MS.gene056446 | MS.gene29115 | 0.819756 | 9.82E-53 | -1.69E-46 |
| MS.gene056448 | MS.gene29115 | 0.880538 | 5.06E-70 | -1.69E-46 |
| MS.gene056487 | MS.gene29115 | 0.836163 | 1.10E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene29115 | 0.860293 | 2.28E-63 | -1.69E-46 |
| MS.gene056510 | MS.gene29115 | 0.857466 | 1.60E-62 | -1.69E-46 |
| MS.gene056511 | MS.gene29115 | 0.856621 | 2.84E-62 | -1.69E-46 |
| MS.gene05664 | MS.gene29115 | 0.837611 | 4.69E-57 | -1.69E-46 |
| MS.gene056657 | MS.gene29115 | 0.830736 | 2.48E-55 | -1.69E-46 |
| MS.gene05666 | MS.gene29115 | 0.849513 | 3.08E-60 | -1.69E-46 |
| MS.gene056692 | MS.gene29115 | 0.806597 | 7.62E-50 | -1.69E-46 |
| MS.gene056878 | MS.gene29115 | 0.8013 | 9.61E-49 | -1.69E-46 |
| MS.gene057048 | MS.gene29115 | 0.801625 | 8.24E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene29115 | 0.872521 | 2.98E-67 | -1.69E-46 |
| MS.gene057086 | MS.gene29115 | 0.889127 | 3.20E-73 | -1.69E-46 |
| MS.gene057124 | MS.gene29115 | 0.807792 | 4.25E-50 | -1.69E-46 |
| MS.gene057173 | MS.gene29115 | -0.803746 | 3.01E-49 | -1.69E-46 |
| MS.gene057289 | MS.gene29115 | 0.838743 | 2.40E-57 | -1.69E-46 |
| MS.gene057331 | MS.gene29115 | 0.825845 | 3.75E-54 | -1.69E-46 |
| MS.gene057416 | MS.gene29115 | 0.840396 | 8.92E-58 | -1.69E-46 |
| MS.gene057658 | MS.gene29115 | 0.835954 | 1.24E-56 | -1.69E-46 |
| MS.gene057734 | MS.gene29115 | 0.902294 | 1.12E-78 | -1.69E-46 |
| MS.gene057805 | MS.gene29115 | 0.800047 | 1.73E-48 | -1.69E-46 |
| MS.gene057831 | MS.gene29115 | 0.820633 | 6.19E-53 | -1.69E-46 |
| MS.gene057856 | MS.gene29115 | 0.868797 | 5.00E-66 | -1.69E-46 |
| MS.gene057857 | MS.gene29115 | 0.848579 | 5.60E-60 | -1.69E-46 |
| MS.gene05787 | MS.gene29115 | 0.867965 | 9.27E-66 | -1.69E-46 |
| MS.gene057926 | MS.gene29115 | 0.840916 | 6.52E-58 | -1.69E-46 |
| MS.gene058075 | MS.gene29115 | 0.80592 | 1.06E-49 | -1.69E-46 |
| MS.gene058090 | MS.gene29115 | 0.800736 | 1.25E-48 | -1.69E-46 |
| MS.gene058120 | MS.gene29115 | 0.860286 | 2.30E-63 | -1.69E-46 |
| MS.gene058130 | MS.gene29115 | 0.842919 | 1.93E-58 | -1.69E-46 |
| MS.gene058157 | MS.gene29115 | 0.875702 | 2.50E-68 | -1.69E-46 |
| MS.gene058338 | MS.gene29115 | 0.840158 | 1.03E-57 | -1.69E-46 |
| MS.gene058376 | MS.gene29115 | 0.819256 | 1.28E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene29115 | 0.871857 | 4.96E-67 | -1.69E-46 |
| MS.gene058419 | MS.gene29115 | 0.83512 | 2.02E-56 | -1.69E-46 |
| MS.gene058459 | MS.gene29115 | 0.816619 | 5.04E-52 | -1.69E-46 |
| MS.gene058544 | MS.gene29115 | 0.830556 | 2.75E-55 | -1.69E-46 |
| MS.gene058700 | MS.gene29115 | 0.818029 | 2.43E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene29115 | 0.855213 | 7.34E-62 | -1.69E-46 |
| MS.gene058838 | MS.gene29115 | 0.866059 | 3.76E-65 | -1.69E-46 |
| MS.gene058948 | MS.gene29115 | 0.846057 | 2.76E-59 | -1.69E-46 |
| MS.gene059022 | MS.gene29115 | 0.827213 | 1.77E-54 | -1.69E-46 |
| MS.gene059023 | MS.gene29115 | 0.856577 | 2.93E-62 | -1.69E-46 |
| MS.gene05913 | MS.gene29115 | 0.856304 | 3.52E-62 | -1.69E-46 |
| MS.gene059305 | MS.gene29115 | 0.838306 | 3.11E-57 | -1.69E-46 |
| MS.gene05934 | MS.gene29115 | 0.822366 | 2.46E-53 | -1.69E-46 |
| MS.gene059367 | MS.gene29115 | 0.881754 | 1.85E-70 | -1.69E-46 |
| MS.gene059368 | MS.gene29115 | 0.855315 | 6.85E-62 | -1.69E-46 |
| MS.gene059455 | MS.gene29115 | 0.840834 | 6.85E-58 | -1.69E-46 |
| MS.gene059667 | MS.gene29115 | 0.88927 | 2.82E-73 | -1.69E-46 |
| MS.gene059674 | MS.gene29115 | 0.820921 | 5.31E-53 | -1.69E-46 |
| MS.gene059677 | MS.gene29115 | 0.813986 | 1.94E-51 | -1.69E-46 |
| MS.gene059680 | MS.gene29115 | 0.815465 | 9.12E-52 | -1.69E-46 |
| MS.gene059699 | MS.gene29115 | -0.807437 | 5.06E-50 | -1.69E-46 |
| MS.gene059703 | MS.gene29115 | -0.809609 | 1.74E-50 | -1.69E-46 |
| MS.gene059711 | MS.gene29115 | 0.845407 | 4.14E-59 | -1.69E-46 |
| MS.gene059718 | MS.gene29115 | 0.873548 | 1.35E-67 | -1.69E-46 |
| MS.gene059801 | MS.gene29115 | 0.837009 | 6.69E-57 | -1.69E-46 |
| MS.gene059865 | MS.gene29115 | 0.860971 | 1.42E-63 | -1.69E-46 |
| MS.gene059902 | MS.gene29115 | 0.801078 | 1.07E-48 | -1.69E-46 |
| MS.gene05995 | MS.gene29115 | 0.828598 | 8.22E-55 | -1.69E-46 |
| MS.gene05996 | MS.gene29115 | 0.81516 | 1.07E-51 | -1.69E-46 |
| MS.gene06000 | MS.gene29115 | 0.849784 | 2.59E-60 | -1.69E-46 |
| MS.gene060295 | MS.gene29115 | 0.844137 | 9.11E-59 | -1.69E-46 |
| MS.gene060372 | MS.gene29115 | 0.843312 | 1.51E-58 | -1.69E-46 |
| MS.gene060403 | MS.gene29115 | 0.800419 | 1.45E-48 | -1.69E-46 |
| MS.gene060482 | MS.gene29115 | 0.867941 | 9.44E-66 | -1.69E-46 |
| MS.gene060762 | MS.gene29115 | 0.862693 | 4.23E-64 | -1.69E-46 |
| MS.gene060778 | MS.gene29115 | 0.867 | 1.89E-65 | -1.69E-46 |
| MS.gene06077 | MS.gene29115 | 0.831534 | 1.58E-55 | -1.69E-46 |
| MS.gene060804 | MS.gene29115 | 0.819281 | 1.26E-52 | -1.69E-46 |
| MS.gene060818 | MS.gene29115 | 0.812093 | 5.04E-51 | -1.69E-46 |
| MS.gene060835 | MS.gene29115 | 0.86598 | 3.98E-65 | -1.69E-46 |
| MS.gene060837 | MS.gene29115 | 0.889367 | 2.58E-73 | -1.69E-46 |
| MS.gene06092 | MS.gene29115 | 0.8531 | 2.99E-61 | -1.69E-46 |
| MS.gene06097 | MS.gene29115 | 0.87075 | 1.15E-66 | -1.69E-46 |
| MS.gene060982 | MS.gene29115 | 0.860799 | 1.61E-63 | -1.69E-46 |
| MS.gene061041 | MS.gene29115 | 0.815752 | 7.87E-52 | -1.69E-46 |
| MS.gene061134 | MS.gene29115 | 0.807016 | 6.21E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene29115 | 0.805414 | 1.35E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29115.t1 | MTR_3g073560 | 96.262 | 214 | 8 | 0 | 1 | 214 | 388 | 601 | 1.50e-147 | 423 |
| MS.gene29115.t1 | MTR_2g097690 | 31.746 | 126 | 58 | 3 | 1 | 105 | 33 | 151 | 5.09e-13 | 65.5 |
| MS.gene29115.t1 | MTR_2g097690 | 31.746 | 126 | 58 | 3 | 1 | 105 | 33 | 151 | 2.65e-12 | 64.7 |
| MS.gene29115.t1 | MTR_8g075780 | 36.264 | 91 | 51 | 2 | 4 | 91 | 25 | 111 | 3.59e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29115.t1 | AT1G77930 | 75.362 | 207 | 51 | 0 | 2 | 208 | 55 | 261 | 2.13e-115 | 330 |
| MS.gene29115.t1 | AT1G77930 | 75.362 | 207 | 51 | 0 | 2 | 208 | 55 | 261 | 2.13e-115 | 330 |
| MS.gene29115.t1 | AT1G77930 | 76.027 | 146 | 35 | 0 | 2 | 147 | 55 | 200 | 1.20e-82 | 244 |
Find 41 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCAGCAGTACCCTTAAA+AGG | 0.282851 | 3.4:-72199244 | MS.gene29115:CDS |
| AAAGATTGCTTATAGACGTT+TGG | 0.369471 | 3.4:-72201108 | MS.gene29115:CDS |
| CTGTGGCGAAAGCAACGAAT+TGG | 0.403026 | 3.4:-72201559 | MS.gene29115:CDS |
| CTGCCGTTTCACCTTCCTCA+AGG | 0.406425 | 3.4:+72200511 | None:intergenic |
| GTGATATGGCAATTTATGCT+TGG | 0.410426 | 3.4:-72199675 | MS.gene29115:CDS |
| TGATATGGCAATTTATGCTT+GGG | 0.419580 | 3.4:-72199674 | MS.gene29115:CDS |
| CCACAGTTCTCTTCTGATTG+AGG | 0.429219 | 3.4:+72201576 | None:intergenic |
| TTTACTCTTCAAGTCTATGA+TGG | 0.433498 | 3.4:-72200543 | MS.gene29115:intron |
| AGAATCTTCCTATATTCATC+TGG | 0.433520 | 3.4:+72199296 | None:intergenic |
| AAATTACCAAGAGTTTCATA+TGG | 0.440349 | 3.4:+72201521 | None:intergenic |
| AATTACCAAGAGTTTCATAT+GGG | 0.462947 | 3.4:+72201522 | None:intergenic |
| AGGTTGATCCAGATGAATAT+AGG | 0.465707 | 3.4:-72199304 | MS.gene29115:CDS |
| AGATGAATATAGGAAGATTC+TGG | 0.467333 | 3.4:-72199294 | MS.gene29115:CDS |
| TGCCGTTTCACCTTCCTCAA+GGG | 0.480126 | 3.4:+72200512 | None:intergenic |
| ATTCGATCAGACCCATGCTT+CGG | 0.489870 | 3.4:-72201604 | None:intergenic |
| TGTGGCGAAAGCAACGAATT+GGG | 0.490446 | 3.4:-72201558 | MS.gene29115:CDS |
| AAAATATGACACGGCTAACC+AGG | 0.515733 | 3.4:-72200427 | MS.gene29115:CDS |
| TCAGGCATCTCAAGCATGGA+TGG | 0.521128 | 3.4:-72199737 | MS.gene29115:intron |
| AACCCTTGAGGAAGGTGAAA+CGG | 0.521649 | 3.4:-72200514 | MS.gene29115:CDS |
| AAAACCCCATATGAAACTCT+TGG | 0.524253 | 3.4:-72201527 | MS.gene29115:intron |
| GATTCTGGCAAGAGAAAAGA+AGG | 0.532183 | 3.4:-72199279 | MS.gene29115:CDS |
| AAGGTGAAACGGCAGAAGCT+AGG | 0.542000 | 3.4:-72200503 | MS.gene29115:CDS |
| TCGTCAACTTTCTCGTTCAA+AGG | 0.543406 | 3.4:-72199617 | MS.gene29115:intron |
| CTTCAAGTCTATGATGGAAG+AGG | 0.550880 | 3.4:-72200537 | MS.gene29115:intron |
| TTACCTTCATAGGGTTGACC+TGG | 0.555641 | 3.4:+72200409 | None:intergenic |
| TAACCAGGTCAACCCTATGA+AGG | 0.562390 | 3.4:-72200412 | MS.gene29115:intron |
| ATTGAGGCGAAACCGAAGCA+TGG | 0.565622 | 3.4:+72201592 | None:intergenic |
| TCATTCAGGCATCTCAAGCA+TGG | 0.574313 | 3.4:-72199741 | MS.gene29115:intron |
| GGACATCTCTTAGCCGCAGA+AGG | 0.579963 | 3.4:-72199152 | MS.gene29115:CDS |
| GAAGAAATGAAGAAGACTAT+CGG | 0.580783 | 3.4:-72199173 | MS.gene29115:CDS |
| CATCTCAAGCATGGATGGAG+TGG | 0.584888 | 3.4:-72199732 | MS.gene29115:CDS |
| GGAAGAGGAACCCTTGAGGA+AGG | 0.586551 | 3.4:-72200522 | MS.gene29115:CDS |
| TTGAGGCGAAACCGAAGCAT+GGG | 0.597119 | 3.4:+72201593 | None:intergenic |
| TGAGCTTGATGATAGTGAAG+AGG | 0.600957 | 3.4:-72199126 | MS.gene29115:CDS |
| TGCTTATAGATGCAGAGAGG+CGG | 0.606451 | 3.4:-72200452 | MS.gene29115:CDS |
| ATCAAGCTCAAGACCTTCTG+CGG | 0.612130 | 3.4:+72199139 | None:intergenic |
| ATTACCAAGAGTTTCATATG+GGG | 0.647825 | 3.4:+72201523 | None:intergenic |
| TGATGGAAGAGGAACCCTTG+AGG | 0.650992 | 3.4:-72200526 | MS.gene29115:CDS |
| GGTGAAACAACAGAACTGGA+AGG | 0.677606 | 3.4:-72201152 | MS.gene29115:intron |
| CCTCAATCAGAAGAGAACTG+TGG | 0.739950 | 3.4:-72201576 | MS.gene29115:CDS |
| AATTGCTTATAGATGCAGAG+AGG | 0.753654 | 3.4:-72200455 | MS.gene29115:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAACTAATATCTAATATA+TGG | - | chr3.4:72200571-72200590 | MS.gene29115:intron | 10.0% |
| !! | AAAAAAATTTAGATAACTCT+CGG | - | chr3.4:72199995-72200014 | MS.gene29115:intron | 15.0% |
| !! | AATAAAAATATTACCTTCAT+AGG | + | chr3.4:72200312-72200331 | None:intergenic | 15.0% |
| !! | ATAAAAATATTACCTTCATA+GGG | + | chr3.4:72200311-72200330 | None:intergenic | 15.0% |
| !! | TAGATTAACTATTTAAATGA+TGG | - | chr3.4:72199372-72199391 | MS.gene29115:intron | 15.0% |
| !! | TTAATCTAATAGCTAAAAAT+TGG | - | chr3.4:72199251-72199270 | MS.gene29115:CDS | 15.0% |
| !!! | AGGTAATATTTTTATTTTTG+TGG | - | chr3.4:72200316-72200335 | MS.gene29115:intron | 15.0% |
| !! | ACTATTTAAATGATGGTTAA+TGG | - | chr3.4:72199379-72199398 | MS.gene29115:intron | 20.0% |
| !! | TAATTAAAAAAACACTAGCA+CGG | + | chr3.4:72200103-72200122 | None:intergenic | 20.0% |
| !!! | TTAAGATTTATGAGTTTTCA+AGG | + | chr3.4:72200859-72200878 | None:intergenic | 20.0% |
| !!! | TTGTTCCTTTTTGAAAAAAT+TGG | - | chr3.4:72199292-72199311 | MS.gene29115:CDS | 20.0% |
| !!! | TTTGACCAATTTTTTCAAAA+AGG | + | chr3.4:72199300-72199319 | None:intergenic | 20.0% |
| ! | AAATTACCAAGAGTTTCATA+TGG | + | chr3.4:72199190-72199209 | None:intergenic | 25.0% |
| ! | AACATATCACAAACAACTAA+TGG | + | chr3.4:72200073-72200092 | None:intergenic | 25.0% |
| ! | AAGAAGAAGTTAATGTGTTT+GGG | - | chr3.4:72199411-72199430 | MS.gene29115:intron | 25.0% |
| ! | AATTACCAAGAGTTTCATAT+GGG | + | chr3.4:72199189-72199208 | None:intergenic | 25.0% |
| ! | TCAAATTCACATATAGAATG+AGG | + | chr3.4:72199717-72199736 | None:intergenic | 25.0% |
| ! | TTAGTTGTTACTGTTAAGTA+TGG | - | chr3.4:72199438-72199457 | MS.gene29115:intron | 25.0% |
| !! | ATTGGAAAGAACAATTTTCA+CGG | - | chr3.4:72199933-72199952 | MS.gene29115:intron | 25.0% |
| !! | CAATAGAGATGAAAATTTTG+TGG | - | chr3.4:72199492-72199511 | MS.gene29115:intron | 25.0% |
| !! | TGACCATAACTTTATTTGTA+GGG | + | chr3.4:72201186-72201205 | None:intergenic | 25.0% |
| !!! | CATTTTTTAATCCTGTAGAA+AGG | - | chr3.4:72200651-72200670 | MS.gene29115:intron | 25.0% |
| !!! | GCTTTTAGCTTTTAAACAAA+GGG | + | chr3.4:72200699-72200718 | None:intergenic | 25.0% |
| !!! | TGCTTTTAGCTTTTAAACAA+AGG | + | chr3.4:72200700-72200719 | None:intergenic | 25.0% |
| !!! | TGTTCCTTTTTGGAAAAATT+GGG | - | chr3.4:72199223-72199242 | MS.gene29115:CDS | 25.0% |
| !!! | TTGTTCCTTTTTGGAAAAAT+TGG | - | chr3.4:72199222-72199241 | MS.gene29115:CDS | 25.0% |
| !!! | TTGTTTTTCACCAAAGAATA+GGG | - | chr3.4:72201285-72201304 | MS.gene29115:intron | 25.0% |
| AAAGATTGCTTATAGACGTT+TGG | - | chr3.4:72199600-72199619 | MS.gene29115:intron | 30.0% | |
| AAGTCAGGAACTTGATATAT+GGG | - | chr3.4:72200424-72200443 | MS.gene29115:CDS | 30.0% | |
| ACTAAATGATTGTATCACCT+TGG | - | chr3.4:72201154-72201173 | MS.gene29115:intron | 30.0% | |
| ACTTCCAATATTGAGTGATT+CGG | - | chr3.4:72201219-72201238 | MS.gene29115:intron | 30.0% | |
| AGAATCTTCCTATATTCATC+TGG | + | chr3.4:72201415-72201434 | None:intergenic | 30.0% | |
| AGATGAATATAGGAAGATTC+TGG | - | chr3.4:72201414-72201433 | MS.gene29115:intron | 30.0% | |
| ATATGTTGTCAGTTAACTGT+AGG | - | chr3.4:72201131-72201150 | MS.gene29115:CDS | 30.0% | |
| ATTACCAAGAGTTTCATATG+GGG | + | chr3.4:72199188-72199207 | None:intergenic | 30.0% | |
| CAAAAATTTACATCCATCAC+TGG | + | chr3.4:72200893-72200912 | None:intergenic | 30.0% | |
| GAAGAAATGAAGAAGACTAT+CGG | - | chr3.4:72201535-72201554 | MS.gene29115:CDS | 30.0% | |
| GAAGAAGAAGTTAATGTGTT+TGG | - | chr3.4:72199410-72199429 | MS.gene29115:intron | 30.0% | |
| GAGAGATATAATGCGAAAAA+AGG | - | chr3.4:72201507-72201526 | MS.gene29115:intron | 30.0% | |
| GTCATTTATTGAAGTTCATC+AGG | + | chr3.4:72200731-72200750 | None:intergenic | 30.0% | |
| GTGGTTATCAATAGTTAACT+AGG | - | chr3.4:72200335-72200354 | MS.gene29115:intron | 30.0% | |
| GTTTGTTCTTCAATTGTGTA+TGG | - | chr3.4:72199535-72199554 | MS.gene29115:intron | 30.0% | |
| TCTCCCTACAAATAAAGTTA+TGG | - | chr3.4:72201180-72201199 | MS.gene29115:intron | 30.0% | |
| TGATATGGCAATTTATGCTT+GGG | - | chr3.4:72201034-72201053 | MS.gene29115:intron | 30.0% | |
| TTTACTCTTCAAGTCTATGA+TGG | - | chr3.4:72200165-72200184 | MS.gene29115:intron | 30.0% | |
| ! | AACGAAAAGCTTTTAATCAG+CGG | - | chr3.4:72201009-72201028 | MS.gene29115:intron | 30.0% |
| ! | ATTTTTACATTGCACAAGTC+AGG | - | chr3.4:72200409-72200428 | MS.gene29115:intron | 30.0% |
| ! | CTGACCATAACTTTATTTGT+AGG | + | chr3.4:72201187-72201206 | None:intergenic | 30.0% |
| ! | TATAAGTGTGTGCCTTTTAA+GGG | + | chr3.4:72201479-72201498 | None:intergenic | 30.0% |
| !! | CTTGAAAGTATTTCCATTTC+AGG | + | chr3.4:72200831-72200850 | None:intergenic | 30.0% |
| !! | GGAAGTATTTATGAAATCTC+AGG | - | chr3.4:72201384-72201403 | MS.gene29115:intron | 30.0% |
| !! | GTTCCTTTTTGGAAAAATTG+GGG | - | chr3.4:72199224-72199243 | MS.gene29115:CDS | 30.0% |
| !! | TTTCTCGTTCAAAGGTATTA+GGG | - | chr3.4:72201099-72201118 | MS.gene29115:CDS | 30.0% |
| !!! | CTTTCAAGTTTGTTCCTTTT+TGG | - | chr3.4:72199213-72199232 | MS.gene29115:CDS | 30.0% |
| !!! | CTTTTTTTAATCGTTTACGC+AGG | - | chr3.4:72200360-72200379 | MS.gene29115:intron | 30.0% |
| !!! | GTTGTTTTTCACCAAAGAAT+AGG | - | chr3.4:72201284-72201303 | MS.gene29115:intron | 30.0% |
| AAAACCCCATATGAAACTCT+TGG | - | chr3.4:72199181-72199200 | MS.gene29115:CDS | 35.0% | |
| AATTGCTTATAGATGCAGAG+AGG | - | chr3.4:72200253-72200272 | MS.gene29115:intron | 35.0% | |
| ACTATCCACTCTTATATCTG+TGG | - | chr3.4:72200794-72200813 | MS.gene29115:intron | 35.0% | |
| ATAGAATGAGGTCATCACAA+CGG | + | chr3.4:72199705-72199724 | None:intergenic | 35.0% | |
| ATTTCAGCAGTACCCTTAAA+AGG | - | chr3.4:72201464-72201483 | MS.gene29115:intron | 35.0% | |
| CAAGTCAGGAACTTGATATA+TGG | - | chr3.4:72200423-72200442 | MS.gene29115:CDS | 35.0% | |
| CAATCAGACACTAAGTTGTA+TGG | + | chr3.4:72199917-72199936 | None:intergenic | 35.0% | |
| CATACAACTTAGTGTCTGAT+TGG | - | chr3.4:72199915-72199934 | MS.gene29115:intron | 35.0% | |
| CATATCTCTTTCCTTTCTAC+AGG | + | chr3.4:72200665-72200684 | None:intergenic | 35.0% | |
| GACTTGAAGAGTAAAGTAGA+AGG | + | chr3.4:72200160-72200179 | None:intergenic | 35.0% | |
| GTGATATGGCAATTTATGCT+TGG | - | chr3.4:72201033-72201052 | MS.gene29115:intron | 35.0% | |
| TAAGTATGGTTGTGTGATGT+TGG | - | chr3.4:72199452-72199471 | MS.gene29115:intron | 35.0% | |
| TAAGTTGTATGGCTGATAGT+TGG | + | chr3.4:72199906-72199925 | None:intergenic | 35.0% | |
| TATTTGTAGGGAGAAAACCA+AGG | + | chr3.4:72201174-72201193 | None:intergenic | 35.0% | |
| TCTTCCGAATCACTCAATAT+TGG | + | chr3.4:72201226-72201245 | None:intergenic | 35.0% | |
| TGATGTTTATCTGTGAAGCT+AGG | + | chr3.4:72201258-72201277 | None:intergenic | 35.0% | |
| TTGTAGAACGAACATGCTTA+TGG | + | chr3.4:72199856-72199875 | None:intergenic | 35.0% | |
| ! | AAGTTGCAAAGACTTGTTTC+AGG | + | chr3.4:72200498-72200517 | None:intergenic | 35.0% |
| ! | ACGAAAAGCTTTTAATCAGC+GGG | - | chr3.4:72201010-72201029 | MS.gene29115:intron | 35.0% |
| ! | AGGTTGATCCAGATGAATAT+AGG | - | chr3.4:72201404-72201423 | MS.gene29115:intron | 35.0% |
| ! | AGTTGCAAAGACTTGTTTCA+GGG | + | chr3.4:72200497-72200516 | None:intergenic | 35.0% |
| ! | ATAATTCAAAGCGTCTTCTG+TGG | + | chr3.4:72200772-72200791 | None:intergenic | 35.0% |
| ! | GCGAAATTTTATCATCCAGA+TGG | - | chr3.4:72199622-72199641 | MS.gene29115:CDS | 35.0% |
| ! | GTATAAGTGTGTGCCTTTTA+AGG | + | chr3.4:72201480-72201499 | None:intergenic | 35.0% |
| ! | TCTCCCCAATTTTTCCAAAA+AGG | + | chr3.4:72199230-72199249 | None:intergenic | 35.0% |
| ! | TTTTCCAACACCCTATTCTT+TGG | + | chr3.4:72201298-72201317 | None:intergenic | 35.0% |
| !! | AAATAGCATATGGTTCTGAG+AGG | + | chr3.4:72201344-72201363 | None:intergenic | 35.0% |
| !! | CTTTCTCGTTCAAAGGTATT+AGG | - | chr3.4:72201098-72201117 | MS.gene29115:CDS | 35.0% |
| !!! | GTGATGTTGGTGTTTTTTGT+AGG | - | chr3.4:72199465-72199484 | MS.gene29115:intron | 35.0% |
| AAAATATGACACGGCTAACC+AGG | - | chr3.4:72200281-72200300 | MS.gene29115:intron | 40.0% | |
| AAAATCGATACGACCAGTGA+TGG | - | chr3.4:72200877-72200896 | MS.gene29115:intron | 40.0% | |
| AGATTAAGACGCATACCATC+TGG | + | chr3.4:72199640-72199659 | None:intergenic | 40.0% | |
| ATACTTCCCAGTCATTTGCA+AGG | + | chr3.4:72201372-72201391 | None:intergenic | 40.0% | |
| CAAGGGGGAAAAATAGCATA+TGG | + | chr3.4:72201354-72201373 | None:intergenic | 40.0% | |
| GAGGCGGAAAAAATATGACA+CGG | - | chr3.4:72200272-72200291 | MS.gene29115:intron | 40.0% | |
| GATTCTGGCAAGAGAAAAGA+AGG | - | chr3.4:72201429-72201448 | MS.gene29115:intron | 40.0% | |
| GTATGGTGAAACAACAGAAC+TGG | - | chr3.4:72199552-72199571 | MS.gene29115:intron | 40.0% | |
| TACTTCCCAGTCATTTGCAA+GGG | + | chr3.4:72201371-72201390 | None:intergenic | 40.0% | |
| TCGTCAACTTTCTCGTTCAA+AGG | - | chr3.4:72201091-72201110 | MS.gene29115:CDS | 40.0% | |
| TTAGATAACTCTCGGAGCTT+CGG | - | chr3.4:72200003-72200022 | MS.gene29115:intron | 40.0% | |
| TTCACCAAAGAATAGGGTGT+TGG | - | chr3.4:72201291-72201310 | MS.gene29115:intron | 40.0% | |
| ! | ATTGATGTGCTGTGTCATTC+AGG | - | chr3.4:72200953-72200972 | MS.gene29115:intron | 40.0% |
| ! | CGAAAAGCTTTTAATCAGCG+GGG | - | chr3.4:72201011-72201030 | MS.gene29115:intron | 40.0% |
| ! | CTTCAAGTCTATGATGGAAG+AGG | - | chr3.4:72200171-72200190 | MS.gene29115:intron | 40.0% |
| ! | GGAAAGAACAATTTTCACGG+TGG | - | chr3.4:72199936-72199955 | MS.gene29115:intron | 40.0% |
| ! | TGAGCTTGATGATAGTGAAG+AGG | - | chr3.4:72201582-72201601 | MS.gene29115:CDS | 40.0% |
| ! | TTTTAATCAGCGGGGTGATA+TGG | - | chr3.4:72201019-72201038 | MS.gene29115:intron | 40.0% |
| AACCCTTGAGGAAGGTGAAA+CGG | - | chr3.4:72200194-72200213 | MS.gene29115:intron | 45.0% | |
| ACTTCCCAGTCATTTGCAAG+GGG | + | chr3.4:72201370-72201389 | None:intergenic | 45.0% | |
| ATCAAGCTCAAGACCTTCTG+CGG | + | chr3.4:72201572-72201591 | None:intergenic | 45.0% | |
| CACAGCCACAGATATAAGAG+TGG | + | chr3.4:72200802-72200821 | None:intergenic | 45.0% | |
| CCACAGTTCTCTTCTGATTG+AGG | + | chr3.4:72199135-72199154 | None:intergenic | 45.0% | |
| CCTCAATCAGAAGAGAACTG+TGG | - | chr3.4:72199132-72199151 | MS.gene29115:CDS | 45.0% | |
| GGTGAAACAACAGAACTGGA+AGG | - | chr3.4:72199556-72199575 | MS.gene29115:intron | 45.0% | |
| TAACCAGGTCAACCCTATGA+AGG | - | chr3.4:72200296-72200315 | MS.gene29115:intron | 45.0% | |
| TATCTGTGAAGCTAGGACCA+TGG | + | chr3.4:72201251-72201270 | None:intergenic | 45.0% | |
| TCATTCAGGCATCTCAAGCA+TGG | - | chr3.4:72200967-72200986 | MS.gene29115:intron | 45.0% | |
| TCTCCTTCTACGTTTCAAGC+TGG | - | chr3.4:72200544-72200563 | MS.gene29115:intron | 45.0% | |
| TGACCAGCTTGAAACGTAGA+AGG | + | chr3.4:72200550-72200569 | None:intergenic | 45.0% | |
| TGCTTATAGATGCAGAGAGG+CGG | - | chr3.4:72200256-72200275 | MS.gene29115:intron | 45.0% | |
| TGTGGCGAAAGCAACGAATT+GGG | - | chr3.4:72199150-72199169 | MS.gene29115:CDS | 45.0% | |
| TTACCTTCATAGGGTTGACC+TGG | + | chr3.4:72200302-72200321 | None:intergenic | 45.0% | |
| TTTCCCCCTTGCAAATGACT+GGG | - | chr3.4:72201363-72201382 | MS.gene29115:intron | 45.0% | |
| ! | GAGTGATTCGGAAGAATCCA+TGG | - | chr3.4:72201231-72201250 | MS.gene29115:intron | 45.0% |
| ! | TTTTCCCCCTTGCAAATGAC+TGG | - | chr3.4:72201362-72201381 | MS.gene29115:intron | 45.0% |
| AAGGTGAAACGGCAGAAGCT+AGG | - | chr3.4:72200205-72200224 | MS.gene29115:intron | 50.0% | |
| CATCTCAAGCATGGATGGAG+TGG | - | chr3.4:72200976-72200995 | MS.gene29115:intron | 50.0% | |
| CTGTGGCGAAAGCAACGAAT+TGG | - | chr3.4:72199149-72199168 | MS.gene29115:CDS | 50.0% | |
| CTTCCCAGTCATTTGCAAGG+GGG | + | chr3.4:72201369-72201388 | None:intergenic | 50.0% | |
| GGCTGTGATACAGCCTGAAA+TGG | - | chr3.4:72200815-72200834 | MS.gene29115:intron | 50.0% | |
| TCAGGCATCTCAAGCATGGA+TGG | - | chr3.4:72200971-72200990 | MS.gene29115:intron | 50.0% | |
| TGATGGAAGAGGAACCCTTG+AGG | - | chr3.4:72200182-72200201 | MS.gene29115:intron | 50.0% | |
| ! | TGCCGTTTCACCTTCCTCAA+GGG | + | chr3.4:72200199-72200218 | None:intergenic | 50.0% |
| GGAAGAGGAACCCTTGAGGA+AGG | - | chr3.4:72200186-72200205 | MS.gene29115:intron | 55.0% | |
| GGACATCTCTTAGCCGCAGA+AGG | - | chr3.4:72201556-72201575 | MS.gene29115:CDS | 55.0% | |
| ! | CTGCCGTTTCACCTTCCTCA+AGG | + | chr3.4:72200200-72200219 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 72199118 | 72201612 | 72199118 | ID=MS.gene29115 |
| chr3.4 | mRNA | 72199118 | 72201612 | 72199118 | ID=MS.gene29115.t1;Parent=MS.gene29115 |
| chr3.4 | exon | 72201528 | 72201612 | 72201528 | ID=MS.gene29115.t1.exon1;Parent=MS.gene29115.t1 |
| chr3.4 | CDS | 72201528 | 72201612 | 72201528 | ID=cds.MS.gene29115.t1;Parent=MS.gene29115.t1 |
| chr3.4 | exon | 72201087 | 72201161 | 72201087 | ID=MS.gene29115.t1.exon2;Parent=MS.gene29115.t1 |
| chr3.4 | CDS | 72201087 | 72201161 | 72201087 | ID=cds.MS.gene29115.t1;Parent=MS.gene29115.t1 |
| chr3.4 | exon | 72200413 | 72200552 | 72200413 | ID=MS.gene29115.t1.exon3;Parent=MS.gene29115.t1 |
| chr3.4 | CDS | 72200413 | 72200552 | 72200413 | ID=cds.MS.gene29115.t1;Parent=MS.gene29115.t1 |
| chr3.4 | exon | 72199618 | 72199755 | 72199618 | ID=MS.gene29115.t1.exon4;Parent=MS.gene29115.t1 |
| chr3.4 | CDS | 72199618 | 72199755 | 72199618 | ID=cds.MS.gene29115.t1;Parent=MS.gene29115.t1 |
| chr3.4 | exon | 72199118 | 72199324 | 72199118 | ID=MS.gene29115.t1.exon5;Parent=MS.gene29115.t1 |
| chr3.4 | CDS | 72199118 | 72199324 | 72199118 | ID=cds.MS.gene29115.t1;Parent=MS.gene29115.t1 |
| Gene Sequence |
| Protein sequence |
