AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072196


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072196.t1 MTR_8g014910 98.592 355 5 0 1 355 1 355 0.0 718
MS.gene072196.t1 MTR_2g100620 77.208 351 80 0 4 354 3 353 0.0 570
MS.gene072196.t1 MTR_2g084585 58.873 355 143 2 1 355 1 352 1.08e-150 428
MS.gene072196.t1 MTR_4g056280 49.719 356 172 3 1 354 1 351 6.51e-124 361
MS.gene072196.t1 MTR_4g056160 51.368 329 158 2 29 355 24 352 4.84e-117 343
MS.gene072196.t1 MTR_5g084750 42.899 338 189 2 10 347 11 344 1.42e-97 293
MS.gene072196.t1 MTR_1g025780 43.567 342 184 5 10 347 17 353 3.75e-97 293
MS.gene072196.t1 MTR_3g464730 42.982 342 193 2 7 347 3 343 3.90e-96 290
MS.gene072196.t1 MTR_5g084790 42.453 318 182 1 30 347 30 346 1.08e-95 289
MS.gene072196.t1 MTR_3g082830 43.963 323 180 1 30 352 36 357 1.55e-95 288
MS.gene072196.t1 MTR_5g084770 40.762 341 193 4 10 347 9 343 5.46e-95 287
MS.gene072196.t1 MTR_5g074270 44.127 315 171 4 32 343 33 345 2.97e-91 278
MS.gene072196.t1 MTR_4g087985 40.510 353 197 6 10 352 15 364 3.75e-90 275
MS.gene072196.t1 MTR_8g075230 42.675 314 179 1 30 343 34 346 6.02e-89 271
MS.gene072196.t1 MTR_5g022630 43.492 315 175 3 30 342 41 354 5.22e-88 270
MS.gene072196.t1 MTR_2g015080 39.003 341 196 6 8 338 14 352 1.21e-87 269
MS.gene072196.t1 MTR_3g114090 40.698 344 196 4 10 347 9 350 4.69e-86 264
MS.gene072196.t1 MTR_8g075200 40.379 317 188 1 31 347 40 355 8.70e-86 265
MS.gene072196.t1 MTR_5g022640 39.939 328 192 3 19 342 27 353 1.82e-85 263
MS.gene072196.t1 MTR_1g025760 40.841 333 188 5 10 337 56 384 2.13e-85 264
MS.gene072196.t1 MTR_8g075220 40.373 322 186 3 31 347 39 359 6.97e-84 259
MS.gene072196.t1 MTR_3g114120 42.038 314 180 2 30 343 45 356 2.13e-83 258
MS.gene072196.t1 MTR_1g025680 38.857 350 206 4 4 347 1 348 3.91e-83 260
MS.gene072196.t1 MTR_1g025720 40.575 313 184 2 31 343 36 346 1.17e-82 255
MS.gene072196.t1 MTR_1g025700 41.325 317 184 2 27 343 45 359 2.72e-82 255
MS.gene072196.t1 MTR_1108s0010 51.364 220 95 2 135 354 3 210 6.86e-76 233
MS.gene072196.t1 MTR_5g083040 36.677 319 192 5 31 342 31 346 3.48e-71 226
MS.gene072196.t1 MTR_1g025910 38.689 305 182 4 37 340 41 341 2.76e-68 219
MS.gene072196.t1 MTR_7g116570 34.375 352 219 8 4 347 1 348 1.13e-65 212
MS.gene072196.t1 MTR_7g116500 34.682 346 212 8 12 348 8 348 2.76e-65 211
MS.gene072196.t1 MTR_7g116520 34.582 347 214 8 4 347 12 348 5.72e-64 207
MS.gene072196.t1 MTR_1g069175 35.938 320 196 6 32 346 33 348 5.47e-63 205
MS.gene072196.t1 MTR_1g079540 35.826 321 197 7 32 348 31 346 6.49e-63 205
MS.gene072196.t1 MTR_7g116510 33.429 347 221 7 4 347 1 340 1.08e-61 201
MS.gene072196.t1 MTR_8g079050 32.948 346 222 6 10 347 15 358 4.64e-61 200
MS.gene072196.t1 MTR_0565s0010 35.398 339 205 9 10 343 13 342 1.03e-60 199
MS.gene072196.t1 MTR_5g009100 33.230 322 194 5 35 346 49 359 2.69e-60 199
MS.gene072196.t1 MTR_6g021530 33.333 354 219 9 1 347 1 344 1.02e-59 196
MS.gene072196.t1 MTR_4g019880 32.861 353 226 8 1 347 1 348 1.10e-59 197
MS.gene072196.t1 MTR_3g052490 35.174 344 207 10 12 346 11 347 1.25e-59 196
MS.gene072196.t1 MTR_8g087890 36.657 341 199 10 10 343 10 340 4.89e-59 195
MS.gene072196.t1 MTR_1g024890 33.235 340 218 7 12 347 12 346 1.06e-58 194
MS.gene072196.t1 MTR_1g079530 34.195 348 212 8 12 354 9 344 1.60e-58 193
MS.gene072196.t1 MTR_2g033920 34.783 322 202 6 30 347 33 350 4.41e-58 192
MS.gene072196.t1 MTR_3g024510 33.728 338 212 8 11 343 17 347 2.61e-57 191
MS.gene072196.t1 MTR_5g078210 35.294 340 202 11 12 344 6 334 3.05e-57 190
MS.gene072196.t1 MTR_5g093090 33.239 352 219 9 4 347 1 344 2.12e-56 188
MS.gene072196.t1 MTR_4g122200 33.232 328 205 6 30 350 33 353 1.07e-55 186
MS.gene072196.t1 MTR_3g005650 34.328 335 208 9 11 343 11 335 7.43e-55 184
MS.gene072196.t1 MTR_8g031420 34.483 319 190 9 32 343 35 341 1.23e-54 183
MS.gene072196.t1 MTR_7g008060 31.487 343 211 8 11 347 10 334 2.28e-54 182
MS.gene072196.t1 MTR_4g035353 31.700 347 227 9 1 343 1 341 2.76e-54 182
MS.gene072196.t1 MTR_3g435540 34.870 347 203 12 9 347 6 337 2.89e-54 182
MS.gene072196.t1 MTR_3g052480 33.623 345 212 11 12 346 12 349 5.15e-54 182
MS.gene072196.t1 MTR_3g052580 32.945 343 214 11 12 346 8 342 6.87e-54 182
MS.gene072196.t1 MTR_3g052580 32.945 343 214 11 12 346 7 341 1.20e-53 182
MS.gene072196.t1 MTR_4g108690 34.796 319 193 9 36 347 31 341 1.44e-53 181
MS.gene072196.t1 MTR_4g036375 54.902 153 69 0 26 178 24 176 8.33e-53 173
MS.gene072196.t1 MTR_2g044100 34.242 330 204 7 32 354 43 366 1.50e-52 179
MS.gene072196.t1 MTR_8g031430 34.049 326 188 11 32 346 37 346 1.34e-51 175
MS.gene072196.t1 MTR_3g005660 35.093 322 195 10 30 343 34 349 2.14e-51 175
MS.gene072196.t1 MTR_0009s0250 35.385 325 186 12 30 348 31 337 1.12e-50 172
MS.gene072196.t1 MTR_8g022790 33.435 329 199 9 32 355 37 350 1.64e-50 172
MS.gene072196.t1 MTR_2g033930 30.435 345 224 6 10 347 10 345 2.11e-50 172
MS.gene072196.t1 MTR_8g074570 30.211 331 220 4 31 355 37 362 5.42e-49 169
MS.gene072196.t1 MTR_8g022810 32.087 321 206 7 32 346 41 355 9.70e-49 168
MS.gene072196.t1 MTR_8g031390 31.988 322 193 9 32 343 37 342 1.85e-48 167
MS.gene072196.t1 MTR_3g098270 32.188 320 209 6 29 343 31 347 2.13e-48 167
MS.gene072196.t1 MTR_8g031400 32.500 320 195 10 32 343 37 343 3.10e-47 164
MS.gene072196.t1 MTR_8g074560 30.769 351 222 13 9 346 7 349 3.60e-46 161
MS.gene072196.t1 MTR_6g049230 57.377 122 51 1 207 328 74 194 1.69e-45 154
MS.gene072196.t1 MTR_2g017925 34.796 319 186 11 30 343 31 332 1.92e-45 159
MS.gene072196.t1 MTR_8g087870 32.075 318 198 8 30 344 27 329 4.04e-45 158
MS.gene072196.t1 MTR_2g033920 34.701 268 164 5 30 291 33 295 1.53e-44 155
MS.gene072196.t1 MTR_3g021460 32.945 343 204 11 9 345 9 331 4.94e-44 155
MS.gene072196.t1 MTR_1g030268 31.806 371 214 13 1 346 10 366 3.43e-43 154
MS.gene072196.t1 MTR_2g017875 30.723 332 210 8 18 343 20 337 8.88e-43 152
MS.gene072196.t1 MTR_8g074580 27.665 394 232 8 10 354 19 408 1.11e-42 153
MS.gene072196.t1 MTR_4g056220 53.488 129 59 1 226 354 61 188 1.19e-42 147
MS.gene072196.t1 MTR_3g023220 33.642 324 185 11 30 345 31 332 2.03e-42 151
MS.gene072196.t1 MTR_4g036385 54.839 124 55 1 231 354 13 135 2.65e-42 144
MS.gene072196.t1 MTR_5g093090 33.108 296 184 7 4 291 1 290 4.45e-42 149
MS.gene072196.t1 MTR_5g078210 33.566 286 177 8 12 291 6 284 5.65e-42 149
MS.gene072196.t1 MTR_2g017955 33.714 350 206 14 7 346 6 339 6.94e-42 150
MS.gene072196.t1 MTR_8g031390 32.975 279 164 8 32 303 37 299 1.86e-41 147
MS.gene072196.t1 MTR_2g461580 31.765 340 209 11 10 344 9 330 2.03e-41 148
MS.gene072196.t1 MTR_7g087190 31.250 368 213 13 10 347 19 376 1.45e-38 142
MS.gene072196.t1 MTR_1g030275 31.319 364 211 13 9 347 17 366 1.55e-38 141
MS.gene072196.t1 MTR_2g017915 31.322 348 196 13 7 346 6 318 3.28e-38 140
MS.gene072196.t1 MTR_2g017965 31.686 344 207 14 13 343 9 337 4.35e-38 140
MS.gene072196.t1 MTR_1g030230 29.508 366 222 12 7 346 5 360 2.35e-36 135
MS.gene072196.t1 MTR_1g030220 30.448 335 199 11 32 342 40 364 6.37e-35 132
MS.gene072196.t1 MTR_2g015580 31.522 368 204 17 8 347 26 373 1.12e-34 131
MS.gene072196.t1 MTR_5g074210 43.972 141 76 3 207 346 66 204 2.24e-34 126
MS.gene072196.t1 MTR_1g079590 34.171 199 127 3 12 207 11 208 3.25e-34 125
MS.gene072196.t1 MTR_8g089805 27.177 379 223 13 7 347 9 372 2.84e-33 127
MS.gene072196.t1 MTR_1g030340 30.460 348 193 12 31 346 41 371 3.75e-33 127
MS.gene072196.t1 MTR_7g113860 29.759 373 219 13 6 347 5 365 1.43e-32 125
MS.gene072196.t1 MTR_3g463960 28.358 335 214 9 32 347 44 371 2.34e-32 125
MS.gene072196.t1 MTR_3g463950 28.358 335 214 9 32 347 44 371 2.34e-32 125
MS.gene072196.t1 MTR_3g463970 28.358 335 214 9 32 347 44 371 2.34e-32 125
MS.gene072196.t1 MTR_3g463940 28.358 335 214 9 32 347 44 371 2.34e-32 125
MS.gene072196.t1 MTR_6g049220 38.547 179 65 1 27 205 25 158 2.70e-32 119
MS.gene072196.t1 MTR_1g030268 32.468 308 177 12 1 291 10 303 4.48e-32 123
MS.gene072196.t1 MTR_7g033165 31.054 351 189 15 31 347 32 363 5.95e-32 124
MS.gene072196.t1 MTR_7g033150 26.913 379 220 14 9 347 8 369 7.00e-32 124
MS.gene072196.t1 MTR_8g022810 28.660 321 164 9 32 346 41 302 1.30e-31 121
MS.gene072196.t1 MTR_5g087690 28.485 330 203 11 28 344 46 355 1.35e-31 122
MS.gene072196.t1 MTR_1g082390 29.255 376 218 11 4 347 1 360 1.65e-31 122
MS.gene072196.t1 MTR_3g463930 28.011 357 222 10 18 347 30 378 4.15e-31 121
MS.gene072196.t1 MTR_7g113860 30.725 345 198 14 31 347 28 359 1.19e-30 120
MS.gene072196.t1 MTR_7g111780 29.607 331 204 13 31 347 34 349 5.88e-30 118
MS.gene072196.t1 MTR_0127s0040 31.674 221 141 7 130 345 4 219 2.16e-29 113
MS.gene072196.t1 MTR_2g043980 29.973 367 214 14 1 347 1 344 4.26e-29 115
MS.gene072196.t1 MTR_8g028160 28.032 371 225 12 1 343 7 363 7.59e-29 115
MS.gene072196.t1 MTR_1g030265 29.392 296 180 8 77 346 41 333 1.13e-28 114
MS.gene072196.t1 MTR_6g007100 27.446 368 221 14 4 347 1 346 1.33e-28 114
MS.gene072196.t1 MTR_2g087292 27.812 320 148 7 30 348 31 268 2.67e-28 111
MS.gene072196.t1 MTR_2g015630 29.254 335 202 15 37 347 36 359 2.93e-28 114
MS.gene072196.t1 MTR_2g018015 37.306 193 115 5 26 214 30 220 7.58e-28 111
MS.gene072196.t1 MTR_7g116870 26.722 363 230 12 3 342 6 355 8.11e-28 112
MS.gene072196.t1 MTR_5g093090 36.275 204 119 7 4 199 1 201 1.08e-27 108
MS.gene072196.t1 MTR_0029s0050 28.889 360 213 15 9 347 5 342 1.78e-27 111
MS.gene072196.t1 MTR_2g079090 28.011 357 220 13 9 347 5 342 2.22e-27 110
MS.gene072196.t1 MTR_2g015590 28.962 366 218 14 7 347 10 358 2.61e-27 110
MS.gene072196.t1 MTR_2g079080 28.492 358 217 14 9 347 5 342 7.46e-27 109
MS.gene072196.t1 MTR_0029s0100 28.889 360 213 15 9 347 5 342 1.13e-26 108
MS.gene072196.t1 MTR_6g007095 27.566 341 212 10 29 347 38 365 1.21e-26 111
MS.gene072196.t1 MTR_6g007095 27.108 332 205 12 35 347 368 681 2.04e-23 102
MS.gene072196.t1 MTR_3g069780 28.783 337 207 13 32 347 30 354 1.43e-26 108
MS.gene072196.t1 MTR_3g438030 28.869 336 208 13 32 347 30 354 1.66e-25 105
MS.gene072196.t1 MTR_7g033155 25.278 360 211 12 32 347 38 383 4.03e-25 105
MS.gene072196.t1 MTR_8g038680 26.027 365 234 12 9 347 3 357 3.00e-24 102
MS.gene072196.t1 MTR_2g015650 29.204 339 205 14 32 347 31 357 7.53e-24 101
MS.gene072196.t1 MTR_6g007090 26.316 342 211 11 31 347 38 363 1.24e-23 100
MS.gene072196.t1 MTR_3g448360 27.614 373 223 15 11 352 3 359 2.88e-23 99.8
MS.gene072196.t1 MTR_7g111780 27.519 258 166 6 102 347 2 250 1.78e-22 95.5
MS.gene072196.t1 MTR_4g104240 26.176 340 212 12 33 350 40 362 4.41e-22 96.7
MS.gene072196.t1 MTR_8g089805 25.614 285 170 9 95 347 30 304 2.96e-21 93.2
MS.gene072196.t1 MTR_7g104220 26.140 329 213 12 29 348 39 346 3.69e-21 93.6
MS.gene072196.t1 MTR_7g113860 29.889 271 154 10 105 347 29 291 5.83e-21 92.4
MS.gene072196.t1 MTR_3g069520 26.957 345 211 12 32 352 30 357 1.98e-20 91.7
MS.gene072196.t1 MTR_2g015670 27.761 335 201 12 32 347 31 343 1.17e-19 89.4
MS.gene072196.t1 MTR_7g033165 29.825 285 160 12 31 291 32 300 2.13e-19 87.8
MS.gene072196.t1 MTR_1g060500 27.988 343 184 13 33 346 41 349 2.75e-19 88.2
MS.gene072196.t1 MTR_2g017925 30.594 219 134 8 129 343 25 229 2.77e-19 86.7
MS.gene072196.t1 MTR_8g062580 38.318 107 64 2 237 343 73 177 6.00e-19 85.5
MS.gene072196.t1 MTR_1g092760 25.559 313 202 13 33 336 40 330 7.19e-19 87.0
MS.gene072196.t1 MTR_1g092750 25.472 318 209 12 33 342 41 338 9.88e-19 86.7
MS.gene072196.t1 MTR_1g092690 26.582 316 194 13 33 336 52 341 2.20e-18 85.5
MS.gene072196.t1 MTR_1g092740 26.032 315 198 13 33 336 39 329 8.36e-18 84.0
MS.gene072196.t1 MTR_5g084880 36.538 104 66 0 188 291 9 112 9.41e-18 79.3
MS.gene072196.t1 MTR_8g012540 25.240 313 206 9 9 302 3 306 1.15e-17 83.2
MS.gene072196.t1 MTR_6g034400 34.959 123 80 0 83 205 2 124 3.34e-17 77.4
MS.gene072196.t1 MTR_2g015590 28.723 282 166 11 32 291 31 299 4.85e-17 81.6
MS.gene072196.t1 MTR_1g060490 25.360 347 196 12 33 354 38 346 1.98e-16 79.7
MS.gene072196.t1 MTR_2g043990 28.296 311 166 12 1 290 63 337 1.42e-15 77.0
MS.gene072196.t1 MTR_4g056290 54.386 57 25 1 294 350 47 102 2.14e-14 69.3
MS.gene072196.t1 MTR_5g062890 45.349 86 42 2 1 85 1 82 2.94e-14 68.2
MS.gene072196.t1 MTR_5g062900 48.438 64 28 1 191 254 51 109 4.83e-12 63.2
MS.gene072196.t1 MTR_0717s0010 53.448 58 27 0 41 98 15 72 8.86e-12 61.6
MS.gene072196.t1 MTR_2g017895 22.677 269 173 8 80 343 5 243 2.10e-11 63.9
MS.gene072196.t1 MTR_1g079570 26.829 123 87 3 225 347 4 123 3.29e-11 61.2
MS.gene072196.t1 MTR_5g093550 53.571 56 24 2 291 346 79 132 9.93e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072196.t1 AT3G16370 75.904 332 78 1 23 354 23 352 0.0 525
MS.gene072196.t1 AT5G22810 60.303 330 127 2 29 355 31 359 4.03e-148 422
MS.gene072196.t1 AT5G03810 57.020 349 147 3 8 355 7 353 5.90e-144 411
MS.gene072196.t1 AT5G03820 55.432 359 151 4 4 355 1 357 2.58e-142 407
MS.gene072196.t1 AT5G03820 57.267 344 143 3 14 355 44 385 3.62e-141 405
MS.gene072196.t1 AT3G53100 51.695 354 167 3 1 354 1 350 1.07e-130 378
MS.gene072196.t1 AT5G42170 45.625 320 166 3 30 347 48 361 1.42e-100 301
MS.gene072196.t1 AT2G04570 42.363 347 195 3 1 347 1 342 4.14e-99 297
MS.gene072196.t1 AT2G42990 41.956 317 183 1 30 346 26 341 7.41e-94 284
MS.gene072196.t1 AT3G14820 43.789 322 172 5 28 347 28 342 1.94e-93 283
MS.gene072196.t1 AT5G45960 44.551 312 166 4 30 336 45 354 3.10e-93 283
MS.gene072196.t1 AT1G75880 44.099 322 179 1 26 347 46 366 1.13e-91 279
MS.gene072196.t1 AT1G75900 41.124 338 197 2 10 347 21 356 2.09e-91 278
MS.gene072196.t1 AT1G59406 41.449 345 190 6 8 347 4 341 5.06e-90 274
MS.gene072196.t1 AT1G59030 41.449 345 190 6 8 347 4 341 5.06e-90 274
MS.gene072196.t1 AT1G58725 41.449 345 190 6 8 347 4 341 5.06e-90 274
MS.gene072196.t1 AT1G20120 42.547 322 184 1 26 347 72 392 7.26e-90 275
MS.gene072196.t1 AT1G75880 43.963 323 179 2 26 347 46 367 7.81e-90 275
MS.gene072196.t1 AT1G06990 40.062 322 189 3 28 347 33 352 9.48e-89 271
MS.gene072196.t1 AT2G30310 40.346 347 189 8 4 338 1 341 9.81e-89 271
MS.gene072196.t1 AT4G26790 39.329 328 192 2 20 347 23 343 1.89e-87 268
MS.gene072196.t1 AT4G26790 39.329 328 192 2 20 347 23 343 1.89e-87 268
MS.gene072196.t1 AT1G75890 42.675 314 178 2 31 343 46 358 1.99e-87 268
MS.gene072196.t1 AT1G75890 42.675 314 178 2 31 343 75 387 3.83e-87 268
MS.gene072196.t1 AT2G40250 40.625 320 181 4 30 343 34 350 7.60e-87 266
MS.gene072196.t1 AT2G30220 40.947 359 194 9 4 351 1 352 8.61e-87 266
MS.gene072196.t1 AT1G58430 40.774 336 190 7 9 337 8 341 4.49e-86 264
MS.gene072196.t1 AT1G58520 42.368 321 168 6 30 347 28 334 2.80e-85 261
MS.gene072196.t1 AT1G58525 42.368 321 168 6 30 347 28 334 2.80e-85 261
MS.gene072196.t1 AT2G31540 39.828 349 193 8 9 346 8 350 2.92e-85 262
MS.gene072196.t1 AT2G24560 40.597 335 191 6 9 337 8 340 8.30e-84 259
MS.gene072196.t1 AT1G75890 40.979 327 178 3 31 343 46 371 1.23e-83 259
MS.gene072196.t1 AT3G43570 39.003 341 169 6 9 347 9 312 1.30e-80 249
MS.gene072196.t1 AT5G63170 41.613 310 166 3 30 338 26 321 1.49e-79 247
MS.gene072196.t1 AT5G45950 38.679 318 188 5 30 347 38 348 2.13e-79 247
MS.gene072196.t1 AT1G20132 37.658 316 196 1 31 346 60 374 2.25e-74 235
MS.gene072196.t1 AT1G23500 40.729 329 179 4 24 351 27 340 5.46e-70 223
MS.gene072196.t1 AT1G20130 35.843 332 199 3 26 347 178 505 6.13e-69 225
MS.gene072196.t1 AT1G20130 35.843 332 199 3 26 347 198 525 9.35e-69 225
MS.gene072196.t1 AT1G75920 35.838 346 209 2 4 347 1 335 4.43e-68 218
MS.gene072196.t1 AT1G20135 36.873 339 196 6 1 338 1 322 2.73e-67 215
MS.gene072196.t1 AT3G43550 38.596 285 166 4 10 291 8 286 1.24e-66 212
MS.gene072196.t1 AT1G73610 36.335 322 189 3 27 347 30 336 3.58e-66 213
MS.gene072196.t1 AT2G24560 38.014 292 175 4 9 294 8 299 2.65e-64 207
MS.gene072196.t1 AT3G04290 34.195 348 220 7 4 347 1 343 3.13e-63 206
MS.gene072196.t1 AT1G75920 34.366 355 205 3 10 347 2 345 4.65e-63 205
MS.gene072196.t1 AT1G29670 36.283 339 202 10 11 343 10 340 4.86e-61 200
MS.gene072196.t1 AT1G75910 34.294 347 213 4 4 347 1 335 9.09e-61 199
MS.gene072196.t1 AT1G29670 36.283 339 202 10 11 343 78 408 3.05e-60 200
MS.gene072196.t1 AT5G15720 37.346 324 190 9 29 345 27 344 4.18e-60 197
MS.gene072196.t1 AT4G10950 31.611 329 202 6 29 346 68 384 4.52e-60 199
MS.gene072196.t1 AT2G23540 34.639 332 207 6 32 355 48 377 6.76e-60 197
MS.gene072196.t1 AT5G33370 33.438 320 204 7 32 347 30 344 1.95e-57 191
MS.gene072196.t1 AT4G28780 31.700 347 229 7 9 351 7 349 3.48e-57 190
MS.gene072196.t1 AT4G10950 31.307 329 199 7 29 346 68 380 3.62e-57 191
MS.gene072196.t1 AT3G50400 33.613 357 225 8 9 355 10 364 3.67e-57 190
MS.gene072196.t1 AT1G75930 33.333 348 215 5 4 347 1 335 5.02e-57 189
MS.gene072196.t1 AT5G08460 33.429 347 217 8 8 343 20 363 9.76e-57 189
MS.gene072196.t1 AT5G37690 33.728 338 211 9 13 346 10 338 1.67e-56 188
MS.gene072196.t1 AT1G71691 37.072 321 189 10 27 343 50 361 1.86e-56 189
MS.gene072196.t1 AT5G18430 32.288 319 211 3 32 347 28 344 2.11e-56 188
MS.gene072196.t1 AT1G29660 35.220 318 196 7 30 343 30 341 5.09e-56 187
MS.gene072196.t1 AT1G75920 32.370 346 190 3 4 347 1 304 3.83e-55 183
MS.gene072196.t1 AT1G53920 34.848 330 201 9 27 350 43 364 3.89e-55 185
MS.gene072196.t1 AT4G18970 34.268 321 202 7 27 343 23 338 3.09e-54 182
MS.gene072196.t1 AT4G18970 34.268 321 202 7 27 343 23 338 9.78e-54 182
MS.gene072196.t1 AT5G41890 32.861 353 213 8 9 347 15 357 3.81e-53 180
MS.gene072196.t1 AT1G71250 34.385 317 201 6 30 343 39 351 5.28e-53 179
MS.gene072196.t1 AT1G33811 35.168 327 198 10 26 343 28 349 5.44e-53 179
MS.gene072196.t1 AT5G37690 33.432 338 204 10 13 346 10 330 8.79e-53 178
MS.gene072196.t1 AT1G75920 34.576 295 180 2 55 347 24 307 9.19e-53 177
MS.gene072196.t1 AT5G45670 32.164 342 222 8 6 342 2 338 3.04e-52 177
MS.gene072196.t1 AT1G74460 34.375 320 193 10 36 347 27 337 8.78e-51 173
MS.gene072196.t1 AT5G55050 32.927 328 204 11 30 347 37 358 4.27e-49 169
MS.gene072196.t1 AT2G19060 35.913 323 178 14 29 342 27 329 5.51e-49 168
MS.gene072196.t1 AT2G31550 37.383 214 122 5 139 346 2 209 7.39e-49 164
MS.gene072196.t1 AT2G19010 31.909 351 211 12 1 343 28 358 5.27e-48 166
MS.gene072196.t1 AT2G19010 32.249 338 202 11 13 343 11 328 9.25e-48 165
MS.gene072196.t1 AT2G19050 33.229 319 190 10 30 343 29 329 1.46e-47 164
MS.gene072196.t1 AT5G40990 32.024 331 213 7 32 355 37 362 4.44e-47 164
MS.gene072196.t1 AT3G14225 31.532 333 216 7 32 355 37 366 2.93e-46 162
MS.gene072196.t1 AT1G53940 31.063 367 232 9 5 355 3 364 3.47e-46 161
MS.gene072196.t1 AT3G14225 32.024 331 213 8 32 355 37 362 9.67e-46 160
MS.gene072196.t1 AT5G15720 37.037 270 159 7 29 291 27 292 3.90e-45 157
MS.gene072196.t1 AT1G71120 32.919 322 200 8 30 346 29 339 4.28e-45 158
MS.gene072196.t1 AT5G33370 32.746 284 175 7 17 291 14 290 1.71e-43 153
MS.gene072196.t1 AT1G71691 36.431 269 160 8 27 291 50 311 1.27e-41 148
MS.gene072196.t1 AT1G53990 28.693 352 219 11 10 344 7 343 2.98e-38 140
MS.gene072196.t1 AT4G16230 36.199 221 133 4 30 245 28 245 5.29e-38 137
MS.gene072196.t1 AT2G19050 31.985 272 174 7 8 277 7 269 9.80e-38 137
MS.gene072196.t1 AT5G15720 32.567 261 166 7 92 345 56 313 3.53e-36 134
MS.gene072196.t1 AT5G14450 28.997 369 217 12 9 347 18 371 6.62e-36 134
MS.gene072196.t1 AT4G30140 28.076 317 207 9 31 344 32 330 3.84e-35 132
MS.gene072196.t1 AT3G05180 30.337 356 203 11 22 347 26 366 1.28e-34 131
MS.gene072196.t1 AT1G53940 30.769 299 191 7 5 291 3 297 2.12e-34 129
MS.gene072196.t1 AT1G71691 33.071 254 159 8 94 343 14 260 2.60e-34 128
MS.gene072196.t1 AT1G28580 29.917 361 215 14 9 347 20 364 8.15e-34 129
MS.gene072196.t1 AT1G28610 30.495 364 208 14 9 347 14 357 1.04e-33 128
MS.gene072196.t1 AT1G54790 27.224 371 230 12 4 347 5 362 2.35e-33 127
MS.gene072196.t1 AT1G28570 29.620 368 221 13 9 347 3 361 3.31e-33 127
MS.gene072196.t1 AT1G09390 28.659 328 205 10 31 343 36 349 1.10e-32 125
MS.gene072196.t1 AT1G28650 28.492 358 228 12 10 347 15 364 1.96e-32 125
MS.gene072196.t1 AT2G03980 28.660 321 210 9 31 343 42 351 2.25e-32 124
MS.gene072196.t1 AT2G03980 28.660 321 210 9 31 343 42 351 2.25e-32 124
MS.gene072196.t1 AT2G03980 28.660 321 210 9 31 343 42 351 2.25e-32 124
MS.gene072196.t1 AT2G03980 28.660 321 210 9 31 343 42 351 2.25e-32 124
MS.gene072196.t1 AT4G01130 28.198 383 226 14 3 352 4 370 2.36e-32 125
MS.gene072196.t1 AT1G28640 28.412 359 227 12 10 347 13 362 2.39e-32 125
MS.gene072196.t1 AT2G27360 28.883 367 224 13 9 353 16 367 3.65e-32 124
MS.gene072196.t1 AT1G67830 28.205 351 215 11 23 346 21 361 3.87e-32 124
MS.gene072196.t1 AT1G28600 28.571 364 215 15 9 347 14 357 4.40e-32 124
MS.gene072196.t1 AT3G48460 28.701 331 212 11 33 347 39 361 5.35e-32 124
MS.gene072196.t1 AT1G56670 28.045 353 219 11 9 343 17 352 2.54e-31 122
MS.gene072196.t1 AT1G31550 29.041 365 212 14 9 347 19 362 3.20e-31 122
MS.gene072196.t1 AT1G54030 29.283 321 192 11 23 339 48 337 6.77e-30 119
MS.gene072196.t1 AT1G54020 27.673 318 207 9 30 343 29 327 9.14e-30 117
MS.gene072196.t1 AT3G14220 28.571 329 204 12 31 350 31 337 1.03e-29 117
MS.gene072196.t1 AT1G28670 27.298 359 232 10 10 347 13 363 5.73e-29 115
MS.gene072196.t1 AT1G28590 28.962 366 218 14 10 347 12 363 1.36e-28 115
MS.gene072196.t1 AT1G54010 26.647 334 217 8 30 354 32 346 2.33e-28 114
MS.gene072196.t1 AT1G31550 28.297 364 213 14 9 347 19 359 5.40e-28 113
MS.gene072196.t1 AT1G28660 27.577 359 230 11 10 347 13 362 9.18e-28 112
MS.gene072196.t1 AT3G62280 28.144 334 205 11 31 347 35 350 1.32e-27 111
MS.gene072196.t1 AT1G28660 27.577 359 229 12 10 347 13 361 1.96e-26 108
MS.gene072196.t1 AT1G54000 26.062 353 232 11 11 354 14 346 2.36e-26 108
MS.gene072196.t1 AT3G26430 28.212 358 214 13 12 339 11 355 4.72e-26 107
MS.gene072196.t1 AT1G54790 25.753 365 230 12 10 347 11 361 2.10e-25 105
MS.gene072196.t1 AT2G04020 33.333 201 123 5 31 227 42 235 4.09e-25 102
MS.gene072196.t1 AT2G04020 33.831 201 122 6 31 227 42 235 7.07e-25 103
MS.gene072196.t1 AT3G27950 26.415 371 235 13 6 352 4 360 2.26e-24 102
MS.gene072196.t1 AT4G01130 26.644 289 173 9 96 352 3 284 4.98e-22 95.1
MS.gene072196.t1 AT5G03610 26.266 316 200 10 33 336 44 338 5.01e-21 93.2
MS.gene072196.t1 AT3G09930 27.848 316 196 12 33 336 40 335 5.08e-21 93.2
MS.gene072196.t1 AT3G09930 27.848 316 196 12 33 336 40 335 5.08e-21 93.2
MS.gene072196.t1 AT5G45910 27.059 340 217 12 32 347 30 362 9.22e-21 92.8
MS.gene072196.t1 AT3G14210 27.607 326 198 14 32 343 36 337 1.32e-20 92.4
MS.gene072196.t1 AT1G56670 28.188 298 182 10 9 291 17 297 1.61e-20 90.9
MS.gene072196.t1 AT1G28580 27.368 285 179 11 82 347 8 283 1.71e-20 90.9
MS.gene072196.t1 AT1G54030 30.116 259 150 9 23 277 48 279 1.96e-20 90.9
MS.gene072196.t1 AT1G54790 24.041 391 230 13 10 347 11 387 2.61e-20 91.7
MS.gene072196.t1 AT5G03600 25.575 348 220 14 3 336 14 336 8.96e-19 86.7
MS.gene072196.t1 AT5G03600 26.667 315 198 13 30 336 12 301 1.96e-18 85.5
MS.gene072196.t1 AT4G16220 42.373 118 64 2 1 118 1 114 2.99e-18 83.6
MS.gene072196.t1 AT1G54020 25.194 258 175 6 87 343 1 241 3.31e-17 81.3
MS.gene072196.t1 AT1G54020 25.194 258 175 6 87 343 1 241 3.31e-17 81.3
MS.gene072196.t1 AT1G54020 25.194 258 175 6 87 343 1 241 3.31e-17 81.3
MS.gene072196.t1 AT3G62280 28.736 261 154 10 31 277 35 277 4.28e-17 81.3
MS.gene072196.t1 AT1G54020 28.877 187 127 5 159 343 10 192 6.19e-17 79.7
MS.gene072196.t1 AT5G03980 26.609 233 151 8 131 351 94 318 3.69e-15 75.9
MS.gene072196.t1 AT4G16233 33.333 108 71 1 240 347 6 112 3.97e-15 72.0
MS.gene072196.t1 AT1G28570 25.000 204 133 6 158 347 1 198 6.89e-14 70.9
MS.gene072196.t1 AT1G28570 25.000 204 133 6 158 347 92 289 2.00e-13 70.9
MS.gene072196.t1 AT3G14210 26.126 222 143 8 130 343 1 209 1.03e-11 65.1
MS.gene072196.t1 AT1G28610 32.086 187 96 10 9 180 14 184 1.85e-11 63.9
MS.gene072196.t1 AT1G28600 30.047 213 112 13 8 204 13 204 1.90e-11 63.5

Find 71 sgRNAs with CRISPR-Local

Find 168 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCAAAACCCTTCAAATTT+TGG 0.105456 8.1:+82573273 MS.gene072196:CDS
GAACAAGTTCCTAGTGATTT+TGG 0.126371 8.1:-82573589 None:intergenic
CCTGCTGCAAGGACTTTATT+TGG 0.195553 8.1:+82573102 MS.gene072196:CDS
CTCATTCACAAGCTTTATTA+AGG 0.218846 8.1:+82572873 MS.gene072196:CDS
TATTCTAACTGTTGGGATAA+TGG 0.256406 8.1:-82572670 None:intergenic
GGCAAGTTGGCTCAGGTTGC+TGG 0.317149 8.1:+82572709 MS.gene072196:CDS
ATGCAACTCAGTATGTGTTT+TGG 0.323360 8.1:+82573614 MS.gene072196:CDS
GGATTAGGAGCTAGGAAAAT+TGG 0.330733 8.1:+82573048 MS.gene072196:CDS
GCTGATAACTTAATTATTGC+CGG 0.335224 8.1:+82573676 MS.gene072196:CDS
AACTTTGCTTCAGCTGCATC+TGG 0.352556 8.1:+82572021 MS.gene072196:CDS
TCAGGTTGCTGGCAGTAAAA+AGG 0.357625 8.1:+82572720 MS.gene072196:CDS
AAGGCTAATTACCCTCCTTA+TGG 0.370041 8.1:+82571363 MS.gene072196:CDS
ACGCAGGGCGTGTATGGATT+AGG 0.377710 8.1:+82573033 MS.gene072196:intron
AGCTTGTGAATGAGTCTAAC+AGG 0.386460 8.1:-82572864 None:intergenic
TCAGGGAAGAACCTCCTTCT+TGG 0.388520 8.1:+82571994 MS.gene072196:CDS
AATCTTCAAAAGCAACTTCC+TGG 0.397330 8.1:+82573204 MS.gene072196:CDS
TATCTTAGTCCACAGGCATC+AGG 0.401048 8.1:+82571976 MS.gene072196:CDS
CCTTGAAATATTCTAACTGT+TGG 0.403529 8.1:-82572678 None:intergenic
GTACCAGCTATCATAACATT+TGG 0.405659 8.1:+82571291 MS.gene072196:CDS
GTTGAAACGCAGGGCGTGTA+TGG 0.408582 8.1:+82573027 MS.gene072196:intron
CTTGAAATATTCTAACTGTT+GGG 0.411275 8.1:-82572677 None:intergenic
GGGAAAGGGTGCTGTGGTAC+AGG 0.417817 8.1:+82573535 MS.gene072196:CDS
GTGCAAAGCTACCACAAGTT+AGG 0.425459 8.1:-82571257 None:intergenic
GTGACCTCACTTCCACCATT+GGG 0.427280 8.1:+82573072 MS.gene072196:CDS
AGTGACCTCACTTCCACCAT+TGG 0.432684 8.1:+82573071 MS.gene072196:CDS
TTAGTAAAATCTCTACCATA+AGG 0.435286 8.1:-82571378 None:intergenic
CCAACAGTTAGAATATTTCA+AGG 0.438731 8.1:+82572678 MS.gene072196:CDS
AAAATTATTATACCAATCCT+TGG 0.441731 8.1:+82572803 MS.gene072196:CDS
TTTACTAATAAACAACCTAC+TGG 0.460660 8.1:+82571393 MS.gene072196:CDS
TTATTTGGTTACCATGAGAA+TGG 0.467168 8.1:+82573117 MS.gene072196:CDS
TGGTGCGTACCAAAATTTGA+AGG 0.471396 8.1:-82573282 None:intergenic
TCTTTGTATGTATTGAGTGC+TGG 0.485192 8.1:+82572763 MS.gene072196:CDS
GGCATAGCTCTTATCACATA+AGG 0.485525 8.1:+82573697 MS.gene072196:CDS
TGCATCTGGTTATGATGAAA+AGG 0.486563 8.1:+82572035 MS.gene072196:CDS
GAATATTTCAAGGAATATCA+AGG 0.486768 8.1:+82572688 MS.gene072196:CDS
TCACCAAATGTTATGATAGC+TGG 0.498295 8.1:-82571294 None:intergenic
CCAAATAAAGTCCTTGCAGC+AGG 0.504382 8.1:-82573102 None:intergenic
GCGTGTATGGATTAGGAGCT+AGG 0.512696 8.1:+82573040 MS.gene072196:CDS
AAAGGCTGCATCTATTATCA+AGG 0.521328 8.1:+82572738 MS.gene072196:CDS
CAAGGAATATCAAGGCAAGT+TGG 0.527876 8.1:+82572696 MS.gene072196:CDS
ATATCAAGGCAAGTTGGCTC+AGG 0.531855 8.1:+82572702 MS.gene072196:CDS
TTATGTGATAAGAGCTATGC+CGG 0.533000 8.1:-82573695 None:intergenic
GGTGACTCTGCAGTAGATGT+AGG 0.538565 8.1:+82571312 MS.gene072196:CDS
GCCTGTGGACTAAGATATGC+AGG 0.541888 8.1:-82571970 None:intergenic
TGCTTGGTTGATCCAAGGAT+TGG 0.542337 8.1:-82572815 None:intergenic
ACTGATCAACAGTGATTGCT+TGG 0.542659 8.1:-82572831 None:intergenic
TTGCAATGGCAAGTTAGCTA+CGG 0.548669 8.1:+82571422 MS.gene072196:CDS
GTGATTGCTTGGTTGATCCA+AGG 0.549428 8.1:-82572820 None:intergenic
GTATCTTGCTTCCTAACTTG+TGG 0.552323 8.1:+82571246 MS.gene072196:CDS
AGGTTCTTCCCTGATGCCTG+TGG 0.556382 8.1:-82571985 None:intergenic
TGGGTTGCCTACCTGCTGCA+AGG 0.568781 8.1:+82573091 MS.gene072196:CDS
AAGCAAAGTTAGCACCAAGA+AGG 0.572551 8.1:-82572008 None:intergenic
ACCTGCATATCTTAGTCCAC+AGG 0.573584 8.1:+82571969 MS.gene072196:CDS
ACTTGATTAGCAGCTTCTGA+AGG 0.575330 8.1:-82573649 None:intergenic
TTGCGACACAACCATTCTCA+TGG 0.578404 8.1:-82573128 None:intergenic
GTAAAATCTCTACCATAAGG+AGG 0.579599 8.1:-82571375 None:intergenic
GGTGCGTACCAAAATTTGAA+GGG 0.585465 8.1:-82573281 None:intergenic
ATCTTAGTCCACAGGCATCA+GGG 0.598385 8.1:+82571977 MS.gene072196:CDS
GCAGGTAGGCAACCCAATGG+TGG 0.601772 8.1:-82573084 None:intergenic
TTGTGCAATCCAAAATCACT+AGG 0.603517 8.1:+82573580 MS.gene072196:CDS
CAAAGTTAGCACCAAGAAGG+AGG 0.606423 8.1:-82572005 None:intergenic
TAAAATCTCTACCATAAGGA+GGG 0.614379 8.1:-82571374 None:intergenic
CCATTGCAAAACCTCCCAGT+AGG 0.621346 8.1:-82571408 None:intergenic
TTACTAATAAACAACCTACT+GGG 0.623210 8.1:+82571394 MS.gene072196:CDS
GCAACCCAATGGTGGAAGTG+AGG 0.623756 8.1:-82573076 None:intergenic
AGAATCAACACTGATGCACA+AGG 0.629785 8.1:+82573150 MS.gene072196:CDS
AAAATCACAATCTTTAGACC+AGG 0.647895 8.1:-82573222 None:intergenic
CTAATAAACAACCTACTGGG+AGG 0.651293 8.1:+82571397 MS.gene072196:CDS
GCAGCAGGTAGGCAACCCAA+TGG 0.651520 8.1:-82573087 None:intergenic
GAGGCAGGGAAAGGGTGCTG+TGG 0.662542 8.1:+82573529 MS.gene072196:CDS
ATAAAGTCCTTGCAGCAGGT+AGG 0.698601 8.1:-82573098 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAGTTTTTTTCAATTA+AGG + chr8.1:82572274-82572293 MS.gene072196:intron 10.0%
!! AAAAATTTGATATACTACTT+AGG - chr8.1:82572951-82572970 None:intergenic 15.0%
!! AGTTCAAACATAATATATAT+AGG - chr8.1:82572578-82572597 None:intergenic 15.0%
!! GTTTACAATTAGTTATTAAA+TGG + chr8.1:82572510-82572529 MS.gene072196:intron 15.0%
!! AAAATTATTATACCAATCCT+TGG + chr8.1:82572803-82572822 MS.gene072196:CDS 20.0%
!! ACATATTTCAGTTTATCTAA+TGG - chr8.1:82572977-82572996 None:intergenic 20.0%
!! ACTATTTGAATTAAGCTATA+AGG + chr8.1:82572337-82572356 MS.gene072196:intron 20.0%
!! CTATATAGAACATCATAAAA+AGG - chr8.1:82573501-82573520 None:intergenic 20.0%
!! GTATTGTATCCTTTATTATA+TGG + chr8.1:82571496-82571515 MS.gene072196:intron 20.0%
!! TGCAATAACAAAATCAATTT+AGG - chr8.1:82573338-82573357 None:intergenic 20.0%
!!! ACTAGTTTATAAGTATGAAA+TGG + chr8.1:82572226-82572245 MS.gene072196:intron 20.0%
!!! CTTTTTATGATGTTCTATAT+AGG + chr8.1:82573499-82573518 MS.gene072196:intron 20.0%
!!! TTTTGTTATGAACTTGTTTT+TGG + chr8.1:82572621-82572640 MS.gene072196:intron 20.0%
! AAATGTATCGTAGATTTGAT+TGG + chr8.1:82571657-82571676 MS.gene072196:intron 25.0%
! AACGACTAAGATTTATTTGA+AGG + chr8.1:82571603-82571622 MS.gene072196:intron 25.0%
! AAGCTATAAGTTCAAATATG+TGG + chr8.1:82572370-82572389 MS.gene072196:intron 25.0%
! ACGACTAAGATTTATTTGAA+GGG + chr8.1:82571604-82571623 MS.gene072196:intron 25.0%
! CATATAAGTTTCATTGATGT+TGG + chr8.1:82571901-82571920 MS.gene072196:intron 25.0%
! CTTGAAATATTCTAACTGTT+GGG - chr8.1:82572680-82572699 None:intergenic 25.0%
! GAATATTTCAAGGAATATCA+AGG + chr8.1:82572688-82572707 MS.gene072196:CDS 25.0%
! TATTATCTTGTCCTTATGTT+GGG - chr8.1:82573446-82573465 None:intergenic 25.0%
! TGTTTGAACTTATATCTGTT+TGG + chr8.1:82572588-82572607 MS.gene072196:intron 25.0%
! TTACTAATAAACAACCTACT+GGG + chr8.1:82571394-82571413 MS.gene072196:CDS 25.0%
! TTAGTAAAATCTCTACCATA+AGG - chr8.1:82571381-82571400 None:intergenic 25.0%
! TTATTATCTTGTCCTTATGT+TGG - chr8.1:82573447-82573466 None:intergenic 25.0%
! TTCAAATAAATCTTAGTCGT+TGG - chr8.1:82571604-82571623 None:intergenic 25.0%
! TTTACTAATAAACAACCTAC+TGG + chr8.1:82571393-82571412 MS.gene072196:CDS 25.0%
!!! CCACTTTTATCTCAAATTAA+CGG + chr8.1:82573302-82573321 MS.gene072196:intron 25.0%
!!! GTAGAGTTTTGTAAAATTAG+CGG + chr8.1:82572199-82572218 MS.gene072196:intron 25.0%
!!! TAATTAGCCTTAAAAAGAGT+AGG - chr8.1:82571354-82571373 None:intergenic 25.0%
!!! TTTTTCAATTAAGGCTACAA+GGG + chr8.1:82572283-82572302 MS.gene072196:intron 25.0%
!!! TTTTTTCAATTAAGGCTACA+AGG + chr8.1:82572282-82572301 MS.gene072196:intron 25.0%
AAAATCACAATCTTTAGACC+AGG - chr8.1:82573225-82573244 None:intergenic 30.0%
ACATTGAGATTTCAATGAAG+AGG - chr8.1:82571531-82571550 None:intergenic 30.0%
CATAAGGACAAGATAATAAC+TGG + chr8.1:82573448-82573467 MS.gene072196:intron 30.0%
CATGGAAGACCATATAATAA+AGG - chr8.1:82571508-82571527 None:intergenic 30.0%
CCAACAGTTAGAATATTTCA+AGG + chr8.1:82572678-82572697 MS.gene072196:CDS 30.0%
CCACTATAAGCTAACTTATT+AGG - chr8.1:82572143-82572162 None:intergenic 30.0%
CCTTGAAATATTCTAACTGT+TGG - chr8.1:82572681-82572700 None:intergenic 30.0%
CGACTAAGATTTATTTGAAG+GGG + chr8.1:82571605-82571624 MS.gene072196:intron 30.0%
CTTCATTGAAATCTCAATGT+TGG + chr8.1:82571531-82571550 MS.gene072196:intron 30.0%
GAATTAAGCTATAAGGCATA+AGG + chr8.1:82572344-82572363 MS.gene072196:intron 30.0%
GCTGATAACTTAATTATTGC+CGG + chr8.1:82573676-82573695 MS.gene072196:CDS 30.0%
GCTTTCTTTCTTAAATCTAG+TGG + chr8.1:82571793-82571812 MS.gene072196:intron 30.0%
TAAAATCTCTACCATAAGGA+GGG - chr8.1:82571377-82571396 None:intergenic 30.0%
TAAGATTTATTTGAAGGGGA+TGG + chr8.1:82571609-82571628 MS.gene072196:intron 30.0%
TAATATGAACTGTCTGATCT+TGG + chr8.1:82573358-82573377 MS.gene072196:intron 30.0%
TATTCTAACTGTTGGGATAA+TGG - chr8.1:82572673-82572692 None:intergenic 30.0%
TCAACAAAGAACCAACATTA+GGG - chr8.1:82573012-82573031 None:intergenic 30.0%
TTATTTGGTTACCATGAGAA+TGG + chr8.1:82573117-82573136 MS.gene072196:CDS 30.0%
TTCAACAAAGAACCAACATT+AGG - chr8.1:82573013-82573032 None:intergenic 30.0%
! AAATCAATTTAGGATGACCT+CGG - chr8.1:82573328-82573347 None:intergenic 30.0%
! CCGTTAATTTGAGATAAAAG+TGG - chr8.1:82573305-82573324 None:intergenic 30.0%
! CCTAATAAGTTAGCTTATAG+TGG + chr8.1:82572140-82572159 MS.gene072196:intron 30.0%
! GTTCAAAACCCTTCAAATTT+TGG + chr8.1:82573273-82573292 MS.gene072196:CDS 30.0%
! TTACCTTCCTACTCTTTTTA+AGG + chr8.1:82571344-82571363 MS.gene072196:CDS 30.0%
!! CTCATTCACAAGCTTTATTA+AGG + chr8.1:82572873-82572892 MS.gene072196:CDS 30.0%
!! TCAATGTTGGTTTAACCTAA+CGG + chr8.1:82571544-82571563 MS.gene072196:intron 30.0%
!!! AATTTGAAGGGTTTTGAACA+AGG - chr8.1:82573272-82573291 None:intergenic 30.0%
!!! TGTTTTTGGTTTCTTCCTAT+TGG + chr8.1:82572635-82572654 MS.gene072196:intron 30.0%
AAAGGCTGCATCTATTATCA+AGG + chr8.1:82572738-82572757 MS.gene072196:CDS 35.0%
AATCTTCAAAAGCAACTTCC+TGG + chr8.1:82573204-82573223 MS.gene072196:CDS 35.0%
AATGCAAACAACCCTAATGT+TGG + chr8.1:82572998-82573017 MS.gene072196:intron 35.0%
ACGATACATTTCCACAAGAT+TGG - chr8.1:82571716-82571697 None:intergenic 35.0%
AGGAGAAATCAAGTTACTAG+AGG - chr8.1:82572558-82572577 None:intergenic 35.0%
AGTTTCAATAAGGGTCAGTT+TGG - chr8.1:82572400-82572419 None:intergenic 35.0%
CGATACATTTCCACAAGATT+TGG + chr8.1:82571698-82571717 MS.gene072196:intron 35.0%
GAATTGAAATATCAGCCGTT+AGG - chr8.1:82571562-82571581 None:intergenic 35.0%
GCGTATCTCTCTAAATGTAA+CGG - chr8.1:82571775-82571794 None:intergenic 35.0%
GTAAAATCTCTACCATAAGG+AGG - chr8.1:82571378-82571397 None:intergenic 35.0%
GTACCAGCTATCATAACATT+TGG + chr8.1:82571291-82571310 MS.gene072196:CDS 35.0%
GTGGAAATGTATCGTAGATT+TGG - chr8.1:82571672-82571653 None:intergenic 35.0%
TCACCAAATGTTATGATAGC+TGG - chr8.1:82571297-82571316 None:intergenic 35.0%
TCTTTGTATGTATTGAGTGC+TGG + chr8.1:82572763-82572782 MS.gene072196:CDS 35.0%
TGCATCTGGTTATGATGAAA+AGG + chr8.1:82572035-82572054 MS.gene072196:CDS 35.0%
TTATGTGATAAGAGCTATGC+CGG - chr8.1:82573698-82573717 None:intergenic 35.0%
TTGTGCAATCCAAAATCACT+AGG + chr8.1:82573580-82573599 MS.gene072196:CDS 35.0%
TTTATTTGAAGGGGATGGAA+AGG + chr8.1:82571614-82571633 MS.gene072196:intron 35.0%
! AAGATTTGGTTGAATGGACT+TGG + chr8.1:82571712-82571731 MS.gene072196:intron 35.0%
! AAGTTAGCTACGGATTTTAC+AGG + chr8.1:82571432-82571451 MS.gene072196:CDS 35.0%
! ACGGCTTGATAGTTTCAATA+AGG - chr8.1:82572410-82572429 None:intergenic 35.0%
! ATGCAACTCAGTATGTGTTT+TGG + chr8.1:82573614-82573633 MS.gene072196:CDS 35.0%
! CGGCTTGATAGTTTCAATAA+GGG - chr8.1:82572409-82572428 None:intergenic 35.0%
! GAACAAGTTCCTAGTGATTT+TGG - chr8.1:82573592-82573611 None:intergenic 35.0%
! GATCCTCTTCATCTGAAATA+CGG - chr8.1:82571836-82571855 None:intergenic 35.0%
! GTTCTATATAGGTTTTGCTG+AGG + chr8.1:82573510-82573529 MS.gene072196:intron 35.0%
! TAGCCTTAAAAAGAGTAGGA+AGG - chr8.1:82571350-82571369 None:intergenic 35.0%
! TGCAACTCAGTATGTGTTTT+GGG + chr8.1:82573615-82573634 MS.gene072196:CDS 35.0%
! TTCCACAAGATTTGGTTGAA+TGG + chr8.1:82571706-82571725 MS.gene072196:intron 35.0%
! TTTTGAACAAGGTCAAAGAG+AGG - chr8.1:82573261-82573280 None:intergenic 35.0%
!!! AATGTTTTTTCTCCACTGCA+CGG + chr8.1:82573411-82573430 MS.gene072196:intron 35.0%
AAGCAAAGTTAGCACCAAGA+AGG - chr8.1:82572011-82572030 None:intergenic 40.0%
AAGGCTAATTACCCTCCTTA+TGG + chr8.1:82571363-82571382 MS.gene072196:CDS 40.0%
ACTGATCAACAGTGATTGCT+TGG - chr8.1:82572834-82572853 None:intergenic 40.0%
ACTTGATTAGCAGCTTCTGA+AGG - chr8.1:82573652-82573671 None:intergenic 40.0%
AGAATCAACACTGATGCACA+AGG + chr8.1:82573150-82573169 MS.gene072196:CDS 40.0%
AGCTTGTGAATGAGTCTAAC+AGG - chr8.1:82572867-82572886 None:intergenic 40.0%
CAAGGAATATCAAGGCAAGT+TGG + chr8.1:82572696-82572715 MS.gene072196:CDS 40.0%
CATTTCCACAAGATTGGACT+TGG - chr8.1:82571642-82571661 None:intergenic 40.0%
CTAATAAACAACCTACTGGG+AGG + chr8.1:82571397-82571416 MS.gene072196:CDS 40.0%
GACGTTATTTAAGTCGTGCT+TGG + chr8.1:82572101-82572120 MS.gene072196:intron 40.0%
GAGATTTCAATGAAGAGGCA+TGG - chr8.1:82571526-82571545 None:intergenic 40.0%
GGATTAGGAGCTAGGAAAAT+TGG + chr8.1:82573048-82573067 MS.gene072196:CDS 40.0%
GGTGCGTACCAAAATTTGAA+GGG - chr8.1:82573284-82573303 None:intergenic 40.0%
GTATCTTGCTTCCTAACTTG+TGG + chr8.1:82571246-82571265 MS.gene072196:CDS 40.0%
GTCCATTCAACCAAATCTTG+TGG - chr8.1:82571711-82571730 None:intergenic 40.0%
TGGTGCGTACCAAAATTTGA+AGG - chr8.1:82573285-82573304 None:intergenic 40.0%
TGGTTCTTTGTTGAAACGCA+GGG + chr8.1:82573018-82573037 MS.gene072196:intron 40.0%
TTATCTCAAATTAACGGCCG+AGG + chr8.1:82573308-82573327 MS.gene072196:intron 40.0%
TTGCAATGGCAAGTTAGCTA+CGG + chr8.1:82571422-82571441 MS.gene072196:CDS 40.0%
! ATATAGGTTTTGCTGAGGCA+GGG + chr8.1:82573515-82573534 MS.gene072196:intron 40.0%
! CTTTTGCAGCTGAAACACTT+GGG + chr8.1:82571932-82571951 MS.gene072196:intron 40.0%
! TATATAGGTTTTGCTGAGGC+AGG + chr8.1:82573514-82573533 MS.gene072196:intron 40.0%
! TCTTTTGCAGCTGAAACACT+TGG + chr8.1:82571931-82571950 MS.gene072196:intron 40.0%
! TTGGTTCTTTGTTGAAACGC+AGG + chr8.1:82573017-82573036 MS.gene072196:intron 40.0%
!! AAATACGGTGCTACAGCAAT+AGG - chr8.1:82571821-82571840 None:intergenic 40.0%
!! AATACGGTGCTACAGCAATA+GGG - chr8.1:82571820-82571839 None:intergenic 40.0%
!! TATAGTGGATGAGCTGATAG+CGG + chr8.1:82572155-82572174 MS.gene072196:intron 40.0%
AACTTTGCTTCAGCTGCATC+TGG + chr8.1:82572021-82572040 MS.gene072196:CDS 45.0%
ACCTGCATATCTTAGTCCAC+AGG + chr8.1:82571969-82571988 MS.gene072196:CDS 45.0%
AGGATCCAAGTCCAATCTTG+TGG + chr8.1:82571634-82571653 MS.gene072196:intron 45.0%
ATAAAGTCCTTGCAGCAGGT+AGG - chr8.1:82573101-82573120 None:intergenic 45.0%
ATCCAAGTCCTACCTAAGGT+TGG + chr8.1:82571853-82571872 MS.gene072196:intron 45.0%
ATCTTAGTCCACAGGCATCA+GGG + chr8.1:82571977-82571996 MS.gene072196:CDS 45.0%
CAAAGTTAGCACCAAGAAGG+AGG - chr8.1:82572008-82572027 None:intergenic 45.0%
CATCTACTCCAACCTTAGGT+AGG - chr8.1:82571864-82571883 None:intergenic 45.0%
CCAAATAAAGTCCTTGCAGC+AGG - chr8.1:82573105-82573124 None:intergenic 45.0%
CCTGCTGCAAGGACTTTATT+TGG + chr8.1:82573102-82573121 MS.gene072196:CDS 45.0%
GCAACATCTACTCCAACCTT+AGG - chr8.1:82571868-82571887 None:intergenic 45.0%
GCACCGTATTTCAGATGAAG+AGG + chr8.1:82571830-82571849 MS.gene072196:intron 45.0%
GGTATTCGGATCCCAACATA+AGG + chr8.1:82573432-82573451 MS.gene072196:intron 45.0%
GTGATTGCTTGGTTGATCCA+AGG - chr8.1:82572823-82572842 None:intergenic 45.0%
GTGCAAAGCTACCACAAGTT+AGG - chr8.1:82571260-82571279 None:intergenic 45.0%
TAACAACGCTGCTGGTATAG+AGG - chr8.1:82571740-82571759 None:intergenic 45.0%
TATCTTAGTCCACAGGCATC+AGG + chr8.1:82571976-82571995 MS.gene072196:CDS 45.0%
TGCTTGGTTGATCCAAGGAT+TGG - chr8.1:82572818-82572837 None:intergenic 45.0%
TGGAATTGCATGCTGCCAAT+AGG - chr8.1:82572653-82572672 None:intergenic 45.0%
TTGCGACACAACCATTCTCA+TGG - chr8.1:82573131-82573150 None:intergenic 45.0%
TTTCTCCACTGCACGGTATT+CGG + chr8.1:82573418-82573437 MS.gene072196:intron 45.0%
! ATATCAAGGCAAGTTGGCTC+AGG + chr8.1:82572702-82572721 MS.gene072196:CDS 45.0%
! TCAGGTTGCTGGCAGTAAAA+AGG + chr8.1:82572720-82572739 MS.gene072196:CDS 45.0%
! TTACGCGCAGTTTTCGATCT+CGG - chr8.1:82573392-82573411 None:intergenic 45.0%
!!! AATTTTCAAAAAAATTAAAA+CGG - chr8.1:82572429-82572448 None:intergenic 5.0%
AGCAGCGTTGTTACAGCTGT+AGG + chr8.1:82571747-82571766 MS.gene072196:intron 50.0%
AGTGACCTCACTTCCACCAT+TGG + chr8.1:82573071-82573090 MS.gene072196:CDS 50.0%
CCATTGCAAAACCTCCCAGT+AGG - chr8.1:82571411-82571430 None:intergenic 50.0%
CTCCAACCTTAGGTAGGACT+TGG - chr8.1:82571858-82571877 None:intergenic 50.0%
GAGGATCCAAGTCCTACCTA+AGG + chr8.1:82571849-82571868 MS.gene072196:intron 50.0%
GGTGACTCTGCAGTAGATGT+AGG + chr8.1:82571312-82571331 MS.gene072196:CDS 50.0%
GTGACCTCACTTCCACCATT+GGG + chr8.1:82573072-82573091 MS.gene072196:CDS 50.0%
TACAGCTGTAACAACGCTGC+TGG - chr8.1:82571748-82571767 None:intergenic 50.0%
TCAGGGAAGAACCTCCTTCT+TGG + chr8.1:82571994-82572013 MS.gene072196:CDS 50.0%
! CCTACTGGGAGGTTTTGCAA+TGG + chr8.1:82571408-82571427 MS.gene072196:CDS 50.0%
! GCCTGTGGACTAAGATATGC+AGG - chr8.1:82571973-82571992 None:intergenic 50.0%
! GTTTTGCTGAGGCAGGGAAA+GGG + chr8.1:82573521-82573540 MS.gene072196:CDS 50.0%
!! GCGTGTATGGATTAGGAGCT+AGG + chr8.1:82573040-82573059 MS.gene072196:CDS 50.0%
ACGCAGGGCGTGTATGGATT+AGG + chr8.1:82573033-82573052 MS.gene072196:intron 55.0%
AGGTTCTTCCCTGATGCCTG+TGG - chr8.1:82571988-82572007 None:intergenic 55.0%
GTTGAAACGCAGGGCGTGTA+TGG + chr8.1:82573027-82573046 MS.gene072196:intron 55.0%
! GCAACCCAATGGTGGAAGTG+AGG - chr8.1:82573079-82573098 None:intergenic 55.0%
! GGTTTTGCTGAGGCAGGGAA+AGG + chr8.1:82573520-82573539 MS.gene072196:intron 55.0%
GCAGCAGGTAGGCAACCCAA+TGG - chr8.1:82573090-82573109 None:intergenic 60.0%
GCAGGTAGGCAACCCAATGG+TGG - chr8.1:82573087-82573106 None:intergenic 60.0%
GGGATCCGAATACCGTGCAG+TGG - chr8.1:82573426-82573445 None:intergenic 60.0%
TGGGTTGCCTACCTGCTGCA+AGG + chr8.1:82573091-82573110 MS.gene072196:CDS 60.0%
! GGCAAGTTGGCTCAGGTTGC+TGG + chr8.1:82572709-82572728 MS.gene072196:CDS 60.0%
!! GGGAAAGGGTGCTGTGGTAC+AGG + chr8.1:82573535-82573554 MS.gene072196:CDS 60.0%
!! GAGGCAGGGAAAGGGTGCTG+TGG + chr8.1:82573529-82573548 MS.gene072196:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 82571204 82573717 82571204 ID=MS.gene072196
chr8.1 mRNA 82571204 82573717 82571204 ID=MS.gene072196.t1;Parent=MS.gene072196
chr8.1 exon 82571204 82571453 82571204 ID=MS.gene072196.t1.exon1;Parent=MS.gene072196.t1
chr8.1 CDS 82571204 82571453 82571204 ID=cds.MS.gene072196.t1;Parent=MS.gene072196.t1
chr8.1 exon 82571941 82572071 82571941 ID=MS.gene072196.t1.exon2;Parent=MS.gene072196.t1
chr8.1 CDS 82571941 82572071 82571941 ID=cds.MS.gene072196.t1;Parent=MS.gene072196.t1
chr8.1 exon 82572661 82572894 82572661 ID=MS.gene072196.t1.exon3;Parent=MS.gene072196.t1
chr8.1 CDS 82572661 82572894 82572661 ID=cds.MS.gene072196.t1;Parent=MS.gene072196.t1
chr8.1 exon 82573039 82573294 82573039 ID=MS.gene072196.t1.exon4;Parent=MS.gene072196.t1
chr8.1 CDS 82573039 82573294 82573039 ID=cds.MS.gene072196.t1;Parent=MS.gene072196.t1
chr8.1 exon 82573521 82573717 82573521 ID=MS.gene072196.t1.exon5;Parent=MS.gene072196.t1
chr8.1 CDS 82573521 82573717 82573521 ID=cds.MS.gene072196.t1;Parent=MS.gene072196.t1
Gene Sequence

>MS.gene072196

ATGAAGAACATGAATAGCAAACAAACACTTGTTCTACTCATAGTATCTTGCTTCCTAACTTGTGGTAGCTTTGCACAAGATACACTTGTACCAGCTATCATAACATTTGGTGACTCTGCAGTAGATGTAGGAAATAATGATTACCTTCCTACTCTTTTTAAGGCTAATTACCCTCCTTATGGTAGAGATTTTACTAATAAACAACCTACTGGGAGGTTTTGCAATGGCAAGTTAGCTACGGATTTTACAGGTAAATATTGCATCAAACTAATTAGATATTGTGTTTATTGTTGTATTGTATCCTTTATTATATGGTCTTCCATGCCTCTTCATTGAAATCTCAATGTTGGTTTAACCTAACGGCTGATATTTCAATTCTCTCAGCTATTAGATTAATCCAACGACTAAGATTTATTTGAAGGGGATGGAAAGGATCCAAGTCCAATCTTGTGGAAATGTATCGTAGATTTGATTGGATTACACTACCAAATCTACGATACATTTCCACAAGATTTGGTTGAATGGACTTGGATCCTCTATACCAGCAGCGTTGTTACAGCTGTAGGAACCGTTACATTTAGAGAGATACGCTTTCTTTCTTAAATCTAGTGGTCCCTATTGCTGTAGCACCGTATTTCAGATGAAGAGGATCCAAGTCCTACCTAAGGTTGGAGTAGATGTTGCACATATACTCACGCATATAAGTTTCATTGATGTTGGAATGTTTTCTTTTGCAGCTGAAACACTTGGGTTTACGAGTTTTGCACCTGCATATCTTAGTCCACAGGCATCAGGGAAGAACCTCCTTCTTGGTGCTAACTTTGCTTCAGCTGCATCTGGTTATGATGAAAAGGCTGCTACGTTGAATGTAAGTTTGTGATTACAATATATTCATTTGACGTTATTTAAGTCGTGCTTGGTAAAAAATAGTGAATACCTAATAAGTTAGCTTATAGTGGATGAGCTGATAGCGGATAAGCTAACTGATTAAGTTTGTAGAGTTTTGTAAAATTAGCGGTTGAACTAGTTTATAAGTATGAAATGGCATAAATAAGATATATTTATTTTATAATTTAGTTTTTTTCAATTAAGGCTACAAGGGTAAAATTGAAATAAAAAATGATAAACAATAAACTATTTGAATTAAGCTATAAGGCATAAGGCATAAGCTATAAGTTCAAATATGTGGCTTGCCAAACTGACCCTTATTGAAACTATCAAGCCGTTTTAATTTTTTTGAAAATTTGTGTAGTTTATCTATTCAATTAGAAGTTTTTGTTTGACAGTAAGATCGACGAAATCTATTGTTTACAATTAGTTATTAAATGGAGTAACTCAGTTTAAATTTACTCCTCTAGTAACTTGATTTCTCCTATATATATTATGTTTGAACTTATATCTGTTTGGAATGAAAATGTTTTGTTATGAACTTGTTTTTGGTTTCTTCCTATTGGCAGCATGCAATTCCATTATCCCAACAGTTAGAATATTTCAAGGAATATCAAGGCAAGTTGGCTCAGGTTGCTGGCAGTAAAAAGGCTGCATCTATTATCAAGGATTCTTTGTATGTATTGAGTGCTGGCAGCAGTGACTTTGTACAAAATTATTATACCAATCCTTGGATCAACCAAGCAATCACTGTTGATCAGTATTCATCTTACCTGTTAGACTCATTCACAAGCTTTATTAAGGTATTCTGTTATTGCTATTCGTAGAAAACTCATAAGCGCTTTTCATAATCTCTCCTAAGTAGTATATCAAATTTTTATACCATTAGATAAACTGAAATATGTTAATGCAAACAACCCTAATGTTGGTTCTTTGTTGAAACGCAGGGCGTGTATGGATTAGGAGCTAGGAAAATTGGAGTGACCTCACTTCCACCATTGGGTTGCCTACCTGCTGCAAGGACTTTATTTGGTTACCATGAGAATGGTTGTGTCGCAAGAATCAACACTGATGCACAAGGATTTAACAAGAAAGTCAGCTCAGCTGCATCGAATCTTCAAAAGCAACTTCCTGGTCTAAAGATTGTGATTTTTGATATATACAAACCTCTCTTTGACCTTGTTCAAAACCCTTCAAATTTTGGTACGCACCACTTTTATCTCAAATTAACGGCCGAGGTCATCCTAAATTGATTTTGTTATTGCATAATATGAACTGTCTGATCTTGGATTAGCAGCCGAGATCGAAAACTGCGCGTAAATGTTTTTTCTCCACTGCACGGTATTCGGATCCCAACATAAGGACAAGATAATAACTGGAATTATAATGATGTTTTTTTTTTTTAACCTTTTTATGATGTTCTATATAGGTTTTGCTGAGGCAGGGAAAGGGTGCTGTGGTACAGGTCTTGTAGAAACAACATCATTATTGTGCAATCCAAAATCACTAGGAACTTGTTCTAATGCAACTCAGTATGTGTTTTGGGACAGTGTTCATCCTTCAGAAGCTGCTAATCAAGTTCTAGCTGATAACTTAATTATTGCCGGCATAGCTCTTATCACATAA

Protein sequence

>MS.gene072196.t1

MKNMNSKQTLVLLIVSCFLTCGSFAQDTLVPAIITFGDSAVDVGNNDYLPTLFKANYPPYGRDFTNKQPTGRFCNGKLATDFTAETLGFTSFAPAYLSPQASGKNLLLGANFASAASGYDEKAATLNHAIPLSQQLEYFKEYQGKLAQVAGSKKAASIIKDSLYVLSAGSSDFVQNYYTNPWINQAITVDQYSSYLLDSFTSFIKGVYGLGARKIGVTSLPPLGCLPAARTLFGYHENGCVARINTDAQGFNKKVSSAASNLQKQLPGLKIVIFDIYKPLFDLVQNPSNFGFAEAGKGCCGTGLVETTSLLCNPKSLGTCSNATQYVFWDSVHPSEAANQVLADNLIIAGIALIT