Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34384.t1 | XP_013469759.1 | 89.6 | 383 | 38 | 1 | 1 | 383 | 1 | 381 | 9.60E-197 | 696 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34384.t1 | A0A072VPR0 | 89.6 | 383 | 38 | 1 | 1 | 383 | 1 | 381 | 6.9e-197 | 696.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene34384 | 0.850402 | 1.74E-60 | -1.69E-46 |
| MS.gene049356 | MS.gene34384 | 0.875796 | 2.32E-68 | -1.69E-46 |
| MS.gene049369 | MS.gene34384 | 0.843377 | 1.45E-58 | -1.69E-46 |
| MS.gene049488 | MS.gene34384 | 0.83401 | 3.84E-56 | -1.69E-46 |
| MS.gene049609 | MS.gene34384 | 0.825558 | 4.39E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene34384 | 0.835693 | 1.45E-56 | -1.69E-46 |
| MS.gene050060 | MS.gene34384 | 0.844082 | 9.42E-59 | -1.69E-46 |
| MS.gene050122 | MS.gene34384 | 0.82072 | 5.91E-53 | -1.69E-46 |
| MS.gene050400 | MS.gene34384 | 0.828014 | 1.14E-54 | -1.69E-46 |
| MS.gene050426 | MS.gene34384 | -0.806135 | 9.53E-50 | -1.69E-46 |
| MS.gene050464 | MS.gene34384 | 0.800171 | 1.63E-48 | -1.69E-46 |
| MS.gene050593 | MS.gene34384 | 0.837308 | 5.61E-57 | -1.69E-46 |
| MS.gene050670 | MS.gene34384 | 0.892609 | 1.36E-74 | -1.69E-46 |
| MS.gene050747 | MS.gene34384 | 0.804112 | 2.53E-49 | -1.69E-46 |
| MS.gene050772 | MS.gene34384 | 0.80741 | 5.13E-50 | -1.69E-46 |
| MS.gene050971 | MS.gene34384 | 0.837083 | 6.41E-57 | -1.69E-46 |
| MS.gene05105 | MS.gene34384 | 0.864816 | 9.26E-65 | -1.69E-46 |
| MS.gene051360 | MS.gene34384 | 0.811864 | 5.66E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene34384 | 0.824466 | 7.95E-54 | -1.69E-46 |
| MS.gene051438 | MS.gene34384 | 0.80944 | 1.89E-50 | -1.69E-46 |
| MS.gene051521 | MS.gene34384 | 0.80265 | 5.07E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene34384 | 0.854088 | 1.55E-61 | -1.69E-46 |
| MS.gene051666 | MS.gene34384 | 0.856438 | 3.22E-62 | -1.69E-46 |
| MS.gene051692 | MS.gene34384 | 0.852608 | 4.13E-61 | -1.69E-46 |
| MS.gene051838 | MS.gene34384 | 0.838326 | 3.07E-57 | -1.69E-46 |
| MS.gene051858 | MS.gene34384 | 0.808666 | 2.77E-50 | -1.69E-46 |
| MS.gene051874 | MS.gene34384 | 0.817519 | 3.16E-52 | -1.69E-46 |
| MS.gene051877 | MS.gene34384 | 0.801354 | 9.37E-49 | -1.69E-46 |
| MS.gene052011 | MS.gene34384 | -0.810472 | 1.13E-50 | -1.69E-46 |
| MS.gene052077 | MS.gene34384 | 0.807711 | 4.42E-50 | -1.69E-46 |
| MS.gene052134 | MS.gene34384 | 0.802149 | 6.43E-49 | -1.69E-46 |
| MS.gene052135 | MS.gene34384 | 0.804648 | 1.95E-49 | -1.69E-46 |
| MS.gene052136 | MS.gene34384 | 0.822822 | 1.93E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene34384 | 0.868262 | 7.44E-66 | -1.69E-46 |
| MS.gene052253 | MS.gene34384 | 0.833445 | 5.31E-56 | -1.69E-46 |
| MS.gene052310 | MS.gene34384 | 0.825129 | 5.55E-54 | -1.69E-46 |
| MS.gene052322 | MS.gene34384 | 0.827635 | 1.40E-54 | -1.69E-46 |
| MS.gene052340 | MS.gene34384 | 0.838059 | 3.60E-57 | -1.69E-46 |
| MS.gene052346 | MS.gene34384 | 0.837551 | 4.86E-57 | -1.69E-46 |
| MS.gene052414 | MS.gene34384 | 0.874976 | 4.43E-68 | -1.69E-46 |
| MS.gene052421 | MS.gene34384 | 0.851271 | 9.89E-61 | -1.69E-46 |
| MS.gene052481 | MS.gene34384 | 0.836284 | 1.02E-56 | -1.69E-46 |
| MS.gene052484 | MS.gene34384 | 0.826366 | 2.82E-54 | -1.69E-46 |
| MS.gene052485 | MS.gene34384 | 0.844371 | 7.88E-59 | -1.69E-46 |
| MS.gene052501 | MS.gene34384 | 0.847516 | 1.10E-59 | -1.69E-46 |
| MS.gene052503 | MS.gene34384 | 0.816464 | 5.46E-52 | -1.69E-46 |
| MS.gene052505 | MS.gene34384 | 0.829491 | 5.00E-55 | -1.69E-46 |
| MS.gene052823 | MS.gene34384 | 0.805023 | 1.63E-49 | -1.69E-46 |
| MS.gene052825 | MS.gene34384 | 0.809508 | 1.83E-50 | -1.69E-46 |
| MS.gene052982 | MS.gene34384 | 0.828264 | 9.90E-55 | -1.69E-46 |
| MS.gene052999 | MS.gene34384 | 0.809836 | 1.55E-50 | -1.69E-46 |
| MS.gene053103 | MS.gene34384 | 0.807649 | 4.56E-50 | -1.69E-46 |
| MS.gene053207 | MS.gene34384 | 0.807559 | 4.76E-50 | -1.69E-46 |
| MS.gene053449 | MS.gene34384 | 0.87704 | 8.64E-69 | -1.69E-46 |
| MS.gene053632 | MS.gene34384 | 0.824004 | 1.02E-53 | -1.69E-46 |
| MS.gene053758 | MS.gene34384 | 0.810663 | 1.03E-50 | -1.69E-46 |
| MS.gene053813 | MS.gene34384 | 0.810792 | 9.67E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene34384 | 0.821711 | 3.49E-53 | -1.69E-46 |
| MS.gene053873 | MS.gene34384 | 0.801535 | 8.60E-49 | -1.69E-46 |
| MS.gene053912 | MS.gene34384 | 0.862181 | 6.08E-64 | -1.69E-46 |
| MS.gene053916 | MS.gene34384 | 0.838415 | 2.92E-57 | -1.69E-46 |
| MS.gene054123 | MS.gene34384 | 0.818447 | 1.95E-52 | -1.69E-46 |
| MS.gene054349 | MS.gene34384 | 0.832268 | 1.04E-55 | -1.69E-46 |
| MS.gene054556 | MS.gene34384 | 0.8003 | 1.54E-48 | -1.69E-46 |
| MS.gene054719 | MS.gene34384 | 0.801759 | 7.74E-49 | -1.69E-46 |
| MS.gene054742 | MS.gene34384 | -0.801636 | 8.20E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene34384 | 0.82537 | 4.86E-54 | -1.69E-46 |
| MS.gene05494 | MS.gene34384 | 0.816364 | 5.74E-52 | -1.69E-46 |
| MS.gene054955 | MS.gene34384 | 0.839981 | 1.14E-57 | -1.69E-46 |
| MS.gene05505 | MS.gene34384 | 0.84327 | 1.55E-58 | -1.69E-46 |
| MS.gene055116 | MS.gene34384 | 0.846677 | 1.87E-59 | -1.69E-46 |
| MS.gene055206 | MS.gene34384 | 0.829323 | 5.49E-55 | -1.69E-46 |
| MS.gene055539 | MS.gene34384 | 0.850904 | 1.26E-60 | -1.69E-46 |
| MS.gene05553 | MS.gene34384 | 0.822341 | 2.50E-53 | -1.69E-46 |
| MS.gene05556 | MS.gene34384 | 0.829461 | 5.08E-55 | -1.69E-46 |
| MS.gene055722 | MS.gene34384 | 0.81683 | 4.52E-52 | -1.69E-46 |
| MS.gene055741 | MS.gene34384 | 0.847243 | 1.31E-59 | -1.69E-46 |
| MS.gene055744 | MS.gene34384 | 0.850589 | 1.54E-60 | -1.69E-46 |
| MS.gene055909 | MS.gene34384 | 0.851167 | 1.06E-60 | -1.69E-46 |
| MS.gene055911 | MS.gene34384 | 0.85424 | 1.40E-61 | -1.69E-46 |
| MS.gene055941 | MS.gene34384 | 0.836305 | 1.01E-56 | -1.69E-46 |
| MS.gene05602 | MS.gene34384 | 0.800653 | 1.30E-48 | -1.69E-46 |
| MS.gene056191 | MS.gene34384 | 0.804876 | 1.75E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene34384 | 0.83886 | 2.24E-57 | -1.69E-46 |
| MS.gene056410 | MS.gene34384 | 0.803403 | 3.54E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene34384 | 0.873414 | 1.50E-67 | -1.69E-46 |
| MS.gene056514 | MS.gene34384 | 0.809409 | 1.92E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene34384 | 0.807417 | 5.11E-50 | -1.69E-46 |
| MS.gene05664 | MS.gene34384 | 0.856309 | 3.51E-62 | -1.69E-46 |
| MS.gene05666 | MS.gene34384 | 0.832882 | 7.33E-56 | -1.69E-46 |
| MS.gene056877 | MS.gene34384 | 0.809319 | 2.01E-50 | -1.69E-46 |
| MS.gene057019 | MS.gene34384 | 0.801609 | 8.30E-49 | -1.69E-46 |
| MS.gene057048 | MS.gene34384 | 0.807356 | 5.26E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene34384 | 0.81964 | 1.04E-52 | -1.69E-46 |
| MS.gene057086 | MS.gene34384 | 0.819621 | 1.05E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene34384 | 0.841808 | 3.80E-58 | -1.69E-46 |
| MS.gene057146 | MS.gene34384 | 0.814554 | 1.45E-51 | -1.69E-46 |
| MS.gene057289 | MS.gene34384 | 0.859082 | 5.29E-63 | -1.69E-46 |
| MS.gene057330 | MS.gene34384 | 0.800439 | 1.44E-48 | -1.69E-46 |
| MS.gene057396 | MS.gene34384 | 0.808905 | 2.46E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene34384 | 0.816938 | 4.27E-52 | -1.69E-46 |
| MS.gene057448 | MS.gene34384 | 0.801503 | 8.73E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene34384 | 0.885836 | 5.77E-72 | -1.69E-46 |
| MS.gene057749 | MS.gene34384 | 0.883858 | 3.14E-71 | -1.69E-46 |
| MS.gene057823 | MS.gene34384 | 0.892944 | 9.94E-75 | -1.69E-46 |
| MS.gene057825 | MS.gene34384 | 0.806762 | 7.03E-50 | -1.69E-46 |
| MS.gene057856 | MS.gene34384 | 0.870459 | 1.44E-66 | -1.69E-46 |
| MS.gene057857 | MS.gene34384 | 0.810294 | 1.24E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene34384 | 0.816814 | 4.55E-52 | -1.69E-46 |
| MS.gene058006 | MS.gene34384 | 0.811928 | 5.48E-51 | -1.69E-46 |
| MS.gene058007 | MS.gene34384 | 0.838684 | 2.48E-57 | -1.69E-46 |
| MS.gene058019 | MS.gene34384 | 0.837538 | 4.90E-57 | -1.69E-46 |
| MS.gene058120 | MS.gene34384 | 0.838302 | 3.12E-57 | -1.69E-46 |
| MS.gene058376 | MS.gene34384 | 0.848052 | 7.84E-60 | -1.69E-46 |
| MS.gene058444 | MS.gene34384 | 0.870066 | 1.93E-66 | -1.69E-46 |
| MS.gene058660 | MS.gene34384 | 0.802545 | 5.33E-49 | -1.69E-46 |
| MS.gene058700 | MS.gene34384 | 0.853643 | 2.09E-61 | -1.69E-46 |
| MS.gene058838 | MS.gene34384 | 0.825231 | 5.25E-54 | -1.69E-46 |
| MS.gene05886 | MS.gene34384 | 0.811851 | 5.69E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene34384 | 0.847202 | 1.34E-59 | -1.69E-46 |
| MS.gene058948 | MS.gene34384 | 0.840307 | 9.41E-58 | -1.69E-46 |
| MS.gene058993 | MS.gene34384 | 0.812612 | 3.88E-51 | -1.69E-46 |
| MS.gene059011 | MS.gene34384 | 0.806396 | 8.39E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene34384 | 0.826827 | 2.19E-54 | -1.69E-46 |
| MS.gene059285 | MS.gene34384 | 0.818074 | 2.37E-52 | -1.69E-46 |
| MS.gene05934 | MS.gene34384 | 0.832637 | 8.44E-56 | -1.69E-46 |
| MS.gene059366 | MS.gene34384 | 0.833663 | 4.68E-56 | -1.69E-46 |
| MS.gene059368 | MS.gene34384 | 0.824583 | 7.46E-54 | -1.69E-46 |
| MS.gene059420 | MS.gene34384 | 0.856497 | 3.09E-62 | -1.69E-46 |
| MS.gene059455 | MS.gene34384 | 0.882055 | 1.44E-70 | -1.69E-46 |
| MS.gene059597 | MS.gene34384 | 0.816562 | 5.19E-52 | -1.69E-46 |
| MS.gene059674 | MS.gene34384 | 0.854922 | 8.91E-62 | -1.69E-46 |
| MS.gene059676 | MS.gene34384 | 0.838295 | 3.13E-57 | -1.69E-46 |
| MS.gene059688 | MS.gene34384 | 0.844717 | 6.36E-59 | -1.69E-46 |
| MS.gene059692 | MS.gene34384 | 0.830153 | 3.45E-55 | -1.69E-46 |
| MS.gene059695 | MS.gene34384 | 0.834377 | 3.11E-56 | -1.69E-46 |
| MS.gene059711 | MS.gene34384 | 0.811924 | 5.49E-51 | -1.69E-46 |
| MS.gene059807 | MS.gene34384 | 0.831072 | 2.05E-55 | -1.69E-46 |
| MS.gene060193 | MS.gene34384 | 0.803618 | 3.20E-49 | -1.69E-46 |
| MS.gene060247 | MS.gene34384 | 0.803571 | 3.27E-49 | -1.69E-46 |
| MS.gene060372 | MS.gene34384 | 0.825221 | 5.27E-54 | -1.69E-46 |
| MS.gene060403 | MS.gene34384 | 0.883081 | 6.07E-71 | -1.69E-46 |
| MS.gene060485 | MS.gene34384 | 0.804327 | 2.28E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene34384 | 0.820524 | 6.56E-53 | -1.69E-46 |
| MS.gene060818 | MS.gene34384 | 0.806254 | 8.99E-50 | -1.69E-46 |
| MS.gene060835 | MS.gene34384 | 0.855431 | 6.34E-62 | -1.69E-46 |
| MS.gene060837 | MS.gene34384 | 0.867835 | 1.02E-65 | -1.69E-46 |
| MS.gene06097 | MS.gene34384 | 0.821848 | 3.25E-53 | -1.69E-46 |
| MS.gene061041 | MS.gene34384 | 0.825941 | 3.56E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene34384 | 0.804754 | 1.86E-49 | -1.69E-46 |
| MS.gene061051 | MS.gene34384 | -0.808506 | 2.99E-50 | -1.69E-46 |
| MS.gene061154 | MS.gene34384 | 0.847445 | 1.15E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34384.t1 | MTR_1g102880 | 89.556 | 383 | 38 | 1 | 1 | 383 | 1 | 381 | 0.0 | 711 |
| MS.gene34384.t1 | MTR_1g102880 | 89.937 | 318 | 32 | 0 | 1 | 318 | 1 | 318 | 0.0 | 600 |
| MS.gene34384.t1 | MTR_1g102880 | 88.814 | 295 | 31 | 1 | 89 | 383 | 1 | 293 | 0.0 | 543 |
| MS.gene34384.t1 | MTR_1g102880 | 89.130 | 230 | 25 | 0 | 89 | 318 | 1 | 230 | 7.13e-153 | 431 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34384.t1 | AT4G38225 | 56.272 | 279 | 120 | 1 | 105 | 383 | 74 | 350 | 1.82e-112 | 333 |
| MS.gene34384.t1 | AT4G38225 | 56.272 | 279 | 120 | 1 | 105 | 383 | 74 | 350 | 2.17e-112 | 333 |
| MS.gene34384.t1 | AT4G38225 | 60.766 | 209 | 82 | 0 | 105 | 313 | 74 | 282 | 1.26e-90 | 275 |
Find 94 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATTGCTTCAGATATTTC+TGG | 0.172915 | 1.2:-76572088 | MS.gene34384:CDS |
| ATTTGGGGCTTTCCTATTGC+TGG | 0.231065 | 1.2:-76573842 | MS.gene34384:CDS |
| CTTCAGATATTTCTGGTATC+TGG | 0.246622 | 1.2:-76572081 | MS.gene34384:CDS |
| CAGAGTTCACTGCAGCAAAA+AGG | 0.289325 | 1.2:-76573868 | MS.gene34384:CDS |
| TGCTTCCTTTGCATCTTGAT+TGG | 0.292870 | 1.2:+76573258 | None:intergenic |
| CTCCTCCAATTGAAAGAAAA+TGG | 0.315285 | 1.2:+76573811 | None:intergenic |
| CCATTCACCTGATATTCTTC+TGG | 0.324871 | 1.2:+76572633 | None:intergenic |
| TCCCATTCTCGGTATGCTTC+AGG | 0.340067 | 1.2:+76572547 | None:intergenic |
| AAGGAAGCAGTGAAAGAAAT+AGG | 0.350072 | 1.2:-76573244 | MS.gene34384:CDS |
| TATTACTTCCTAAGCAACTA+TGG | 0.363567 | 1.2:-76571857 | MS.gene34384:CDS |
| TCAGGTGAATGGGATGGATT+TGG | 0.376714 | 1.2:-76572622 | MS.gene34384:CDS |
| AGAAATATCTGAAGCAATCA+AGG | 0.405236 | 1.2:+76572090 | None:intergenic |
| ATACTTTGACCTCCCATTCT+CGG | 0.410913 | 1.2:+76572536 | None:intergenic |
| ATGGTCTGAAACCCAGCAAT+AGG | 0.420482 | 1.2:+76573830 | None:intergenic |
| CATAATATGTAACTTGCCTT+CGG | 0.424991 | 1.2:+76571726 | None:intergenic |
| GGGAGGTCAAAGTATTTGAT+TGG | 0.431446 | 1.2:-76572528 | MS.gene34384:CDS |
| CTTACACTTCCGGTGTCTGT+AGG | 0.436617 | 1.2:+76572028 | None:intergenic |
| GAAGAATGACATAATAGAGT+TGG | 0.438887 | 1.2:-76572305 | MS.gene34384:CDS |
| TTTGGGGCTTTCCTATTGCT+GGG | 0.450134 | 1.2:-76573841 | MS.gene34384:CDS |
| TACTCAAGAACATGATCCTC+TGG | 0.452071 | 1.2:+76572478 | None:intergenic |
| CCAGAAGAATATCAGGTGAA+TGG | 0.455183 | 1.2:-76572633 | MS.gene34384:CDS |
| TGCCTGAAGCATACCGAGAA+TGG | 0.461809 | 1.2:-76572549 | MS.gene34384:CDS |
| CAATTTGCCAGAAGAATATC+AGG | 0.465090 | 1.2:-76572640 | MS.gene34384:CDS |
| AGATATTTCTGGTATCTGGC+AGG | 0.473135 | 1.2:-76572077 | MS.gene34384:CDS |
| CAGAAGAATATCAGGTGAAT+GGG | 0.475043 | 1.2:-76572632 | MS.gene34384:CDS |
| AATGCATGGAGAAGGGGAAG+TGG | 0.477259 | 1.2:+76574097 | None:intergenic |
| TTTCTTTCAATTGGAGGAGG+AGG | 0.483111 | 1.2:-76573807 | MS.gene34384:intron |
| GGAGCAGACTTCAGTAATCA+AGG | 0.484945 | 1.2:-76572601 | MS.gene34384:CDS |
| ATGTGAAGAGGATGGAAGAG+TGG | 0.489017 | 1.2:+76574055 | None:intergenic |
| AACGAACACCATAGTTGCTT+AGG | 0.494963 | 1.2:+76571849 | None:intergenic |
| GCCTGAAGCATACCGAGAAT+GGG | 0.495903 | 1.2:-76572548 | MS.gene34384:CDS |
| TGGTATGGACCGTTCAGAAA+TGG | 0.498581 | 1.2:-76572166 | MS.gene34384:CDS |
| TTCAGAAATGGTGATCAACT+TGG | 0.499904 | 1.2:-76572154 | MS.gene34384:CDS |
| AAAGAAATAGGCGAAATTGA+TGG | 0.502155 | 1.2:-76573232 | MS.gene34384:CDS |
| GATGGTCTGATAGGTGTAAT+GGG | 0.503950 | 1.2:-76573214 | MS.gene34384:CDS |
| TGATGGTCTGATAGGTGTAA+TGG | 0.504065 | 1.2:-76573215 | MS.gene34384:CDS |
| GTTCAGTTACTTCCCACTGT+TGG | 0.504325 | 1.2:-76572448 | MS.gene34384:CDS |
| GGTGAAACTCTAACTGAAGT+AGG | 0.504533 | 1.2:-76571810 | MS.gene34384:CDS |
| AAGAGAGGTCCTTACACTTC+CGG | 0.505168 | 1.2:+76572018 | None:intergenic |
| GCTTCAGGCACCACCGACTC+TGG | 0.507414 | 1.2:+76572562 | None:intergenic |
| ACCCGAGATTCAAAATCTTG+TGG | 0.514140 | 1.2:+76572265 | None:intergenic |
| AGGATCATGTTCTTGAGTAC+AGG | 0.519343 | 1.2:-76572474 | MS.gene34384:CDS |
| TCCTCTGGATCAGCAAGAGT+GGG | 0.521470 | 1.2:+76572493 | None:intergenic |
| GTATTTCGTGAGCAGTGGTA+TGG | 0.521766 | 1.2:-76572181 | MS.gene34384:CDS |
| GTGGCTCTTATGTTGCTGTA+TGG | 0.522927 | 1.2:-76572333 | MS.gene34384:CDS |
| TGCTGCTACGGTATACAGTT+CGG | 0.525686 | 1.2:-76572413 | MS.gene34384:CDS |
| AACTCTAACTGAAGTAGGAT+GGG | 0.527247 | 1.2:-76571805 | MS.gene34384:CDS |
| GGCGAAATTGATGGTCTGAT+AGG | 0.528076 | 1.2:-76573223 | MS.gene34384:CDS |
| TGTGGTAGATGTGAAGAGGA+TGG | 0.531243 | 1.2:+76574047 | None:intergenic |
| AAACTCTAACTGAAGTAGGA+TGG | 0.537080 | 1.2:-76571806 | MS.gene34384:CDS |
| TTACACTTCCGGTGTCTGTA+GGG | 0.540859 | 1.2:+76572029 | None:intergenic |
| CAGACTTCAGTAATCAAGGT+AGG | 0.543736 | 1.2:-76572597 | MS.gene34384:CDS |
| GGTTGAAGAATGCATGGAGA+AGG | 0.544763 | 1.2:+76574089 | None:intergenic |
| ATCCTCTGGATCAGCAAGAG+TGG | 0.546743 | 1.2:+76572492 | None:intergenic |
| TACAGCAACATAAGAGCCAC+TGG | 0.547352 | 1.2:+76572336 | None:intergenic |
| GTTGAAGAATGCATGGAGAA+GGG | 0.549071 | 1.2:+76574090 | None:intergenic |
| ATGCAGAAGTCTGTTAGAGA+TGG | 0.554984 | 1.2:-76571891 | MS.gene34384:CDS |
| GATATTTCTGGTATCTGGCA+GGG | 0.561033 | 1.2:-76572076 | MS.gene34384:CDS |
| CAACATAAGAGCCACTGGAT+TGG | 0.561674 | 1.2:+76572341 | None:intergenic |
| ATGACAAAAGTATTGAAGCT+TGG | 0.562334 | 1.2:-76572666 | MS.gene34384:CDS |
| ACTTCCCACTGTTGGATGTG+AGG | 0.571880 | 1.2:-76572440 | MS.gene34384:CDS |
| TTGAAGAATGCATGGAGAAG+GGG | 0.576305 | 1.2:+76574091 | None:intergenic |
| TGCAGCCAATCAAGATGCAA+AGG | 0.577786 | 1.2:-76573263 | MS.gene34384:CDS |
| ACTGTATACCGTAGCAGCAT+CGG | 0.577793 | 1.2:+76572417 | None:intergenic |
| CCCCACTCTTGCTGATCCAG+AGG | 0.577837 | 1.2:-76572494 | MS.gene34384:CDS |
| GCCACTGGATTGGTAAGCAA+AGG | 0.579088 | 1.2:+76572351 | None:intergenic |
| GAACGTGGTTGAAGAATGCA+TGG | 0.579178 | 1.2:+76574083 | None:intergenic |
| ATGTGAGGCCGATGCTGCTA+CGG | 0.581645 | 1.2:-76572425 | MS.gene34384:CDS |
| CTCAAGCACTGCAAAGCCGA+AGG | 0.585448 | 1.2:-76571742 | MS.gene34384:CDS |
| GCCTTTGCTTACCAATCCAG+TGG | 0.586051 | 1.2:-76572352 | MS.gene34384:CDS |
| TGTATTAAATAATACAGAGA+TGG | 0.591790 | 1.2:-76572221 | MS.gene34384:CDS |
| AGAAATGGTGATCAACTTGG+AGG | 0.595278 | 1.2:-76572151 | MS.gene34384:CDS |
| AGAATATCAGGTGAATGGGA+TGG | 0.597864 | 1.2:-76572628 | MS.gene34384:CDS |
| TTAGAGTATTTCGTGAGCAG+TGG | 0.607973 | 1.2:-76572186 | MS.gene34384:CDS |
| AGACTTCAGTAATCAAGGTA+GGG | 0.612205 | 1.2:-76572596 | MS.gene34384:CDS |
| TCGTTTGAACGAAACAAGGA+TGG | 0.615348 | 1.2:-76571831 | MS.gene34384:CDS |
| TACATGTGGTAGATGTGAAG+AGG | 0.617495 | 1.2:+76574043 | None:intergenic |
| AATTGAACTGCCAGAGTCGG+TGG | 0.618819 | 1.2:-76572572 | MS.gene34384:CDS |
| ACTGGATTGGTAAGCAAAGG+CGG | 0.626433 | 1.2:+76572354 | None:intergenic |
| TAGAAGCGAAAGCAGAATCA+CGG | 0.626937 | 1.2:+76572119 | None:intergenic |
| GGAAGAGTGGAGAAAGAACG+TGG | 0.632927 | 1.2:+76574068 | None:intergenic |
| GACGTTTGCAGAGAAGAATG+AGG | 0.633011 | 1.2:+76574121 | None:intergenic |
| TCGGCCTCACATCCAACAGT+GGG | 0.636312 | 1.2:+76572436 | None:intergenic |
| GAAATATCTGAAGCAATCAA+GGG | 0.636929 | 1.2:+76572091 | None:intergenic |
| GTGTTCGTTTGAACGAAACA+AGG | 0.644440 | 1.2:-76571835 | MS.gene34384:CDS |
| GGTAATTGAACTGCCAGAGT+CGG | 0.647523 | 1.2:-76572575 | MS.gene34384:CDS |
| ATCGGCCTCACATCCAACAG+TGG | 0.651816 | 1.2:+76572435 | None:intergenic |
| AGTTGATCACCATTTCTGAA+CGG | 0.657715 | 1.2:+76572157 | None:intergenic |
| AACAGTGGGAAGTAACTGAA+CGG | 0.658899 | 1.2:+76572450 | None:intergenic |
| AAAGTGTGCGGCGAAAGCAG+TGG | 0.662083 | 1.2:-76572382 | MS.gene34384:CDS |
| TGAAGCATACCGAGAATGGG+AGG | 0.666775 | 1.2:-76572545 | MS.gene34384:CDS |
| AATACAGAGATGGAGCTGCA+AGG | 0.669200 | 1.2:-76572211 | MS.gene34384:CDS |
| CCTCTGGATCAGCAAGAGTG+GGG | 0.673591 | 1.2:+76572494 | None:intergenic |
| TCGGATGAGAGAAAAGTGTG+CGG | 0.745532 | 1.2:-76572394 | MS.gene34384:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTAATTTCCATTTTA+TGG | - | chr1.2:76572382-76572401 | MS.gene34384:CDS | 10.0% |
| !! | AATACATATATGAAAAACAA+AGG | + | chr1.2:76573863-76573882 | None:intergenic | 15.0% |
| !! | AATATCTATATACATGAAAT+TGG | - | chr1.2:76572777-76572796 | MS.gene34384:intron | 15.0% |
| !! | ATACATATATGAAAAACAAA+GGG | + | chr1.2:76573862-76573881 | None:intergenic | 15.0% |
| !! | TAATAATATTCCATGTATTT+AGG | - | chr1.2:76572066-76572085 | MS.gene34384:CDS | 15.0% |
| !!! | ATTTTTATCAAACTTAATTG+TGG | - | chr1.2:76572979-76572998 | MS.gene34384:intron | 15.0% |
| !!! | TATGTATTTTTCTGTATTAT+TGG | - | chr1.2:76573875-76573894 | MS.gene34384:intron | 15.0% |
| !! | AAAGAATAGAAGAAAAAGAA+AGG | + | chr1.2:76571846-76571865 | None:intergenic | 20.0% |
| !! | AAATAAGGTTAAAACAGTTT+CGG | - | chr1.2:76572227-76572246 | MS.gene34384:CDS | 20.0% |
| !! | AAGAATAGAAGAAAAAGAAA+GGG | + | chr1.2:76571845-76571864 | None:intergenic | 20.0% |
| !! | TAGAAAATTAACAGCATATT+TGG | + | chr1.2:76572330-76572349 | None:intergenic | 20.0% |
| !! | TGGAAAATGACAAATTAATT+GGG | + | chr1.2:76572451-76572470 | None:intergenic | 20.0% |
| !! | TGTATTAAATAATACAGAGA+TGG | - | chr1.2:76573629-76573648 | MS.gene34384:intron | 20.0% |
| !! | TTATAAGTGCTTAACTAAAT+TGG | + | chr1.2:76572106-76572125 | None:intergenic | 20.0% |
| !!! | GTATTATTGGTTTCATTATA+TGG | - | chr1.2:76573888-76573907 | MS.gene34384:intron | 20.0% |
| ! | AAAATTCCATTCCATAAAGA+AGG | + | chr1.2:76571893-76571912 | None:intergenic | 25.0% |
| ! | AAATAGTAAACTAAACACCA+AGG | + | chr1.2:76572959-76572978 | None:intergenic | 25.0% |
| ! | AAATTCCATTCCATAAAGAA+GGG | + | chr1.2:76571892-76571911 | None:intergenic | 25.0% |
| ! | AACTATATGCAACGTTAAAT+TGG | - | chr1.2:76572808-76572827 | MS.gene34384:intron | 25.0% |
| ! | AATAAGGTTAAAACAGTTTC+GGG | - | chr1.2:76572228-76572247 | MS.gene34384:CDS | 25.0% |
| ! | ACTAAATTGGTTATCCAAAT+AGG | + | chr1.2:76572093-76572112 | None:intergenic | 25.0% |
| ! | ATAATATGGAATAGCCAAAT+AGG | + | chr1.2:76573136-76573155 | None:intergenic | 25.0% |
| ! | ATAATTGATACCCTTCTTTA+TGG | - | chr1.2:76571879-76571898 | MS.gene34384:CDS | 25.0% |
| ! | ATGAATTCCAAACAATACTA+GGG | + | chr1.2:76573091-76573110 | None:intergenic | 25.0% |
| ! | ATGGAGAGTTTATGAAAATA+AGG | - | chr1.2:76572212-76572231 | MS.gene34384:CDS | 25.0% |
| ! | CTAAATTGGTTATCCAAATA+GGG | + | chr1.2:76572092-76572111 | None:intergenic | 25.0% |
| ! | GTGGAAAATGACAAATTAAT+TGG | + | chr1.2:76572452-76572471 | None:intergenic | 25.0% |
| ! | TGAAGCTATGAATAGTAAAT+TGG | - | chr1.2:76572528-76572547 | MS.gene34384:CDS | 25.0% |
| !! | TTTAACGTTGCATATAGTTT+TGG | + | chr1.2:76572807-76572826 | None:intergenic | 25.0% |
| !!! | ATTGTTTTCATTGTTATTCG+TGG | - | chr1.2:76572353-76572372 | MS.gene34384:CDS | 25.0% |
| !!! | GTATGCAATGTTTGATTTTA+AGG | - | chr1.2:76572884-76572903 | MS.gene34384:intron | 25.0% |
| !!! | TGTTTTTATTCAAGCTTTCA+TGG | - | chr1.2:76572193-76572212 | MS.gene34384:CDS | 25.0% |
| AAAGAAATAGGCGAAATTGA+TGG | - | chr1.2:76572618-76572637 | MS.gene34384:CDS | 30.0% | |
| AGAAAAAGAAAGGGTTTGAA+AGG | + | chr1.2:76571836-76571855 | None:intergenic | 30.0% | |
| AGGTAGTTAGAATACCTATT+TGG | - | chr1.2:76573119-76573138 | MS.gene34384:intron | 30.0% | |
| ATTGCGAAAGTTTATGGAAA+CGG | + | chr1.2:76572266-76572285 | None:intergenic | 30.0% | |
| CATCAAGTAAGTAAGAACAA+GGG | - | chr1.2:76572672-76572691 | MS.gene34384:CDS | 30.0% | |
| CATGAATTCCAAACAATACT+AGG | + | chr1.2:76573092-76573111 | None:intergenic | 30.0% | |
| CTACATTGTATGAGTGAAAA+TGG | + | chr1.2:76572479-76572498 | None:intergenic | 30.0% | |
| GAAGAATGACATAATAGAGT+TGG | - | chr1.2:76573545-76573564 | MS.gene34384:intron | 30.0% | |
| GAGTGTTTGAATCTAAAAAC+AGG | - | chr1.2:76572550-76572569 | MS.gene34384:CDS | 30.0% | |
| TAGATTATATCCGTTAACCA+AGG | + | chr1.2:76573046-76573065 | None:intergenic | 30.0% | |
| TATTACTTCCTAAGCAACTA+TGG | - | chr1.2:76573993-76574012 | MS.gene34384:intron | 30.0% | |
| TCATCAAGTAAGTAAGAACA+AGG | - | chr1.2:76572671-76572690 | MS.gene34384:CDS | 30.0% | |
| TTGATTGCTTCAGATATTTC+TGG | - | chr1.2:76573762-76573781 | MS.gene34384:intron | 30.0% | |
| TTGGCTATTCCATATTATGA+TGG | - | chr1.2:76573138-76573157 | MS.gene34384:intron | 30.0% | |
| ! | AGAAATATCTGAAGCAATCA+AGG | + | chr1.2:76573763-76573782 | None:intergenic | 30.0% |
| ! | ATCCACAAGATTTTGAATCT+CGG | - | chr1.2:76573583-76573602 | MS.gene34384:intron | 30.0% |
| ! | CATAATATGTAACTTGCCTT+CGG | + | chr1.2:76574127-76574146 | None:intergenic | 30.0% |
| ! | CCATTTTATGGTTGTATTGA+GGG | - | chr1.2:76572394-76572413 | MS.gene34384:CDS | 30.0% |
| ! | GAAATATCTGAAGCAATCAA+GGG | + | chr1.2:76573762-76573781 | None:intergenic | 30.0% |
| ! | GTTCTAAGTCCATCATAATA+TGG | + | chr1.2:76573150-76573169 | None:intergenic | 30.0% |
| ! | TATTTGGATTGACTTATCTG+AGG | + | chr1.2:76572314-76572333 | None:intergenic | 30.0% |
| ! | TCAGACCATTTTCTTTCAAT+TGG | - | chr1.2:76572034-76572053 | MS.gene34384:CDS | 30.0% |
| ! | TCCATTTTATGGTTGTATTG+AGG | - | chr1.2:76572393-76572412 | MS.gene34384:CDS | 30.0% |
| ! | TTTGGAATTCATGCAATACT+AGG | - | chr1.2:76573099-76573118 | MS.gene34384:intron | 30.0% |
| !! | AAGGTAGCCTATATTTTTGA+AGG | - | chr1.2:76572932-76572951 | MS.gene34384:intron | 30.0% |
| !! | ATGACAAAAGTATTGAAGCT+TGG | - | chr1.2:76573184-76573203 | MS.gene34384:intron | 30.0% |
| !! | ATTTTAAGGACCAAGTTAAG+TGG | - | chr1.2:76572898-76572917 | MS.gene34384:intron | 30.0% |
| !!! | ATTTTTTCCACCTTGGTTAA+CGG | - | chr1.2:76573033-76573052 | MS.gene34384:intron | 30.0% |
| AAAACAAAGGGTAACAAGAG+AGG | + | chr1.2:76573850-76573869 | None:intergenic | 35.0% | |
| AAACTCTAACTGAAGTAGGA+TGG | - | chr1.2:76574044-76574063 | MS.gene34384:intron | 35.0% | |
| AACCAAACATCAAGCTGAAA+AGG | + | chr1.2:76571924-76571943 | None:intergenic | 35.0% | |
| AACTCTAACTGAAGTAGGAT+GGG | - | chr1.2:76574045-76574064 | MS.gene34384:intron | 35.0% | |
| AAGGAAGCAGTGAAAGAAAT+AGG | - | chr1.2:76572606-76572625 | MS.gene34384:CDS | 35.0% | |
| ACCAAACATCAAGCTGAAAA+GGG | + | chr1.2:76571923-76571942 | None:intergenic | 35.0% | |
| AGACTTCAGTAATCAAGGTA+GGG | - | chr1.2:76573254-76573273 | MS.gene34384:CDS | 35.0% | |
| AGTTGATCACCATTTCTGAA+CGG | + | chr1.2:76573696-76573715 | None:intergenic | 35.0% | |
| ATGGCTTTCTATTTAACTCC+AGG | - | chr1.2:76573907-76573926 | MS.gene34384:intron | 35.0% | |
| ATTATATCCGTTAACCAAGG+TGG | + | chr1.2:76573043-76573062 | None:intergenic | 35.0% | |
| CAATTTGCCAGAAGAATATC+AGG | - | chr1.2:76573210-76573229 | MS.gene34384:CDS | 35.0% | |
| CAGAAGAATATCAGGTGAAT+GGG | - | chr1.2:76573218-76573237 | MS.gene34384:CDS | 35.0% | |
| CCAAGGTCCTTCAAAAATAT+AGG | + | chr1.2:76572942-76572961 | None:intergenic | 35.0% | |
| CCCTCAATACAACCATAAAA+TGG | + | chr1.2:76572397-76572416 | None:intergenic | 35.0% | |
| CTCCTCCAATTGAAAGAAAA+TGG | + | chr1.2:76572042-76572061 | None:intergenic | 35.0% | |
| CTTGTGATTGCGAAAGTTTA+TGG | + | chr1.2:76572272-76572291 | None:intergenic | 35.0% | |
| TCCAAACAATACTAGGGAAA+GGG | + | chr1.2:76573085-76573104 | None:intergenic | 35.0% | |
| TCCTTAAAGGATGAAACTAG+TGG | - | chr1.2:76572862-76572881 | MS.gene34384:intron | 35.0% | |
| TGATACCCTTCTTTATGGAA+TGG | - | chr1.2:76571884-76571903 | MS.gene34384:CDS | 35.0% | |
| TGCAGCAAAAAGGGAAATTT+GGG | - | chr1.2:76571992-76572011 | MS.gene34384:intron | 35.0% | |
| TTCAAAAACAGATGACCTCA+AGG | + | chr1.2:76572748-76572767 | None:intergenic | 35.0% | |
| TTCAGAAATGGTGATCAACT+TGG | - | chr1.2:76573696-76573715 | MS.gene34384:intron | 35.0% | |
| TTCCAAACAATACTAGGGAA+AGG | + | chr1.2:76573086-76573105 | None:intergenic | 35.0% | |
| TTGTATGAGTGAAAATGGTG+AGG | + | chr1.2:76572474-76572493 | None:intergenic | 35.0% | |
| ! | AAGATTTTGAATCTCGGGTT+AGG | - | chr1.2:76573589-76573608 | MS.gene34384:intron | 35.0% |
| ! | ACCACTAGTTTCATCCTTTA+AGG | + | chr1.2:76572866-76572885 | None:intergenic | 35.0% |
| ! | CATCCTTTAAGGACCAATTT+GGG | + | chr1.2:76572855-76572874 | None:intergenic | 35.0% |
| ! | CATTTTCTTTCAATTGGAGG+AGG | - | chr1.2:76572040-76572059 | MS.gene34384:CDS | 35.0% |
| ! | GACCATTTTCTTTCAATTGG+AGG | - | chr1.2:76572037-76572056 | MS.gene34384:CDS | 35.0% |
| ! | TCATCCTTTAAGGACCAATT+TGG | + | chr1.2:76572856-76572875 | None:intergenic | 35.0% |
| ! | TCCACAAGATTTTGAATCTC+GGG | - | chr1.2:76573584-76573603 | MS.gene34384:intron | 35.0% |
| ! | TGTCACATTTTTGCCCAAAT+TGG | - | chr1.2:76572839-76572858 | MS.gene34384:intron | 35.0% |
| !! | CCTATATTTTTGAAGGACCT+TGG | - | chr1.2:76572939-76572958 | MS.gene34384:intron | 35.0% |
| !! | CTTCAGATATTTCTGGTATC+TGG | - | chr1.2:76573769-76573788 | MS.gene34384:intron | 35.0% |
| !!! | TAGGATGGGTTTTAGATCAA+GGG | - | chr1.2:76574059-76574078 | MS.gene34384:CDS | 35.0% |
| AACAGTGGGAAGTAACTGAA+CGG | + | chr1.2:76573403-76573422 | None:intergenic | 40.0% | |
| AACGAACACCATAGTTGCTT+AGG | + | chr1.2:76574004-76574023 | None:intergenic | 40.0% | |
| ACCCGAGATTCAAAATCTTG+TGG | + | chr1.2:76573588-76573607 | None:intergenic | 40.0% | |
| ACCCTTTCCCTAGTATTGTT+TGG | - | chr1.2:76573081-76573100 | MS.gene34384:intron | 40.0% | |
| AGAAATGGTGATCAACTTGG+AGG | - | chr1.2:76573699-76573718 | MS.gene34384:intron | 40.0% | |
| AGAATATCAGGTGAATGGGA+TGG | - | chr1.2:76573222-76573241 | MS.gene34384:CDS | 40.0% | |
| AGAGTTCACTGCAGCAAAAA+GGG | - | chr1.2:76571983-76572002 | MS.gene34384:intron | 40.0% | |
| AGGATCATGTTCTTGAGTAC+AGG | - | chr1.2:76573376-76573395 | MS.gene34384:intron | 40.0% | |
| ATACTTTGACCTCCCATTCT+CGG | + | chr1.2:76573317-76573336 | None:intergenic | 40.0% | |
| ATCACAAGTGCTCATGTTAG+TGG | - | chr1.2:76572284-76572303 | MS.gene34384:CDS | 40.0% | |
| ATGCAGAAGTCTGTTAGAGA+TGG | - | chr1.2:76573959-76573978 | MS.gene34384:intron | 40.0% | |
| CAAGGCAAGACAAGATGAAA+TGG | + | chr1.2:76572730-76572749 | None:intergenic | 40.0% | |
| CAGACTTCAGTAATCAAGGT+AGG | - | chr1.2:76573253-76573272 | MS.gene34384:CDS | 40.0% | |
| CCAAATAGGGCCTAAATACA+TGG | + | chr1.2:76572079-76572098 | None:intergenic | 40.0% | |
| CCAGAAGAATATCAGGTGAA+TGG | - | chr1.2:76573217-76573236 | MS.gene34384:CDS | 40.0% | |
| CCATGTATTTAGGCCCTATT+TGG | - | chr1.2:76572076-76572095 | MS.gene34384:CDS | 40.0% | |
| CCATTCACCTGATATTCTTC+TGG | + | chr1.2:76573220-76573239 | None:intergenic | 40.0% | |
| CTGCAGCAAAAAGGGAAATT+TGG | - | chr1.2:76571991-76572010 | MS.gene34384:intron | 40.0% | |
| GACAAGATGAAATGGTAGGA+AGG | + | chr1.2:76572722-76572741 | None:intergenic | 40.0% | |
| GATGGTCTGATAGGTGTAAT+GGG | - | chr1.2:76572636-76572655 | MS.gene34384:CDS | 40.0% | |
| GCAAGACAAGATGAAATGGT+AGG | + | chr1.2:76572726-76572745 | None:intergenic | 40.0% | |
| GCAGCAAAAAGGGAAATTTG+GGG | - | chr1.2:76571993-76572012 | MS.gene34384:intron | 40.0% | |
| GGGCAAAAATGTGACATTGA+AGG | + | chr1.2:76572835-76572854 | None:intergenic | 40.0% | |
| GGTGAAACTCTAACTGAAGT+AGG | - | chr1.2:76574040-76574059 | MS.gene34384:intron | 40.0% | |
| GTGTTCGTTTGAACGAAACA+AGG | - | chr1.2:76574015-76574034 | MS.gene34384:intron | 40.0% | |
| GTTGAAGAATGCATGGAGAA+GGG | + | chr1.2:76571763-76571782 | None:intergenic | 40.0% | |
| TACATGTGGTAGATGTGAAG+AGG | + | chr1.2:76571810-76571829 | None:intergenic | 40.0% | |
| TACTCAAGAACATGATCCTC+TGG | + | chr1.2:76573375-76573394 | None:intergenic | 40.0% | |
| TAGAAGCGAAAGCAGAATCA+CGG | + | chr1.2:76573734-76573753 | None:intergenic | 40.0% | |
| TATGAGTGAAAATGGTGAGG+TGG | + | chr1.2:76572471-76572490 | None:intergenic | 40.0% | |
| TCGTTTGAACGAAACAAGGA+TGG | - | chr1.2:76574019-76574038 | MS.gene34384:intron | 40.0% | |
| TGATGGTCTGATAGGTGTAA+TGG | - | chr1.2:76572635-76572654 | MS.gene34384:CDS | 40.0% | |
| TGCTTCCTTTGCATCTTGAT+TGG | + | chr1.2:76572595-76572614 | None:intergenic | 40.0% | |
| TTAAGGACCAAGTTAAGTGG+AGG | - | chr1.2:76572901-76572920 | MS.gene34384:intron | 40.0% | |
| TTAAGTGGAGGACTGATGTA+AGG | - | chr1.2:76572913-76572932 | MS.gene34384:intron | 40.0% | |
| TTGAAGAATGCATGGAGAAG+GGG | + | chr1.2:76571762-76571781 | None:intergenic | 40.0% | |
| TTGCCCAAATTGGTCCTTAA+AGG | - | chr1.2:76572849-76572868 | MS.gene34384:intron | 40.0% | |
| TTTCATCTTGTCTTGCCTTG+AGG | - | chr1.2:76572730-76572749 | MS.gene34384:intron | 40.0% | |
| TTTCTTTCAATTGGAGGAGG+AGG | - | chr1.2:76572043-76572062 | MS.gene34384:CDS | 40.0% | |
| ! | GGGAGGTCAAAGTATTTGAT+TGG | - | chr1.2:76573322-76573341 | MS.gene34384:intron | 40.0% |
| ! | GGTTTGAAAGGAAGTACATG+TGG | + | chr1.2:76571824-76571843 | None:intergenic | 40.0% |
| ! | GTGATCTTTCGAGAGCTTTT+AGG | - | chr1.2:76573929-76573948 | MS.gene34384:intron | 40.0% |
| ! | TCCCTTTTCAGCTTGATGTT+TGG | - | chr1.2:76571919-76571938 | MS.gene34384:CDS | 40.0% |
| ! | TTAGAGTATTTCGTGAGCAG+TGG | - | chr1.2:76573664-76573683 | MS.gene34384:intron | 40.0% |
| !! | AGATATTTCTGGTATCTGGC+AGG | - | chr1.2:76573773-76573792 | MS.gene34384:intron | 40.0% |
| !! | GATATTTCTGGTATCTGGCA+GGG | - | chr1.2:76573774-76573793 | MS.gene34384:intron | 40.0% |
| !!! | GCTGTTGATTTTTTCCACCT+TGG | - | chr1.2:76573026-76573045 | MS.gene34384:intron | 40.0% |
| !!! | GTAGGATGGGTTTTAGATCA+AGG | - | chr1.2:76574058-76574077 | MS.gene34384:CDS | 40.0% |
| AAAGCTCTCGAAAGATCACC+TGG | + | chr1.2:76573928-76573947 | None:intergenic | 45.0% | |
| AAGAGAGGTCCTTACACTTC+CGG | + | chr1.2:76573835-76573854 | None:intergenic | 45.0% | |
| AATACAGAGATGGAGCTGCA+AGG | - | chr1.2:76573639-76573658 | MS.gene34384:intron | 45.0% | |
| ACTGTATACCGTAGCAGCAT+CGG | + | chr1.2:76573436-76573455 | None:intergenic | 45.0% | |
| ATGTGAAGAGGATGGAAGAG+TGG | + | chr1.2:76571798-76571817 | None:intergenic | 45.0% | |
| CAACATAAGAGCCACTGGAT+TGG | + | chr1.2:76573512-76573531 | None:intergenic | 45.0% | |
| CAGAGTTCACTGCAGCAAAA+AGG | - | chr1.2:76571982-76572001 | MS.gene34384:intron | 45.0% | |
| CATCAGTCCTCCACTTAACT+TGG | + | chr1.2:76572911-76572930 | None:intergenic | 45.0% | |
| GAACGTGGTTGAAGAATGCA+TGG | + | chr1.2:76571770-76571789 | None:intergenic | 45.0% | |
| GACGTTTGCAGAGAAGAATG+AGG | + | chr1.2:76571732-76571751 | None:intergenic | 45.0% | |
| GGAGCAGACTTCAGTAATCA+AGG | - | chr1.2:76573249-76573268 | MS.gene34384:CDS | 45.0% | |
| GGTAATTGAACTGCCAGAGT+CGG | - | chr1.2:76573275-76573294 | MS.gene34384:CDS | 45.0% | |
| GGTTGAAGAATGCATGGAGA+AGG | + | chr1.2:76571764-76571783 | None:intergenic | 45.0% | |
| GTATTTCGTGAGCAGTGGTA+TGG | - | chr1.2:76573669-76573688 | MS.gene34384:intron | 45.0% | |
| GTGGCTCTTATGTTGCTGTA+TGG | - | chr1.2:76573517-76573536 | MS.gene34384:intron | 45.0% | |
| GTTCAGTTACTTCCCACTGT+TGG | - | chr1.2:76573402-76573421 | MS.gene34384:intron | 45.0% | |
| TACAGCAACATAAGAGCCAC+TGG | + | chr1.2:76573517-76573536 | None:intergenic | 45.0% | |
| TGCAGCCAATCAAGATGCAA+AGG | - | chr1.2:76572587-76572606 | MS.gene34384:CDS | 45.0% | |
| TGCTGCTACGGTATACAGTT+CGG | - | chr1.2:76573437-76573456 | MS.gene34384:intron | 45.0% | |
| TGGACTTAGAACTGCTCTGA+AGG | - | chr1.2:76573158-76573177 | MS.gene34384:intron | 45.0% | |
| TGGTATGGACCGTTCAGAAA+TGG | - | chr1.2:76573684-76573703 | MS.gene34384:intron | 45.0% | |
| TGTGGTAGATGTGAAGAGGA+TGG | + | chr1.2:76571806-76571825 | None:intergenic | 45.0% | |
| TTACACTTCCGGTGTCTGTA+GGG | + | chr1.2:76573824-76573843 | None:intergenic | 45.0% | |
| ! | ACTTTTAGCCCTACAGACAC+CGG | - | chr1.2:76573813-76573832 | MS.gene34384:CDS | 45.0% |
| ! | ATGGTCTGAAACCCAGCAAT+AGG | + | chr1.2:76572023-76572042 | None:intergenic | 45.0% |
| ! | ATTTGGGGCTTTCCTATTGC+TGG | - | chr1.2:76572008-76572027 | MS.gene34384:intron | 45.0% |
| ! | GGCGAAATTGATGGTCTGAT+AGG | - | chr1.2:76572627-76572646 | MS.gene34384:CDS | 45.0% |
| ! | TCAGGTGAATGGGATGGATT+TGG | - | chr1.2:76573228-76573247 | MS.gene34384:CDS | 45.0% |
| ! | TCGGATGAGAGAAAAGTGTG+CGG | - | chr1.2:76573456-76573475 | MS.gene34384:intron | 45.0% |
| ! | TTTGGGGCTTTCCTATTGCT+GGG | - | chr1.2:76572009-76572028 | MS.gene34384:intron | 45.0% |
| !! | ACTGGATTGGTAAGCAAAGG+CGG | + | chr1.2:76573499-76573518 | None:intergenic | 45.0% |
| !!! | ATGGGTTTTAGATCAAGGGC+AGG | - | chr1.2:76574063-76574082 | MS.gene34384:CDS | 45.0% |
| AATGCATGGAGAAGGGGAAG+TGG | + | chr1.2:76571756-76571775 | None:intergenic | 50.0% | |
| AATTGAACTGCCAGAGTCGG+TGG | - | chr1.2:76573278-76573297 | MS.gene34384:CDS | 50.0% | |
| ACTTCCCACTGTTGGATGTG+AGG | - | chr1.2:76573410-76573429 | MS.gene34384:intron | 50.0% | |
| ATCCTCTGGATCAGCAAGAG+TGG | + | chr1.2:76573361-76573380 | None:intergenic | 50.0% | |
| CTTACACTTCCGGTGTCTGT+AGG | + | chr1.2:76573825-76573844 | None:intergenic | 50.0% | |
| GCCTGAAGCATACCGAGAAT+GGG | - | chr1.2:76573302-76573321 | MS.gene34384:intron | 50.0% | |
| GCCTTTGCTTACCAATCCAG+TGG | - | chr1.2:76573498-76573517 | MS.gene34384:intron | 50.0% | |
| GGAAGAGTGGAGAAAGAACG+TGG | + | chr1.2:76571785-76571804 | None:intergenic | 50.0% | |
| TCCCATTCTCGGTATGCTTC+AGG | + | chr1.2:76573306-76573325 | None:intergenic | 50.0% | |
| TCCTCTGGATCAGCAAGAGT+GGG | + | chr1.2:76573360-76573379 | None:intergenic | 50.0% | |
| TGAAGCATACCGAGAATGGG+AGG | - | chr1.2:76573305-76573324 | MS.gene34384:intron | 50.0% | |
| TGCCTGAAGCATACCGAGAA+TGG | - | chr1.2:76573301-76573320 | MS.gene34384:intron | 50.0% | |
| ! | CTACAGACACCGGAAGTGTA+AGG | - | chr1.2:76573823-76573842 | MS.gene34384:CDS | 50.0% |
| !! | GCCACTGGATTGGTAAGCAA+AGG | + | chr1.2:76573502-76573521 | None:intergenic | 50.0% |
| AAAGTGTGCGGCGAAAGCAG+TGG | - | chr1.2:76573468-76573487 | MS.gene34384:intron | 55.0% | |
| ATCGGCCTCACATCCAACAG+TGG | + | chr1.2:76573418-76573437 | None:intergenic | 55.0% | |
| ATGTGAGGCCGATGCTGCTA+CGG | - | chr1.2:76573425-76573444 | MS.gene34384:intron | 55.0% | |
| CCTCTGGATCAGCAAGAGTG+GGG | + | chr1.2:76573359-76573378 | None:intergenic | 55.0% | |
| TCGGCCTCACATCCAACAGT+GGG | + | chr1.2:76573417-76573436 | None:intergenic | 55.0% | |
| ! | CTCAAGCACTGCAAAGCCGA+AGG | - | chr1.2:76574108-76574127 | MS.gene34384:CDS | 55.0% |
| CCCCACTCTTGCTGATCCAG+AGG | - | chr1.2:76573356-76573375 | MS.gene34384:intron | 60.0% | |
| !! | GCTTCAGGCACCACCGACTC+TGG | + | chr1.2:76573291-76573310 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 76571725 | 76574147 | 76571725 | ID=MS.gene34384 |
| chr1.2 | mRNA | 76571725 | 76574147 | 76571725 | ID=MS.gene34384.t1;Parent=MS.gene34384 |
| chr1.2 | exon | 76574046 | 76574147 | 76574046 | ID=MS.gene34384.t1.exon1;Parent=MS.gene34384.t1 |
| chr1.2 | CDS | 76574046 | 76574147 | 76574046 | ID=cds.MS.gene34384.t1;Parent=MS.gene34384.t1 |
| chr1.2 | exon | 76573808 | 76573887 | 76573808 | ID=MS.gene34384.t1.exon2;Parent=MS.gene34384.t1 |
| chr1.2 | CDS | 76573808 | 76573887 | 76573808 | ID=cds.MS.gene34384.t1;Parent=MS.gene34384.t1 |
| chr1.2 | exon | 76573195 | 76573300 | 76573195 | ID=MS.gene34384.t1.exon3;Parent=MS.gene34384.t1 |
| chr1.2 | CDS | 76573195 | 76573300 | 76573195 | ID=cds.MS.gene34384.t1;Parent=MS.gene34384.t1 |
| chr1.2 | exon | 76572033 | 76572692 | 76572033 | ID=MS.gene34384.t1.exon4;Parent=MS.gene34384.t1 |
| chr1.2 | CDS | 76572033 | 76572692 | 76572033 | ID=cds.MS.gene34384.t1;Parent=MS.gene34384.t1 |
| chr1.2 | exon | 76571725 | 76571943 | 76571725 | ID=MS.gene34384.t1.exon5;Parent=MS.gene34384.t1 |
| chr1.2 | CDS | 76571725 | 76571943 | 76571725 | ID=cds.MS.gene34384.t1;Parent=MS.gene34384.t1 |
| Gene Sequence |
| Protein sequence |
