Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56537.t1 | XP_003607716.2 | 97.1 | 339 | 10 | 0 | 1 | 339 | 1 | 339 | 2.50E-156 | 561.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56537.t1 | F4I274 | 52.3 | 310 | 107 | 10 | 1 | 296 | 18 | 300 | 1.5e-48 | 194.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56537.t1 | G7JF47 | 97.1 | 339 | 10 | 0 | 1 | 339 | 1 | 339 | 1.8e-156 | 561.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene56537.t1 | TF | GARP-G2-like |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene56537 | 0.844787 | 6.09E-59 | -1.69E-46 |
| MS.gene049254 | MS.gene56537 | 0.835167 | 1.96E-56 | -1.69E-46 |
| MS.gene049272 | MS.gene56537 | 0.805979 | 1.03E-49 | -1.69E-46 |
| MS.gene049343 | MS.gene56537 | 0.817258 | 3.62E-52 | -1.69E-46 |
| MS.gene049404 | MS.gene56537 | 0.833724 | 4.53E-56 | -1.69E-46 |
| MS.gene049435 | MS.gene56537 | 0.84257 | 2.39E-58 | -1.69E-46 |
| MS.gene049647 | MS.gene56537 | 0.80519 | 1.50E-49 | -1.69E-46 |
| MS.gene049669 | MS.gene56537 | 0.825317 | 5.01E-54 | -1.69E-46 |
| MS.gene049850 | MS.gene56537 | 0.828509 | 8.64E-55 | -1.69E-46 |
| MS.gene050026 | MS.gene56537 | 0.81192 | 5.50E-51 | -1.69E-46 |
| MS.gene050156 | MS.gene56537 | 0.828956 | 6.74E-55 | -1.69E-46 |
| MS.gene050226 | MS.gene56537 | 0.805093 | 1.58E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene56537 | 0.81594 | 7.15E-52 | -1.69E-46 |
| MS.gene050228 | MS.gene56537 | 0.812631 | 3.85E-51 | -1.69E-46 |
| MS.gene050355 | MS.gene56537 | 0.815062 | 1.12E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene56537 | 0.848882 | 4.62E-60 | -1.69E-46 |
| MS.gene050605 | MS.gene56537 | 0.817349 | 3.45E-52 | -1.69E-46 |
| MS.gene050680 | MS.gene56537 | 0.836255 | 1.04E-56 | -1.69E-46 |
| MS.gene050719 | MS.gene56537 | 0.821642 | 3.62E-53 | -1.69E-46 |
| MS.gene050721 | MS.gene56537 | 0.820676 | 6.05E-53 | -1.69E-46 |
| MS.gene050724 | MS.gene56537 | 0.820608 | 6.27E-53 | -1.69E-46 |
| MS.gene050750 | MS.gene56537 | 0.815813 | 7.63E-52 | -1.69E-46 |
| MS.gene050780 | MS.gene56537 | 0.810464 | 1.14E-50 | -1.69E-46 |
| MS.gene050787 | MS.gene56537 | 0.8004 | 1.47E-48 | -1.69E-46 |
| MS.gene050844 | MS.gene56537 | 0.856926 | 2.31E-62 | -1.69E-46 |
| MS.gene050953 | MS.gene56537 | 0.810065 | 1.39E-50 | -1.69E-46 |
| MS.gene051181 | MS.gene56537 | 0.803767 | 2.98E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene56537 | 0.816256 | 6.07E-52 | -1.69E-46 |
| MS.gene051210 | MS.gene56537 | 0.813205 | 2.88E-51 | -1.69E-46 |
| MS.gene051368 | MS.gene56537 | 0.824362 | 8.41E-54 | -1.69E-46 |
| MS.gene051388 | MS.gene56537 | 0.814232 | 1.71E-51 | -1.69E-46 |
| MS.gene051594 | MS.gene56537 | 0.806184 | 9.30E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene56537 | 0.802835 | 4.65E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene56537 | 0.804394 | 2.21E-49 | -1.69E-46 |
| MS.gene051800 | MS.gene56537 | 0.808808 | 2.58E-50 | -1.69E-46 |
| MS.gene051935 | MS.gene56537 | 0.81983 | 9.45E-53 | -1.69E-46 |
| MS.gene052012 | MS.gene56537 | 0.815415 | 9.36E-52 | -1.69E-46 |
| MS.gene052020 | MS.gene56537 | 0.818973 | 1.48E-52 | -1.69E-46 |
| MS.gene052042 | MS.gene56537 | 0.804585 | 2.01E-49 | -1.69E-46 |
| MS.gene052190 | MS.gene56537 | 0.860662 | 1.77E-63 | -1.69E-46 |
| MS.gene052323 | MS.gene56537 | 0.836027 | 1.19E-56 | -1.69E-46 |
| MS.gene052333 | MS.gene56537 | 0.852165 | 5.52E-61 | -1.69E-46 |
| MS.gene052384 | MS.gene56537 | 0.844383 | 7.82E-59 | -1.69E-46 |
| MS.gene052519 | MS.gene56537 | 0.853681 | 2.03E-61 | -1.69E-46 |
| MS.gene052582 | MS.gene56537 | 0.819656 | 1.04E-52 | -1.69E-46 |
| MS.gene052584 | MS.gene56537 | 0.81393 | 1.99E-51 | -1.69E-46 |
| MS.gene052586 | MS.gene56537 | 0.813569 | 2.40E-51 | -1.69E-46 |
| MS.gene052611 | MS.gene56537 | 0.851127 | 1.09E-60 | -1.69E-46 |
| MS.gene052612 | MS.gene56537 | 0.80735 | 5.28E-50 | -1.69E-46 |
| MS.gene052773 | MS.gene56537 | 0.850748 | 1.39E-60 | -1.69E-46 |
| MS.gene052863 | MS.gene56537 | 0.852226 | 5.30E-61 | -1.69E-46 |
| MS.gene052896 | MS.gene56537 | 0.825752 | 3.95E-54 | -1.69E-46 |
| MS.gene053008 | MS.gene56537 | 0.831668 | 1.46E-55 | -1.69E-46 |
| MS.gene053054 | MS.gene56537 | -0.80396 | 2.72E-49 | -1.69E-46 |
| MS.gene053166 | MS.gene56537 | 0.851129 | 1.09E-60 | -1.69E-46 |
| MS.gene053201 | MS.gene56537 | 0.827633 | 1.40E-54 | -1.69E-46 |
| MS.gene053221 | MS.gene56537 | 0.814663 | 1.37E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene56537 | 0.843824 | 1.10E-58 | -1.69E-46 |
| MS.gene053565 | MS.gene56537 | 0.80548 | 1.31E-49 | -1.69E-46 |
| MS.gene053966 | MS.gene56537 | 0.80544 | 1.33E-49 | -1.69E-46 |
| MS.gene053998 | MS.gene56537 | 0.808685 | 2.74E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene56537 | 0.836712 | 7.97E-57 | -1.69E-46 |
| MS.gene054236 | MS.gene56537 | 0.823017 | 1.74E-53 | -1.69E-46 |
| MS.gene054291 | MS.gene56537 | -0.831769 | 1.38E-55 | -1.69E-46 |
| MS.gene054405 | MS.gene56537 | 0.804099 | 2.54E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene56537 | 0.853363 | 2.51E-61 | -1.69E-46 |
| MS.gene054468 | MS.gene56537 | 0.872699 | 2.60E-67 | -1.69E-46 |
| MS.gene054472 | MS.gene56537 | 0.808001 | 3.84E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene56537 | 0.820652 | 6.12E-53 | -1.69E-46 |
| MS.gene054559 | MS.gene56537 | 0.831265 | 1.84E-55 | -1.69E-46 |
| MS.gene054651 | MS.gene56537 | 0.841567 | 4.40E-58 | -1.69E-46 |
| MS.gene054657 | MS.gene56537 | 0.806241 | 9.05E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene56537 | 0.811206 | 7.86E-51 | -1.69E-46 |
| MS.gene054775 | MS.gene56537 | 0.835871 | 1.30E-56 | -1.69E-46 |
| MS.gene05510 | MS.gene56537 | 0.817367 | 3.42E-52 | -1.69E-46 |
| MS.gene055166 | MS.gene56537 | 0.800464 | 1.42E-48 | -1.69E-46 |
| MS.gene055227 | MS.gene56537 | 0.824028 | 1.01E-53 | -1.69E-46 |
| MS.gene055228 | MS.gene56537 | 0.806845 | 6.75E-50 | -1.69E-46 |
| MS.gene055356 | MS.gene56537 | 0.836932 | 7.00E-57 | -1.69E-46 |
| MS.gene055357 | MS.gene56537 | 0.836725 | 7.91E-57 | -1.69E-46 |
| MS.gene055358 | MS.gene56537 | 0.841442 | 4.74E-58 | -1.69E-46 |
| MS.gene055363 | MS.gene56537 | 0.81078 | 9.72E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene56537 | 0.832012 | 1.20E-55 | -1.69E-46 |
| MS.gene055778 | MS.gene56537 | 0.807465 | 4.99E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene56537 | 0.862907 | 3.63E-64 | -1.69E-46 |
| MS.gene055926 | MS.gene56537 | 0.819659 | 1.03E-52 | -1.69E-46 |
| MS.gene05604 | MS.gene56537 | 0.821497 | 3.91E-53 | -1.69E-46 |
| MS.gene056050 | MS.gene56537 | 0.830788 | 2.41E-55 | -1.69E-46 |
| MS.gene056162 | MS.gene56537 | 0.820809 | 5.64E-53 | -1.69E-46 |
| MS.gene056173 | MS.gene56537 | 0.83201 | 1.21E-55 | -1.69E-46 |
| MS.gene056174 | MS.gene56537 | 0.8161 | 6.58E-52 | -1.69E-46 |
| MS.gene056252 | MS.gene56537 | 0.802945 | 4.41E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene56537 | 0.821579 | 3.75E-53 | -1.69E-46 |
| MS.gene056373 | MS.gene56537 | 0.804766 | 1.85E-49 | -1.69E-46 |
| MS.gene056506 | MS.gene56537 | 0.837831 | 4.12E-57 | -1.69E-46 |
| MS.gene056595 | MS.gene56537 | 0.815048 | 1.13E-51 | -1.69E-46 |
| MS.gene057021 | MS.gene56537 | 0.806588 | 7.65E-50 | -1.69E-46 |
| MS.gene057026 | MS.gene56537 | 0.839835 | 1.25E-57 | -1.69E-46 |
| MS.gene057060 | MS.gene56537 | 0.805306 | 1.42E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene56537 | 0.804835 | 1.79E-49 | -1.69E-46 |
| MS.gene057314 | MS.gene56537 | 0.81229 | 4.57E-51 | -1.69E-46 |
| MS.gene057414 | MS.gene56537 | 0.808211 | 3.46E-50 | -1.69E-46 |
| MS.gene057444 | MS.gene56537 | 0.809838 | 1.55E-50 | -1.69E-46 |
| MS.gene057598 | MS.gene56537 | 0.802405 | 5.70E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene56537 | 0.819499 | 1.13E-52 | -1.69E-46 |
| MS.gene057869 | MS.gene56537 | 0.820471 | 6.74E-53 | -1.69E-46 |
| MS.gene057915 | MS.gene56537 | 0.830438 | 2.94E-55 | -1.69E-46 |
| MS.gene057980 | MS.gene56537 | 0.802594 | 5.21E-49 | -1.69E-46 |
| MS.gene058009 | MS.gene56537 | 0.817579 | 3.07E-52 | -1.69E-46 |
| MS.gene058037 | MS.gene56537 | 0.800424 | 1.45E-48 | -1.69E-46 |
| MS.gene058548 | MS.gene56537 | 0.805373 | 1.38E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene56537 | 0.847566 | 1.07E-59 | -1.69E-46 |
| MS.gene058636 | MS.gene56537 | 0.829525 | 4.90E-55 | -1.69E-46 |
| MS.gene058829 | MS.gene56537 | 0.832157 | 1.11E-55 | -1.69E-46 |
| MS.gene058979 | MS.gene56537 | 0.857161 | 1.97E-62 | -1.69E-46 |
| MS.gene059128 | MS.gene56537 | 0.832641 | 8.42E-56 | -1.69E-46 |
| MS.gene059272 | MS.gene56537 | 0.819924 | 8.99E-53 | -1.69E-46 |
| MS.gene059306 | MS.gene56537 | 0.801357 | 9.36E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene56537 | 0.813779 | 2.15E-51 | -1.69E-46 |
| MS.gene059789 | MS.gene56537 | 0.824733 | 6.88E-54 | -1.69E-46 |
| MS.gene059842 | MS.gene56537 | 0.833441 | 5.32E-56 | -1.69E-46 |
| MS.gene060011 | MS.gene56537 | 0.826932 | 2.07E-54 | -1.69E-46 |
| MS.gene060310 | MS.gene56537 | 0.806523 | 7.89E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene56537 | 0.861707 | 8.49E-64 | -1.69E-46 |
| MS.gene060521 | MS.gene56537 | 0.81806 | 2.39E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene56537 | 0.839596 | 1.44E-57 | -1.69E-46 |
| MS.gene060572 | MS.gene56537 | 0.824757 | 6.79E-54 | -1.69E-46 |
| MS.gene060683 | MS.gene56537 | 0.825464 | 4.62E-54 | -1.69E-46 |
| MS.gene060685 | MS.gene56537 | 0.82693 | 2.07E-54 | -1.69E-46 |
| MS.gene060781 | MS.gene56537 | 0.818909 | 1.53E-52 | -1.69E-46 |
| MS.gene060803 | MS.gene56537 | 0.824427 | 8.12E-54 | -1.69E-46 |
| MS.gene060998 | MS.gene56537 | 0.801539 | 8.59E-49 | -1.69E-46 |
| MS.gene061040 | MS.gene56537 | -0.817126 | 3.88E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56537.t1 | MTR_4g081710 | 97.935 | 339 | 7 | 0 | 1 | 339 | 1 | 339 | 0.0 | 683 |
| MS.gene56537.t1 | MTR_5g041350 | 62.108 | 351 | 116 | 6 | 4 | 339 | 2 | 350 | 1.41e-128 | 372 |
| MS.gene56537.t1 | MTR_5g041350 | 54.615 | 260 | 102 | 5 | 94 | 339 | 4 | 261 | 6.71e-69 | 216 |
| MS.gene56537.t1 | MTR_2g086450 | 50.000 | 238 | 99 | 5 | 10 | 237 | 38 | 265 | 2.72e-67 | 216 |
| MS.gene56537.t1 | MTR_6g032990 | 40.054 | 367 | 174 | 9 | 10 | 337 | 35 | 394 | 2.84e-62 | 204 |
| MS.gene56537.t1 | MTR_5g041350 | 53.942 | 241 | 95 | 5 | 113 | 339 | 1 | 239 | 5.55e-60 | 193 |
| MS.gene56537.t1 | MTR_6g444980 | 50.829 | 181 | 73 | 4 | 10 | 183 | 28 | 199 | 4.51e-52 | 176 |
| MS.gene56537.t1 | MTR_5g027440 | 47.059 | 187 | 88 | 4 | 7 | 189 | 15 | 194 | 1.82e-48 | 164 |
| MS.gene56537.t1 | MTR_6g444980 | 55.245 | 143 | 54 | 3 | 10 | 151 | 28 | 161 | 9.67e-46 | 159 |
| MS.gene56537.t1 | MTR_7g088070 | 51.235 | 162 | 70 | 3 | 16 | 177 | 49 | 201 | 2.61e-45 | 156 |
| MS.gene56537.t1 | MTR_2g027860 | 48.780 | 164 | 60 | 4 | 17 | 173 | 49 | 195 | 4.65e-44 | 154 |
| MS.gene56537.t1 | MTR_7g088070 | 50.617 | 162 | 67 | 4 | 16 | 177 | 49 | 197 | 7.26e-44 | 152 |
| MS.gene56537.t1 | MTR_2g027800 | 40.756 | 238 | 116 | 7 | 10 | 232 | 32 | 259 | 3.43e-42 | 149 |
| MS.gene56537.t1 | MTR_2g027800 | 40.000 | 235 | 108 | 6 | 10 | 232 | 32 | 245 | 8.64e-41 | 145 |
| MS.gene56537.t1 | MTR_1g090670 | 41.667 | 228 | 105 | 7 | 10 | 231 | 37 | 242 | 6.74e-40 | 142 |
| MS.gene56537.t1 | MTR_7g098250 | 45.890 | 146 | 64 | 3 | 13 | 156 | 258 | 390 | 3.91e-36 | 136 |
| MS.gene56537.t1 | MTR_1g080330 | 42.604 | 169 | 77 | 4 | 13 | 175 | 171 | 325 | 9.10e-36 | 134 |
| MS.gene56537.t1 | MTR_7g115530 | 36.170 | 235 | 113 | 7 | 17 | 247 | 218 | 419 | 6.06e-35 | 132 |
| MS.gene56537.t1 | MTR_1g053835 | 42.282 | 149 | 71 | 3 | 13 | 160 | 254 | 388 | 3.87e-33 | 127 |
| MS.gene56537.t1 | MTR_7g093030 | 36.306 | 157 | 84 | 3 | 16 | 170 | 211 | 353 | 2.51e-29 | 116 |
| MS.gene56537.t1 | MTR_7g115530 | 45.528 | 123 | 50 | 3 | 17 | 136 | 218 | 326 | 7.67e-27 | 108 |
| MS.gene56537.t1 | MTR_1g080330 | 43.651 | 126 | 54 | 3 | 13 | 135 | 171 | 282 | 2.26e-26 | 106 |
| MS.gene56537.t1 | MTR_7g068600 | 39.041 | 146 | 71 | 4 | 13 | 153 | 9 | 141 | 2.46e-25 | 102 |
| MS.gene56537.t1 | MTR_1g053800 | 37.762 | 143 | 77 | 3 | 12 | 154 | 172 | 302 | 1.11e-21 | 94.4 |
| MS.gene56537.t1 | MTR_7g115530 | 53.333 | 75 | 33 | 1 | 17 | 89 | 218 | 292 | 6.91e-21 | 91.7 |
| MS.gene56537.t1 | MTR_7g115530 | 47.436 | 78 | 36 | 1 | 17 | 89 | 218 | 295 | 2.84e-20 | 90.9 |
| MS.gene56537.t1 | MTR_7g093030 | 55.172 | 58 | 26 | 0 | 16 | 73 | 211 | 268 | 1.04e-18 | 85.5 |
| MS.gene56537.t1 | MTR_7g115530 | 61.538 | 52 | 20 | 0 | 17 | 68 | 218 | 269 | 3.22e-18 | 83.6 |
| MS.gene56537.t1 | MTR_1g090670 | 36.508 | 189 | 92 | 7 | 49 | 231 | 1 | 167 | 1.35e-17 | 80.9 |
| MS.gene56537.t1 | MTR_7g115530 | 58.491 | 53 | 22 | 0 | 17 | 69 | 218 | 270 | 1.91e-17 | 81.6 |
| MS.gene56537.t1 | MTR_1g053830 | 47.541 | 61 | 32 | 0 | 13 | 73 | 14 | 74 | 4.02e-17 | 76.3 |
| MS.gene56537.t1 | MTR_6g071625 | 40.860 | 93 | 49 | 2 | 18 | 104 | 203 | 295 | 1.07e-15 | 77.4 |
| MS.gene56537.t1 | MTR_8g066310 | 37.838 | 111 | 67 | 2 | 18 | 128 | 174 | 282 | 1.33e-15 | 77.0 |
| MS.gene56537.t1 | MTR_7g069660 | 56.604 | 53 | 23 | 0 | 18 | 70 | 72 | 124 | 2.69e-15 | 76.3 |
| MS.gene56537.t1 | MTR_3g450310 | 49.180 | 61 | 31 | 0 | 17 | 77 | 19 | 79 | 8.71e-15 | 72.8 |
| MS.gene56537.t1 | MTR_1g112370 | 60.377 | 53 | 21 | 0 | 18 | 70 | 23 | 75 | 9.41e-15 | 74.3 |
| MS.gene56537.t1 | MTR_0223s0040 | 45.679 | 81 | 41 | 1 | 18 | 95 | 19 | 99 | 9.70e-15 | 73.9 |
| MS.gene56537.t1 | MTR_2g023580 | 50.000 | 60 | 30 | 0 | 18 | 77 | 56 | 115 | 1.02e-14 | 73.2 |
| MS.gene56537.t1 | MTR_4g121020 | 55.932 | 59 | 25 | 1 | 13 | 71 | 211 | 268 | 2.37e-14 | 74.3 |
| MS.gene56537.t1 | MTR_4g121020 | 55.932 | 59 | 25 | 1 | 13 | 71 | 211 | 268 | 2.39e-14 | 74.3 |
| MS.gene56537.t1 | MTR_4g121020 | 55.932 | 59 | 25 | 1 | 13 | 71 | 107 | 164 | 2.48e-14 | 74.3 |
| MS.gene56537.t1 | MTR_2g034960 | 52.857 | 70 | 26 | 2 | 13 | 76 | 207 | 275 | 3.32e-14 | 73.9 |
| MS.gene56537.t1 | MTR_5g029470 | 44.048 | 84 | 46 | 1 | 18 | 101 | 220 | 302 | 3.60e-14 | 73.2 |
| MS.gene56537.t1 | MTR_4g021790 | 54.545 | 55 | 24 | 1 | 17 | 71 | 168 | 221 | 5.01e-14 | 71.6 |
| MS.gene56537.t1 | MTR_3g064840 | 47.826 | 69 | 36 | 0 | 18 | 86 | 275 | 343 | 5.56e-14 | 72.8 |
| MS.gene56537.t1 | MTR_1g021520 | 52.632 | 57 | 27 | 0 | 18 | 74 | 127 | 183 | 9.49e-14 | 71.2 |
| MS.gene56537.t1 | MTR_8g086410 | 51.786 | 56 | 27 | 0 | 18 | 73 | 112 | 167 | 1.06e-13 | 72.0 |
| MS.gene56537.t1 | MTR_8g086410 | 51.786 | 56 | 27 | 0 | 18 | 73 | 110 | 165 | 1.13e-13 | 72.0 |
| MS.gene56537.t1 | MTR_1g032570 | 52.542 | 59 | 27 | 1 | 13 | 71 | 127 | 184 | 1.43e-13 | 72.0 |
| MS.gene56537.t1 | MTR_5g017980 | 42.697 | 89 | 50 | 1 | 17 | 105 | 193 | 280 | 1.43e-13 | 70.9 |
| MS.gene56537.t1 | MTR_1g032570 | 52.542 | 59 | 27 | 1 | 13 | 71 | 196 | 253 | 1.59e-13 | 72.0 |
| MS.gene56537.t1 | MTR_2g016220 | 54.717 | 53 | 24 | 0 | 18 | 70 | 90 | 142 | 1.72e-13 | 71.2 |
| MS.gene56537.t1 | MTR_2g084230 | 50.794 | 63 | 28 | 1 | 18 | 77 | 98 | 160 | 1.81e-13 | 70.9 |
| MS.gene56537.t1 | MTR_2g084230 | 50.794 | 63 | 28 | 1 | 18 | 77 | 98 | 160 | 1.82e-13 | 70.5 |
| MS.gene56537.t1 | MTR_2g016220 | 54.717 | 53 | 24 | 0 | 18 | 70 | 90 | 142 | 1.93e-13 | 70.9 |
| MS.gene56537.t1 | MTR_1g093080 | 58.182 | 55 | 23 | 0 | 17 | 71 | 211 | 265 | 8.86e-13 | 68.9 |
| MS.gene56537.t1 | MTR_4g131600 | 49.153 | 59 | 29 | 1 | 13 | 71 | 197 | 254 | 1.15e-12 | 69.3 |
| MS.gene56537.t1 | MTR_7g093010 | 32.593 | 135 | 81 | 2 | 17 | 151 | 213 | 337 | 1.30e-12 | 68.2 |
| MS.gene56537.t1 | MTR_8g086410 | 43.077 | 65 | 33 | 1 | 18 | 78 | 112 | 176 | 1.69e-12 | 68.2 |
| MS.gene56537.t1 | MTR_4g021855 | 52.727 | 55 | 25 | 1 | 17 | 71 | 168 | 221 | 2.28e-12 | 67.0 |
| MS.gene56537.t1 | MTR_2g016220 | 45.161 | 62 | 33 | 1 | 18 | 78 | 90 | 151 | 4.18e-12 | 67.0 |
| MS.gene56537.t1 | MTR_2g450070 | 49.153 | 59 | 29 | 1 | 13 | 71 | 209 | 266 | 5.37e-12 | 67.4 |
| MS.gene56537.t1 | MTR_2g450070 | 49.153 | 59 | 29 | 1 | 13 | 71 | 209 | 266 | 5.45e-12 | 67.4 |
| MS.gene56537.t1 | MTR_4g021760 | 51.852 | 54 | 25 | 1 | 17 | 70 | 169 | 221 | 7.24e-12 | 65.9 |
| MS.gene56537.t1 | MTR_7g089010 | 52.727 | 55 | 25 | 1 | 17 | 71 | 91 | 144 | 1.10e-11 | 65.1 |
| MS.gene56537.t1 | MTR_4g064730 | 43.421 | 76 | 36 | 2 | 14 | 83 | 128 | 202 | 1.25e-11 | 65.1 |
| MS.gene56537.t1 | MTR_4g086835 | 44.000 | 75 | 41 | 1 | 14 | 88 | 271 | 344 | 1.33e-11 | 65.5 |
| MS.gene56537.t1 | MTR_1g013170 | 43.056 | 72 | 38 | 2 | 17 | 88 | 191 | 259 | 2.09e-11 | 65.1 |
| MS.gene56537.t1 | MTR_4g113140 | 50.000 | 58 | 29 | 0 | 14 | 71 | 232 | 289 | 8.23e-11 | 63.2 |
| MS.gene56537.t1 | MTR_5g054300 | 52.727 | 55 | 26 | 0 | 17 | 71 | 198 | 252 | 9.35e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56537.t1 | AT1G69580 | 50.163 | 307 | 118 | 10 | 1 | 296 | 18 | 300 | 5.66e-81 | 250 |
| MS.gene56537.t1 | AT1G69580 | 49.351 | 308 | 120 | 10 | 1 | 296 | 18 | 301 | 2.47e-79 | 246 |
| MS.gene56537.t1 | AT3G04030 | 51.502 | 233 | 97 | 5 | 10 | 234 | 38 | 262 | 2.37e-65 | 211 |
| MS.gene56537.t1 | AT5G18240 | 49.351 | 231 | 105 | 5 | 10 | 234 | 38 | 262 | 2.54e-62 | 204 |
| MS.gene56537.t1 | AT5G18240 | 49.351 | 231 | 105 | 5 | 10 | 234 | 38 | 262 | 2.54e-62 | 204 |
| MS.gene56537.t1 | AT3G04030 | 50.644 | 233 | 98 | 6 | 10 | 234 | 38 | 261 | 3.22e-62 | 203 |
| MS.gene56537.t1 | AT5G18240 | 48.485 | 231 | 105 | 6 | 10 | 234 | 38 | 260 | 6.74e-59 | 195 |
| MS.gene56537.t1 | AT3G04030 | 49.356 | 233 | 96 | 6 | 10 | 234 | 38 | 256 | 1.24e-58 | 194 |
| MS.gene56537.t1 | AT3G24120 | 46.053 | 228 | 111 | 4 | 10 | 228 | 34 | 258 | 1.85e-58 | 191 |
| MS.gene56537.t1 | AT4G13640 | 49.130 | 230 | 99 | 7 | 10 | 229 | 30 | 251 | 2.96e-58 | 190 |
| MS.gene56537.t1 | AT3G24120 | 45.455 | 231 | 111 | 5 | 10 | 228 | 34 | 261 | 3.05e-56 | 185 |
| MS.gene56537.t1 | AT4G13640 | 48.498 | 233 | 99 | 8 | 10 | 229 | 30 | 254 | 5.05e-56 | 184 |
| MS.gene56537.t1 | AT5G18240 | 47.186 | 231 | 104 | 6 | 10 | 234 | 38 | 256 | 1.24e-55 | 186 |
| MS.gene56537.t1 | AT5G18240 | 47.186 | 231 | 104 | 6 | 10 | 234 | 38 | 256 | 1.24e-55 | 186 |
| MS.gene56537.t1 | AT1G79430 | 53.247 | 154 | 64 | 1 | 10 | 163 | 27 | 172 | 1.25e-49 | 169 |
| MS.gene56537.t1 | AT5G45580 | 48.734 | 158 | 74 | 3 | 11 | 161 | 1 | 158 | 2.18e-44 | 153 |
| MS.gene56537.t1 | AT5G45580 | 48.428 | 159 | 75 | 3 | 10 | 161 | 16 | 174 | 2.37e-44 | 154 |
| MS.gene56537.t1 | AT2G01060 | 47.531 | 162 | 66 | 4 | 16 | 172 | 14 | 161 | 7.11e-43 | 150 |
| MS.gene56537.t1 | AT3G12730 | 50.000 | 152 | 71 | 3 | 10 | 160 | 16 | 163 | 1.25e-42 | 148 |
| MS.gene56537.t1 | AT3G04030 | 46.907 | 194 | 87 | 5 | 49 | 234 | 1 | 186 | 7.80e-40 | 143 |
| MS.gene56537.t1 | AT3G04450 | 40.606 | 165 | 88 | 3 | 13 | 176 | 194 | 349 | 9.65e-35 | 131 |
| MS.gene56537.t1 | AT3G04450 | 40.606 | 165 | 88 | 3 | 13 | 176 | 194 | 349 | 9.65e-35 | 131 |
| MS.gene56537.t1 | AT3G04450 | 40.606 | 165 | 88 | 3 | 13 | 176 | 234 | 389 | 2.01e-34 | 131 |
| MS.gene56537.t1 | AT4G28610 | 42.169 | 166 | 79 | 4 | 16 | 179 | 224 | 374 | 3.04e-34 | 130 |
| MS.gene56537.t1 | AT5G29000 | 44.025 | 159 | 69 | 3 | 16 | 168 | 187 | 331 | 3.39e-34 | 129 |
| MS.gene56537.t1 | AT5G29000 | 44.025 | 159 | 69 | 3 | 16 | 168 | 187 | 331 | 3.39e-34 | 129 |
| MS.gene56537.t1 | AT5G29000 | 44.025 | 159 | 69 | 3 | 16 | 168 | 230 | 374 | 7.93e-34 | 129 |
| MS.gene56537.t1 | AT3G04030 | 44.330 | 194 | 86 | 6 | 49 | 234 | 1 | 180 | 3.10e-33 | 125 |
| MS.gene56537.t1 | AT5G06800 | 39.344 | 183 | 91 | 5 | 17 | 196 | 192 | 357 | 5.63e-32 | 123 |
| MS.gene56537.t1 | AT5G18240 | 42.188 | 192 | 93 | 6 | 49 | 234 | 1 | 180 | 6.39e-31 | 119 |
| MS.gene56537.t1 | AT5G06800 | 38.333 | 180 | 92 | 5 | 17 | 196 | 192 | 352 | 7.42e-31 | 120 |
| MS.gene56537.t1 | AT3G13040 | 37.895 | 190 | 101 | 5 | 13 | 196 | 237 | 415 | 1.30e-30 | 120 |
| MS.gene56537.t1 | AT3G13040 | 37.895 | 190 | 101 | 5 | 13 | 196 | 237 | 415 | 1.30e-30 | 120 |
| MS.gene56537.t1 | AT3G13040 | 37.895 | 190 | 101 | 5 | 13 | 196 | 237 | 415 | 1.30e-30 | 120 |
| MS.gene56537.t1 | AT2G20400 | 38.854 | 157 | 80 | 2 | 19 | 172 | 233 | 376 | 6.31e-30 | 118 |
| MS.gene56537.t1 | AT2G20400 | 39.490 | 157 | 78 | 3 | 19 | 172 | 233 | 375 | 2.74e-29 | 116 |
| MS.gene56537.t1 | AT1G79430 | 47.826 | 115 | 52 | 1 | 49 | 163 | 1 | 107 | 2.05e-26 | 106 |
| MS.gene56537.t1 | AT2G01060 | 42.857 | 126 | 53 | 4 | 52 | 172 | 1 | 112 | 9.32e-22 | 92.8 |
| MS.gene56537.t1 | AT3G04450 | 57.377 | 61 | 26 | 0 | 13 | 73 | 234 | 294 | 6.39e-20 | 89.0 |
| MS.gene56537.t1 | AT5G29000 | 56.897 | 58 | 25 | 0 | 16 | 73 | 230 | 287 | 2.70e-19 | 87.4 |
| MS.gene56537.t1 | AT3G12730 | 43.363 | 113 | 59 | 3 | 49 | 160 | 1 | 109 | 6.75e-19 | 83.6 |
| MS.gene56537.t1 | AT5G06800 | 54.386 | 57 | 26 | 0 | 17 | 73 | 192 | 248 | 8.97e-18 | 82.4 |
| MS.gene56537.t1 | AT2G06020 | 50.000 | 64 | 32 | 0 | 10 | 73 | 79 | 142 | 5.27e-17 | 80.9 |
| MS.gene56537.t1 | AT4G17695 | 49.275 | 69 | 35 | 0 | 18 | 86 | 165 | 233 | 3.81e-15 | 75.5 |
| MS.gene56537.t1 | AT1G32240 | 37.864 | 103 | 64 | 0 | 18 | 120 | 214 | 316 | 4.74e-15 | 75.9 |
| MS.gene56537.t1 | AT1G32240 | 47.222 | 72 | 38 | 0 | 18 | 89 | 214 | 285 | 5.21e-15 | 75.5 |
| MS.gene56537.t1 | AT1G14600 | 56.604 | 53 | 23 | 0 | 18 | 70 | 24 | 76 | 6.90e-15 | 73.9 |
| MS.gene56537.t1 | AT4G04605 | 52.830 | 53 | 25 | 0 | 18 | 70 | 15 | 67 | 1.44e-14 | 72.4 |
| MS.gene56537.t1 | AT2G38300 | 56.604 | 53 | 23 | 0 | 18 | 70 | 55 | 107 | 3.53e-14 | 72.8 |
| MS.gene56537.t1 | AT5G42630 | 49.231 | 65 | 27 | 1 | 18 | 82 | 106 | 164 | 3.81e-14 | 71.2 |
| MS.gene56537.t1 | AT5G16560 | 54.386 | 57 | 26 | 0 | 18 | 74 | 220 | 276 | 4.08e-14 | 73.2 |
| MS.gene56537.t1 | AT3G16857 | 56.364 | 55 | 23 | 1 | 17 | 71 | 167 | 220 | 7.31e-14 | 72.8 |
| MS.gene56537.t1 | AT2G02060 | 49.180 | 61 | 31 | 0 | 18 | 78 | 30 | 90 | 7.42e-14 | 70.9 |
| MS.gene56537.t1 | AT2G02060 | 49.180 | 61 | 31 | 0 | 18 | 78 | 30 | 90 | 7.42e-14 | 70.9 |
| MS.gene56537.t1 | AT5G42630 | 49.231 | 65 | 27 | 1 | 18 | 82 | 106 | 164 | 7.49e-14 | 71.2 |
| MS.gene56537.t1 | AT3G16857 | 56.364 | 55 | 23 | 1 | 17 | 71 | 237 | 290 | 8.38e-14 | 72.8 |
| MS.gene56537.t1 | AT3G16857 | 56.364 | 55 | 23 | 1 | 17 | 71 | 237 | 290 | 8.64e-14 | 72.8 |
| MS.gene56537.t1 | AT4G04580 | 52.830 | 53 | 25 | 0 | 18 | 70 | 15 | 67 | 1.03e-13 | 68.6 |
| MS.gene56537.t1 | AT2G42660 | 50.943 | 53 | 26 | 0 | 18 | 70 | 51 | 103 | 2.23e-13 | 69.7 |
| MS.gene56537.t1 | AT2G40260 | 49.153 | 59 | 30 | 0 | 18 | 76 | 83 | 141 | 3.94e-13 | 70.1 |
| MS.gene56537.t1 | AT5G45580 | 39.423 | 104 | 56 | 3 | 65 | 161 | 16 | 119 | 1.37e-12 | 66.6 |
| MS.gene56537.t1 | AT5G59570 | 50.000 | 58 | 28 | 1 | 14 | 71 | 138 | 194 | 1.78e-12 | 67.4 |
| MS.gene56537.t1 | AT5G59570 | 50.000 | 58 | 28 | 1 | 14 | 71 | 138 | 194 | 1.78e-12 | 67.4 |
| MS.gene56537.t1 | AT3G25790 | 47.619 | 63 | 33 | 0 | 22 | 84 | 201 | 263 | 1.80e-12 | 68.2 |
| MS.gene56537.t1 | AT5G05090 | 52.727 | 55 | 25 | 1 | 17 | 71 | 81 | 134 | 3.18e-12 | 66.2 |
| MS.gene56537.t1 | AT3G10760 | 52.727 | 55 | 25 | 1 | 17 | 71 | 105 | 158 | 4.18e-12 | 66.6 |
| MS.gene56537.t1 | AT2G40970 | 51.724 | 58 | 27 | 1 | 14 | 71 | 102 | 158 | 6.29e-12 | 65.1 |
| MS.gene56537.t1 | AT5G58080 | 53.448 | 58 | 26 | 1 | 14 | 71 | 191 | 247 | 6.30e-12 | 67.0 |
| MS.gene56537.t1 | AT3G46640 | 50.909 | 55 | 26 | 1 | 17 | 71 | 144 | 197 | 9.97e-12 | 65.5 |
| MS.gene56537.t1 | AT3G46640 | 50.909 | 55 | 26 | 1 | 17 | 71 | 144 | 197 | 1.06e-11 | 65.5 |
| MS.gene56537.t1 | AT3G46640 | 50.909 | 55 | 26 | 1 | 17 | 71 | 144 | 197 | 1.06e-11 | 65.5 |
| MS.gene56537.t1 | AT4G37180 | 50.943 | 53 | 26 | 0 | 19 | 71 | 212 | 264 | 1.09e-11 | 65.5 |
| MS.gene56537.t1 | AT2G25180 | 38.298 | 94 | 51 | 2 | 17 | 104 | 195 | 287 | 1.21e-11 | 66.2 |
| MS.gene56537.t1 | AT4G37180 | 50.943 | 53 | 26 | 0 | 19 | 71 | 219 | 271 | 1.22e-11 | 65.5 |
| MS.gene56537.t1 | AT2G01760 | 49.091 | 55 | 27 | 1 | 17 | 71 | 135 | 188 | 1.59e-11 | 64.7 |
| MS.gene56537.t1 | AT2G01760 | 49.091 | 55 | 27 | 1 | 17 | 71 | 200 | 253 | 2.16e-11 | 64.7 |
| MS.gene56537.t1 | AT1G67710 | 49.057 | 53 | 27 | 0 | 19 | 71 | 121 | 173 | 2.58e-11 | 64.7 |
| MS.gene56537.t1 | AT2G01760 | 49.091 | 55 | 27 | 1 | 17 | 71 | 228 | 281 | 3.06e-11 | 64.3 |
| MS.gene56537.t1 | AT1G67710 | 49.057 | 53 | 27 | 0 | 19 | 71 | 130 | 182 | 3.48e-11 | 64.3 |
| MS.gene56537.t1 | AT1G67710 | 49.057 | 53 | 27 | 0 | 19 | 71 | 195 | 247 | 3.64e-11 | 64.7 |
| MS.gene56537.t1 | AT1G68670 | 50.725 | 69 | 29 | 1 | 3 | 71 | 206 | 269 | 3.82e-11 | 63.9 |
| MS.gene56537.t1 | AT1G25550 | 51.724 | 58 | 28 | 0 | 14 | 71 | 206 | 263 | 4.00e-11 | 63.9 |
| MS.gene56537.t1 | AT1G49190 | 51.724 | 58 | 25 | 1 | 17 | 71 | 215 | 272 | 9.53e-11 | 63.2 |
Find 57 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTGAAATACTATTATAATT+TGG | 0.196696 | 4.4:-30688620 | None:intergenic |
| CTTCTGGCTCAATGGCCATT+AGG | 0.226035 | 4.4:-30688652 | None:intergenic |
| TTCTGGCTCAATGGCCATTA+GGG | 0.263854 | 4.4:-30688651 | None:intergenic |
| ATTACTCAGTGGTTTGGTTC+TGG | 0.295890 | 4.4:-30688013 | None:intergenic |
| GTTTCTGTTAGTTCTGAAAT+TGG | 0.299096 | 4.4:-30688461 | None:intergenic |
| AGTGTTCTCAGCCTCATTTA+TGG | 0.303454 | 4.4:-30688597 | None:intergenic |
| CCATCTTAAAAGTCATTTAC+AGG | 0.331529 | 4.4:+30687688 | MS.gene56537:CDS |
| AGCCAGAAGGAAGGTCATTC+AGG | 0.335489 | 4.4:+30688666 | MS.gene56537:CDS |
| TAATTGCATCAGTGAATCTT+TGG | 0.343412 | 4.4:-30687493 | None:intergenic |
| GTCCTGAATGACCTTCCTTC+TGG | 0.358063 | 4.4:-30688668 | None:intergenic |
| TTCAGTTGAATTGCCCCTAA+TGG | 0.373934 | 4.4:+30688637 | MS.gene56537:CDS |
| ACCTTGTTTGTTGTCAGAAC+AGG | 0.382827 | 4.4:-30687853 | None:intergenic |
| ATCACCCTCATCAAACTCTT+TGG | 0.386936 | 4.4:-30687641 | None:intergenic |
| TTAACTATTACTCAGTGGTT+TGG | 0.396613 | 4.4:-30688019 | None:intergenic |
| ATGAGGGTGATGGGAATTCC+AGG | 0.406362 | 4.4:+30687653 | MS.gene56537:CDS |
| AAAGAACCAAACGCATGCTT+TGG | 0.416759 | 4.4:-30687427 | None:intergenic |
| ATGCTAAGCCTAGGTTGAAA+TGG | 0.427329 | 4.4:+30687456 | MS.gene56537:CDS |
| AAGGCGCAGGAAGCACTTGC+AGG | 0.427854 | 4.4:+30688344 | MS.gene56537:CDS |
| AGTTCTTCTTCTTCGACAAC+GGG | 0.439097 | 4.4:+30688371 | MS.gene56537:CDS |
| GCAAAACCAAAGCATGCGTT+TGG | 0.448457 | 4.4:+30687421 | MS.gene56537:CDS |
| TGACCTTCCTTCTGGCTCAA+TGG | 0.470884 | 4.4:-30688660 | None:intergenic |
| AGTTCTGAAATTGGAGAACT+AGG | 0.474659 | 4.4:-30688452 | None:intergenic |
| GAAACTTTATGAACAAATTG+AGG | 0.475081 | 4.4:+30688168 | MS.gene56537:CDS |
| ACTGATGCAATTAATCAGCT+TGG | 0.488534 | 4.4:+30687503 | MS.gene56537:CDS |
| TAGACTTGGCAAAAGCCAAC+AGG | 0.499299 | 4.4:+30687791 | MS.gene56537:CDS |
| TAGTTCTTCTTCTTCGACAA+CGG | 0.505989 | 4.4:+30688370 | MS.gene56537:CDS |
| AATGCAAATGATGGAGGAAG+TGG | 0.507541 | 4.4:+30688692 | MS.gene56537:CDS |
| TGAGGCTCTTGAAGTACAAA+TGG | 0.509949 | 4.4:+30688135 | MS.gene56537:CDS |
| TTCAGGACTAATGCAAATGA+TGG | 0.510398 | 4.4:+30688683 | MS.gene56537:CDS |
| TCATGAGTCCATTTCAACCT+AGG | 0.511636 | 4.4:-30687464 | None:intergenic |
| AGATGGTACAAAGTGAGTCC+TGG | 0.514393 | 4.4:-30687671 | None:intergenic |
| CTTACAATCGGTACTAATGA+AGG | 0.524871 | 4.4:+30688325 | MS.gene56537:CDS |
| TTTCCACTGATGCTAAGCCT+AGG | 0.525101 | 4.4:+30687447 | MS.gene56537:CDS |
| AAGAGTTTGATGAGGGTGAT+GGG | 0.525589 | 4.4:+30687644 | MS.gene56537:CDS |
| CAACCTAGGCTTAGCATCAG+TGG | 0.529572 | 4.4:-30687450 | None:intergenic |
| TGCAGTAGAGAAATCAGTGT+TGG | 0.530962 | 4.4:+30687987 | MS.gene56537:CDS |
| TCAAGGAAAGTACTTACAAT+CGG | 0.534694 | 4.4:+30688313 | MS.gene56537:CDS |
| AAAGAGTTTGATGAGGGTGA+TGG | 0.538821 | 4.4:+30687643 | MS.gene56537:CDS |
| CAGTTTAGAATTGAAGCTCA+AGG | 0.543693 | 4.4:+30688296 | MS.gene56537:CDS |
| TGAAAGCTCCGAGAGAAAAG+AGG | 0.555833 | 4.4:+30688565 | MS.gene56537:CDS |
| GATGCAATTAATCAGCTTGG+AGG | 0.562956 | 4.4:+30687506 | MS.gene56537:CDS |
| TTAGTTTAAACTCTGGTGAG+AGG | 0.563350 | 4.4:+30688492 | MS.gene56537:CDS |
| GGTGAGAGGAAACAAAATAG+AGG | 0.570215 | 4.4:+30688506 | MS.gene56537:CDS |
| ATCGGTACTAATGAAGGCGC+AGG | 0.585210 | 4.4:+30688331 | MS.gene56537:CDS |
| TCAGAACTAACAGAAACAAG+AGG | 0.597866 | 4.4:+30688467 | MS.gene56537:CDS |
| ATAGAAATTCAAAACAGTGA+TGG | 0.607108 | 4.4:+30687960 | MS.gene56537:CDS |
| TCTGGCTCAATGGCCATTAG+GGG | 0.623024 | 4.4:-30688650 | None:intergenic |
| ACCTGTTCTGACAACAAACA+AGG | 0.624931 | 4.4:+30687852 | MS.gene56537:CDS |
| TTATTACAGAAATATAGACT+TGG | 0.629448 | 4.4:+30687777 | MS.gene56537:intron |
| AGGACTAATGCAAATGATGG+AGG | 0.631823 | 4.4:+30688686 | MS.gene56537:CDS |
| AGATGTGTTGATCAACCAGA+TGG | 0.635020 | 4.4:+30688749 | MS.gene56537:CDS |
| AACACCAAAGAGTTTGATGA+GGG | 0.637512 | 4.4:+30687637 | MS.gene56537:CDS |
| ATGCAAATGATGGAGGAAGT+GGG | 0.639201 | 4.4:+30688693 | MS.gene56537:CDS |
| TAGAAGCTTGAAGATTGCTG+AGG | 0.644476 | 4.4:+30688117 | MS.gene56537:intron |
| CAACACCAAAGAGTTTGATG+AGG | 0.646969 | 4.4:+30687636 | MS.gene56537:CDS |
| TGGCCATTGAGCCAGAAGGA+AGG | 0.652849 | 4.4:+30688657 | MS.gene56537:CDS |
| CTAATGGCCATTGAGCCAGA+AGG | 0.682174 | 4.4:+30688653 | MS.gene56537:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTGAAATACTATTATAATT+TGG | - | chr4.4:30688623-30688642 | None:intergenic | 15.0% |
| !! | TTATTACAGAAATATAGACT+TGG | + | chr4.4:30687777-30687796 | MS.gene56537:intron | 20.0% |
| ! | ATAGAAATTCAAAACAGTGA+TGG | + | chr4.4:30687960-30687979 | MS.gene56537:CDS | 25.0% |
| ! | ATGATTAAGGACATGTTAAT+CGG | + | chr4.4:30688240-30688259 | MS.gene56537:intron | 25.0% |
| ! | GAAACTTTATGAACAAATTG+AGG | + | chr4.4:30688168-30688187 | MS.gene56537:CDS | 25.0% |
| ! | TCAAATTAACTATTACTCAG+TGG | - | chr4.4:30688027-30688046 | None:intergenic | 25.0% |
| !! | TTTTTCACACTATGTATATG+TGG | + | chr4.4:30687607-30687626 | MS.gene56537:intron | 25.0% |
| !!! | AATCTTGAGTTATTGATTCA+TGG | + | chr4.4:30687927-30687946 | MS.gene56537:intron | 25.0% |
| !!! | TTTGAGCTTATTTGATTTTC+TGG | + | chr4.4:30687754-30687773 | MS.gene56537:intron | 25.0% |
| AAATATGTGGCAAAAAACTG+AGG | + | chr4.4:30688774-30688793 | MS.gene56537:CDS | 30.0% | |
| ATCAATACTCATTCCTATCT+AGG | + | chr4.4:30688208-30688227 | MS.gene56537:intron | 30.0% | |
| CCATCTTAAAAGTCATTTAC+AGG | + | chr4.4:30687688-30687707 | MS.gene56537:CDS | 30.0% | |
| GGAAAAACAAACCATAAATG+AGG | + | chr4.4:30688586-30688605 | MS.gene56537:CDS | 30.0% | |
| TAATTGCATCAGTGAATCTT+TGG | - | chr4.4:30687496-30687515 | None:intergenic | 30.0% | |
| TATGACAGTAATAGAATGAC+TGG | + | chr4.4:30687885-30687904 | MS.gene56537:intron | 30.0% | |
| TTAACTATTACTCAGTGGTT+TGG | - | chr4.4:30688022-30688041 | None:intergenic | 30.0% | |
| ! | GCTCAAACTCTTATAGTTTT+TGG | - | chr4.4:30687741-30687760 | None:intergenic | 30.0% |
| ! | TAGGTTTCAAGTGATGATTA+AGG | + | chr4.4:30688227-30688246 | MS.gene56537:intron | 30.0% |
| !! | CCTGTAAATGACTTTTAAGA+TGG | - | chr4.4:30687691-30687710 | None:intergenic | 30.0% |
| !! | GTTTCTGTTAGTTCTGAAAT+TGG | - | chr4.4:30688464-30688483 | None:intergenic | 30.0% |
| !! | TCAAGGAAAGTACTTACAAT+CGG | + | chr4.4:30688313-30688332 | MS.gene56537:CDS | 30.0% |
| !! | TTGTTTTTCCTCTTTTCTCT+CGG | - | chr4.4:30688576-30688595 | None:intergenic | 30.0% |
| !!! | AGAGGTTTTAGTTTAAACTC+TGG | + | chr4.4:30688485-30688504 | MS.gene56537:CDS | 30.0% |
| !!! | AGTGCAACTATTGATTTTGA+TGG | + | chr4.4:30688725-30688744 | MS.gene56537:CDS | 30.0% |
| AACACCAAAGAGTTTGATGA+GGG | + | chr4.4:30687637-30687656 | MS.gene56537:CDS | 35.0% | |
| ACTGATGCAATTAATCAGCT+TGG | + | chr4.4:30687503-30687522 | MS.gene56537:CDS | 35.0% | |
| CAACCAGATGGAAAAATATG+TGG | + | chr4.4:30688761-30688780 | MS.gene56537:CDS | 35.0% | |
| CTTACAATCGGTACTAATGA+AGG | + | chr4.4:30688325-30688344 | MS.gene56537:CDS | 35.0% | |
| TAGTTCTTCTTCTTCGACAA+CGG | + | chr4.4:30688370-30688389 | MS.gene56537:CDS | 35.0% | |
| TCAGAACTAACAGAAACAAG+AGG | + | chr4.4:30688467-30688486 | MS.gene56537:CDS | 35.0% | |
| TCATCACTTGAAACCTAGAT+AGG | - | chr4.4:30688224-30688243 | None:intergenic | 35.0% | |
| TGGCAAAAAACTGAGGAAAT+CGG | + | chr4.4:30688781-30688800 | MS.gene56537:CDS | 35.0% | |
| TTAGTTTAAACTCTGGTGAG+AGG | + | chr4.4:30688492-30688511 | MS.gene56537:CDS | 35.0% | |
| TTCAGGACTAATGCAAATGA+TGG | + | chr4.4:30688683-30688702 | MS.gene56537:CDS | 35.0% | |
| ! | CAGTTTAGAATTGAAGCTCA+AGG | + | chr4.4:30688296-30688315 | MS.gene56537:CDS | 35.0% |
| ! | TCGGTTTGAAACATGATTTC+AGG | + | chr4.4:30688259-30688278 | MS.gene56537:intron | 35.0% |
| ! | TGACTGGTAGTTTTCTGATT+TGG | + | chr4.4:30687901-30687920 | MS.gene56537:intron | 35.0% |
| ! | TTGCCACATATTTTTCCATC+TGG | - | chr4.4:30688767-30688786 | None:intergenic | 35.0% |
| !! | AGTTCTGAAATTGGAGAACT+AGG | - | chr4.4:30688455-30688474 | None:intergenic | 35.0% |
| AAAGAACCAAACGCATGCTT+TGG | - | chr4.4:30687430-30687449 | None:intergenic | 40.0% | |
| AAAGAGTTTGATGAGGGTGA+TGG | + | chr4.4:30687643-30687662 | MS.gene56537:CDS | 40.0% | |
| AAGAGTTTGATGAGGGTGAT+GGG | + | chr4.4:30687644-30687663 | MS.gene56537:CDS | 40.0% | |
| ACACTATGTATATGTGGCAG+AGG | + | chr4.4:30687613-30687632 | MS.gene56537:intron | 40.0% | |
| ACCTGTTCTGACAACAAACA+AGG | + | chr4.4:30687852-30687871 | MS.gene56537:CDS | 40.0% | |
| AGGACTAATGCAAATGATGG+AGG | + | chr4.4:30688686-30688705 | MS.gene56537:CDS | 40.0% | |
| AGTGTTCTCAGCCTCATTTA+TGG | - | chr4.4:30688600-30688619 | None:intergenic | 40.0% | |
| AGTTCTTCTTCTTCGACAAC+GGG | + | chr4.4:30688371-30688390 | MS.gene56537:CDS | 40.0% | |
| ATCACCCTCATCAAACTCTT+TGG | - | chr4.4:30687644-30687663 | None:intergenic | 40.0% | |
| CAACACCAAAGAGTTTGATG+AGG | + | chr4.4:30687636-30687655 | MS.gene56537:CDS | 40.0% | |
| GATGCAATTAATCAGCTTGG+AGG | + | chr4.4:30687506-30687525 | MS.gene56537:CDS | 40.0% | |
| GGTGAGAGGAAACAAAATAG+AGG | + | chr4.4:30688506-30688525 | MS.gene56537:CDS | 40.0% | |
| TAGAAGCTTGAAGATTGCTG+AGG | + | chr4.4:30688117-30688136 | MS.gene56537:intron | 40.0% | |
| TCATGAGTCCATTTCAACCT+AGG | - | chr4.4:30687467-30687486 | None:intergenic | 40.0% | |
| TGAGGCTCTTGAAGTACAAA+TGG | + | chr4.4:30688135-30688154 | MS.gene56537:CDS | 40.0% | |
| TGCAGTAGAGAAATCAGTGT+TGG | + | chr4.4:30687987-30688006 | MS.gene56537:CDS | 40.0% | |
| TTCAGTTGAATTGCCCCTAA+TGG | + | chr4.4:30688637-30688656 | MS.gene56537:CDS | 40.0% | |
| TTCTGACAACAAAAGCCAAC+AGG | + | chr4.4:30687824-30687843 | MS.gene56537:intron | 40.0% | |
| ! | AATGCAAATGATGGAGGAAG+TGG | + | chr4.4:30688692-30688711 | MS.gene56537:CDS | 40.0% |
| ! | AGATGTGTTGATCAACCAGA+TGG | + | chr4.4:30688749-30688768 | MS.gene56537:CDS | 40.0% |
| ! | ATGCAAATGATGGAGGAAGT+GGG | + | chr4.4:30688693-30688712 | MS.gene56537:CDS | 40.0% |
| ! | ATGCTAAGCCTAGGTTGAAA+TGG | + | chr4.4:30687456-30687475 | MS.gene56537:CDS | 40.0% |
| !! | ACCTTGTTTGTTGTCAGAAC+AGG | - | chr4.4:30687856-30687875 | None:intergenic | 40.0% |
| !! | ATTACTCAGTGGTTTGGTTC+TGG | - | chr4.4:30688016-30688035 | None:intergenic | 40.0% |
| !! | TTGGCTTTTGTTGTCAGAAC+AGG | - | chr4.4:30687823-30687842 | None:intergenic | 40.0% |
| AGATGGTACAAAGTGAGTCC+TGG | - | chr4.4:30687674-30687693 | None:intergenic | 45.0% | |
| CAGAACAGGTTTCTACCTGT+TGG | - | chr4.4:30687809-30687828 | None:intergenic | 45.0% | |
| GCAAAACCAAAGCATGCGTT+TGG | + | chr4.4:30687421-30687440 | MS.gene56537:CDS | 45.0% | |
| TAGACTTGGCAAAAGCCAAC+AGG | + | chr4.4:30687791-30687810 | MS.gene56537:CDS | 45.0% | |
| TGAAAGCTCCGAGAGAAAAG+AGG | + | chr4.4:30688565-30688584 | MS.gene56537:CDS | 45.0% | |
| TTTCCACTGATGCTAAGCCT+AGG | + | chr4.4:30687447-30687466 | MS.gene56537:CDS | 45.0% | |
| !! | TTCTGGCTCAATGGCCATTA+GGG | - | chr4.4:30688654-30688673 | None:intergenic | 45.0% |
| AGCCAGAAGGAAGGTCATTC+AGG | + | chr4.4:30688666-30688685 | MS.gene56537:CDS | 50.0% | |
| CAACCTAGGCTTAGCATCAG+TGG | - | chr4.4:30687453-30687472 | None:intergenic | 50.0% | |
| CTAATGGCCATTGAGCCAGA+AGG | + | chr4.4:30688653-30688672 | MS.gene56537:CDS | 50.0% | |
| GTCCTGAATGACCTTCCTTC+TGG | - | chr4.4:30688671-30688690 | None:intergenic | 50.0% | |
| ! | ATCGGTACTAATGAAGGCGC+AGG | + | chr4.4:30688331-30688350 | MS.gene56537:CDS | 50.0% |
| ! | TCTGGCTCAATGGCCATTAG+GGG | - | chr4.4:30688653-30688672 | None:intergenic | 50.0% |
| !! | ATGAGGGTGATGGGAATTCC+AGG | + | chr4.4:30687653-30687672 | MS.gene56537:CDS | 50.0% |
| !! | CTTCTGGCTCAATGGCCATT+AGG | - | chr4.4:30688655-30688674 | None:intergenic | 50.0% |
| !! | TGACCTTCCTTCTGGCTCAA+TGG | - | chr4.4:30688663-30688682 | None:intergenic | 50.0% |
| TGGCCATTGAGCCAGAAGGA+AGG | + | chr4.4:30688657-30688676 | MS.gene56537:CDS | 55.0% | |
| !! | AAGGCGCAGGAAGCACTTGC+AGG | + | chr4.4:30688344-30688363 | MS.gene56537:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 30687413 | 30688898 | 30687413 | ID=MS.gene56537 |
| chr4.4 | mRNA | 30687413 | 30688898 | 30687413 | ID=MS.gene56537.t1;Parent=MS.gene56537 |
| chr4.4 | exon | 30687413 | 30687536 | 30687413 | ID=MS.gene56537.t1.exon1;Parent=MS.gene56537.t1 |
| chr4.4 | CDS | 30687413 | 30687536 | 30687413 | ID=cds.MS.gene56537.t1;Parent=MS.gene56537.t1 |
| chr4.4 | exon | 30687633 | 30687709 | 30687633 | ID=MS.gene56537.t1.exon2;Parent=MS.gene56537.t1 |
| chr4.4 | CDS | 30687633 | 30687709 | 30687633 | ID=cds.MS.gene56537.t1;Parent=MS.gene56537.t1 |
| chr4.4 | exon | 30687786 | 30687812 | 30687786 | ID=MS.gene56537.t1.exon3;Parent=MS.gene56537.t1 |
| chr4.4 | CDS | 30687786 | 30687812 | 30687786 | ID=cds.MS.gene56537.t1;Parent=MS.gene56537.t1 |
| chr4.4 | exon | 30687846 | 30687873 | 30687846 | ID=MS.gene56537.t1.exon4;Parent=MS.gene56537.t1 |
| chr4.4 | CDS | 30687846 | 30687873 | 30687846 | ID=cds.MS.gene56537.t1;Parent=MS.gene56537.t1 |
| chr4.4 | exon | 30687955 | 30688030 | 30687955 | ID=MS.gene56537.t1.exon5;Parent=MS.gene56537.t1 |
| chr4.4 | CDS | 30687955 | 30688030 | 30687955 | ID=cds.MS.gene56537.t1;Parent=MS.gene56537.t1 |
| chr4.4 | exon | 30688120 | 30688189 | 30688120 | ID=MS.gene56537.t1.exon6;Parent=MS.gene56537.t1 |
| chr4.4 | CDS | 30688120 | 30688189 | 30688120 | ID=cds.MS.gene56537.t1;Parent=MS.gene56537.t1 |
| chr4.4 | exon | 30688281 | 30688898 | 30688281 | ID=MS.gene56537.t1.exon7;Parent=MS.gene56537.t1 |
| chr4.4 | CDS | 30688281 | 30688898 | 30688281 | ID=cds.MS.gene56537.t1;Parent=MS.gene56537.t1 |
| Gene Sequence |
| Protein sequence |
