Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58309.t1 | XP_024629359.1 | 96.8 | 370 | 7 | 2 | 1 | 366 | 1 | 369 | 5.30E-189 | 670.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58309.t1 | O80842 | 79.2 | 365 | 73 | 2 | 3 | 365 | 2 | 365 | 3.3e-155 | 549.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58309.t1 | A0A396GFB4 | 96.8 | 370 | 7 | 2 | 1 | 366 | 1 | 369 | 3.8e-189 | 670.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene58309 | 0.828246 | 1.00E-54 | -1.69E-46 |
| MS.gene049171 | MS.gene58309 | 0.816104 | 6.57E-52 | -1.69E-46 |
| MS.gene049173 | MS.gene58309 | 0.802403 | 5.71E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene58309 | 0.864005 | 1.66E-64 | -1.69E-46 |
| MS.gene049222 | MS.gene58309 | 0.8492 | 3.77E-60 | -1.69E-46 |
| MS.gene049285 | MS.gene58309 | 0.853829 | 1.84E-61 | -1.69E-46 |
| MS.gene049320 | MS.gene58309 | 0.835944 | 1.25E-56 | -1.69E-46 |
| MS.gene049427 | MS.gene58309 | 0.865775 | 4.62E-65 | -1.69E-46 |
| MS.gene049609 | MS.gene58309 | 0.811649 | 6.30E-51 | -1.69E-46 |
| MS.gene049614 | MS.gene58309 | 0.80642 | 8.30E-50 | -1.69E-46 |
| MS.gene049615 | MS.gene58309 | 0.815673 | 8.19E-52 | -1.69E-46 |
| MS.gene049627 | MS.gene58309 | 0.816571 | 5.16E-52 | -1.69E-46 |
| MS.gene049805 | MS.gene58309 | 0.838259 | 3.20E-57 | -1.69E-46 |
| MS.gene050163 | MS.gene58309 | 0.868092 | 8.44E-66 | -1.69E-46 |
| MS.gene050165 | MS.gene58309 | 0.858029 | 1.09E-62 | -1.69E-46 |
| MS.gene050333 | MS.gene58309 | 0.878635 | 2.39E-69 | -1.69E-46 |
| MS.gene050444 | MS.gene58309 | 0.822469 | 2.33E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene58309 | 0.831466 | 1.64E-55 | -1.69E-46 |
| MS.gene050518 | MS.gene58309 | 0.851514 | 8.45E-61 | -1.69E-46 |
| MS.gene050538 | MS.gene58309 | 0.800272 | 1.56E-48 | -1.69E-46 |
| MS.gene050593 | MS.gene58309 | 0.818159 | 2.27E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene58309 | 0.826788 | 2.24E-54 | -1.69E-46 |
| MS.gene050675 | MS.gene58309 | 0.821389 | 4.14E-53 | -1.69E-46 |
| MS.gene050699 | MS.gene58309 | 0.837902 | 3.95E-57 | -1.69E-46 |
| MS.gene050747 | MS.gene58309 | 0.828152 | 1.05E-54 | -1.69E-46 |
| MS.gene050767 | MS.gene58309 | 0.854337 | 1.32E-61 | -1.69E-46 |
| MS.gene050770 | MS.gene58309 | 0.857422 | 1.65E-62 | -1.69E-46 |
| MS.gene050772 | MS.gene58309 | 0.83846 | 2.84E-57 | -1.69E-46 |
| MS.gene050812 | MS.gene58309 | 0.809335 | 1.99E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene58309 | 0.82352 | 1.33E-53 | -1.69E-46 |
| MS.gene05100 | MS.gene58309 | 0.838863 | 2.23E-57 | -1.69E-46 |
| MS.gene05101 | MS.gene58309 | 0.810797 | 9.64E-51 | -1.69E-46 |
| MS.gene051228 | MS.gene58309 | 0.839824 | 1.26E-57 | -1.69E-46 |
| MS.gene051387 | MS.gene58309 | 0.826276 | 2.96E-54 | -1.69E-46 |
| MS.gene051434 | MS.gene58309 | 0.80124 | 9.88E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene58309 | 0.855074 | 8.05E-62 | -1.69E-46 |
| MS.gene051694 | MS.gene58309 | 0.849024 | 4.22E-60 | -1.69E-46 |
| MS.gene051810 | MS.gene58309 | 0.817556 | 3.10E-52 | -1.69E-46 |
| MS.gene051858 | MS.gene58309 | 0.842165 | 3.05E-58 | -1.69E-46 |
| MS.gene051949 | MS.gene58309 | 0.829511 | 4.94E-55 | -1.69E-46 |
| MS.gene052271 | MS.gene58309 | 0.861277 | 1.15E-63 | -1.69E-46 |
| MS.gene052290 | MS.gene58309 | 0.813913 | 2.01E-51 | -1.69E-46 |
| MS.gene052379 | MS.gene58309 | 0.87426 | 7.76E-68 | -1.69E-46 |
| MS.gene052615 | MS.gene58309 | 0.806064 | 9.86E-50 | -1.69E-46 |
| MS.gene052870 | MS.gene58309 | 0.801995 | 6.92E-49 | -1.69E-46 |
| MS.gene052872 | MS.gene58309 | 0.812448 | 4.22E-51 | -1.69E-46 |
| MS.gene052916 | MS.gene58309 | 0.82402 | 1.01E-53 | -1.69E-46 |
| MS.gene053009 | MS.gene58309 | 0.813574 | 2.39E-51 | -1.69E-46 |
| MS.gene053104 | MS.gene58309 | 0.8079 | 4.03E-50 | -1.69E-46 |
| MS.gene053107 | MS.gene58309 | 0.823361 | 1.44E-53 | -1.69E-46 |
| MS.gene053207 | MS.gene58309 | 0.819463 | 1.15E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene58309 | 0.8525 | 4.43E-61 | -1.69E-46 |
| MS.gene053285 | MS.gene58309 | 0.803554 | 3.30E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene58309 | 0.843623 | 1.25E-58 | -1.69E-46 |
| MS.gene053322 | MS.gene58309 | 0.861977 | 7.02E-64 | -1.69E-46 |
| MS.gene053574 | MS.gene58309 | 0.808162 | 3.55E-50 | -1.69E-46 |
| MS.gene053579 | MS.gene58309 | 0.80825 | 3.40E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene58309 | 0.833306 | 5.75E-56 | -1.69E-46 |
| MS.gene053824 | MS.gene58309 | 0.800309 | 1.53E-48 | -1.69E-46 |
| MS.gene053916 | MS.gene58309 | 0.800516 | 1.39E-48 | -1.69E-46 |
| MS.gene054376 | MS.gene58309 | 0.83317 | 6.22E-56 | -1.69E-46 |
| MS.gene054595 | MS.gene58309 | 0.805541 | 1.27E-49 | -1.69E-46 |
| MS.gene054600 | MS.gene58309 | 0.830716 | 2.51E-55 | -1.69E-46 |
| MS.gene054642 | MS.gene58309 | 0.863546 | 2.30E-64 | -1.69E-46 |
| MS.gene054802 | MS.gene58309 | 0.872952 | 2.14E-67 | -1.69E-46 |
| MS.gene054803 | MS.gene58309 | 0.872631 | 2.74E-67 | -1.69E-46 |
| MS.gene054804 | MS.gene58309 | 0.873397 | 1.52E-67 | -1.69E-46 |
| MS.gene054954 | MS.gene58309 | 0.814624 | 1.40E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene58309 | 0.812573 | 3.96E-51 | -1.69E-46 |
| MS.gene055206 | MS.gene58309 | 0.819601 | 1.07E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene58309 | 0.825332 | 4.97E-54 | -1.69E-46 |
| MS.gene055397 | MS.gene58309 | 0.8778 | 4.70E-69 | -1.69E-46 |
| MS.gene055412 | MS.gene58309 | 0.811076 | 8.39E-51 | -1.69E-46 |
| MS.gene055499 | MS.gene58309 | 0.851713 | 7.42E-61 | -1.69E-46 |
| MS.gene055502 | MS.gene58309 | 0.847669 | 9.99E-60 | -1.69E-46 |
| MS.gene055577 | MS.gene58309 | 0.823045 | 1.71E-53 | -1.69E-46 |
| MS.gene055636 | MS.gene58309 | 0.847962 | 8.30E-60 | -1.69E-46 |
| MS.gene055638 | MS.gene58309 | 0.853038 | 3.11E-61 | -1.69E-46 |
| MS.gene055647 | MS.gene58309 | 0.869508 | 2.94E-66 | -1.69E-46 |
| MS.gene055722 | MS.gene58309 | 0.834186 | 3.47E-56 | -1.69E-46 |
| MS.gene05592 | MS.gene58309 | 0.831104 | 2.02E-55 | -1.69E-46 |
| MS.gene055941 | MS.gene58309 | 0.847073 | 1.46E-59 | -1.69E-46 |
| MS.gene056083 | MS.gene58309 | 0.817938 | 2.54E-52 | -1.69E-46 |
| MS.gene056374 | MS.gene58309 | 0.836185 | 1.09E-56 | -1.69E-46 |
| MS.gene056410 | MS.gene58309 | 0.804155 | 2.47E-49 | -1.69E-46 |
| MS.gene056449 | MS.gene58309 | 0.804826 | 1.79E-49 | -1.69E-46 |
| MS.gene056510 | MS.gene58309 | 0.805898 | 1.07E-49 | -1.69E-46 |
| MS.gene056549 | MS.gene58309 | 0.868749 | 5.18E-66 | -1.69E-46 |
| MS.gene056609 | MS.gene58309 | 0.808969 | 2.38E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene58309 | 0.855745 | 5.13E-62 | -1.69E-46 |
| MS.gene056692 | MS.gene58309 | 0.818316 | 2.09E-52 | -1.69E-46 |
| MS.gene056897 | MS.gene58309 | 0.808066 | 3.72E-50 | -1.69E-46 |
| MS.gene056903 | MS.gene58309 | 0.810746 | 9.89E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene58309 | 0.84504 | 5.20E-59 | -1.69E-46 |
| MS.gene057129 | MS.gene58309 | 0.875966 | 2.03E-68 | -1.69E-46 |
| MS.gene057146 | MS.gene58309 | 0.836897 | 7.15E-57 | -1.69E-46 |
| MS.gene057246 | MS.gene58309 | 0.801662 | 8.10E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene58309 | 0.818811 | 1.61E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene58309 | 0.854566 | 1.13E-61 | -1.69E-46 |
| MS.gene057831 | MS.gene58309 | 0.83291 | 7.22E-56 | -1.69E-46 |
| MS.gene057926 | MS.gene58309 | 0.819375 | 1.20E-52 | -1.69E-46 |
| MS.gene058019 | MS.gene58309 | 0.850037 | 2.20E-60 | -1.69E-46 |
| MS.gene058293 | MS.gene58309 | 0.828398 | 9.19E-55 | -1.69E-46 |
| MS.gene058323 | MS.gene58309 | 0.8342 | 3.44E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene58309 | 0.851106 | 1.10E-60 | -1.69E-46 |
| MS.gene058544 | MS.gene58309 | 0.821089 | 4.86E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene58309 | 0.835942 | 1.25E-56 | -1.69E-46 |
| MS.gene058723 | MS.gene58309 | 0.808289 | 3.33E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene58309 | 0.839494 | 1.53E-57 | -1.69E-46 |
| MS.gene05883 | MS.gene58309 | 0.824589 | 7.44E-54 | -1.69E-46 |
| MS.gene058993 | MS.gene58309 | 0.806646 | 7.44E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene58309 | 0.816815 | 4.55E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene58309 | 0.824056 | 9.93E-54 | -1.69E-46 |
| MS.gene059029 | MS.gene58309 | 0.83671 | 7.98E-57 | -1.69E-46 |
| MS.gene059079 | MS.gene58309 | 0.824287 | 8.76E-54 | -1.69E-46 |
| MS.gene05934 | MS.gene58309 | 0.860263 | 2.33E-63 | -1.69E-46 |
| MS.gene059536 | MS.gene58309 | 0.852774 | 3.70E-61 | -1.69E-46 |
| MS.gene05959 | MS.gene58309 | 0.808763 | 2.64E-50 | -1.69E-46 |
| MS.gene059676 | MS.gene58309 | 0.823629 | 1.25E-53 | -1.69E-46 |
| MS.gene059677 | MS.gene58309 | 0.843451 | 1.39E-58 | -1.69E-46 |
| MS.gene059718 | MS.gene58309 | 0.841642 | 4.20E-58 | -1.69E-46 |
| MS.gene059756 | MS.gene58309 | 0.831552 | 1.56E-55 | -1.69E-46 |
| MS.gene059801 | MS.gene58309 | 0.828791 | 7.39E-55 | -1.69E-46 |
| MS.gene059858 | MS.gene58309 | 0.818124 | 2.31E-52 | -1.69E-46 |
| MS.gene059902 | MS.gene58309 | 0.83313 | 6.37E-56 | -1.69E-46 |
| MS.gene059960 | MS.gene58309 | 0.906028 | 2.30E-80 | -1.69E-46 |
| MS.gene060193 | MS.gene58309 | 0.852549 | 4.29E-61 | -1.69E-46 |
| MS.gene060762 | MS.gene58309 | 0.824704 | 6.99E-54 | -1.69E-46 |
| MS.gene06077 | MS.gene58309 | 0.801765 | 7.71E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene58309 | 0.829738 | 4.35E-55 | -1.69E-46 |
| MS.gene060818 | MS.gene58309 | 0.836391 | 9.62E-57 | -1.69E-46 |
| MS.gene06092 | MS.gene58309 | 0.842017 | 3.34E-58 | -1.69E-46 |
| MS.gene061041 | MS.gene58309 | 0.816302 | 5.93E-52 | -1.69E-46 |
| MS.gene061134 | MS.gene58309 | 0.816773 | 4.65E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene58309 | 0.865058 | 7.78E-65 | -1.69E-46 |
| MS.gene061171 | MS.gene58309 | 0.807862 | 4.11E-50 | -1.69E-46 |
| MS.gene061200 | MS.gene58309 | 0.909557 | 4.99E-82 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58309.t1 | MTR_8g032340 | 92.021 | 376 | 15 | 5 | 1 | 366 | 1 | 371 | 0.0 | 665 |
| MS.gene58309.t1 | MTR_8g032480 | 88.827 | 179 | 10 | 3 | 194 | 366 | 22 | 196 | 2.76e-104 | 305 |
| MS.gene58309.t1 | MTR_7g104890 | 33.444 | 302 | 188 | 5 | 66 | 365 | 70 | 360 | 1.33e-38 | 145 |
| MS.gene58309.t1 | MTR_7g104890 | 38.318 | 214 | 125 | 2 | 152 | 365 | 21 | 227 | 2.70e-37 | 139 |
| MS.gene58309.t1 | MTR_2g104050 | 32.082 | 293 | 181 | 6 | 76 | 365 | 18 | 295 | 9.37e-34 | 130 |
| MS.gene58309.t1 | MTR_4g010050 | 30.508 | 295 | 189 | 4 | 73 | 365 | 15 | 295 | 3.14e-33 | 129 |
| MS.gene58309.t1 | MTR_4g130770 | 29.730 | 296 | 179 | 7 | 91 | 365 | 343 | 630 | 7.67e-21 | 94.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58309.t1 | AT2G45770 | 78.904 | 365 | 74 | 2 | 3 | 365 | 2 | 365 | 0.0 | 575 |
| MS.gene58309.t1 | AT5G03940 | 35.664 | 286 | 172 | 4 | 82 | 365 | 95 | 370 | 2.16e-41 | 153 |
| MS.gene58309.t1 | AT1G15310 | 32.653 | 294 | 178 | 6 | 76 | 365 | 18 | 295 | 2.28e-35 | 135 |
| MS.gene58309.t1 | AT1G48900 | 30.450 | 289 | 185 | 5 | 76 | 362 | 18 | 292 | 6.35e-32 | 125 |
| MS.gene58309.t1 | AT1G48900 | 30.137 | 292 | 188 | 5 | 76 | 365 | 18 | 295 | 4.10e-31 | 123 |
| MS.gene58309.t1 | AT5G49500 | 29.508 | 305 | 194 | 7 | 66 | 365 | 9 | 297 | 5.01e-28 | 115 |
| MS.gene58309.t1 | AT5G49500 | 34.637 | 179 | 108 | 3 | 188 | 365 | 5 | 175 | 1.19e-22 | 98.2 |
| MS.gene58309.t1 | AT4G30600 | 30.667 | 300 | 177 | 8 | 89 | 365 | 342 | 633 | 2.40e-21 | 95.9 |
| MS.gene58309.t1 | AT4G30600 | 30.667 | 300 | 177 | 8 | 89 | 365 | 342 | 633 | 2.40e-21 | 95.9 |
Find 88 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTTATTAGTTTCTGATTT+TGG | 0.146686 | 8.2:+65573258 | MS.gene58309:CDS |
| TTGATGAGCTTCTTCTTTAT+TGG | 0.152429 | 8.2:+65573103 | MS.gene58309:CDS |
| TTAAGAGAGGATATTCTTTC+TGG | 0.176661 | 8.2:+65573312 | MS.gene58309:CDS |
| CTCTTCCATTAGCCTGTAAT+TGG | 0.202802 | 8.2:-65579638 | None:intergenic |
| GGAGAGATTGTTACGAGTTT+TGG | 0.248300 | 8.2:-65573076 | None:intergenic |
| GGACAGGTTGTGGGTGTAAC+TGG | 0.259487 | 8.2:+65581383 | MS.gene58309:intron |
| GCAGGAGATCTTACTGGTTC+TGG | 0.276643 | 8.2:+65580794 | MS.gene58309:intron |
| AAGATGAGGAATTGTTGTTT+TGG | 0.277308 | 8.2:-65572907 | None:intergenic |
| AGAGTTAATTTCTTGTAAAA+AGG | 0.283124 | 8.2:+65579657 | MS.gene58309:CDS |
| CAGGTTTACACACCAATTAC+AGG | 0.291032 | 8.2:+65579626 | MS.gene58309:intron |
| AGCACTGAAGAAGAATGTTT+TGG | 0.320378 | 8.2:+65575313 | MS.gene58309:CDS |
| ATTTGTACCTGCTGATGCTT+TGG | 0.322384 | 8.2:-65579307 | None:intergenic |
| CTAGTGATCAGCTAGAAATA+TGG | 0.333355 | 8.2:+65579238 | MS.gene58309:CDS |
| TGGCGGGAAGACAACATCTT+TGG | 0.352330 | 8.2:+65575524 | MS.gene58309:CDS |
| CTTTCTGGGAAGCTTAAATC+AGG | 0.352858 | 8.2:+65573327 | MS.gene58309:CDS |
| CTGAACTTCAACTTGGATAT+AGG | 0.353693 | 8.2:+65575363 | MS.gene58309:CDS |
| AACACCAACTATCATTATTA+CGG | 0.358526 | 8.2:-65575496 | None:intergenic |
| ATGCTTGCAGGAGATCTTAC+TGG | 0.362667 | 8.2:+65580788 | MS.gene58309:intron |
| ATAATGATAGTTGGTGTTAA+TGG | 0.374585 | 8.2:+65575501 | MS.gene58309:CDS |
| TGCTCCGCCGCCGGTGAAAC+CGG | 0.375150 | 8.2:+65572979 | MS.gene58309:CDS |
| CTGGTTCTGGATGGAACTAC+TGG | 0.380978 | 8.2:+65580807 | MS.gene58309:CDS |
| ATTTACTTCATTGAATTCTC+TGG | 0.387565 | 8.2:-65580850 | None:intergenic |
| TAAATCAGGGAGTGAAATAA+AGG | 0.401594 | 8.2:+65573341 | MS.gene58309:CDS |
| GAAATATGGGCTGAAAGGAC+TGG | 0.422519 | 8.2:+65579252 | MS.gene58309:CDS |
| TTTGTCTTGGGACAGGTTGT+GGG | 0.424495 | 8.2:+65581374 | MS.gene58309:intron |
| ACACACCAATTACAGGCTAA+TGG | 0.426484 | 8.2:+65579633 | MS.gene58309:CDS |
| CGGCGGCGGAGCATGTGAAC+CGG | 0.436167 | 8.2:-65572969 | None:intergenic |
| GGCGGGAAGACAACATCTTT+GGG | 0.437333 | 8.2:+65575525 | MS.gene58309:CDS |
| CCTCTGCATCGAAGGGTTGA+AGG | 0.441432 | 8.2:-65581649 | None:intergenic |
| CCTGTAAAATTTGTTGGTGT+TGG | 0.450968 | 8.2:+65581611 | MS.gene58309:CDS |
| TAAGAGAGGATATTCTTTCT+GGG | 0.459006 | 8.2:+65573313 | MS.gene58309:CDS |
| GGAATCCCTGTAAAATTTGT+TGG | 0.460807 | 8.2:+65581605 | MS.gene58309:CDS |
| AAAATTCTACCAGATATTGT+TGG | 0.466991 | 8.2:+65579188 | MS.gene58309:intron |
| GTGAACCGGGTTCGAGATGA+GGG | 0.467454 | 8.2:-65572955 | None:intergenic |
| GATGTAGAGAAACTCTTCTC+TGG | 0.470900 | 8.2:+65573048 | MS.gene58309:CDS |
| GGGTTTAGTTTGAAATGGGG+AGG | 0.482091 | 8.2:-65572932 | None:intergenic |
| GGTCAGTGTGGTTGATGAGC+TGG | 0.490176 | 8.2:+65581583 | MS.gene58309:intron |
| GCTGTTGCTAAAGTAGTTGC+TGG | 0.491147 | 8.2:+65579679 | MS.gene58309:CDS |
| AGCTAGAAATATGGGCTGAA+AGG | 0.492518 | 8.2:+65579247 | MS.gene58309:CDS |
| CCAACTATCATTATTACGGC+TGG | 0.492849 | 8.2:-65575492 | None:intergenic |
| GAAAATTACTATTAAGATTG+TGG | 0.493629 | 8.2:+65573284 | MS.gene58309:CDS |
| GACAAAGGCCTCTGCATCGA+AGG | 0.495480 | 8.2:-65581657 | None:intergenic |
| TAGTGATCAGCTAGAAATAT+GGG | 0.501137 | 8.2:+65579239 | MS.gene58309:CDS |
| ATTGTATTATGTGATACATC+TGG | 0.501382 | 8.2:+65579515 | MS.gene58309:CDS |
| TGTGAATAGACCGGTTTCAC+CGG | 0.505046 | 8.2:-65572989 | None:intergenic |
| TACCAGATATTGTTGGCAGC+TGG | 0.506306 | 8.2:+65579195 | MS.gene58309:intron |
| CGGTTCACATGCTCCGCCGC+CGG | 0.521204 | 8.2:+65572970 | MS.gene58309:CDS |
| AAATATGGGCTGAAAGGACT+GGG | 0.523298 | 8.2:+65579253 | MS.gene58309:CDS |
| GATTGTGGAGAATTTAAGAG+AGG | 0.533147 | 8.2:+65573299 | MS.gene58309:CDS |
| CTGGCTTATAGATTGAAGAA+TGG | 0.541325 | 8.2:+65575810 | MS.gene58309:CDS |
| ATTGAAGAATGGAGGTGCTA+AGG | 0.542507 | 8.2:+65575821 | MS.gene58309:CDS |
| ATAGTTGGTGTTAATGGTGG+CGG | 0.543515 | 8.2:+65575507 | MS.gene58309:CDS |
| TCATTGAATTCTCTGGCTTG+TGG | 0.544319 | 8.2:-65580843 | None:intergenic |
| GAGAAATCCAAAGCATCAGC+AGG | 0.562472 | 8.2:+65579300 | MS.gene58309:CDS |
| AGTAAAACTGAACTTCAACT+TGG | 0.564527 | 8.2:+65575356 | MS.gene58309:CDS |
| AAATTTGTTGGTGTTGGTGA+AGG | 0.564716 | 8.2:+65581617 | MS.gene58309:CDS |
| GTCAGTGTGGTTGATGAGCT+GGG | 0.566152 | 8.2:+65581584 | MS.gene58309:CDS |
| TGTGAACCGGGTTCGAGATG+AGG | 0.574121 | 8.2:-65572956 | None:intergenic |
| TTTGGATTTGTTAAGCAACA+AGG | 0.578155 | 8.2:+65575331 | MS.gene58309:CDS |
| AAGCTGGATGGTTCTGCAAG+AGG | 0.579304 | 8.2:+65581419 | MS.gene58309:CDS |
| GGCGGCGGAGCATGTGAACC+GGG | 0.581453 | 8.2:-65572968 | None:intergenic |
| CCAGCCGTAATAATGATAGT+TGG | 0.582690 | 8.2:+65575492 | MS.gene58309:CDS |
| TCTTGCAGAACCATCCAGCT+TGG | 0.585467 | 8.2:-65581417 | None:intergenic |
| GTCTATTCACAAAACTCGGC+CGG | 0.585521 | 8.2:+65573001 | MS.gene58309:CDS |
| AAGAAGAAGCTCATCAATGA+CGG | 0.586886 | 8.2:-65573097 | None:intergenic |
| CCTTCAACCCTTCGATGCAG+AGG | 0.587775 | 8.2:+65581649 | MS.gene58309:CDS |
| TTGGATTTGTTAAGCAACAA+GGG | 0.588870 | 8.2:+65575332 | MS.gene58309:CDS |
| GAAATGGGGAGGTGAAGATG+AGG | 0.589668 | 8.2:-65572921 | None:intergenic |
| GAACCGGGTTCGAGATGAGG+GGG | 0.589872 | 8.2:-65572953 | None:intergenic |
| GAATAGACCGGTTTCACCGG+CGG | 0.591255 | 8.2:-65572986 | None:intergenic |
| GAGATCTTACTGGTTCTGGA+TGG | 0.592324 | 8.2:+65580798 | MS.gene58309:CDS |
| TTTCTGGGAAGCTTAAATCA+GGG | 0.595703 | 8.2:+65573328 | MS.gene58309:CDS |
| ACCGGTCTATTCACAAAACT+CGG | 0.597138 | 8.2:+65572997 | MS.gene58309:CDS |
| AGTTCTTGATGAACTCGAAG+AGG | 0.599876 | 8.2:+65573146 | MS.gene58309:CDS |
| TAGACCGGTTTCACCGGCGG+CGG | 0.602288 | 8.2:-65572983 | None:intergenic |
| TAGTTGGTGTTAATGGTGGC+GGG | 0.606074 | 8.2:+65575508 | MS.gene58309:CDS |
| GACTGGGTCTGAGATTGTTG+TGG | 0.612331 | 8.2:+65579269 | MS.gene58309:CDS |
| TGGATTTGTTAAGCAACAAG+GGG | 0.614912 | 8.2:+65575333 | MS.gene58309:CDS |
| GAGGCGGGTGAATGAAGCAG+AGG | 0.615384 | 8.2:-65572875 | None:intergenic |
| ACAAAGGCCTCTGCATCGAA+GGG | 0.616242 | 8.2:-65581656 | None:intergenic |
| AACCGGGTTCGAGATGAGGG+GGG | 0.622086 | 8.2:-65572952 | None:intergenic |
| TGAACCGGGTTCGAGATGAG+GGG | 0.627367 | 8.2:-65572954 | None:intergenic |
| CTGGATGGTTCTGCAAGAGG+TGG | 0.633895 | 8.2:+65581422 | MS.gene58309:CDS |
| ATGATAGTTGGTGTTAATGG+TGG | 0.644334 | 8.2:+65575504 | MS.gene58309:CDS |
| TATTTCTAGCTGATCACTAG+CGG | 0.649322 | 8.2:-65579235 | None:intergenic |
| GCTTATAGATTGAAGAATGG+AGG | 0.650080 | 8.2:+65575813 | MS.gene58309:CDS |
| TTCTGCAAGAGGTGGCTGTG+TGG | 0.671813 | 8.2:+65581430 | MS.gene58309:CDS |
| TTACTGTTGGCAGGTCAGTG+TGG | 0.716550 | 8.2:+65581571 | MS.gene58309:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 65572862 | 65581697 | 65572862 | ID=MS.gene58309 |
| chr8.2 | mRNA | 65572862 | 65581697 | 65572862 | ID=MS.gene58309.t1;Parent=MS.gene58309 |
| chr8.2 | exon | 65572862 | 65573167 | 65572862 | ID=MS.gene58309.t1.exon1;Parent=MS.gene58309.t1 |
| chr8.2 | CDS | 65572862 | 65573167 | 65572862 | ID=cds.MS.gene58309.t1;Parent=MS.gene58309.t1 |
| chr8.2 | exon | 65573258 | 65573362 | 65573258 | ID=MS.gene58309.t1.exon2;Parent=MS.gene58309.t1 |
| chr8.2 | CDS | 65573258 | 65573362 | 65573258 | ID=cds.MS.gene58309.t1;Parent=MS.gene58309.t1 |
| chr8.2 | exon | 65575311 | 65575384 | 65575311 | ID=MS.gene58309.t1.exon3;Parent=MS.gene58309.t1 |
| chr8.2 | CDS | 65575311 | 65575384 | 65575311 | ID=cds.MS.gene58309.t1;Parent=MS.gene58309.t1 |
| chr8.2 | exon | 65575488 | 65575546 | 65575488 | ID=MS.gene58309.t1.exon4;Parent=MS.gene58309.t1 |
| chr8.2 | CDS | 65575488 | 65575546 | 65575488 | ID=cds.MS.gene58309.t1;Parent=MS.gene58309.t1 |
| chr8.2 | exon | 65575805 | 65575842 | 65575805 | ID=MS.gene58309.t1.exon5;Parent=MS.gene58309.t1 |
| chr8.2 | CDS | 65575805 | 65575842 | 65575805 | ID=cds.MS.gene58309.t1;Parent=MS.gene58309.t1 |
| chr8.2 | exon | 65579201 | 65579321 | 65579201 | ID=MS.gene58309.t1.exon6;Parent=MS.gene58309.t1 |
| chr8.2 | CDS | 65579201 | 65579321 | 65579201 | ID=cds.MS.gene58309.t1;Parent=MS.gene58309.t1 |
| chr8.2 | exon | 65579471 | 65579539 | 65579471 | ID=MS.gene58309.t1.exon7;Parent=MS.gene58309.t1 |
| chr8.2 | CDS | 65579471 | 65579539 | 65579471 | ID=cds.MS.gene58309.t1;Parent=MS.gene58309.t1 |
| chr8.2 | exon | 65579629 | 65579711 | 65579629 | ID=MS.gene58309.t1.exon8;Parent=MS.gene58309.t1 |
| chr8.2 | CDS | 65579629 | 65579711 | 65579629 | ID=cds.MS.gene58309.t1;Parent=MS.gene58309.t1 |
| chr8.2 | exon | 65580798 | 65580866 | 65580798 | ID=MS.gene58309.t1.exon9;Parent=MS.gene58309.t1 |
| chr8.2 | CDS | 65580798 | 65580866 | 65580798 | ID=cds.MS.gene58309.t1;Parent=MS.gene58309.t1 |
| chr8.2 | exon | 65581389 | 65581451 | 65581389 | ID=MS.gene58309.t1.exon10;Parent=MS.gene58309.t1 |
| chr8.2 | CDS | 65581389 | 65581451 | 65581389 | ID=cds.MS.gene58309.t1;Parent=MS.gene58309.t1 |
| chr8.2 | exon | 65581584 | 65581697 | 65581584 | ID=MS.gene58309.t1.exon11;Parent=MS.gene58309.t1 |
| chr8.2 | CDS | 65581584 | 65581697 | 65581584 | ID=cds.MS.gene58309.t1;Parent=MS.gene58309.t1 |
| Gene Sequence |
| Protein sequence |
