AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014433.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014433.01.T01 MTR_3g056675 76.298 578 45 7 1 519 709 1253 0.0 853
MsG0380014433.01.T01 MTR_3g056645 75.737 577 48 7 1 518 137 680 0.0 847
MsG0380014433.01.T01 MTR_3g056700 71.577 577 74 6 1 519 762 1306 0.0 794
MsG0380014433.01.T01 MTR_3g056700 24.731 186 126 3 268 452 458 630 1.90e-12 70.5
MsG0380014433.01.T01 MTR_5g094830 60.938 576 134 8 1 517 952 1495 0.0 667
MsG0380014433.01.T01 MTR_5g094830 20.565 248 179 4 207 452 599 830 6.06e-11 65.9
MsG0380014433.01.T01 MTR_3g056705 72.515 342 62 1 176 517 1243 1552 2.06e-168 516
MsG0380014433.01.T01 MTR_3g056705 61.481 135 52 0 1 135 1010 1144 3.91e-45 171
MsG0380014433.01.T01 MTR_5g033320 72.965 344 60 2 175 517 1169 1480 5.33e-167 511
MsG0380014433.01.T01 MTR_5g033320 56.296 135 58 1 1 135 938 1071 4.06e-39 153
MsG0380014433.01.T01 MTR_5g033320 24.194 186 127 2 268 452 638 810 4.00e-11 66.6
MsG0380014433.01.T01 MTR_5g033030 73.099 342 59 2 175 515 1179 1488 1.10e-166 510
MsG0380014433.01.T01 MTR_5g033030 63.704 135 49 0 1 135 947 1081 1.07e-46 175
MsG0380014433.01.T01 MTR_5g094810 73.494 332 55 2 175 505 1169 1468 4.05e-162 498
MsG0380014433.01.T01 MTR_5g094810 60.741 135 53 0 1 135 937 1071 2.15e-43 166
MsG0380014433.01.T01 MTR_0874s0020 57.771 341 112 1 175 515 54 362 1.82e-138 405
MsG0380014433.01.T01 MTR_8g015970 42.266 556 228 7 13 509 758 1279 1.10e-137 429
MsG0380014433.01.T01 MTR_8g015970 42.266 556 228 7 13 509 754 1275 1.36e-137 429
MsG0380014433.01.T01 MTR_8g040170 41.982 555 231 6 13 509 743 1264 8.59e-135 422
MsG0380014433.01.T01 MTR_8g015970 44.177 498 218 5 13 451 754 1250 1.72e-133 418
MsG0380014433.01.T01 MTR_8g015970 44.177 498 218 5 13 451 758 1254 3.10e-133 417
MsG0380014433.01.T01 MTR_8g040170 41.385 563 231 7 13 509 583 1112 4.33e-133 414
MsG0380014433.01.T01 MTR_8g009640 57.478 341 113 1 175 515 529 837 2.44e-132 405
MsG0380014433.01.T01 MTR_8g015980 41.652 557 230 8 13 509 919 1440 6.83e-132 417
MsG0380014433.01.T01 MTR_6g034220 42.246 561 224 6 12 509 941 1464 4.12e-130 412
MsG0380014433.01.T01 MTR_6g034220 26.840 231 145 5 258 483 638 849 1.26e-12 71.2
MsG0380014433.01.T01 MTR_5g094820 72.426 272 49 2 246 517 894 1139 4.44e-129 404
MsG0380014433.01.T01 MTR_1g069450 56.510 361 118 3 160 514 1198 1525 1.37e-128 409
MsG0380014433.01.T01 MTR_1g069450 41.176 187 97 3 1 187 986 1159 1.74e-31 130
MsG0380014433.01.T01 MTR_7g098690 55.956 361 120 3 160 514 1182 1509 3.91e-127 405
MsG0380014433.01.T01 MTR_7g098690 43.704 135 76 0 1 135 970 1104 5.36e-29 122
MsG0380014433.01.T01 MTR_0019s0020 41.696 566 228 11 8 509 888 1415 1.13e-124 397
MsG0380014433.01.T01 MTR_0019s0020 25.941 239 158 5 221 454 549 773 3.56e-13 73.2
MsG0380014433.01.T01 MTR_6g084320 41.607 560 238 9 1 509 891 1412 3.42e-123 393
MsG0380014433.01.T01 MTR_8g080050 55.000 340 121 1 175 514 1132 1439 4.29e-122 390
MsG0380014433.01.T01 MTR_8g080050 43.452 168 80 4 15 181 914 1067 1.37e-26 115
MsG0380014433.01.T01 MTR_8g080050 26.738 187 122 5 268 452 615 788 1.63e-11 67.8
MsG0380014433.01.T01 MTR_0019s0020 44.094 508 214 10 8 451 888 1389 1.96e-121 388
MsG0380014433.01.T01 MTR_0019s0020 25.296 253 166 6 207 454 539 773 2.86e-13 73.2
MsG0380014433.01.T01 MTR_8g016010 40.828 507 250 6 13 509 285 751 1.69e-118 367
MsG0380014433.01.T01 MTR_8g042520 51.497 334 130 1 176 509 358 659 1.24e-112 348
MsG0380014433.01.T01 MTR_8g042520 37.063 143 82 3 13 150 137 276 2.86e-17 85.5
MsG0380014433.01.T01 MTR_1g099280 51.917 339 121 3 176 509 1165 1466 2.85e-112 363
MsG0380014433.01.T01 MTR_1g099280 37.815 119 68 2 13 128 944 1059 2.34e-16 83.2
MsG0380014433.01.T01 MTR_1g099280 26.699 206 137 2 258 462 637 829 1.03e-12 71.6
MsG0380014433.01.T01 MTR_1g099280 51.917 339 121 3 176 509 1190 1491 4.21e-112 363
MsG0380014433.01.T01 MTR_1g099280 37.815 119 68 2 13 128 969 1084 2.37e-16 83.2
MsG0380014433.01.T01 MTR_1g099280 26.699 206 137 2 258 462 662 854 1.24e-12 71.2
MsG0380014433.01.T01 MTR_8g040620 51.045 335 131 2 175 509 1145 1446 6.05e-111 360
MsG0380014433.01.T01 MTR_8g040620 42.276 123 71 0 13 135 925 1047 1.87e-20 95.9
MsG0380014433.01.T01 MTR_6g034755 52.695 334 125 2 176 509 1172 1472 1.10e-110 359
MsG0380014433.01.T01 MTR_6g034755 40.323 124 72 2 13 135 951 1073 4.52e-18 88.6
MsG0380014433.01.T01 MTR_6g034755 22.789 294 200 7 166 452 555 828 4.50e-13 72.8
MsG0380014433.01.T01 MTR_6g034350 52.096 334 127 2 176 509 1172 1472 2.81e-110 358
MsG0380014433.01.T01 MTR_6g034350 39.200 125 74 2 12 135 950 1073 1.58e-17 87.0
MsG0380014433.01.T01 MTR_6g034350 23.129 294 199 7 166 452 555 828 2.70e-13 73.6
MsG0380014433.01.T01 MTR_6g034230 51.929 337 124 3 176 509 1164 1465 1.96e-109 356
MsG0380014433.01.T01 MTR_6g034230 37.097 124 78 0 12 135 942 1065 5.48e-17 85.1
MsG0380014433.01.T01 MTR_6g034230 28.205 195 126 2 258 451 639 820 1.44e-14 77.4
MsG0380014433.01.T01 MTR_6g034335 51.622 339 121 4 176 509 1169 1469 2.35e-109 356
MsG0380014433.01.T01 MTR_6g034335 36.585 123 78 0 13 135 948 1070 2.69e-18 89.4
MsG0380014433.01.T01 MTR_6g034335 26.335 281 184 6 207 483 593 854 5.78e-12 69.3
MsG0380014433.01.T01 MTR_8g016070 49.552 335 137 1 175 509 1154 1456 4.11e-109 355
MsG0380014433.01.T01 MTR_8g016070 39.831 118 71 0 13 130 934 1051 8.08e-15 78.2
MsG0380014433.01.T01 MTR_8g016020 48.739 357 147 3 156 509 900 1223 8.63e-109 351
MsG0380014433.01.T01 MTR_8g016020 36.066 122 78 0 14 135 703 824 7.85e-16 81.3
MsG0380014433.01.T01 MTR_6g034265 50.733 341 136 1 176 516 1162 1470 2.89e-108 353
MsG0380014433.01.T01 MTR_6g034265 35.000 140 89 1 13 150 941 1080 3.83e-17 85.5
MsG0380014433.01.T01 MTR_6g034265 25.641 195 131 2 258 451 637 818 2.53e-11 67.0
MsG0380014433.01.T01 MTR_6g034310 50.599 334 133 1 176 509 789 1090 6.81e-108 347
MsG0380014433.01.T01 MTR_6g034310 38.462 143 80 3 13 150 568 707 3.85e-19 91.7
MsG0380014433.01.T01 MTR_6g034310 26.154 195 130 2 258 451 267 448 5.53e-12 68.9
MsG0380014433.01.T01 MTR_6g034270 51.445 346 126 3 176 516 981 1289 2.14e-106 345
MsG0380014433.01.T01 MTR_6g034270 39.683 126 70 2 13 135 760 882 3.73e-19 92.0
MsG0380014433.01.T01 MTR_6g034310 50.599 334 133 1 176 509 1147 1448 7.66e-106 346
MsG0380014433.01.T01 MTR_6g034310 38.462 143 80 3 13 150 926 1065 6.13e-19 91.3
MsG0380014433.01.T01 MTR_6g034310 26.154 195 130 2 258 451 625 806 5.24e-12 69.3
MsG0380014433.01.T01 MTR_2g436710 47.788 339 144 2 175 513 1195 1500 3.34e-105 344
MsG0380014433.01.T01 MTR_2g436710 37.419 155 85 2 9 162 970 1113 5.85e-18 88.2
MsG0380014433.01.T01 MTR_2g436680 47.493 339 145 2 175 513 1192 1497 8.01e-105 343
MsG0380014433.01.T01 MTR_2g436680 38.854 157 82 3 9 162 965 1110 2.72e-16 82.8
MsG0380014433.01.T01 MTR_8g061970 46.567 335 146 2 179 513 1196 1497 1.58e-102 337
MsG0380014433.01.T01 MTR_8g061970 36.111 144 81 1 19 162 978 1110 3.65e-14 76.3
MsG0380014433.01.T01 MTR_0196s0020 52.096 334 128 1 176 509 1164 1465 1.86e-101 334
MsG0380014433.01.T01 MTR_0196s0020 38.889 126 71 2 13 135 943 1065 2.55e-18 89.4
MsG0380014433.01.T01 MTR_0196s0020 25.641 195 131 2 258 451 639 820 2.26e-11 67.4
MsG0380014433.01.T01 MTR_2g436730 50.000 312 122 3 202 513 1221 1498 2.84e-100 330
MsG0380014433.01.T01 MTR_2g436730 36.774 155 86 2 9 162 969 1112 7.04e-16 81.6
MsG0380014433.01.T01 MTR_2g436730 27.419 186 121 4 268 452 667 839 9.66e-11 65.1
MsG0380014433.01.T01 MTR_1g088680 48.883 358 146 3 156 513 1192 1512 3.06e-100 330
MsG0380014433.01.T01 MTR_1g088680 40.708 113 67 0 23 135 997 1109 4.36e-15 79.0
MsG0380014433.01.T01 MTR_8g075940 70.233 215 37 3 228 441 81 269 2.33e-96 293
MsG0380014433.01.T01 MTR_1g099280 42.627 373 174 8 13 353 944 1308 8.83e-84 283
MsG0380014433.01.T01 MTR_1g099280 26.699 206 137 2 258 462 637 829 8.16e-13 71.6
MsG0380014433.01.T01 MTR_2g019020 41.787 347 163 2 172 511 713 1027 3.07e-78 266
MsG0380014433.01.T01 MTR_2g019020 41.787 347 163 2 172 511 931 1245 8.66e-78 266
MsG0380014433.01.T01 MTR_2g019020 41.787 347 163 2 172 511 1168 1482 8.96e-78 266
MsG0380014433.01.T01 MTR_2g019020 41.787 347 163 2 172 511 985 1299 9.07e-78 266
MsG0380014433.01.T01 MTR_2g019020 47.687 281 147 0 172 452 1168 1448 3.66e-77 265
MsG0380014433.01.T01 MTR_0019s0020 40.394 406 172 10 8 349 888 1287 6.66e-76 260
MsG0380014433.01.T01 MTR_0019s0020 25.296 253 166 6 207 454 539 773 2.43e-13 73.6
MsG0380014433.01.T01 MTR_3g011840 40.549 328 163 1 179 506 1094 1389 3.56e-74 256
MsG0380014433.01.T01 MTR_3g011820 40.244 328 164 1 179 506 1211 1506 4.40e-72 250
MsG0380014433.01.T01 MTR_2g105190 40.647 278 162 2 175 452 1178 1452 2.35e-66 233
MsG0380014433.01.T01 MTR_2g105190 26.909 275 169 8 193 451 570 828 1.55e-16 83.6
MsG0380014433.01.T01 MTR_6g034310 54.040 198 91 0 176 373 1147 1344 4.97e-64 226
MsG0380014433.01.T01 MTR_6g034310 38.462 143 80 3 13 150 926 1065 6.89e-19 91.3
MsG0380014433.01.T01 MTR_6g034310 26.154 195 130 2 258 451 625 806 3.83e-12 69.7
MsG0380014433.01.T01 MTR_1008s0010 51.205 166 49 1 350 515 1 134 5.55e-46 158
MsG0380014433.01.T01 MTR_2g018320 31.797 217 144 3 239 452 357 572 4.05e-34 137
MsG0380014433.01.T01 MTR_2g018320 28.571 217 150 3 239 451 1012 1227 1.37e-26 115
MsG0380014433.01.T01 MTR_6g078080 32.258 217 143 3 239 452 363 578 4.29e-34 137
MsG0380014433.01.T01 MTR_6g078080 29.032 217 149 3 239 451 1019 1234 4.25e-27 116
MsG0380014433.01.T01 MTR_7g051100 32.110 218 144 3 238 452 354 570 5.25e-34 137
MsG0380014433.01.T01 MTR_7g051100 27.660 235 161 4 226 452 978 1211 1.00e-29 124
MsG0380014433.01.T01 MTR_2g018530 32.258 217 143 3 239 452 367 582 8.94e-34 137
MsG0380014433.01.T01 MTR_2g018530 28.571 217 150 3 239 451 1023 1238 2.17e-26 114
MsG0380014433.01.T01 MTR_3g086430 31.336 217 145 3 239 452 999 1214 1.21e-33 136
MsG0380014433.01.T01 MTR_3g086430 30.876 217 146 3 239 452 343 558 5.29e-22 100
MsG0380014433.01.T01 MTR_1g086150 29.954 217 148 3 239 452 382 597 5.32e-33 134
MsG0380014433.01.T01 MTR_1g086150 29.358 218 147 4 239 451 1037 1252 9.57e-25 109
MsG0380014433.01.T01 MTR_3g107800 30.415 217 147 3 239 452 394 609 7.56e-33 134
MsG0380014433.01.T01 MTR_3g107800 26.613 248 168 5 216 451 994 1239 8.49e-22 100
MsG0380014433.01.T01 MTR_2g018350 30.876 217 146 3 239 452 357 572 2.07e-32 132
MsG0380014433.01.T01 MTR_2g018350 28.111 217 151 3 239 451 1014 1229 2.57e-26 114
MsG0380014433.01.T01 MTR_3g080220 29.032 217 150 3 239 452 393 608 5.12e-32 131
MsG0380014433.01.T01 MTR_3g080220 30.876 217 145 3 239 451 1051 1266 3.98e-25 110
MsG0380014433.01.T01 MTR_4g123990 31.336 217 145 3 239 452 376 591 7.69e-32 131
MsG0380014433.01.T01 MTR_4g123990 27.778 216 153 2 239 451 1034 1249 1.31e-25 112
MsG0380014433.01.T01 MTR_1g086080 29.032 217 150 3 239 452 387 602 1.05e-31 130
MsG0380014433.01.T01 MTR_1g086080 27.650 217 152 3 239 451 1042 1257 1.34e-24 108
MsG0380014433.01.T01 MTR_1g059830 29.493 217 150 1 239 452 378 594 5.49e-31 127
MsG0380014433.01.T01 MTR_5g075955 29.323 266 183 4 196 458 308 571 7.18e-31 127
MsG0380014433.01.T01 MTR_5g075955 29.323 266 183 4 196 458 420 683 8.20e-31 127
MsG0380014433.01.T01 MTR_4g124000 30.415 217 147 3 239 452 376 591 9.06e-31 127
MsG0380014433.01.T01 MTR_4g124040 30.876 217 146 3 239 452 194 409 9.99e-31 127
MsG0380014433.01.T01 MTR_4g124040 27.982 218 150 4 239 451 855 1070 8.61e-23 103
MsG0380014433.01.T01 MTR_4g124040 30.876 217 146 3 239 452 371 586 1.18e-30 127
MsG0380014433.01.T01 MTR_4g124040 27.982 218 150 4 239 451 1032 1247 9.36e-23 103
MsG0380014433.01.T01 MTR_4g124040 30.876 217 146 3 239 452 426 641 1.28e-30 127
MsG0380014433.01.T01 MTR_4g124040 27.982 218 150 4 239 451 1087 1302 1.05e-22 103
MsG0380014433.01.T01 MTR_4g124000 30.415 217 147 3 239 452 376 591 1.88e-30 127
MsG0380014433.01.T01 MTR_4g124000 29.493 217 148 3 239 451 1034 1249 8.85e-26 112
MsG0380014433.01.T01 MTR_6g009110 28.767 219 148 4 239 451 1016 1232 1.13e-29 124
MsG0380014433.01.T01 MTR_6g009110 28.231 294 192 7 168 451 296 580 3.25e-27 117
MsG0380014433.01.T01 MTR_5g029750 29.032 217 150 3 239 452 987 1202 1.37e-29 124
MsG0380014433.01.T01 MTR_5g029750 28.571 217 151 3 239 452 354 569 3.17e-25 110
MsG0380014433.01.T01 MTR_6g009200 28.440 218 150 4 239 451 1018 1234 1.45e-29 124
MsG0380014433.01.T01 MTR_6g009200 30.000 250 167 5 207 452 329 574 3.83e-28 119
MsG0380014433.01.T01 MTR_6g009080 28.440 218 150 4 239 451 211 427 1.76e-29 121
MsG0380014433.01.T01 MTR_6g008820 28.111 217 151 3 239 451 871 1086 1.77e-29 124
MsG0380014433.01.T01 MTR_6g008820 28.800 250 170 5 207 452 187 432 1.04e-27 118
MsG0380014433.01.T01 MTR_6g008820 28.111 217 151 3 239 451 1001 1216 2.03e-29 123
MsG0380014433.01.T01 MTR_6g008820 28.800 250 170 5 207 452 317 562 1.22e-27 118
MsG0380014433.01.T01 MTR_6g008820 28.111 217 151 3 239 451 787 1002 2.40e-29 123
MsG0380014433.01.T01 MTR_6g008820 31.183 186 127 1 268 452 163 348 1.04e-25 112
MsG0380014433.01.T01 MTR_6g009150 28.440 218 150 4 239 451 1015 1231 2.58e-29 123
MsG0380014433.01.T01 MTR_6g009150 29.044 272 181 6 185 452 312 575 5.00e-29 122
MsG0380014433.01.T01 MTR_2g105190 35.185 162 103 1 175 336 1172 1331 2.70e-29 123
MsG0380014433.01.T01 MTR_2g105190 26.715 277 167 8 193 451 564 822 1.20e-16 84.0
MsG0380014433.01.T01 MTR_6g008820 28.111 217 151 3 239 451 679 894 3.04e-29 122
MsG0380014433.01.T01 MTR_6g008820 29.817 218 149 3 238 452 24 240 4.52e-27 116
MsG0380014433.01.T01 MTR_3g093430 28.879 232 163 2 223 452 346 577 3.27e-29 123
MsG0380014433.01.T01 MTR_3g093430 30.417 240 153 5 226 452 980 1218 3.38e-26 114
MsG0380014433.01.T01 MTR_6g008800 29.600 250 168 5 207 452 329 574 4.20e-29 122
MsG0380014433.01.T01 MTR_6g008800 28.440 218 150 4 239 451 1005 1221 6.84e-29 122
MsG0380014433.01.T01 MTR_4g081190 29.954 217 148 3 239 452 988 1203 4.55e-29 122
MsG0380014433.01.T01 MTR_4g081190 32.258 217 143 3 239 452 341 556 1.63e-28 120
MsG0380014433.01.T01 MTR_1g025560 28.879 232 159 4 226 452 977 1207 8.91e-29 121
MsG0380014433.01.T01 MTR_1g025560 26.512 215 157 1 239 452 371 585 4.27e-19 91.7
MsG0380014433.01.T01 MTR_4g124050 29.032 217 150 3 239 452 394 609 9.68e-29 121
MsG0380014433.01.T01 MTR_6g009070 27.982 218 151 4 239 451 932 1148 1.01e-28 121
MsG0380014433.01.T01 MTR_6g009070 29.555 247 166 5 210 452 272 514 2.86e-28 120
MsG0380014433.01.T01 MTR_6g009030 28.440 218 150 4 239 451 997 1213 1.23e-28 121
MsG0380014433.01.T01 MTR_6g009030 29.675 246 165 5 210 451 332 573 5.22e-28 119
MsG0380014433.01.T01 MTR_4g124050 29.032 217 150 3 239 452 394 609 1.86e-28 120
MsG0380014433.01.T01 MTR_4g124050 27.189 217 153 3 239 451 1048 1263 7.38e-25 109
MsG0380014433.01.T01 MTR_7g102070 28.111 217 152 3 239 452 1079 1294 1.77e-27 117
MsG0380014433.01.T01 MTR_7g102070 28.704 216 150 3 239 451 424 638 5.60e-26 113
MsG0380014433.01.T01 MTR_4g077930 29.493 217 149 3 239 452 374 589 1.78e-27 117
MsG0380014433.01.T01 MTR_1309s0010 30.000 230 152 4 225 451 413 636 1.80e-27 117
MsG0380014433.01.T01 MTR_4g077930 29.493 217 149 3 239 452 265 480 2.96e-27 117
MsG0380014433.01.T01 MTR_4g077930 29.954 217 147 3 239 451 923 1138 2.28e-25 111
MsG0380014433.01.T01 MTR_4g077930 29.493 217 149 3 239 452 374 589 3.23e-27 117
MsG0380014433.01.T01 MTR_4g077930 29.954 217 147 3 239 451 1032 1247 2.87e-25 110
MsG0380014433.01.T01 MTR_6g465300 31.050 219 145 3 239 452 469 686 3.90e-27 116
MsG0380014433.01.T01 MTR_6g465300 31.050 219 145 3 239 452 469 686 4.15e-27 115
MsG0380014433.01.T01 MTR_6g009090 30.508 236 156 5 210 443 351 580 8.65e-27 114
MsG0380014433.01.T01 MTR_1g063170 27.315 216 153 3 239 451 1053 1267 1.20e-26 115
MsG0380014433.01.T01 MTR_1g063170 30.093 216 147 3 239 451 397 611 3.28e-26 114
MsG0380014433.01.T01 MTR_8g022270 28.627 255 164 6 216 456 1209 1459 6.49e-26 113
MsG0380014433.01.T01 MTR_8g022270 27.064 218 151 4 239 451 596 810 1.49e-22 102
MsG0380014433.01.T01 MTR_4g109720 30.909 220 143 4 239 452 385 601 1.14e-25 111
MsG0380014433.01.T01 MTR_5g075960 31.222 221 150 2 239 458 466 685 2.37e-25 110
MsG0380014433.01.T01 MTR_6g011680 27.442 215 152 3 239 450 361 574 2.42e-25 111
MsG0380014433.01.T01 MTR_6g011680 26.267 217 156 3 239 452 1006 1221 2.23e-24 108
MsG0380014433.01.T01 MTR_6g088670 25.926 216 158 2 239 452 1000 1215 8.30e-25 109
MsG0380014433.01.T01 MTR_6g088670 23.256 215 163 2 239 451 357 571 2.43e-17 86.3
MsG0380014433.01.T01 MTR_1g086095 29.358 218 147 4 239 451 254 469 1.54e-24 107
MsG0380014433.01.T01 MTR_7g033710 28.507 221 148 5 239 452 423 640 1.29e-22 102
MsG0380014433.01.T01 MTR_7g023340 30.137 219 148 4 238 452 1116 1333 2.44e-22 102
MsG0380014433.01.T01 MTR_7g023340 26.866 201 146 1 252 452 419 618 2.82e-20 95.5
MsG0380014433.01.T01 MTR_7g023340 30.137 219 148 4 238 452 1152 1369 2.74e-22 101
MsG0380014433.01.T01 MTR_7g023340 26.866 201 146 1 252 452 419 618 3.05e-20 95.5
MsG0380014433.01.T01 MTR_8g066710 26.728 217 155 3 239 452 512 727 8.36e-22 99.8
MsG0380014433.01.T01 MTR_1g115430 29.680 219 149 4 238 452 1143 1360 1.35e-21 99.8
MsG0380014433.01.T01 MTR_1g115430 25.000 216 159 2 239 452 397 611 8.04e-20 94.0
MsG0380014433.01.T01 MTR_8g107410 28.936 235 150 5 240 466 18 243 3.94e-21 93.2
MsG0380014433.01.T01 MTR_5g033080 31.016 187 121 3 272 452 488 672 1.64e-20 95.5
MsG0380014433.01.T01 MTR_5g033080 31.016 187 121 3 272 452 313 497 2.48e-20 94.7
MsG0380014433.01.T01 MTR_0019s0020 39.370 127 71 2 13 136 893 1016 2.25e-15 79.7
MsG0380014433.01.T01 MTR_0019s0020 25.941 239 158 5 221 454 549 773 2.59e-13 73.2
MsG0380014433.01.T01 MTR_6g084320 35.000 140 86 1 1 135 891 1030 2.62e-15 79.7
MsG0380014433.01.T01 MTR_5g075955 26.230 183 130 4 196 375 420 600 5.43e-15 78.2
MsG0380014433.01.T01 MTR_0019s0020 38.889 126 71 2 13 135 893 1015 7.22e-15 78.2
MsG0380014433.01.T01 MTR_0019s0020 25.296 253 166 6 207 454 539 773 2.42e-13 73.6
MsG0380014433.01.T01 MTR_5g075960 31.633 98 66 1 239 336 466 562 1.89e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014433.01.T01 AT3G13080 56.696 575 159 5 1 517 971 1513 0.0 631
MsG0380014433.01.T01 AT3G13080 59.381 517 149 5 1 456 971 1487 0.0 600
MsG0380014433.01.T01 AT3G13090 54.625 573 170 7 1 515 921 1461 0.0 599
MsG0380014433.01.T01 AT3G13100 54.783 575 170 7 1 517 943 1485 0.0 599
MsG0380014433.01.T01 AT3G13100 54.783 575 170 7 1 517 698 1240 0.0 598
MsG0380014433.01.T01 AT3G13080 52.348 575 159 6 1 517 971 1488 0.0 563
MsG0380014433.01.T01 AT3G60160 47.314 577 214 3 1 519 921 1465 1.14e-171 523
MsG0380014433.01.T01 AT3G60160 47.314 577 214 3 1 519 957 1501 2.10e-171 523
MsG0380014433.01.T01 AT1G04120 46.853 572 214 5 1 514 935 1474 7.07e-163 500
MsG0380014433.01.T01 AT1G04120 46.853 572 214 5 1 514 970 1509 1.22e-162 500
MsG0380014433.01.T01 AT1G04120 46.154 572 213 6 1 514 970 1504 2.31e-157 486
MsG0380014433.01.T01 AT3G60970 57.391 345 115 1 175 519 736 1048 6.17e-133 412
MsG0380014433.01.T01 AT3G60970 43.750 160 79 1 1 160 504 652 1.26e-34 139
MsG0380014433.01.T01 AT3G60970 22.348 264 173 5 198 452 174 414 1.09e-12 71.2
MsG0380014433.01.T01 AT3G21250 49.575 353 140 3 157 509 720 1034 8.18e-112 356
MsG0380014433.01.T01 AT3G21250 37.037 108 68 0 13 120 513 620 9.16e-13 71.6
MsG0380014433.01.T01 AT3G21250 49.575 353 140 3 157 509 720 1034 8.18e-112 356
MsG0380014433.01.T01 AT3G21250 37.037 108 68 0 13 120 513 620 9.16e-13 71.6
MsG0380014433.01.T01 AT3G59140 51.156 346 127 3 176 516 1142 1450 3.14e-111 360
MsG0380014433.01.T01 AT3G59140 39.496 119 66 2 13 128 921 1036 2.30e-17 86.3
MsG0380014433.01.T01 AT3G21250 51.045 335 131 2 175 509 1138 1439 4.81e-110 357
MsG0380014433.01.T01 AT3G21250 37.037 108 68 0 13 120 918 1025 1.46e-12 71.2
MsG0380014433.01.T01 AT3G21250 51.045 335 131 2 175 509 1144 1445 5.06e-110 357
MsG0380014433.01.T01 AT3G21250 37.037 108 68 0 13 120 924 1031 1.46e-12 71.2
MsG0380014433.01.T01 AT3G21250 51.045 335 131 2 175 509 1149 1450 5.73e-110 357
MsG0380014433.01.T01 AT3G21250 37.037 108 68 0 13 120 929 1036 1.46e-12 71.2
MsG0380014433.01.T01 AT3G21250 51.045 335 131 2 175 509 1155 1456 5.73e-110 357
MsG0380014433.01.T01 AT3G21250 37.037 108 68 0 13 120 935 1042 1.40e-12 71.2
MsG0380014433.01.T01 AT3G62700 51.917 339 130 2 175 513 1231 1536 7.70e-105 343
MsG0380014433.01.T01 AT3G62700 38.125 160 88 1 3 162 1001 1149 1.43e-17 87.0
MsG0380014433.01.T01 AT2G47800 51.032 339 133 2 175 513 1208 1513 1.48e-103 340
MsG0380014433.01.T01 AT2G47800 38.346 133 82 0 3 135 978 1110 8.32e-15 78.2
MsG0380014433.01.T01 AT1G30400 42.075 347 162 2 172 511 1168 1482 1.76e-77 266
MsG0380014433.01.T01 AT1G30400 42.075 347 162 2 172 511 1168 1482 1.76e-77 266
MsG0380014433.01.T01 AT2G34660 41.210 347 165 2 172 511 886 1200 6.57e-77 264
MsG0380014433.01.T01 AT2G34660 41.210 347 165 2 172 511 1173 1487 9.27e-77 264
MsG0380014433.01.T01 AT2G34660 41.210 347 165 2 172 511 1173 1487 9.27e-77 264
MsG0380014433.01.T01 AT1G30420 41.742 333 162 1 174 506 1168 1468 2.26e-75 259
MsG0380014433.01.T01 AT1G30420 23.784 185 128 2 268 451 643 815 2.76e-12 70.1
MsG0380014433.01.T01 AT1G30410 42.042 333 161 1 174 506 1168 1468 3.97e-75 259
MsG0380014433.01.T01 AT1G30410 22.703 185 130 2 268 451 643 815 8.36e-11 65.5
MsG0380014433.01.T01 AT1G30410 42.042 333 161 1 174 506 1168 1468 3.97e-75 259
MsG0380014433.01.T01 AT1G30410 22.703 185 130 2 268 451 643 815 8.36e-11 65.5
MsG0380014433.01.T01 AT1G30410 42.042 333 161 1 174 506 1168 1468 3.97e-75 259
MsG0380014433.01.T01 AT1G30410 22.703 185 130 2 268 451 643 815 8.36e-11 65.5
MsG0380014433.01.T01 AT1G30410 42.042 333 161 1 174 506 1171 1471 4.05e-75 259
MsG0380014433.01.T01 AT1G30410 22.703 185 130 2 268 451 646 818 8.37e-11 65.5
MsG0380014433.01.T01 AT1G30410 42.042 333 161 1 174 506 1053 1353 4.25e-75 258
MsG0380014433.01.T01 AT3G60160 61.453 179 69 0 175 353 1189 1367 1.46e-71 248
MsG0380014433.01.T01 AT3G60160 48.889 135 69 0 1 135 957 1091 9.56e-35 140
MsG0380014433.01.T01 AT2G07680 41.516 277 159 2 175 451 1110 1383 7.93e-65 229
MsG0380014433.01.T01 AT2G07680 23.985 271 174 6 193 452 519 768 6.24e-14 75.5
MsG0380014433.01.T01 AT2G07680 41.516 277 159 2 175 451 1104 1377 8.37e-65 229
MsG0380014433.01.T01 AT2G07680 23.985 271 174 6 193 452 513 762 5.97e-14 75.5
MsG0380014433.01.T01 AT2G07680 41.516 277 159 2 175 451 1101 1374 1.05e-64 228
MsG0380014433.01.T01 AT2G07680 23.985 271 174 6 193 452 510 759 7.28e-14 75.1
MsG0380014433.01.T01 AT2G07680 41.516 277 159 2 175 451 1126 1399 1.08e-64 228
MsG0380014433.01.T01 AT2G07680 23.985 271 174 6 193 452 535 784 7.12e-14 75.5
MsG0380014433.01.T01 AT2G07680 41.516 277 159 2 175 451 1027 1300 1.22e-64 228
MsG0380014433.01.T01 AT2G07680 23.985 271 174 6 193 452 436 685 7.83e-14 75.1
MsG0380014433.01.T01 AT1G30410 41.919 198 115 0 174 371 1168 1365 2.85e-45 171
MsG0380014433.01.T01 AT1G30410 22.703 185 130 2 268 451 643 815 6.39e-11 65.9
MsG0380014433.01.T01 AT3G13080 56.204 137 60 0 1 137 971 1107 2.69e-40 156
MsG0380014433.01.T01 AT3G13080 56.204 137 60 0 1 137 971 1107 2.69e-40 156
MsG0380014433.01.T01 AT2G47000 31.336 217 145 3 239 452 382 597 2.25e-34 138
MsG0380014433.01.T01 AT2G47000 31.336 217 145 3 239 452 382 597 2.77e-34 138
MsG0380014433.01.T01 AT2G47000 31.336 217 145 3 239 452 382 597 2.99e-34 138
MsG0380014433.01.T01 AT2G47000 31.336 217 145 3 239 452 382 597 2.99e-34 138
MsG0380014433.01.T01 AT2G47000 31.336 217 145 3 239 452 382 597 3.57e-34 138
MsG0380014433.01.T01 AT2G47000 26.728 217 154 3 239 451 1040 1255 9.56e-25 109
MsG0380014433.01.T01 AT2G47000 31.336 217 145 3 239 452 382 597 3.57e-34 138
MsG0380014433.01.T01 AT2G47000 26.728 217 154 3 239 451 1040 1255 9.56e-25 109
MsG0380014433.01.T01 AT2G47000 31.336 217 145 3 239 452 382 597 3.57e-34 138
MsG0380014433.01.T01 AT2G47000 26.728 217 154 3 239 451 1040 1255 9.56e-25 109
MsG0380014433.01.T01 AT4G18050 32.258 217 143 3 239 452 353 568 9.25e-34 137
MsG0380014433.01.T01 AT4G18050 30.876 217 145 3 239 451 991 1206 4.96e-28 119
MsG0380014433.01.T01 AT4G18050 32.258 217 143 3 239 452 363 578 9.46e-34 137
MsG0380014433.01.T01 AT4G18050 30.876 217 145 3 239 451 1001 1216 4.72e-28 119
MsG0380014433.01.T01 AT5G46540 31.336 217 145 3 239 452 355 570 1.16e-32 133
MsG0380014433.01.T01 AT5G46540 30.415 217 146 3 239 451 1003 1218 5.33e-29 122
MsG0380014433.01.T01 AT3G62150 29.954 217 148 3 239 452 401 616 3.02e-32 132
MsG0380014433.01.T01 AT3G62150 27.189 217 153 3 239 451 1050 1265 1.89e-25 111
MsG0380014433.01.T01 AT3G62150 29.954 217 148 3 239 452 401 616 3.02e-32 132
MsG0380014433.01.T01 AT3G62150 27.189 217 153 3 239 451 1050 1265 1.89e-25 111
MsG0380014433.01.T01 AT3G62150 29.954 217 148 3 239 452 401 616 3.02e-32 132
MsG0380014433.01.T01 AT3G62150 27.189 217 153 3 239 451 1050 1265 1.89e-25 111
MsG0380014433.01.T01 AT1G02520 29.032 217 150 3 239 452 379 594 8.21e-31 128
MsG0380014433.01.T01 AT1G02520 29.224 219 148 3 239 451 1030 1247 6.26e-28 119
MsG0380014433.01.T01 AT1G02520 29.032 217 150 3 239 452 379 594 8.21e-31 128
MsG0380014433.01.T01 AT1G02520 29.224 219 148 3 239 451 1030 1247 6.26e-28 119
MsG0380014433.01.T01 AT1G02520 29.032 217 150 3 239 452 379 594 8.21e-31 128
MsG0380014433.01.T01 AT1G02520 29.224 219 148 3 239 451 1030 1247 6.26e-28 119
MsG0380014433.01.T01 AT1G02530 29.032 217 150 3 239 452 366 581 1.20e-30 127
MsG0380014433.01.T01 AT4G28620 31.628 215 145 2 239 452 437 650 1.30e-30 126
MsG0380014433.01.T01 AT1G02530 29.032 217 150 3 239 452 366 581 2.11e-30 126
MsG0380014433.01.T01 AT1G02530 28.767 219 149 3 239 451 1025 1242 8.11e-28 119
MsG0380014433.01.T01 AT5G58270 30.672 238 153 3 216 452 464 690 9.03e-30 124
MsG0380014433.01.T01 AT4G28630 31.163 215 146 2 239 452 435 648 1.54e-29 123
MsG0380014433.01.T01 AT1G27940 30.233 215 149 1 239 452 156 370 1.84e-29 123
MsG0380014433.01.T01 AT1G27940 28.017 232 161 4 226 452 773 1003 1.66e-27 117
MsG0380014433.01.T01 AT1G27940 30.233 215 149 1 239 452 370 584 2.34e-29 123
MsG0380014433.01.T01 AT1G27940 28.017 232 161 4 226 452 987 1217 2.02e-27 117
MsG0380014433.01.T01 AT5G03910 31.102 254 157 5 208 452 366 610 8.17e-29 120
MsG0380014433.01.T01 AT1G28010 30.698 215 148 1 239 452 371 585 1.62e-28 120
MsG0380014433.01.T01 AT1G28010 27.982 218 151 4 239 452 1004 1219 1.10e-24 109
MsG0380014433.01.T01 AT4G01830 28.571 217 151 3 239 452 351 566 2.02e-28 120
MsG0380014433.01.T01 AT4G01830 30.303 198 135 1 257 451 1002 1199 7.83e-27 115
MsG0380014433.01.T01 AT4G01830 28.571 217 151 3 239 452 117 332 2.10e-28 120
MsG0380014433.01.T01 AT4G01830 30.303 198 135 1 257 451 768 965 7.38e-27 115
MsG0380014433.01.T01 AT4G01820 28.571 217 151 3 239 452 346 561 3.82e-28 119
MsG0380014433.01.T01 AT4G01820 28.571 217 151 3 239 452 346 561 8.13e-28 119
MsG0380014433.01.T01 AT4G01820 27.861 201 136 2 257 451 1001 1198 1.56e-21 99.4
MsG0380014433.01.T01 AT3G28380 29.661 236 154 4 226 452 978 1210 8.54e-28 119
MsG0380014433.01.T01 AT3G28380 27.372 274 190 5 182 452 305 572 6.05e-26 113
MsG0380014433.01.T01 AT5G39040 28.800 250 159 6 209 452 374 610 9.95e-28 117
MsG0380014433.01.T01 AT3G28345 28.571 245 169 4 210 451 330 571 1.34e-27 118
MsG0380014433.01.T01 AT3G28345 27.935 247 160 5 214 452 974 1210 3.24e-24 107
MsG0380014433.01.T01 AT1G10680 28.571 217 151 3 239 452 980 1195 1.54e-27 117
MsG0380014433.01.T01 AT1G10680 26.383 235 165 4 225 452 341 574 2.51e-25 111
MsG0380014433.01.T01 AT4G25450 33.333 219 140 3 239 452 468 685 1.84e-27 117
MsG0380014433.01.T01 AT4G25450 33.036 224 142 4 234 452 296 516 1.87e-27 116
MsG0380014433.01.T01 AT4G25960 29.032 217 150 3 239 452 399 614 2.07e-27 117
MsG0380014433.01.T01 AT4G25960 27.189 217 154 3 239 452 1028 1243 4.27e-26 113
MsG0380014433.01.T01 AT2G36910 28.111 217 152 3 239 452 1022 1237 1.19e-26 115
MsG0380014433.01.T01 AT2G36910 29.167 216 149 3 239 451 366 580 2.34e-25 111
MsG0380014433.01.T01 AT3G28360 30.093 216 147 3 239 451 344 558 1.64e-26 114
MsG0380014433.01.T01 AT3G28360 29.032 217 148 3 242 452 980 1196 3.89e-24 107
MsG0380014433.01.T01 AT3G28390 27.468 233 161 4 226 451 963 1194 1.99e-26 114
MsG0380014433.01.T01 AT3G28390 29.032 217 150 3 239 452 345 560 5.03e-26 113
MsG0380014433.01.T01 AT3G28415 26.619 278 191 7 180 452 282 551 2.03e-26 114
MsG0380014433.01.T01 AT3G28415 28.390 236 157 4 226 452 959 1191 4.51e-26 113
MsG0380014433.01.T01 AT3G28415 26.619 278 191 7 180 452 290 559 2.39e-26 114
MsG0380014433.01.T01 AT3G28415 27.897 233 162 3 226 452 967 1199 5.56e-26 113
MsG0380014433.01.T01 AT1G10680 26.383 235 165 4 225 452 341 574 2.16e-25 111
MsG0380014433.01.T01 AT1G10680 27.869 183 128 3 239 418 980 1161 1.68e-19 93.2
MsG0380014433.01.T01 AT3G28860 28.571 217 151 3 239 452 363 578 7.36e-25 109
MsG0380014433.01.T01 AT3G28860 25.346 217 158 3 239 452 1008 1223 7.73e-24 106
MsG0380014433.01.T01 AT2G39480 28.767 219 151 4 238 452 1155 1372 6.88e-21 97.4
MsG0380014433.01.T01 AT2G39480 25.463 216 158 2 239 452 410 624 3.04e-20 95.5
MsG0380014433.01.T01 AT1G67940 28.959 221 138 6 240 452 28 237 7.25e-21 92.8
MsG0380014433.01.T01 AT2G39480 28.767 219 151 4 238 452 975 1192 7.34e-21 97.4
MsG0380014433.01.T01 AT2G39480 25.463 216 158 2 239 452 230 444 3.30e-20 95.1
MsG0380014433.01.T01 AT3G55320 27.854 219 153 4 238 452 1156 1373 4.14e-20 95.1
MsG0380014433.01.T01 AT3G55320 24.074 270 194 3 185 452 366 626 7.74e-20 94.4
MsG0380014433.01.T01 AT1G70610 27.149 221 152 4 239 452 272 490 4.65e-20 93.6
MsG0380014433.01.T01 AT1G70610 27.149 221 152 4 239 452 453 671 5.30e-20 94.4
MsG0380014433.01.T01 AT2G07680 23.985 271 174 6 193 452 535 784 4.99e-14 75.9
MsG0380014433.01.T01 AT1G71330 54.412 68 31 0 1 68 243 310 2.07e-13 71.6
MsG0380014433.01.T01 AT1G30420 23.784 185 128 2 268 451 643 815 1.52e-12 70.9
MsG0380014433.01.T01 AT4G39850 29.577 213 135 6 241 448 448 650 7.68e-12 68.9
MsG0380014433.01.T01 AT4G39850 29.577 213 135 6 241 448 448 650 7.86e-12 68.6
MsG0380014433.01.T01 AT4G39850 29.577 213 135 6 241 448 448 650 7.86e-12 68.6
MsG0380014433.01.T01 AT4G39850 29.577 213 135 6 241 448 448 650 8.21e-12 68.6
MsG0380014433.01.T01 AT4G25450 32.895 152 96 3 239 385 468 618 9.76e-12 68.2
MsG0380014433.01.T01 AT5G39040 28.169 142 85 5 209 344 374 504 8.94e-11 64.7

Find 118 sgRNAs with CRISPR-Local

Find 251 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCATATTAAGTGTCGTTTA+AGG 0.190345 3:-54801697 MsG0380014433.01.T01:intron
TATGGTTGTCTATGTTTCTT+TGG 0.191890 3:-54802372 MsG0380014433.01.T01:CDS
CTGTACAAAATAATTTAATT+TGG 0.221776 3:-54801020 MsG0380014433.01.T01:CDS
TATTGGAAATCTTACTCTTA+TGG 0.256200 3:-54802390 MsG0380014433.01.T01:CDS
TAAACATTCCAAATGTAGTA+TGG 0.264149 3:-54801847 MsG0380014433.01.T01:CDS
ATAAAACTTCATTCCTTTCC+AGG 0.280866 3:-54801084 MsG0380014433.01.T01:CDS
CTTCAATGTTGTTCAGGTCT+TGG 0.314573 3:-54801816 MsG0380014433.01.T01:CDS
AGAGTAAGATTTCCAATATC+AGG 0.319084 3:+54802395 None:intergenic
AGTATACAGATGAACAGATT+TGG 0.324301 3:-54799922 MsG0380014433.01.T01:CDS
AGTTACCTTCAATGTTGTTC+AGG 0.324646 3:-54801822 MsG0380014433.01.T01:CDS
CGTGAATTGGCACGATTAAC+TGG 0.342906 3:-54801419 MsG0380014433.01.T01:intron
AATAATTTAATTTGGTTACT+TGG 0.343017 3:-54801012 MsG0380014433.01.T01:CDS
ATTCGGAGAGGTTCATATTC+AGG 0.343245 3:-54800878 MsG0380014433.01.T01:CDS
GGCTTTGGCAACTCCTGTTT+CGG 0.343606 3:-54802429 MsG0380014433.01.T01:CDS
GTCTATGTTTCTTTGGCAAT+TGG 0.346553 3:-54802365 MsG0380014433.01.T01:CDS
AGGAGATCAAACACTGGTTT+TGG 0.347419 3:-54798681 MsG0380014433.01.T01:CDS
TTCAATGTTGTTCAGGTCTT+GGG 0.349503 3:-54801815 MsG0380014433.01.T01:CDS
CTTTCCAGGTATTGCGGGAT+TGG 0.354680 3:-54801070 MsG0380014433.01.T01:CDS
AGAATTGTTGAGCCTGTTGC+AGG 0.354998 3:-54800076 MsG0380014433.01.T01:CDS
AGAACCAACCCGATCATTCT+TGG 0.358291 3:-54800906 MsG0380014433.01.T01:CDS
GCAACTGCAGAACCTGATAT+TGG 0.359303 3:-54802407 MsG0380014433.01.T01:CDS
TTTCTTCATGCTGATCCTGC+AGG 0.360140 3:-54798786 MsG0380014433.01.T01:CDS
GGTTCATATTCAGGATTTAC+AGG 0.363651 3:-54800869 MsG0380014433.01.T01:intron
TTGTCCTTAAGCAACTTCTT+TGG 0.367655 3:+54798741 None:intergenic
TGATTGGAATCCATGATTTA+CGG 0.369802 3:-54800021 MsG0380014433.01.T01:CDS
TTTACTGGTGGAGTGAAAAC+TGG 0.374560 3:-54800151 MsG0380014433.01.T01:CDS
TACTCTGCATCAGCGTGAAT+TGG 0.386833 3:-54801432 MsG0380014433.01.T01:CDS
TTACTGAGAATGGAGAAAAT+TGG 0.387665 3:-54799100 MsG0380014433.01.T01:CDS
GGTTCTGCAGTTGCCGAAAC+AGG 0.388124 3:+54802416 None:intergenic
ACTTAAGAAAAGCAAGATCT+TGG 0.401678 3:-54799036 MsG0380014433.01.T01:CDS
GTAACTCCCCATACTACATT+TGG 0.403288 3:+54801839 None:intergenic
GCGGGATTGGCTGTGACATA+TGG 0.408848 3:-54801057 MsG0380014433.01.T01:CDS
CATTCCTTTCCAGGTATTGC+GGG 0.412430 3:-54801075 MsG0380014433.01.T01:CDS
AACATCAACGTCTCATTGAT+TGG 0.412861 3:-54800037 MsG0380014433.01.T01:CDS
AAGCAATTATTGGATGGCTT+TGG 0.418159 3:-54802444 None:intergenic
ACTGGCATCGTGGGAAGAAC+AGG 0.418562 3:-54800133 MsG0380014433.01.T01:CDS
CTGAGGGATTATGCTTAGTC+TGG 0.420978 3:+54799997 None:intergenic
TTCACCAAAGAAGTTGCTTA+AGG 0.423028 3:-54798745 MsG0380014433.01.T01:CDS
AATTTGGTTACTTGGCGGTT+TGG 0.423202 3:-54801004 MsG0380014433.01.T01:CDS
GCAGTTCTTGCTGCAATAGC+TGG 0.429485 3:-54802317 MsG0380014433.01.T01:CDS
GTATACAGATGAACAGATTT+GGG 0.433206 3:-54799921 MsG0380014433.01.T01:CDS
TGTTTATATCTACAAAACTT+TGG 0.436131 3:+54801864 None:intergenic
TATAGTATTGATTCCTGTCA+TGG 0.459028 3:-54801753 MsG0380014433.01.T01:CDS
GATGTCTCAAGTTGCGTGGC+AGG 0.462604 3:-54801780 MsG0380014433.01.T01:CDS
CTGTCATGGCAACTTGCATA+TGG 0.465045 3:-54801739 MsG0380014433.01.T01:CDS
ATTATAAGAGGTGCTTCACT+TGG 0.466296 3:+54800934 None:intergenic
GGAAGTTCGTTTGCCACCCT+TGG 0.475078 3:-54802344 MsG0380014433.01.T01:CDS
ACAGCCAATCCCGCAATACC+TGG 0.475653 3:+54801066 None:intergenic
GAATGACGGCCAAGAATGAT+CGG 0.480908 3:+54800897 None:intergenic
CTATTAAGAATTCTTCCACT+TGG 0.483385 3:+54802215 None:intergenic
AAACATTCCAAATGTAGTAT+GGG 0.483649 3:-54801846 MsG0380014433.01.T01:CDS
TTCTTCATGCTGATCCTGCA+GGG 0.483710 3:-54798785 MsG0380014433.01.T01:CDS
CGGGATTGGCTGTGACATAT+GGG 0.484636 3:-54801056 MsG0380014433.01.T01:CDS
CAAAGACAGTTGGTCTGCCT+CGG 0.490697 3:-54799068 MsG0380014433.01.T01:CDS
GATCATTCTTGGCCGTCATT+CGG 0.490942 3:-54800895 MsG0380014433.01.T01:CDS
CAAGACCTGAACAACATTGA+AGG 0.492967 3:+54801817 None:intergenic
TCCTCACTTCATCTCCAAGT+TGG 0.497089 3:+54799796 None:intergenic
TATACTCTTCGAGCGGGTCC+AGG 0.499896 3:+54799939 None:intergenic
CAGGATCCAACGATGTTTGA+AGG 0.503920 3:-54799977 MsG0380014433.01.T01:CDS
GATGAAGTGAGGAAGAAAGA+AGG 0.504952 3:-54799786 MsG0380014433.01.T01:CDS
GCTCTAGATATGTGCCAACT+TGG 0.505316 3:-54799810 MsG0380014433.01.T01:CDS
AATTTAATTTGGTTACTTGG+CGG 0.507094 3:-54801009 MsG0380014433.01.T01:CDS
GAAGGAAAGCTTGACTCCAC+AGG 0.508408 3:-54799768 MsG0380014433.01.T01:intron
TAAATTGTGACAAATAAAGA+AGG 0.511090 3:+54798838 None:intergenic
CAGCAAGAACTGCTCTGCCA+AGG 0.516906 3:+54802327 None:intergenic
AAGAGGTGCTTCACTTGGGA+TGG 0.517304 3:+54800939 None:intergenic
TATTCCTCAATAAGCCCTGC+AGG 0.518717 3:+54798771 None:intergenic
GTTCTGGCAGTTACTGAGAA+TGG 0.523598 3:-54799110 MsG0380014433.01.T01:intron
AATGGAGAAAATTGGAGCAT+GGG 0.524373 3:-54799092 MsG0380014433.01.T01:CDS
ATGGTTCTGTTTCTTAGTGA+AGG 0.527643 3:-54798882 MsG0380014433.01.T01:CDS
CATATGCAAGTTGCCATGAC+AGG 0.529298 3:+54801740 None:intergenic
ACAGTCCCTTCAAACATCGT+TGG 0.543559 3:+54799971 None:intergenic
CAATCCCGCAATACCTGGAA+AGG 0.543887 3:+54801071 None:intergenic
AAGAATTCTTCCACTTGGTG+TGG 0.545932 3:+54802220 None:intergenic
TCATTCCTTTCCAGGTATTG+CGG 0.546921 3:-54801076 MsG0380014433.01.T01:CDS
GGCAACTTGCATATGGTACC+AGG 0.551598 3:-54801732 MsG0380014433.01.T01:CDS
TCAAACATCGTTGGATCCTG+AGG 0.555940 3:+54799980 None:intergenic
TTAGTCTGGACCGTAAATCA+TGG 0.562117 3:+54800011 None:intergenic
CAGACTAAGCATAATCCCTC+AGG 0.564325 3:-54799996 MsG0380014433.01.T01:CDS
AGGTGCTTCACTTGGGATGG+AGG 0.566785 3:+54800942 None:intergenic
AATGACGGCCAAGAATGATC+GGG 0.567852 3:+54800898 None:intergenic
GAGCATGGGGCAAAGACAGT+TGG 0.571915 3:-54799078 MsG0380014433.01.T01:CDS
AAATTGTGACAAATAAAGAA+GGG 0.573897 3:+54798839 None:intergenic
AGCAAGAACTGCTCTGCCAA+GGG 0.578698 3:+54802328 None:intergenic
GAATGGAGAAAATTGGAGCA+TGG 0.581056 3:-54799093 MsG0380014433.01.T01:CDS
TGATCCTGCAGGGCTTATTG+AGG 0.581505 3:-54798775 MsG0380014433.01.T01:CDS
TTATAAGAGGTGCTTCACTT+GGG 0.592105 3:+54800935 None:intergenic
ATCGTGGGAAGAACAGGAAG+TGG 0.593714 3:-54800127 MsG0380014433.01.T01:CDS
ACAGAACCATGTCGCTGTCG+AGG 0.599914 3:+54798895 None:intergenic
AGGATCCAACGATGTTTGAA+GGG 0.603988 3:-54799976 MsG0380014433.01.T01:CDS
CGTAAAACAAGAGGCATGTG+AGG 0.605682 3:+54800190 None:intergenic
AGGGACTGTAAGAAGTAACC+TGG 0.609030 3:-54799957 MsG0380014433.01.T01:CDS
AACATTCCAAATGTAGTATG+GGG 0.611190 3:-54801845 MsG0380014433.01.T01:CDS
TTCAATCCTCGACAGCGACA+TGG 0.612352 3:-54798901 MsG0380014433.01.T01:CDS
CAAACATCGTTGGATCCTGA+GGG 0.613259 3:+54799981 None:intergenic
TGAAGTGATTCTATGAGCAA+TGG 0.615540 3:+54798920 None:intergenic
TATGACACAAGGAGACTACC+TGG 0.616507 3:+54801714 None:intergenic
CATCTGTATACTCTTCGAGC+GGG 0.617503 3:+54799933 None:intergenic
GTAAGTCCACGTAAAACAAG+AGG 0.617518 3:+54800181 None:intergenic
AATTGTGACAAATAAAGAAG+GGG 0.618723 3:+54798840 None:intergenic
TTCTTGGCCGTCATTCGGAG+AGG 0.618980 3:-54800890 MsG0380014433.01.T01:CDS
ATATGAACCTCTCCGAATGA+CGG 0.619502 3:+54800883 None:intergenic
ATGGAGAAAATTGGAGCATG+GGG 0.627161 3:-54799091 MsG0380014433.01.T01:CDS
TCATCTGTATACTCTTCGAG+CGG 0.629759 3:+54799932 None:intergenic
AAGAACTGCTCTGCCAAGGG+TGG 0.629947 3:+54802331 None:intergenic
ATTGTGACAAATAAAGAAGG+GGG 0.639509 3:+54798841 None:intergenic
GGAGTGAAAACTGGCATCGT+GGG 0.640466 3:-54800142 MsG0380014433.01.T01:CDS
ACGGCCAAGAATGATCGGGT+TGG 0.641200 3:+54800902 None:intergenic
TTGACTGAAGAGCATTGTGG+AGG 0.650886 3:+54802286 None:intergenic
CTGTGATGTCTCAAGTTGCG+TGG 0.659444 3:-54801784 MsG0380014433.01.T01:CDS
AACTAGTTGCAGAATACACA+AGG 0.664070 3:-54798701 MsG0380014433.01.T01:CDS
CATTTGACTGAAGAGCATTG+TGG 0.682039 3:+54802283 None:intergenic
ACGACACTTAATATGACACA+AGG 0.685116 3:+54801703 None:intergenic
TACAGATGAACAGATTTGGG+AGG 0.694220 3:-54799918 MsG0380014433.01.T01:intron
TGGAGTGAAAACTGGCATCG+TGG 0.702661 3:-54800143 MsG0380014433.01.T01:CDS
TACACAAGGAGATCAAACAC+TGG 0.705912 3:-54798687 MsG0380014433.01.T01:CDS
TCTTAAGTAGAACACGTCCG+AGG 0.708328 3:+54799051 None:intergenic
GCCAACTTGGAGATGAAGTG+AGG 0.733695 3:-54799797 MsG0380014433.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATATCATTGATTTTATAT+CGG - Chr3:54801801-54801820 MsG0380014433.01.T01:CDS 10.0%
!! AGTTATTAGTTATTATGTAA+TGG - Chr3:54800444-54800463 MsG0380014433.01.T01:intron 15.0%
!! ATATAAAACAAATGTAACAT+TGG + Chr3:54800536-54800555 None:intergenic 15.0%
!! CTGTACAAAATAATTTAATT+TGG - Chr3:54800085-54800104 MsG0380014433.01.T01:CDS 15.0%
!!! AACTTTTTTAGAAATTGTTA+CGG - Chr3:54801826-54801845 MsG0380014433.01.T01:CDS 15.0%
!!! AATAATTTAATTTGGTTACT+TGG - Chr3:54800093-54800112 MsG0380014433.01.T01:CDS 15.0%
!!! TTTTATATGTTTACTCATAA+TGG - Chr3:54800548-54800567 MsG0380014433.01.T01:intron 15.0%
!! AAATTGTGACAAATAAAGAA+GGG + Chr3:54802269-54802288 None:intergenic 20.0%
!! ATATGATCAAAATGGTAAAA+AGG + Chr3:54799164-54799183 None:intergenic 20.0%
!! GTCAATATCTAATGATAATA+AGG - Chr3:54801392-54801411 MsG0380014433.01.T01:intron 20.0%
!! TAAATTGTGACAAATAAAGA+AGG + Chr3:54802270-54802289 None:intergenic 20.0%
!! TACCATTCATTTAAATCTAA+TGG + Chr3:54798980-54798999 None:intergenic 20.0%
!! TGTTTATATCTACAAAACTT+TGG + Chr3:54799244-54799263 None:intergenic 20.0%
!! TTCATTCAATATGATCAAAA+TGG + Chr3:54799172-54799191 None:intergenic 20.0%
!! TTTGTATAACTTGAACTAAA+AGG + Chr3:54801249-54801268 None:intergenic 20.0%
!!! AATATTTTGTGACATGTTTT+AGG - Chr3:54801273-54801292 MsG0380014433.01.T01:intron 20.0%
!!! AATTATTTTGTACAGCATTT+AGG + Chr3:54800080-54800099 None:intergenic 20.0%
!!! GTAACAATTTCTAAAAAAGT+TGG + Chr3:54801827-54801846 None:intergenic 20.0%
!!! TGAATTTTCTTGTCTAATTT+TGG - Chr3:54799188-54799207 MsG0380014433.01.T01:intron 20.0%
!!! TGGTTTTACATTTTTGTTAT+AGG - Chr3:54799208-54799227 MsG0380014433.01.T01:intron 20.0%
!!! TTGATTTTATTTGTTTCCTT+GGG - Chr3:54801860-54801879 MsG0380014433.01.T01:CDS 20.0%
!!! TTTGATTTTATTTGTTTCCT+TGG - Chr3:54801859-54801878 MsG0380014433.01.T01:CDS 20.0%
! AAAAATAAGCCAATCGAAAT+AGG + Chr3:54800712-54800731 None:intergenic 25.0%
! AAACATTCCAAATGTAGTAT+GGG - Chr3:54799259-54799278 MsG0380014433.01.T01:intron 25.0%
! AATTGTGACAAATAAAGAAG+GGG + Chr3:54802268-54802287 None:intergenic 25.0%
! GACCATTAGATTTAAATGAA+TGG - Chr3:54798975-54798994 MsG0380014433.01.T01:CDS 25.0%
! TAAACATTCCAAATGTAGTA+TGG - Chr3:54799258-54799277 MsG0380014433.01.T01:intron 25.0%
! TAAGCTACTTCTATAACAAA+TGG + Chr3:54800792-54800811 None:intergenic 25.0%
! TACATGAAATTAGTATCGTT+AGG - Chr3:54800368-54800387 MsG0380014433.01.T01:intron 25.0%
! TATTGGAAATCTTACTCTTA+TGG - Chr3:54798715-54798734 MsG0380014433.01.T01:CDS 25.0%
! TCAGAAAAATGTTGTATAAC+TGG + Chr3:54799725-54799744 None:intergenic 25.0%
! TTAAACTTGAAATACTCACT+AGG + Chr3:54799960-54799979 None:intergenic 25.0%
! TTAGTATACTCGATGATTTA+AGG + Chr3:54799445-54799464 None:intergenic 25.0%
!! ATTAAGTTGTTTATCTGAGA+GGG - Chr3:54800857-54800876 MsG0380014433.01.T01:intron 25.0%
!! TATTAAGTTGTTTATCTGAG+AGG - Chr3:54800856-54800875 MsG0380014433.01.T01:intron 25.0%
!! TGGTTCTCTTTTATTATAAG+AGG + Chr3:54800186-54800205 None:intergenic 25.0%
!!! AATTTAATTTGGTTACTTGG+CGG - Chr3:54800096-54800115 MsG0380014433.01.T01:CDS 25.0%
AAAAGAAAAAACCAAACCCA+AGG + Chr3:54801879-54801898 None:intergenic 30.0%
AACACTAATGTCATATACAC+TGG - Chr3:54800340-54800359 MsG0380014433.01.T01:intron 30.0%
AACATTCCAAATGTAGTATG+GGG - Chr3:54799260-54799279 MsG0380014433.01.T01:intron 30.0%
AATAGTATTTGCTTTCTGCT+TGG - Chr3:54799898-54799917 MsG0380014433.01.T01:intron 30.0%
ACCAAGAATGATCTATATGA+AGG + Chr3:54800303-54800322 None:intergenic 30.0%
ACCTTCATATAGATCATTCT+TGG - Chr3:54800299-54800318 MsG0380014433.01.T01:intron 30.0%
ACTTAAGAAAAGCAAGATCT+TGG - Chr3:54802069-54802088 MsG0380014433.01.T01:intron 30.0%
AGAGTAAGATTTCCAATATC+AGG + Chr3:54798713-54798732 None:intergenic 30.0%
AGTATACAGATGAACAGATT+TGG - Chr3:54801183-54801202 MsG0380014433.01.T01:intron 30.0%
AGTCGTTATATTTACGACAA+AGG - Chr3:54801370-54801389 MsG0380014433.01.T01:intron 30.0%
ATAAAACTTCATTCCTTTCC+AGG - Chr3:54800021-54800040 MsG0380014433.01.T01:CDS 30.0%
ATTGTGACAAATAAAGAAGG+GGG + Chr3:54802267-54802286 None:intergenic 30.0%
CCATAATATGATATGTGACA+GGG - Chr3:54801777-54801796 MsG0380014433.01.T01:CDS 30.0%
CCTGTCACATATCATATTAT+GGG + Chr3:54801779-54801798 None:intergenic 30.0%
CTATTAAGAATTCTTCCACT+TGG + Chr3:54798893-54798912 None:intergenic 30.0%
CTGTCACATATCATATTATG+GGG + Chr3:54801778-54801797 None:intergenic 30.0%
CTTGAGAAGAGTTTATAAAG+AGG - Chr3:54801682-54801701 MsG0380014433.01.T01:intron 30.0%
GACAGCTTATGAAAATAGTT+TGG - Chr3:54800756-54800775 MsG0380014433.01.T01:intron 30.0%
GTATACAGATGAACAGATTT+GGG - Chr3:54801184-54801203 MsG0380014433.01.T01:intron 30.0%
TATGGTTGTCTATGTTTCTT+TGG - Chr3:54798733-54798752 MsG0380014433.01.T01:CDS 30.0%
TCAAATAAGCCAATCGAAAT+AGG + Chr3:54800574-54800593 None:intergenic 30.0%
TCGTACATTGAAAAGTGAAA+AGG + Chr3:54799547-54799566 None:intergenic 30.0%
TGATTGGAATCCATGATTTA+CGG - Chr3:54801084-54801103 MsG0380014433.01.T01:CDS 30.0%
TTACTGAGAATGGAGAAAAT+TGG - Chr3:54802005-54802024 MsG0380014433.01.T01:intron 30.0%
TTCTTGCTCAAAACTTCTTA+TGG + Chr3:54799768-54799787 None:intergenic 30.0%
TTTATTTGTTTCCTTGGGTT+TGG - Chr3:54801865-54801884 MsG0380014433.01.T01:CDS 30.0%
! ACTATTTTCATAAGCTGTCT+TGG + Chr3:54800755-54800774 None:intergenic 30.0%
!! ATGAAGGTAACTTTTGAAAG+AGG + Chr3:54800287-54800306 None:intergenic 30.0%
!! GTCATATTAAGTGTCGTTTA+AGG - Chr3:54799408-54799427 MsG0380014433.01.T01:intron 30.0%
!! TATAGTATTGATTCCTGTCA+TGG - Chr3:54799352-54799371 MsG0380014433.01.T01:intron 30.0%
!!! CATTTTTCTGAAACGATTTC+TGG - Chr3:54799734-54799753 MsG0380014433.01.T01:intron 30.0%
AAATGGTATCAGAACCTATC+GGG - Chr3:54801538-54801557 MsG0380014433.01.T01:intron 35.0%
AACAGATTTGGGAGGTAATT+TGG - Chr3:54801195-54801214 MsG0380014433.01.T01:intron 35.0%
AACATCAACGTCTCATTGAT+TGG - Chr3:54801068-54801087 MsG0380014433.01.T01:CDS 35.0%
AACTAGTTGCAGAATACACA+AGG - Chr3:54802404-54802423 MsG0380014433.01.T01:CDS 35.0%
AATGGAGAAAATTGGAGCAT+GGG - Chr3:54802013-54802032 MsG0380014433.01.T01:intron 35.0%
AATGTTGTATAACTGGAGCT+TGG + Chr3:54799718-54799737 None:intergenic 35.0%
ACGACACTTAATATGACACA+AGG + Chr3:54799405-54799424 None:intergenic 35.0%
AGTTACCTTCAATGTTGTTC+AGG - Chr3:54799283-54799302 MsG0380014433.01.T01:intron 35.0%
ATGTCCTGCAAATGATTGTT+GGG - Chr3:54801911-54801930 MsG0380014433.01.T01:intron 35.0%
CAGTAATCAATATCGGTCAT+TGG + Chr3:54799051-54799070 None:intergenic 35.0%
CATCACGCAGTAATCAATAT+CGG + Chr3:54799058-54799077 None:intergenic 35.0%
CATTATGAGTAAGCCAATCT+TGG + Chr3:54800688-54800707 None:intergenic 35.0%
CATTGGATTTAGTCTCACAT+CGG - Chr3:54801647-54801666 MsG0380014433.01.T01:intron 35.0%
CCCATAATATGATATGTGAC+AGG - Chr3:54801776-54801795 MsG0380014433.01.T01:CDS 35.0%
CCCTGTCACATATCATATTA+TGG + Chr3:54801780-54801799 None:intergenic 35.0%
CTAACTCATCCATACAAAAC+CGG + Chr3:54801754-54801773 None:intergenic 35.0%
GAAATGGTATCAGAACCTAT+CGG - Chr3:54801537-54801556 MsG0380014433.01.T01:intron 35.0%
GAGAAGAGTTTATAAAGAGG+AGG - Chr3:54801685-54801704 MsG0380014433.01.T01:intron 35.0%
GCAGAAAGCAAATACTATTG+AGG + Chr3:54799897-54799916 None:intergenic 35.0%
GGTTCATATTCAGGATTTAC+AGG - Chr3:54800236-54800255 MsG0380014433.01.T01:intron 35.0%
GTCTATGTTTCTTTGGCAAT+TGG - Chr3:54798740-54798759 MsG0380014433.01.T01:CDS 35.0%
TATGTCCTGCAAATGATTGT+TGG - Chr3:54801910-54801929 MsG0380014433.01.T01:intron 35.0%
TCAATAACCATCATGAGTTC+TGG - Chr3:54801979-54801998 MsG0380014433.01.T01:intron 35.0%
TCATAATGGCCTATTTCGAT+TGG - Chr3:54800562-54800581 MsG0380014433.01.T01:intron 35.0%
TCGATATCAGTAAATGTGTC+AGG + Chr3:54798957-54798976 None:intergenic 35.0%
TCGCAACCTAAATTATACAG+TGG - Chr3:54799830-54799849 MsG0380014433.01.T01:intron 35.0%
TGAAGTGATTCTATGAGCAA+TGG + Chr3:54802188-54802207 None:intergenic 35.0%
TGATACCATTTCAGAATTCG+TGG + Chr3:54801529-54801548 None:intergenic 35.0%
TTCAATGTTGTTCAGGTCTT+GGG - Chr3:54799290-54799309 MsG0380014433.01.T01:intron 35.0%
TTCACCAAAGAAGTTGCTTA+AGG - Chr3:54802360-54802379 MsG0380014433.01.T01:CDS 35.0%
TTGTCCTTAAGCAACTTCTT+TGG + Chr3:54802367-54802386 None:intergenic 35.0%
TTGTGTGGTATTATTACTGC+AGG - Chr3:54799078-54799097 MsG0380014433.01.T01:CDS 35.0%
! ATCAAGATTTTTCCTGCAAC+AGG + Chr3:54801044-54801063 None:intergenic 35.0%
! ATGGTTCTGTTTCTTAGTGA+AGG - Chr3:54802223-54802242 MsG0380014433.01.T01:CDS 35.0%
! GTCAAACACATTTGATGACA+TGG + Chr3:54799508-54799527 None:intergenic 35.0%
!! AGACTGTTTTCGAGAGTTTA+CGG - Chr3:54800621-54800640 MsG0380014433.01.T01:intron 35.0%
!! ATTATAAGAGGTGCTTCACT+TGG + Chr3:54800174-54800193 None:intergenic 35.0%
!! CAAGATTGGCTTACTCATAA+TGG - Chr3:54800686-54800705 MsG0380014433.01.T01:intron 35.0%
!! TTATAAGAGGTGCTTCACTT+GGG + Chr3:54800173-54800192 None:intergenic 35.0%
AATTTGGTTACTTGGCGGTT+TGG - Chr3:54800101-54800120 MsG0380014433.01.T01:CDS 40.0%
ACCATTTCAGAATTCGTGGT+GGG + Chr3:54801525-54801544 None:intergenic 40.0%
ACTTCCCAACAATCATTTGC+AGG + Chr3:54801918-54801937 None:intergenic 40.0%
AGGATCCAACGATGTTTGAA+GGG - Chr3:54801129-54801148 MsG0380014433.01.T01:intron 40.0%
AGGCAATCAACATCTCATCT+TGG - Chr3:54799098-54799117 MsG0380014433.01.T01:CDS 40.0%
ATATGAACCTCTCCGAATGA+CGG + Chr3:54800225-54800244 None:intergenic 40.0%
ATGGAGAAAATTGGAGCATG+GGG - Chr3:54802014-54802033 MsG0380014433.01.T01:intron 40.0%
ATTATACAGTGGCAGTGCAA+TGG - Chr3:54799841-54799860 MsG0380014433.01.T01:intron 40.0%
ATTCGGAGAGGTTCATATTC+AGG - Chr3:54800227-54800246 MsG0380014433.01.T01:intron 40.0%
CAAGACCTGAACAACATTGA+AGG + Chr3:54799291-54799310 None:intergenic 40.0%
CTAGGATCAGCTATTGAACT+TGG + Chr3:54799942-54799961 None:intergenic 40.0%
CTTCAATGTTGTTCAGGTCT+TGG - Chr3:54799289-54799308 MsG0380014433.01.T01:intron 40.0%
GAATGGAGAAAATTGGAGCA+TGG - Chr3:54802012-54802031 MsG0380014433.01.T01:intron 40.0%
GAGTAGTATCGCTGCATATA+AGG + Chr3:54799658-54799677 None:intergenic 40.0%
GATGAAGTGAGGAAGAAAGA+AGG - Chr3:54801319-54801338 MsG0380014433.01.T01:intron 40.0%
GCACTGCCACTGTATAATTT+AGG + Chr3:54799839-54799858 None:intergenic 40.0%
GGAATGGCTGAAATTCAGAT+TGG - Chr3:54799862-54799881 MsG0380014433.01.T01:intron 40.0%
GTAACTCCCCATACTACATT+TGG + Chr3:54799269-54799288 None:intergenic 40.0%
GTAAGTCCACGTAAAACAAG+AGG + Chr3:54800927-54800946 None:intergenic 40.0%
TACACAAGGAGATCAAACAC+TGG - Chr3:54802418-54802437 MsG0380014433.01.T01:CDS 40.0%
TACAGATGAACAGATTTGGG+AGG - Chr3:54801187-54801206 MsG0380014433.01.T01:intron 40.0%
TACCATTTCAGAATTCGTGG+TGG + Chr3:54801526-54801545 None:intergenic 40.0%
TCAAGTGTCTATCATGGTAC+AGG - Chr3:54800881-54800900 MsG0380014433.01.T01:CDS 40.0%
TCATCTGTATACTCTTCGAG+CGG + Chr3:54801176-54801195 None:intergenic 40.0%
TGTTAGCAGTCAACACTCAT+TGG - Chr3:54801630-54801649 MsG0380014433.01.T01:intron 40.0%
TTAGTCTGGACCGTAAATCA+TGG + Chr3:54801097-54801116 None:intergenic 40.0%
TTTACTGGTGGAGTGAAAAC+TGG - Chr3:54800954-54800973 MsG0380014433.01.T01:CDS 40.0%
! AAGAATTCTTCCACTTGGTG+TGG + Chr3:54798888-54798907 None:intergenic 40.0%
! CTTACTTGCACTTTTACTGG+TGG - Chr3:54800942-54800961 MsG0380014433.01.T01:CDS 40.0%
! GGACTTACTTGCACTTTTAC+TGG - Chr3:54800939-54800958 MsG0380014433.01.T01:CDS 40.0%
! TCATTCCTTTCCAGGTATTG+CGG - Chr3:54800029-54800048 MsG0380014433.01.T01:CDS 40.0%
!! ATCGGTCATTGGTTTGAGAT+CGG + Chr3:54799040-54799059 None:intergenic 40.0%
!! CATTTGACTGAAGAGCATTG+TGG + Chr3:54798825-54798844 None:intergenic 40.0%
!! CGGTTTTGTATGGATGAGTT+AGG - Chr3:54801752-54801771 MsG0380014433.01.T01:CDS 40.0%
!!! AGGAGATCAAACACTGGTTT+TGG - Chr3:54802424-54802443 MsG0380014433.01.T01:CDS 40.0%
AACCTATCGGGTCTATCGTT+GGG - Chr3:54801550-54801569 MsG0380014433.01.T01:intron 45.0%
AAGCTGTCTTGGAGAGCTTA+CGG + Chr3:54800744-54800763 None:intergenic 45.0%
AATGACGGCCAAGAATGATC+GGG + Chr3:54800210-54800229 None:intergenic 45.0%
ACAATCCCTCCAGACTAAAC+TGG + Chr3:54801498-54801517 None:intergenic 45.0%
ACAGTCCCTTCAAACATCGT+TGG + Chr3:54801137-54801156 None:intergenic 45.0%
ACGACTTGAAGTCAAACCTG+TGG + Chr3:54801356-54801375 None:intergenic 45.0%
AGAACCAACCCGATCATTCT+TGG - Chr3:54800199-54800218 MsG0380014433.01.T01:CDS 45.0%
AGAATTGTTGAGCCTGTTGC+AGG - Chr3:54801029-54801048 MsG0380014433.01.T01:CDS 45.0%
AGCCAATCTTGGAGAGCTTA+CGG + Chr3:54800677-54800696 None:intergenic 45.0%
AGGGACTGTAAGAAGTAACC+TGG - Chr3:54801148-54801167 MsG0380014433.01.T01:intron 45.0%
CAAACATCGTTGGATCCTGA+GGG + Chr3:54801127-54801146 None:intergenic 45.0%
CAGACTAAGCATAATCCCTC+AGG - Chr3:54801109-54801128 MsG0380014433.01.T01:CDS 45.0%
CAGGATCCAACGATGTTTGA+AGG - Chr3:54801128-54801147 MsG0380014433.01.T01:intron 45.0%
CATATGCAAGTTGCCATGAC+AGG + Chr3:54799368-54799387 None:intergenic 45.0%
CATCTGTATACTCTTCGAGC+GGG + Chr3:54801175-54801194 None:intergenic 45.0%
CGTGAATTGGCACGATTAAC+TGG - Chr3:54799686-54799705 MsG0380014433.01.T01:intron 45.0%
CTCCTCACAGTTCAAAGAGT+AGG - Chr3:54801710-54801729 MsG0380014433.01.T01:CDS 45.0%
CTGAGGGATTATGCTTAGTC+TGG + Chr3:54801111-54801130 None:intergenic 45.0%
CTGTCATGGCAACTTGCATA+TGG - Chr3:54799366-54799385 MsG0380014433.01.T01:intron 45.0%
GAATGACGGCCAAGAATGAT+CGG + Chr3:54800211-54800230 None:intergenic 45.0%
GATCATTCTTGGCCGTCATT+CGG - Chr3:54800210-54800229 MsG0380014433.01.T01:intron 45.0%
GATTACTGCGTGATGTTGTG+TGG - Chr3:54799063-54799082 MsG0380014433.01.T01:CDS 45.0%
GCAACTGCAGAACCTGATAT+TGG - Chr3:54798698-54798717 MsG0380014433.01.T01:CDS 45.0%
GTAACTGCCAGAACTCATGA+TGG + Chr3:54801989-54802008 None:intergenic 45.0%
GTTCTGGCAGTTACTGAGAA+TGG - Chr3:54801995-54802014 MsG0380014433.01.T01:intron 45.0%
TACTCTGCATCAGCGTGAAT+TGG - Chr3:54799673-54799692 MsG0380014433.01.T01:intron 45.0%
TATCGCCAGTTTAGTCTGGA+GGG - Chr3:54801490-54801509 MsG0380014433.01.T01:intron 45.0%
TATGACACAAGGAGACTACC+TGG + Chr3:54799394-54799413 None:intergenic 45.0%
TATTCCTCAATAAGCCCTGC+AGG + Chr3:54802337-54802356 None:intergenic 45.0%
TCAAACATCGTTGGATCCTG+AGG + Chr3:54801128-54801147 None:intergenic 45.0%
TCCTCACTTCATCTCCAAGT+TGG + Chr3:54801312-54801331 None:intergenic 45.0%
TCTTAAGTAGAACACGTCCG+AGG + Chr3:54802057-54802076 None:intergenic 45.0%
TGCCTACTCTTTGAACTGTG+AGG + Chr3:54801715-54801734 None:intergenic 45.0%
TGGTCACCATCTCTAATGAG+TGG + Chr3:54801437-54801456 None:intergenic 45.0%
TTCCGTAAGCTCTCCAAGAT+TGG - Chr3:54800672-54800691 MsG0380014433.01.T01:intron 45.0%
TTCTTCATGCTGATCCTGCA+GGG - Chr3:54802320-54802339 MsG0380014433.01.T01:CDS 45.0%
TTTCTTCATGCTGATCCTGC+AGG - Chr3:54802319-54802338 MsG0380014433.01.T01:CDS 45.0%
! CATTCCTTTCCAGGTATTGC+GGG - Chr3:54800030-54800049 MsG0380014433.01.T01:CDS 45.0%
! CGTAAAACAAGAGGCATGTG+AGG + Chr3:54800918-54800937 None:intergenic 45.0%
! GCTCTAGATATGTGCCAACT+TGG - Chr3:54801295-54801314 MsG0380014433.01.T01:intron 45.0%
! GTGGCATCGAAAAACGACAT+TGG + Chr3:54798869-54798888 None:intergenic 45.0%
! GTTGTGCCACTCATTAGAGA+TGG - Chr3:54801428-54801447 MsG0380014433.01.T01:CDS 45.0%
!! CCATACAAAACCGGCTTGTA+CGG + Chr3:54801745-54801764 None:intergenic 45.0%
!! CTGCATATAAGGAAGCACTC+TGG + Chr3:54799647-54799666 None:intergenic 45.0%
!! TGACATGGCATTGACCTGAA+TGG + Chr3:54799493-54799512 None:intergenic 45.0%
!! TTGACTGAAGAGCATTGTGG+AGG + Chr3:54798822-54798841 None:intergenic 45.0%
!! TTTTTCGATGCCACACCAAG+TGG - Chr3:54798875-54798894 MsG0380014433.01.T01:CDS 45.0%
!!! CACATGCCTCTTGTTTTACG+TGG - Chr3:54800918-54800937 MsG0380014433.01.T01:CDS 45.0%
ACAGTGGCAGTGCAATGGAA+TGG - Chr3:54799846-54799865 MsG0380014433.01.T01:intron 50.0%
AGCAAGAACTGCTCTGCCAA+GGG + Chr3:54798780-54798799 None:intergenic 50.0%
AGGCAGGCTTATCAGCACAA+TGG + Chr3:54801457-54801476 None:intergenic 50.0%
ATCGTGGGAAGAACAGGAAG+TGG - Chr3:54800978-54800997 MsG0380014433.01.T01:CDS 50.0%
CAATCCCGCAATACCTGGAA+AGG + Chr3:54800037-54800056 None:intergenic 50.0%
CATACCATTGCACGCCATTC+AGG - Chr3:54799476-54799495 MsG0380014433.01.T01:intron 50.0%
CCAGACTAAACTGGCGATAG+AGG + Chr3:54801489-54801508 None:intergenic 50.0%
CCTCTATCGCCAGTTTAGTC+TGG - Chr3:54801486-54801505 MsG0380014433.01.T01:intron 50.0%
CTATCGCCAGTTTAGTCTGG+AGG - Chr3:54801489-54801508 MsG0380014433.01.T01:intron 50.0%
GAACCTATCGGGTCTATCGT+TGG - Chr3:54801549-54801568 MsG0380014433.01.T01:intron 50.0%
GAAGGAAAGCTTGACTCCAC+AGG - Chr3:54801337-54801356 MsG0380014433.01.T01:intron 50.0%
GAGGGCTCAAGTGTCTATCA+TGG - Chr3:54800875-54800894 MsG0380014433.01.T01:CDS 50.0%
GCAGTTCTTGCTGCAATAGC+TGG - Chr3:54798788-54798807 MsG0380014433.01.T01:CDS 50.0%
GCCAACTTGGAGATGAAGTG+AGG - Chr3:54801308-54801327 MsG0380014433.01.T01:intron 50.0%
GCTGATAAGCCTGCCTCTTT+CGG - Chr3:54801461-54801480 MsG0380014433.01.T01:intron 50.0%
GGAGTGAAAACTGGCATCGT+GGG - Chr3:54800963-54800982 MsG0380014433.01.T01:CDS 50.0%
GGCAACTTGCATATGGTACC+AGG - Chr3:54799373-54799392 MsG0380014433.01.T01:intron 50.0%
TGATCCTGCAGGGCTTATTG+AGG - Chr3:54802330-54802349 MsG0380014433.01.T01:CDS 50.0%
TGGAGTGAAAACTGGCATCG+TGG - Chr3:54800962-54800981 MsG0380014433.01.T01:CDS 50.0%
TTCAATCCTCGACAGCGACA+TGG - Chr3:54802204-54802223 MsG0380014433.01.T01:intron 50.0%
TTGACCTGAATGGCGTGCAA+TGG + Chr3:54799483-54799502 None:intergenic 50.0%
! CAAAGACAGTTGGTCTGCCT+CGG - Chr3:54802037-54802056 MsG0380014433.01.T01:intron 50.0%
! CTGTGATGTCTCAAGTTGCG+TGG - Chr3:54799321-54799340 MsG0380014433.01.T01:intron 50.0%
! CTTTCCAGGTATTGCGGGAT+TGG - Chr3:54800035-54800054 MsG0380014433.01.T01:CDS 50.0%
! GCCCACCACGAATTCTGAAA+TGG - Chr3:54801521-54801540 MsG0380014433.01.T01:intron 50.0%
! GGCTTTGGCAACTCCTGTTT+CGG - Chr3:54798676-54798695 MsG0380014433.01.T01:CDS 50.0%
!! AAGAGGTGCTTCACTTGGGA+TGG + Chr3:54800169-54800188 None:intergenic 50.0%
!! ATAGAGGTACCGAAAGAGGC+AGG + Chr3:54801473-54801492 None:intergenic 50.0%
!! CCGTACAAGCCGGTTTTGTA+TGG - Chr3:54801742-54801761 MsG0380014433.01.T01:CDS 50.0%
!! CGGGATTGGCTGTGACATAT+GGG - Chr3:54800049-54800068 MsG0380014433.01.T01:CDS 50.0%
AAGAACTGCTCTGCCAAGGG+TGG + Chr3:54798777-54798796 None:intergenic 55.0%
ACAGAACCATGTCGCTGTCG+AGG + Chr3:54802213-54802232 None:intergenic 55.0%
ACAGCCAATCCCGCAATACC+TGG + Chr3:54800042-54800061 None:intergenic 55.0%
ACGGCCAAGAATGATCGGGT+TGG + Chr3:54800206-54800225 None:intergenic 55.0%
ACTGGCATCGTGGGAAGAAC+AGG - Chr3:54800972-54800991 MsG0380014433.01.T01:CDS 55.0%
AGCCCAACGATAGACCCGAT+AGG + Chr3:54801555-54801574 None:intergenic 55.0%
AGGTGCTTCACTTGGGATGG+AGG + Chr3:54800166-54800185 None:intergenic 55.0%
CAGCAAGAACTGCTCTGCCA+AGG + Chr3:54798781-54798800 None:intergenic 55.0%
GAGCATGGGGCAAAGACAGT+TGG - Chr3:54802027-54802046 MsG0380014433.01.T01:intron 55.0%
GCACTTCTCACCGTACAAGC+CGG - Chr3:54801732-54801751 MsG0380014433.01.T01:CDS 55.0%
GGAAGTTCGTTTGCCACCCT+TGG - Chr3:54798761-54798780 MsG0380014433.01.T01:CDS 55.0%
GGTTCTGCAGTTGCCGAAAC+AGG + Chr3:54798692-54798711 None:intergenic 55.0%
TATACTCTTCGAGCGGGTCC+AGG + Chr3:54801169-54801188 None:intergenic 55.0%
TCCTGCATTGTCCACGCTTC+AGG - Chr3:54801575-54801594 MsG0380014433.01.T01:intron 55.0%
TTCTTGGCCGTCATTCGGAG+AGG - Chr3:54800215-54800234 MsG0380014433.01.T01:intron 55.0%
! GATGTCTCAAGTTGCGTGGC+AGG - Chr3:54799325-54799344 MsG0380014433.01.T01:intron 55.0%
!! GCGGGATTGGCTGTGACATA+TGG - Chr3:54800048-54800067 MsG0380014433.01.T01:CDS 55.0%
!! GGCGATAGAGGTACCGAAAG+AGG + Chr3:54801477-54801496 None:intergenic 55.0%
GCCTGAAGCGTGGACAATGC+AGG + Chr3:54801579-54801598 None:intergenic 60.0%
GTCCACGCTTCAGGCCCGTT+GGG - Chr3:54801584-54801603 MsG0380014433.01.T01:intron 65.0%
TGTCCACGCTTCAGGCCCGT+TGG - Chr3:54801583-54801602 MsG0380014433.01.T01:intron 65.0%
ACGCTTCAGCCCGGCCCAAC+GGG + Chr3:54801601-54801620 None:intergenic 70.0%
ACGCTTCAGGCCCGTTGGGC+CGG - Chr3:54801588-54801607 MsG0380014433.01.T01:intron 70.0%
CACCCCCTCACGCTTCAGCC+CGG + Chr3:54801610-54801629 None:intergenic 70.0%
CACGCTTCAGCCCGGCCCAA+CGG + Chr3:54801602-54801621 None:intergenic 70.0%
TGGGCCGGGCTGAAGCGTGA+GGG - Chr3:54801603-54801622 MsG0380014433.01.T01:intron 70.0%
TTGGGCCGGGCTGAAGCGTG+AGG - Chr3:54801602-54801621 MsG0380014433.01.T01:intron 70.0%
CGCTTCAGGCCCGTTGGGCC+GGG - Chr3:54801589-54801608 MsG0380014433.01.T01:intron 75.0%
GGCCCAACGGGCCTGAAGCG+TGG + Chr3:54801589-54801608 None:intergenic 75.0%
GGCCGGGCTGAAGCGTGAGG+GGG - Chr3:54801605-54801624 MsG0380014433.01.T01:intron 75.0%
GGGCCGGGCTGAAGCGTGAG+GGG - Chr3:54801604-54801623 MsG0380014433.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 54798674 54802453 54798674 ID=MsG0380014433.01;Name=MsG0380014433.01
Chr3 mRNA 54798674 54802453 54798674 ID=MsG0380014433.01.T01;Parent=MsG0380014433.01;Name=MsG0380014433.01.T01;_AED=0.33;_eAED=0.33;_QI=0|0|0|1|0.66|0.57|7|0|519
Chr3 exon 54802214 54802453 54802214 ID=MsG0380014433.01.T01:exon:10178;Parent=MsG0380014433.01.T01
Chr3 exon 54801698 54801897 54801698 ID=MsG0380014433.01.T01:exon:10177;Parent=MsG0380014433.01.T01
Chr3 exon 54801420 54801460 54801420 ID=MsG0380014433.01.T01:exon:10176;Parent=MsG0380014433.01.T01
Chr3 exon 54800870 54801129 54800870 ID=MsG0380014433.01.T01:exon:10175;Parent=MsG0380014433.01.T01
Chr3 exon 54799919 54800224 54799919 ID=MsG0380014433.01.T01:exon:10174;Parent=MsG0380014433.01.T01
Chr3 exon 54799769 54799832 54799769 ID=MsG0380014433.01.T01:exon:10173;Parent=MsG0380014433.01.T01
Chr3 exon 54798674 54799122 54798674 ID=MsG0380014433.01.T01:exon:10172;Parent=MsG0380014433.01.T01
Chr3 CDS 54802214 54802453 54802214 ID=MsG0380014433.01.T01:cds;Parent=MsG0380014433.01.T01
Chr3 CDS 54801698 54801897 54801698 ID=MsG0380014433.01.T01:cds;Parent=MsG0380014433.01.T01
Chr3 CDS 54801420 54801460 54801420 ID=MsG0380014433.01.T01:cds;Parent=MsG0380014433.01.T01
Chr3 CDS 54800870 54801129 54800870 ID=MsG0380014433.01.T01:cds;Parent=MsG0380014433.01.T01
Chr3 CDS 54799919 54800224 54799919 ID=MsG0380014433.01.T01:cds;Parent=MsG0380014433.01.T01
Chr3 CDS 54799769 54799832 54799769 ID=MsG0380014433.01.T01:cds;Parent=MsG0380014433.01.T01
Chr3 CDS 54798674 54799122 54798674 ID=MsG0380014433.01.T01:cds;Parent=MsG0380014433.01.T01
Gene Sequence

>MsG0380014433.01.T01

ATGGCTTTGGCAACTCCTGTTTCGGCAACTGCAGAACCTGATATTGGAAATCTTACTCTTATGGTTGTCTATGTTTCTTTGGCAATTGGAAGTTCGTTTGCCACCCTTGGCAGAGCAGTTCTTGCTGCAATAGCTGGATACAAGACCTCCACAATGCTCTTCAGTCAAATGCATTTGAGCTTTATTCGAGCACCAATGTCGTTTTTCGATGCCACACCAAGTGGAAGAATTCTTAATAGAGCTTCAACAGACCAAAGTTTTGTAGATATAAACATTCCAAATGTAGTATGGGGAGTTACCTTCAATGTTGTTCAGGTCTTGGGAACTGTTGCTGTGATGTCTCAAGTTGCGTGGCAGGTCTTTATAGTATTGATTCCTGTCATGGCAACTTGCATATGGTACCAGGTAGTCTCCTTGTGTCATATTAAGTGTCGTTTAAGCGATACTACTCTGCATCAGCGTGAATTGGCACGATTAACTGTCATACTCGCTCATTGTTACATTATAAAACTTCATTCCTTTCCAGGTATTGCGGGATTGGCTGTGACATATGGGATTAACCTAAATGCTGTACAAAATAATTTAATTTGGTTACTTGGCGGTTTGGAGAACAAAATTATATCTGTAGAAAGAATACTTCAGTACACCTCCATCCCAAGTGAAGCACCTCTTATAATAAAAGAGAACCAACCCGATCATTCTTGGCCGTCATTCGGAGAGGTTCATATTCAGGATTTACAGGTTCAATACGCTCCTCACATGCCTCTTGTTTTACGTGGACTTACTTGCACTTTTACTGGTGGAGTGAAAACTGGCATCGTGGGAAGAACAGGAAGTGGAAAATCAACACTAGTGCAAGCACTTTTCAGAATTGTTGAGCCTGTTGCAGGAAAAATCTTGATAGACAACATCAACGTCTCATTGATTGGAATCCATGATTTACGGTCCAGACTAAGCATAATCCCTCAGGATCCAACGATGTTTGAAGGGACTGTAAGAAGTAACCTGGACCCGCTCGAAGAGTATACAGATGAACAGATTTGGGAGGCTCTAGATATGTGCCAACTTGGAGATGAAGTGAGGAAGAAAGAAGGAAAGCTTGACTCCACAGTTACTGAGAATGGAGAAAATTGGAGCATGGGGCAAAGACAGTTGGTCTGCCTCGGACGTGTTCTACTTAAGAAAAGCAAGATCTTGGTGCTTGATGAAGCTACTGCATCAGTTGATACAGCAACAGATAATATTATTCAGCAAACAGTTAAGCAACATTTCTCAGATTGCACAGTCATTACCATTGCTCATAGAATCACTTCAATCCTCGACAGCGACATGGTTCTGTTTCTTAGTGAAGGCAAGAATCTGTTTTATTTCCCCCTTCTTTATTTGTCACAATTTAATGTTTTCTTATTAAATCTGAACATGATTTTTCTTCATGCTGATCCTGCAGGGCTTATTGAGGAATATGATTCACCAAAGAAGTTGCTTAAGGACAAATCTTCATCTCTTGCTCAACTAGTTGCAGAATACACAAGGAGATCAAACACTGGTTTTGGAAGTTGA

Protein sequence

>MsG0380014433.01.T01

MALATPVSATAEPDIGNLTLMVVYVSLAIGSSFATLGRAVLAAIAGYKTSTMLFSQMHLSFIRAPMSFFDATPSGRILNRASTDQSFVDINIPNVVWGVTFNVVQVLGTVAVMSQVAWQVFIVLIPVMATCIWYQVVSLCHIKCRLSDTTLHQRELARLTVILAHCYIIKLHSFPGIAGLAVTYGINLNAVQNNLIWLLGGLENKIISVERILQYTSIPSEAPLIIKENQPDHSWPSFGEVHIQDLQVQYAPHMPLVLRGLTCTFTGGVKTGIVGRTGSGKSTLVQALFRIVEPVAGKILIDNINVSLIGIHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALDMCQLGDEVRKKEGKLDSTVTENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNIIQQTVKQHFSDCTVITIAHRITSILDSDMVLFLSEGKNLFYFPLLYLSQFNVFLLNLNMIFLHADPAGLIEEYDSPKKLLKDKSSSLAQLVAEYTRRSNTGFGS*