AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014466.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014466.01.T01 MTR_3g058400 91.694 301 25 0 1 301 1 301 0.0 573
MsG0380014466.01.T01 MTR_3g058220 78.738 301 63 1 1 301 1 300 5.06e-176 496
MsG0380014466.01.T01 MTR_3g058250 73.510 302 77 2 1 301 1 300 5.57e-159 453
MsG0380014466.01.T01 MTR_0554s0020 70.764 301 88 0 1 301 1 301 1.04e-152 437
MsG0380014466.01.T01 MTR_3g058390 70.861 302 85 2 1 301 1 300 2.24e-152 436
MsG0380014466.01.T01 MTR_3g058210 72.852 291 78 1 12 301 12 302 1.40e-151 434
MsG0380014466.01.T01 MTR_6g462640 66.225 302 99 2 1 301 1 300 3.94e-144 416
MsG0380014466.01.T01 MTR_3g058240 71.053 266 76 1 37 301 1 266 6.19e-138 399
MsG0380014466.01.T01 MTR_3g058380 82.727 220 38 0 82 301 1 220 4.77e-132 382
MsG0380014466.01.T01 MTR_1g035140 56.766 303 126 3 1 301 1 300 2.42e-114 340
MsG0380014466.01.T01 MTR_3g057980 55.776 303 124 5 1 301 1 295 9.02e-113 335
MsG0380014466.01.T01 MTR_3g058060 55.592 304 131 3 1 301 1 303 9.01e-112 336
MsG0380014466.01.T01 MTR_1g442730 56.655 293 124 2 11 301 8 299 1.79e-111 332
MsG0380014466.01.T01 MTR_1g035190 56.786 280 118 2 24 301 7 285 3.32e-111 331
MsG0380014466.01.T01 MTR_3g058000 53.618 304 138 2 1 301 1 304 3.38e-111 332
MsG0380014466.01.T01 MTR_3g058230 69.565 230 66 2 73 301 1 227 5.18e-110 326
MsG0380014466.01.T01 MTR_3g057900 54.455 303 128 4 1 301 1 295 9.29e-110 328
MsG0380014466.01.T01 MTR_3g057970 54.636 302 123 5 1 301 1 289 7.80e-108 322
MsG0380014466.01.T01 MTR_3g058110 51.645 304 144 3 1 301 1 304 1.83e-102 309
MsG0380014466.01.T01 MTR_8g466180 50.825 303 144 3 1 301 1 300 3.92e-102 308
MsG0380014466.01.T01 MTR_0059s0170 49.835 303 148 3 1 301 1 301 1.26e-100 305
MsG0380014466.01.T01 MTR_6g039630 52.874 261 120 1 1 261 1 258 6.81e-95 282
MsG0380014466.01.T01 MTR_3g057800 49.811 265 131 2 37 301 36 298 3.44e-89 275
MsG0380014466.01.T01 MTR_5g094550 47.797 295 146 4 8 300 10 298 1.42e-88 273
MsG0380014466.01.T01 MTR_5g094660 50.000 270 129 2 32 300 33 297 4.38e-88 272
MsG0380014466.01.T01 MTR_5g094560 46.441 295 150 4 8 300 10 298 2.69e-87 270
MsG0380014466.01.T01 MTR_3g057860 46.801 297 152 4 6 300 8 300 5.58e-87 270
MsG0380014466.01.T01 MTR_5g019010 45.085 295 157 3 10 300 8 301 7.50e-86 266
MsG0380014466.01.T01 MTR_5g094840 46.488 299 152 3 7 301 11 305 7.21e-85 264
MsG0380014466.01.T01 MTR_5g095290 43.408 311 163 3 1 305 1 304 8.87e-85 263
MsG0380014466.01.T01 MTR_4g133750 47.079 291 146 4 13 300 12 297 1.63e-84 263
MsG0380014466.01.T01 MTR_5g094520 46.552 290 148 3 13 300 45 329 2.15e-84 263
MsG0380014466.01.T01 MTR_5g073250 45.973 298 148 5 7 301 12 299 2.60e-84 262
MsG0380014466.01.T01 MTR_5g018980 46.831 284 144 3 25 301 22 305 1.05e-83 261
MsG0380014466.01.T01 MTR_2g010530 47.292 277 141 2 24 300 21 292 1.43e-82 258
MsG0380014466.01.T01 MTR_5g094540 44.746 295 155 4 8 300 10 298 5.60e-82 256
MsG0380014466.01.T01 MTR_5g094570 46.102 295 151 4 8 300 10 298 6.65e-82 256
MsG0380014466.01.T01 MTR_5g018990 43.607 305 164 4 1 300 1 302 7.22e-82 256
MsG0380014466.01.T01 MTR_5g095260 45.675 289 143 4 24 305 24 305 1.29e-81 255
MsG0380014466.01.T01 MTR_5g073320 45.985 274 140 3 31 301 32 300 7.15e-79 248
MsG0380014466.01.T01 MTR_4g048580 43.390 295 159 4 8 300 10 298 6.48e-78 246
MsG0380014466.01.T01 MTR_3g057910 45.848 277 148 2 26 301 27 302 8.15e-78 246
MsG0380014466.01.T01 MTR_6g035115 45.487 277 146 2 24 300 24 295 2.48e-77 244
MsG0380014466.01.T01 MTR_6g035100 45.361 291 148 4 13 300 12 294 1.90e-75 239
MsG0380014466.01.T01 MTR_5g073230 43.369 279 135 5 26 301 30 288 1.99e-71 229
MsG0380014466.01.T01 MTR_5g095220 42.143 280 135 3 21 296 8 264 2.79e-71 228
MsG0380014466.01.T01 MTR_6g034965 40.068 292 162 6 13 300 12 294 2.48e-68 221
MsG0380014466.01.T01 MTR_3g076530 40.067 297 164 4 10 301 15 302 8.38e-66 214
MsG0380014466.01.T01 MTR_5g094535 45.701 221 102 2 13 232 14 217 2.47e-64 202
MsG0380014466.01.T01 MTR_5g094520 44.978 229 120 2 73 300 1 224 1.47e-62 204
MsG0380014466.01.T01 MTR_5g070850 36.452 310 175 8 5 305 10 306 8.28e-57 191
MsG0380014466.01.T01 MTR_3g057990 37.868 272 112 4 1 272 1 215 2.09e-56 182
MsG0380014466.01.T01 MTR_4g089030 39.114 271 159 3 36 301 47 316 3.38e-56 190
MsG0380014466.01.T01 MTR_2g065360 36.364 275 163 5 37 305 7 275 2.49e-54 184
MsG0380014466.01.T01 MTR_4g089020 36.727 275 170 4 28 301 21 292 2.81e-53 181
MsG0380014466.01.T01 MTR_3g076560 35.410 305 179 5 3 301 22 314 1.76e-52 180
MsG0380014466.01.T01 MTR_5g070920 38.511 309 167 8 7 306 12 306 3.86e-52 179
MsG0380014466.01.T01 MTR_1g023730 33.793 290 176 4 27 301 22 310 4.57e-52 179
MsG0380014466.01.T01 MTR_4g071710 38.214 280 152 8 38 301 38 312 4.91e-52 179
MsG0380014466.01.T01 MTR_5g470730 36.570 309 172 8 7 305 12 306 5.60e-52 176
MsG0380014466.01.T01 MTR_8g091690 33.553 304 180 6 5 301 1 289 1.02e-51 177
MsG0380014466.01.T01 MTR_4g089055 38.577 267 160 4 36 301 51 314 1.41e-51 177
MsG0380014466.01.T01 MTR_0022s0290 35.621 306 182 5 10 301 11 315 1.74e-51 177
MsG0380014466.01.T01 MTR_8g076290 36.364 286 162 8 27 301 28 304 1.78e-51 177
MsG0380014466.01.T01 MTR_5g070710 36.275 306 167 8 7 301 11 299 3.28e-51 176
MsG0380014466.01.T01 MTR_1g023720 32.166 314 194 5 3 301 1 310 4.64e-51 176
MsG0380014466.01.T01 MTR_5g070690 35.806 310 177 8 5 305 8 304 4.80e-51 176
MsG0380014466.01.T01 MTR_5g070800 35.806 310 177 8 5 305 8 304 4.80e-51 176
MsG0380014466.01.T01 MTR_1g023700 32.770 296 171 4 27 301 23 311 6.01e-51 176
MsG0380014466.01.T01 MTR_4g104610 35.354 297 178 5 14 301 9 300 2.37e-50 174
MsG0380014466.01.T01 MTR_4g104550 34.643 280 174 4 26 301 17 291 2.55e-49 171
MsG0380014466.01.T01 MTR_5g021390 32.468 308 183 7 5 301 19 312 8.25e-49 170
MsG0380014466.01.T01 MTR_3g076550 34.884 301 148 6 7 301 45 303 1.03e-48 169
MsG0380014466.01.T01 MTR_4g104640 37.544 285 164 8 24 300 37 315 1.18e-48 170
MsG0380014466.01.T01 MTR_5g070700 37.500 304 168 8 7 301 12 302 1.80e-48 169
MsG0380014466.01.T01 MTR_5g073240 57.143 133 56 1 16 147 61 193 3.02e-48 160
MsG0380014466.01.T01 MTR_4g089025 36.803 269 165 4 36 301 51 317 3.24e-48 169
MsG0380014466.01.T01 MTR_5g094460 42.574 202 86 3 33 232 25 198 3.89e-48 165
MsG0380014466.01.T01 MTR_6g084770 32.890 301 183 8 11 301 12 303 6.70e-46 162
MsG0380014466.01.T01 MTR_8g020940 32.680 306 192 5 3 299 1 301 4.79e-45 160
MsG0380014466.01.T01 MTR_4g025950 33.333 273 169 4 38 302 30 297 9.34e-44 152
MsG0380014466.01.T01 MTR_4g104660 34.459 296 184 8 12 300 19 311 1.48e-43 156
MsG0380014466.01.T01 MTR_4g026050 32.616 279 178 3 28 300 20 294 2.15e-43 155
MsG0380014466.01.T01 MTR_7g012330 30.935 278 183 3 30 301 27 301 2.50e-43 155
MsG0380014466.01.T01 MTR_5g070980 40.529 227 124 4 7 231 12 229 2.66e-43 148
MsG0380014466.01.T01 MTR_5g023680 35.055 271 166 3 37 301 5 271 3.09e-43 154
MsG0380014466.01.T01 MTR_5g045770 33.210 271 169 4 38 301 30 295 1.16e-42 153
MsG0380014466.01.T01 MTR_0171s0020 30.032 313 200 8 1 301 1 306 4.44e-42 152
MsG0380014466.01.T01 MTR_5g094670 38.462 221 90 4 10 229 16 191 6.77e-42 146
MsG0380014466.01.T01 MTR_7g012860 30.797 276 182 3 32 301 28 300 9.52e-42 151
MsG0380014466.01.T01 MTR_0287s0060 30.797 276 182 3 32 301 28 300 9.52e-42 151
MsG0380014466.01.T01 MTR_3g025260 32.680 306 178 8 12 301 8 301 1.03e-41 151
MsG0380014466.01.T01 MTR_4g133760 38.034 234 105 4 73 303 1 197 1.19e-41 148
MsG0380014466.01.T01 MTR_4g025970 33.456 272 168 4 38 301 30 296 1.27e-41 150
MsG0380014466.01.T01 MTR_8g020950 32.967 273 170 4 35 299 36 303 5.16e-41 149
MsG0380014466.01.T01 MTR_4g026070 31.148 305 198 4 8 306 2 300 1.76e-40 143
MsG0380014466.01.T01 MTR_3g436390 32.491 277 171 9 32 301 31 298 2.10e-40 147
MsG0380014466.01.T01 MTR_4g025980 32.601 273 167 5 38 301 31 295 2.86e-40 147
MsG0380014466.01.T01 MTR_8g104080 37.766 188 114 2 38 223 37 223 4.30e-40 142
MsG0380014466.01.T01 MTR_4g026200 32.982 285 181 3 28 306 20 300 4.31e-40 146
MsG0380014466.01.T01 MTR_7g087520 32.143 280 176 7 32 300 32 308 3.28e-39 144
MsG0380014466.01.T01 MTR_3g020780 31.046 306 193 7 6 301 10 307 3.68e-39 144
MsG0380014466.01.T01 MTR_3g077460 33.080 263 137 5 41 301 11 236 7.83e-39 141
MsG0380014466.01.T01 MTR_3g436540 31.752 274 170 7 37 301 40 305 8.42e-39 143
MsG0380014466.01.T01 MTR_4g104540 35.470 234 142 4 73 301 1 230 1.01e-38 141
MsG0380014466.01.T01 MTR_5g016410 31.290 310 178 10 11 305 12 301 7.84e-38 140
MsG0380014466.01.T01 MTR_8g020960 29.703 303 192 6 7 299 11 302 1.27e-37 140
MsG0380014466.01.T01 MTR_0181s0030 27.632 304 208 6 4 301 3 300 1.57e-37 139
MsG0380014466.01.T01 MTR_7g056103 33.803 284 172 9 28 301 25 302 2.28e-37 139
MsG0380014466.01.T01 MTR_5g072980 31.618 272 176 4 37 301 33 301 2.39e-37 139
MsG0380014466.01.T01 MTR_5g072930 31.618 272 176 4 37 301 33 301 2.39e-37 139
MsG0380014466.01.T01 MTR_7g092620 30.712 267 160 7 5 260 9 261 3.27e-37 139
MsG0380014466.01.T01 MTR_4g109470 30.970 268 164 5 46 301 40 298 2.57e-36 136
MsG0380014466.01.T01 MTR_5g073020 30.147 272 180 4 37 301 33 301 1.25e-35 134
MsG0380014466.01.T01 MTR_4g062500 29.455 275 181 5 38 301 36 308 1.70e-35 134
MsG0380014466.01.T01 MTR_3g025230 32.692 312 181 10 6 301 3 301 2.48e-35 134
MsG0380014466.01.T01 MTR_4g471620 40.526 190 102 5 14 198 15 198 2.87e-35 127
MsG0380014466.01.T01 MTR_3g024520 32.372 312 182 10 6 301 3 301 3.82e-35 133
MsG0380014466.01.T01 MTR_4g102310 29.371 286 187 6 28 305 30 308 8.02e-35 132
MsG0380014466.01.T01 MTR_1g097240 29.562 274 181 7 36 301 26 295 2.74e-34 130
MsG0380014466.01.T01 MTR_5g016440 30.038 263 166 7 3 255 1 255 3.74e-34 130
MsG0380014466.01.T01 MTR_7g103450 28.671 286 180 8 15 288 28 301 7.98e-34 129
MsG0380014466.01.T01 MTR_6g008620 27.760 317 206 8 8 305 14 326 1.36e-32 126
MsG0380014466.01.T01 MTR_4g094775 29.653 317 184 12 7 305 6 301 1.96e-32 125
MsG0380014466.01.T01 MTR_6g008500 26.488 336 204 7 2 305 12 336 2.13e-32 125
MsG0380014466.01.T01 MTR_7g092600 29.667 300 196 6 10 301 11 303 2.86e-32 125
MsG0380014466.01.T01 MTR_1g107305 27.985 268 178 5 48 302 49 314 4.45e-32 122
MsG0380014466.01.T01 MTR_4g095050 30.208 288 171 8 36 305 30 305 5.43e-32 124
MsG0380014466.01.T01 MTR_1g031700 30.466 279 180 6 29 301 26 296 1.71e-31 123
MsG0380014466.01.T01 MTR_0171s0010 27.476 313 210 8 1 301 1 308 1.82e-31 123
MsG0380014466.01.T01 MTR_1g103670 30.686 277 174 8 31 299 28 294 2.13e-31 122
MsG0380014466.01.T01 MTR_4g094772 32.000 250 155 7 15 260 19 257 2.45e-31 122
MsG0380014466.01.T01 MTR_4g062510 27.509 269 176 6 48 301 48 312 2.97e-31 122
MsG0380014466.01.T01 MTR_5g007450 26.950 282 193 6 7 283 9 282 8.22e-31 121
MsG0380014466.01.T01 MTR_8g469300 29.104 268 167 7 48 301 46 304 9.56e-31 121
MsG0380014466.01.T01 MTR_1g107295 28.090 267 177 5 48 301 49 313 1.84e-30 120
MsG0380014466.01.T01 MTR_6g042610 26.882 279 185 5 45 305 42 319 3.29e-30 119
MsG0380014466.01.T01 MTR_5g007550 27.046 281 192 6 8 283 10 282 4.35e-30 119
MsG0380014466.01.T01 MTR_0638s0020 28.938 273 143 7 37 305 7 232 9.62e-30 117
MsG0380014466.01.T01 MTR_7g027960 28.159 277 178 8 36 301 30 296 1.15e-29 118
MsG0380014466.01.T01 MTR_7g028020 28.159 277 178 8 36 301 30 296 2.00e-29 117
MsG0380014466.01.T01 MTR_4g088425 29.084 251 166 4 38 283 40 283 2.63e-29 117
MsG0380014466.01.T01 MTR_4g018800 29.433 282 176 8 45 305 47 326 4.66e-29 116
MsG0380014466.01.T01 MTR_0608s0010 30.435 276 170 6 29 301 26 282 1.18e-28 113
MsG0380014466.01.T01 MTR_2g437840 29.167 312 192 8 8 305 5 301 1.22e-28 115
MsG0380014466.01.T01 MTR_5g018480 28.516 256 166 6 38 279 41 293 1.42e-28 112
MsG0380014466.01.T01 MTR_6g008530 28.037 321 195 10 5 302 20 327 1.64e-28 115
MsG0380014466.01.T01 MTR_5g094790 35.122 205 88 5 95 297 1 162 2.15e-28 109
MsG0380014466.01.T01 MTR_6g042540 27.551 294 193 6 30 305 27 318 2.19e-28 114
MsG0380014466.01.T01 MTR_8g036185 28.839 267 176 5 47 301 44 308 2.25e-28 114
MsG0380014466.01.T01 MTR_8g046210 27.869 305 200 9 7 301 11 305 6.06e-28 113
MsG0380014466.01.T01 MTR_6g008650 27.798 277 179 6 45 301 47 322 6.41e-28 113
MsG0380014466.01.T01 MTR_4g062530 27.099 262 175 7 46 301 44 295 1.04e-27 112
MsG0380014466.01.T01 MTR_5g007460 26.199 271 180 8 30 289 4 265 1.97e-27 111
MsG0380014466.01.T01 MTR_1g055325 27.797 295 194 7 5 293 30 311 1.99e-27 111
MsG0380014466.01.T01 MTR_4g102280 26.336 262 182 4 52 305 56 314 2.61e-27 111
MsG0380014466.01.T01 MTR_1g103680 27.106 273 185 6 31 297 29 293 2.90e-27 111
MsG0380014466.01.T01 MTR_4g088400 26.437 261 170 6 38 283 47 300 3.33e-27 111
MsG0380014466.01.T01 MTR_6g008600 25.559 313 209 6 11 302 16 325 6.12e-27 110
MsG0380014466.01.T01 MTR_8g468780 29.167 240 154 6 73 301 1 235 1.18e-26 108
MsG0380014466.01.T01 MTR_3g014880 28.470 281 179 7 45 304 47 326 2.98e-26 108
MsG0380014466.01.T01 MTR_2g073420 26.280 293 200 6 12 293 14 301 8.56e-26 107
MsG0380014466.01.T01 MTR_8g012585 29.961 257 161 7 65 306 1 253 1.13e-25 106
MsG0380014466.01.T01 MTR_8g046240 29.707 239 158 6 5 236 9 244 1.78e-25 106
MsG0380014466.01.T01 MTR_4g088415 26.523 279 184 6 38 301 45 317 2.33e-25 104
MsG0380014466.01.T01 MTR_4g035330 30.315 254 158 9 17 264 18 258 2.39e-25 105
MsG0380014466.01.T01 MTR_6g008640 29.032 279 177 6 45 304 47 323 3.19e-25 105
MsG0380014466.01.T01 MTR_6g008430 26.667 300 185 9 3 284 16 298 4.59e-25 105
MsG0380014466.01.T01 MTR_8g012590 28.016 257 162 6 21 266 26 270 2.29e-24 103
MsG0380014466.01.T01 MTR_1g116890 25.723 311 187 11 14 301 16 305 4.58e-24 102
MsG0380014466.01.T01 MTR_7g075610 29.126 206 137 4 26 223 23 227 5.39e-24 102
MsG0380014466.01.T01 MTR_6g022450 25.402 311 196 9 15 301 15 313 1.10e-23 101
MsG0380014466.01.T01 MTR_2g450040 25.455 275 186 6 45 304 46 316 1.36e-23 100
MsG0380014466.01.T01 MTR_4g077210 28.571 273 170 9 47 305 45 306 2.35e-23 100
MsG0380014466.01.T01 MTR_3g465300 27.586 319 199 10 5 305 21 325 1.24e-22 98.2
MsG0380014466.01.T01 MTR_3g467220 25.552 317 208 10 6 305 18 323 1.60e-22 97.8
MsG0380014466.01.T01 MTR_5g070685 42.105 114 55 2 3 116 14 116 1.98e-22 90.5
MsG0380014466.01.T01 MTR_7g075390 28.155 206 139 3 26 223 23 227 3.57e-22 96.7
MsG0380014466.01.T01 MTR_4g088170 23.826 298 212 7 13 301 8 299 2.04e-21 94.7
MsG0380014466.01.T01 MTR_2g073440 28.723 188 126 3 12 192 3 189 3.81e-21 93.6
MsG0380014466.01.T01 MTR_4g088160 23.843 281 199 7 30 301 25 299 3.98e-21 93.6
MsG0380014466.01.T01 MTR_4g078110 27.734 256 171 5 32 287 23 264 5.66e-21 93.2
MsG0380014466.01.T01 MTR_4g088195 24.555 281 197 7 30 301 25 299 7.08e-21 93.2
MsG0380014466.01.T01 MTR_3g057880 50.588 85 38 3 12 95 37 118 9.76e-21 86.3
MsG0380014466.01.T01 MTR_3g467200 26.812 276 172 10 46 301 59 324 7.05e-20 90.1
MsG0380014466.01.T01 MTR_8g073950 24.921 317 209 8 11 306 14 322 4.87e-19 87.8
MsG0380014466.01.T01 MTR_2g437880 27.632 228 145 7 49 259 44 268 4.98e-19 87.4
MsG0380014466.01.T01 MTR_1g037370 29.952 207 135 5 37 236 31 234 5.86e-19 87.4
MsG0380014466.01.T01 MTR_1g091023 26.351 296 200 9 14 301 10 295 1.00e-18 86.7
MsG0380014466.01.T01 MTR_0171s0030 24.434 221 153 5 91 301 2 218 1.36e-18 85.9
MsG0380014466.01.T01 MTR_1g097220 26.578 301 198 10 12 300 34 323 1.62e-18 86.3
MsG0380014466.01.T01 MTR_1g091010 25.497 302 208 8 7 301 3 294 2.31e-18 85.5
MsG0380014466.01.T01 MTR_8g091680 27.165 254 132 8 54 301 44 250 3.21e-18 85.1
MsG0380014466.01.T01 MTR_3g467290 24.522 314 206 9 6 298 23 326 3.79e-18 85.1
MsG0380014466.01.T01 MTR_5g070830 32.821 195 115 6 116 301 225 412 5.35e-18 84.7
MsG0380014466.01.T01 MTR_8g073960 25.316 316 206 9 8 301 14 321 5.59e-18 84.3
MsG0380014466.01.T01 MTR_0155s0010 37.607 117 72 1 39 155 19 134 7.56e-18 79.0
MsG0380014466.01.T01 MTR_7g075540 28.070 285 189 8 8 284 6 282 1.56e-17 83.2
MsG0380014466.01.T01 MTR_5g075450 26.064 188 128 3 17 200 19 199 3.15e-17 82.4
MsG0380014466.01.T01 MTR_1g091003 26.014 296 201 9 14 301 10 295 4.19e-17 81.6
MsG0380014466.01.T01 MTR_7g075600 23.750 240 170 4 54 284 50 285 1.68e-16 80.1
MsG0380014466.01.T01 MTR_2g105360 23.577 246 169 4 31 258 27 271 3.09e-16 79.3
MsG0380014466.01.T01 MTR_6g084910 36.975 119 68 4 116 231 3 117 3.94e-16 73.9
MsG0380014466.01.T01 MTR_7g075580 25.103 243 157 6 54 281 50 282 5.88e-16 78.6
MsG0380014466.01.T01 MTR_8g076390 24.735 283 184 8 45 306 52 326 1.76e-15 77.0
MsG0380014466.01.T01 MTR_1g111240 26.596 188 128 4 46 223 74 261 6.19e-15 75.5
MsG0380014466.01.T01 MTR_8g076372 24.820 278 180 8 45 301 52 321 1.22e-14 74.7
MsG0380014466.01.T01 MTR_4g131830 27.679 224 151 7 10 226 9 228 2.09e-14 73.9
MsG0380014466.01.T01 MTR_1g492820 23.611 288 198 10 8 284 23 299 3.11e-14 73.2
MsG0380014466.01.T01 MTR_5g045250 25.483 259 167 11 39 283 58 304 3.76e-13 70.1
MsG0380014466.01.T01 MTR_2g010300 27.907 172 119 3 33 199 26 197 4.80e-13 69.7
MsG0380014466.01.T01 MTR_3g058150 51.786 56 27 0 73 128 1 56 6.10e-13 63.2
MsG0380014466.01.T01 MTR_8g063280 27.160 243 159 9 37 268 30 265 6.33e-12 66.2
MsG0380014466.01.T01 MTR_8g027040 24.904 261 160 11 40 283 87 328 9.04e-12 65.9
MsG0380014466.01.T01 MTR_2g073480 27.869 122 86 1 73 192 1 122 3.08e-11 63.9
MsG0380014466.01.T01 MTR_2g010290 23.792 269 183 10 33 284 69 332 7.53e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014466.01.T01 AT3G26310 35.786 299 162 9 15 301 15 295 4.09e-53 181
MsG0380014466.01.T01 AT1G13110 34.967 306 180 8 6 300 3 300 8.45e-53 181
MsG0380014466.01.T01 AT3G48310 34.286 280 168 3 22 301 24 287 5.95e-51 175
MsG0380014466.01.T01 AT5G24950 33.574 277 171 4 30 301 25 293 1.13e-50 174
MsG0380014466.01.T01 AT3G48280 32.558 301 188 3 1 301 1 286 1.69e-50 174
MsG0380014466.01.T01 AT4G13310 35.531 273 161 4 35 300 30 294 2.57e-50 171
MsG0380014466.01.T01 AT3G48320 33.223 301 184 4 2 301 3 287 7.72e-50 172
MsG0380014466.01.T01 AT3G48300 34.058 276 172 3 26 301 19 284 2.67e-49 171
MsG0380014466.01.T01 AT3G48300 34.058 276 172 3 26 301 21 286 2.77e-49 171
MsG0380014466.01.T01 AT4G13310 35.531 273 161 4 35 300 30 294 3.67e-49 171
MsG0380014466.01.T01 AT3G48270 33.696 276 173 3 26 301 21 286 3.79e-49 171
MsG0380014466.01.T01 AT5G57260 35.897 273 159 6 38 301 31 296 1.55e-48 169
MsG0380014466.01.T01 AT3G26320 34.397 282 168 6 29 301 23 296 1.02e-47 167
MsG0380014466.01.T01 AT3G26270 35.000 280 168 8 29 299 24 298 1.30e-47 167
MsG0380014466.01.T01 AT3G26280 36.842 285 158 11 29 300 24 299 4.00e-47 165
MsG0380014466.01.T01 AT3G26280 36.842 285 158 11 29 300 41 316 4.07e-47 166
MsG0380014466.01.T01 AT1G11610 32.852 277 172 4 30 301 26 293 6.86e-47 165
MsG0380014466.01.T01 AT1G11610 32.852 277 172 4 30 301 26 293 7.74e-47 164
MsG0380014466.01.T01 AT3G48290 32.836 268 171 2 36 303 32 290 1.17e-46 164
MsG0380014466.01.T01 AT2G30770 34.686 271 163 5 36 301 32 293 3.91e-46 162
MsG0380014466.01.T01 AT3G26330 33.700 273 164 6 38 301 32 296 5.85e-46 162
MsG0380014466.01.T01 AT3G48290 32.707 266 170 2 36 301 32 288 6.15e-46 162
MsG0380014466.01.T01 AT2G24180 35.252 278 164 6 33 301 32 302 1.03e-45 162
MsG0380014466.01.T01 AT5G24960 32.472 271 170 4 36 301 32 294 1.48e-45 159
MsG0380014466.01.T01 AT3G26290 34.066 273 157 7 41 301 35 296 2.45e-45 160
MsG0380014466.01.T01 AT3G26290 34.066 273 157 7 41 301 48 309 3.55e-45 160
MsG0380014466.01.T01 AT5G25120 34.202 307 179 9 3 301 1 292 3.69e-45 160
MsG0380014466.01.T01 AT3G26300 32.776 299 172 8 15 301 15 296 4.24e-45 160
MsG0380014466.01.T01 AT3G26210 37.879 264 149 5 46 300 40 297 1.12e-44 159
MsG0380014466.01.T01 AT5G24960 32.472 271 170 4 36 301 32 294 1.85e-44 158
MsG0380014466.01.T01 AT3G26170 32.797 311 183 12 3 300 1 298 3.39e-44 157
MsG0380014466.01.T01 AT5G07990 31.023 303 194 6 8 301 1 297 4.83e-44 157
MsG0380014466.01.T01 AT2G30750 33.688 282 172 5 26 301 21 293 1.60e-43 155
MsG0380014466.01.T01 AT1G13090 32.746 284 170 7 33 304 24 298 1.88e-43 151
MsG0380014466.01.T01 AT4G36220 35.185 270 159 7 45 301 48 314 6.93e-43 154
MsG0380014466.01.T01 AT4G13290 31.783 258 161 4 29 279 25 274 1.35e-42 153
MsG0380014466.01.T01 AT3G26220 33.550 307 181 12 6 300 3 298 6.28e-42 151
MsG0380014466.01.T01 AT1G13080 34.628 309 177 9 6 301 3 299 1.06e-41 151
MsG0380014466.01.T01 AT1G13090 32.857 280 167 7 33 300 24 294 2.03e-41 150
MsG0380014466.01.T01 AT5G42590 33.333 303 182 9 5 301 6 294 6.83e-41 149
MsG0380014466.01.T01 AT3G26230 33.887 301 178 10 11 300 5 295 1.18e-40 148
MsG0380014466.01.T01 AT3G26180 30.645 310 191 10 3 300 1 298 1.20e-40 148
MsG0380014466.01.T01 AT4G31500 30.325 277 182 4 31 301 23 294 1.30e-40 148
MsG0380014466.01.T01 AT2G02580 32.581 310 178 9 3 301 7 296 1.99e-40 147
MsG0380014466.01.T01 AT5G25180 32.899 307 176 10 5 301 6 292 2.31e-40 147
MsG0380014466.01.T01 AT5G25140 32.143 308 184 9 3 301 1 292 2.64e-40 147
MsG0380014466.01.T01 AT5G06900 32.601 273 169 5 37 301 34 299 4.17e-40 147
MsG0380014466.01.T01 AT5G04330 33.091 275 168 8 38 301 33 302 2.33e-39 145
MsG0380014466.01.T01 AT3G44250 32.014 278 172 5 33 300 24 294 2.43e-39 144
MsG0380014466.01.T01 AT3G26160 31.731 312 187 11 1 300 1 298 3.07e-39 144
MsG0380014466.01.T01 AT5G25130 32.443 262 162 6 1 256 1 253 9.09e-39 143
MsG0380014466.01.T01 AT3G26190 33.688 282 163 9 33 300 24 295 1.48e-38 142
MsG0380014466.01.T01 AT5G06905 30.976 297 190 6 13 301 7 296 2.86e-37 139
MsG0380014466.01.T01 AT3G26150 30.769 312 190 10 1 300 1 298 4.70e-37 138
MsG0380014466.01.T01 AT4G13770 31.399 293 184 6 15 301 14 295 3.01e-36 136
MsG0380014466.01.T01 AT3G26200 32.168 286 170 9 29 300 20 295 1.15e-35 134
MsG0380014466.01.T01 AT3G26830 30.868 311 180 10 6 300 3 294 9.85e-34 129
MsG0380014466.01.T01 AT1G01280 32.331 266 164 6 46 300 41 301 1.51e-33 129
MsG0380014466.01.T01 AT4G20240 28.623 276 182 6 31 300 27 293 2.91e-33 126
MsG0380014466.01.T01 AT4G20240 28.623 276 182 6 31 300 27 293 1.09e-32 125
MsG0380014466.01.T01 AT3G53280 29.032 279 178 7 33 300 24 293 1.21e-31 123
MsG0380014466.01.T01 AT4G12300 27.667 300 197 9 12 300 18 308 1.52e-30 120
MsG0380014466.01.T01 AT4G12320 27.915 283 190 8 28 301 34 311 1.72e-30 120
MsG0380014466.01.T01 AT1G13100 29.740 269 164 8 46 300 37 294 1.85e-30 120
MsG0380014466.01.T01 AT5G44620 28.030 264 177 5 46 301 55 313 2.01e-30 120
MsG0380014466.01.T01 AT4G20235 29.457 258 150 8 5 256 3 234 2.97e-30 117
MsG0380014466.01.T01 AT5G67310 25.321 312 207 9 3 305 16 310 4.46e-30 119
MsG0380014466.01.T01 AT2G42250 29.730 296 194 6 12 301 18 305 7.06e-30 119
MsG0380014466.01.T01 AT3G53300 30.952 252 158 6 37 279 28 272 1.50e-29 117
MsG0380014466.01.T01 AT2G45560 27.517 298 196 7 8 292 9 299 4.88e-29 113
MsG0380014466.01.T01 AT4G37320 27.215 316 195 10 4 305 5 299 1.03e-28 115
MsG0380014466.01.T01 AT4G22710 26.515 264 180 5 46 301 62 319 1.35e-28 115
MsG0380014466.01.T01 AT2G45550 27.451 306 202 8 8 301 9 306 2.27e-28 114
MsG0380014466.01.T01 AT4G15330 26.821 302 201 5 5 300 14 301 5.20e-28 113
MsG0380014466.01.T01 AT2G45560 29.915 234 146 5 8 228 9 237 7.70e-28 108
MsG0380014466.01.T01 AT4G22690 26.136 264 181 5 46 301 93 350 8.04e-28 113
MsG0380014466.01.T01 AT2G45560 27.517 298 196 7 8 292 9 299 8.11e-28 113
MsG0380014466.01.T01 AT2G25160 28.571 294 181 10 5 280 6 288 1.30e-27 111
MsG0380014466.01.T01 AT3G20140 26.923 286 189 7 26 301 31 306 1.62e-27 112
MsG0380014466.01.T01 AT3G20940 25.436 287 203 4 26 306 31 312 3.20e-27 111
MsG0380014466.01.T01 AT2G25160 28.571 294 181 10 5 280 6 288 3.21e-27 111
MsG0380014466.01.T01 AT4G37330 29.393 313 189 8 4 305 5 296 4.38e-27 110
MsG0380014466.01.T01 AT3G52970 27.907 258 175 5 37 286 36 290 8.15e-27 110
MsG0380014466.01.T01 AT3G20110 27.961 304 199 7 10 301 8 303 1.48e-26 109
MsG0380014466.01.T01 AT4G15360 26.073 303 208 5 5 301 14 306 3.92e-26 108
MsG0380014466.01.T01 AT2G40890 26.071 280 182 6 35 300 25 293 3.95e-26 108
MsG0380014466.01.T01 AT1G33720 28.383 303 203 8 8 301 9 306 5.98e-26 107
MsG0380014466.01.T01 AT4G37340 26.282 312 194 11 11 305 7 299 8.71e-26 107
MsG0380014466.01.T01 AT3G20090 28.618 304 199 6 5 301 16 308 9.06e-26 107
MsG0380014466.01.T01 AT2G23220 29.110 292 179 10 28 305 37 314 1.15e-25 107
MsG0380014466.01.T01 AT4G37310 27.336 289 188 7 31 305 24 304 1.36e-25 106
MsG0380014466.01.T01 AT1G50520 27.138 269 172 6 46 301 52 309 1.46e-25 106
MsG0380014466.01.T01 AT5G10610 26.403 303 204 6 8 302 4 295 1.84e-25 106
MsG0380014466.01.T01 AT3G52970 26.838 272 174 5 37 286 36 304 2.47e-25 105
MsG0380014466.01.T01 AT2G23190 26.984 315 194 10 5 305 51 343 3.34e-25 105
MsG0380014466.01.T01 AT5G42580 25.203 246 168 4 58 301 60 291 6.46e-25 104
MsG0380014466.01.T01 AT4G12330 25.830 271 173 8 46 301 55 312 1.23e-24 103
MsG0380014466.01.T01 AT3G20950 25.484 310 215 6 5 306 14 315 5.31e-24 102
MsG0380014466.01.T01 AT2G45570 26.846 298 204 7 3 288 1 296 7.73e-24 101
MsG0380014466.01.T01 AT4G31970 27.344 256 161 8 45 279 40 291 9.33e-24 101
MsG0380014466.01.T01 AT3G32047 26.733 303 203 5 5 300 14 304 1.90e-23 100
MsG0380014466.01.T01 AT5G57220 30.851 188 125 4 12 195 3 189 2.41e-23 100
MsG0380014466.01.T01 AT2G14100 27.444 266 177 7 48 305 54 311 2.43e-23 100
MsG0380014466.01.T01 AT4G37430 36.242 149 92 3 11 157 1 148 2.71e-23 100
MsG0380014466.01.T01 AT4G31940 27.734 256 161 8 45 279 40 292 6.04e-23 99.0
MsG0380014466.01.T01 AT4G37410 34.375 192 116 6 11 194 1 190 6.52e-23 99.0
MsG0380014466.01.T01 AT2G27000 27.465 284 187 6 28 301 30 304 6.67e-23 99.0
MsG0380014466.01.T01 AT3G20130 23.333 270 175 6 48 301 53 306 1.04e-22 98.6
MsG0380014466.01.T01 AT5G10600 26.165 279 180 8 37 302 46 311 1.47e-22 97.8
MsG0380014466.01.T01 AT1G50560 25.095 263 182 4 48 301 54 310 1.80e-22 97.8
MsG0380014466.01.T01 AT4G12310 25.279 269 188 7 46 305 53 317 2.49e-22 97.4
MsG0380014466.01.T01 AT3G25180 25.448 279 195 6 11 278 12 288 2.24e-21 94.0
MsG0380014466.01.T01 AT1G28430 24.832 298 212 3 9 300 12 303 2.42e-21 94.4
MsG0380014466.01.T01 AT3G20100 25.926 270 173 7 46 301 50 306 2.70e-21 94.4
MsG0380014466.01.T01 AT5G36220 23.529 306 209 6 14 305 11 305 2.82e-21 94.4
MsG0380014466.01.T01 AT5G35715 28.692 237 156 6 73 300 1 233 6.02e-21 92.8
MsG0380014466.01.T01 AT3G25180 25.448 279 195 6 11 278 12 288 7.49e-21 92.8
MsG0380014466.01.T01 AT5G47990 23.462 260 188 3 48 301 53 307 1.04e-20 92.4
MsG0380014466.01.T01 AT3G61040 26.103 272 182 6 38 301 34 294 1.07e-20 91.7
MsG0380014466.01.T01 AT3G20080 27.018 285 189 6 26 300 31 306 1.26e-20 92.4
MsG0380014466.01.T01 AT3G20080 27.018 285 189 6 26 300 31 306 1.26e-20 92.4
MsG0380014466.01.T01 AT4G37400 25.830 271 174 9 46 305 40 294 2.81e-20 91.3
MsG0380014466.01.T01 AT3G61040 26.103 272 182 6 38 301 34 294 3.09e-20 91.3
MsG0380014466.01.T01 AT4G37360 24.719 267 174 9 3 253 1 256 4.89e-20 90.5
MsG0380014466.01.T01 AT2G05180 25.954 262 181 4 47 301 51 306 7.57e-20 89.7
MsG0380014466.01.T01 AT1G74550 31.606 193 118 5 36 220 26 212 8.32e-20 89.7
MsG0380014466.01.T01 AT4G37370 26.349 315 199 12 3 301 1 298 2.51e-19 88.6
MsG0380014466.01.T01 AT5G09970 26.730 318 197 15 4 300 29 331 4.54e-19 87.8
MsG0380014466.01.T01 AT4G15350 24.335 263 183 6 48 301 45 300 5.60e-19 87.4
MsG0380014466.01.T01 AT3G20120 25.461 271 168 7 48 301 52 305 8.64e-19 87.0
MsG0380014466.01.T01 AT3G20960 23.904 251 164 4 65 301 69 306 9.18e-19 87.0
MsG0380014466.01.T01 AT3G28740 26.502 283 182 7 36 305 38 307 1.10e-18 86.7
MsG0380014466.01.T01 AT3G53305 34.146 164 100 4 73 228 1 164 1.15e-17 82.4
MsG0380014466.01.T01 AT3G53290 26.316 228 151 7 88 304 8 229 1.69e-17 82.8
MsG0380014466.01.T01 AT1G11600 28.713 202 138 4 31 226 29 230 1.70e-17 83.2
MsG0380014466.01.T01 AT3G26180 37.931 116 64 4 3 117 1 109 3.25e-17 81.6
MsG0380014466.01.T01 AT3G10560 31.056 161 105 4 14 168 20 180 7.39e-17 81.3
MsG0380014466.01.T01 AT2G45580 27.682 289 187 8 27 301 28 308 9.42e-17 80.5
MsG0380014466.01.T01 AT2G45580 27.835 291 184 8 27 301 28 308 1.02e-16 80.9
MsG0380014466.01.T01 AT2G27010 25.914 301 180 8 7 301 19 282 4.21e-16 79.0
MsG0380014466.01.T01 AT4G31950 25.681 257 153 10 45 279 40 280 4.48e-16 79.0
MsG0380014466.01.T01 AT1G79370 23.151 311 201 8 14 294 24 326 1.75e-15 77.0
MsG0380014466.01.T01 AT1G16410 22.956 318 210 9 6 298 14 321 6.02e-15 75.1
MsG0380014466.01.T01 AT1G16410 22.956 318 210 9 6 298 14 321 7.96e-15 75.1
MsG0380014466.01.T01 AT3G03470 24.896 241 167 6 33 264 27 262 7.97e-15 75.1
MsG0380014466.01.T01 AT1G58260 23.301 309 209 11 12 298 10 312 1.26e-14 74.7
MsG0380014466.01.T01 AT1G13710 26.800 250 152 9 48 279 59 295 1.28e-14 74.7
MsG0380014466.01.T01 AT5G61320 28.251 223 143 8 62 271 58 276 1.35e-14 74.3
MsG0380014466.01.T01 AT1G74540 24.370 238 157 7 5 232 2 226 1.45e-14 74.3
MsG0380014466.01.T01 AT1G16400 23.988 321 203 10 9 298 10 320 1.46e-14 74.3
MsG0380014466.01.T01 AT2G22330 22.756 312 206 9 8 300 60 355 2.53e-14 73.6
MsG0380014466.01.T01 AT2G22330 22.756 312 206 9 8 300 37 332 2.58e-14 73.6
MsG0380014466.01.T01 AT4G15330 23.510 302 183 6 5 300 14 273 4.11e-14 72.8
MsG0380014466.01.T01 AT4G39950 23.675 283 189 7 37 300 56 330 1.04e-13 72.0
MsG0380014466.01.T01 AT4G39950 23.675 283 189 7 37 300 96 370 1.37e-13 71.6
MsG0380014466.01.T01 AT4G15380 24.710 259 179 6 48 300 53 301 1.10e-12 68.6
MsG0380014466.01.T01 AT1G64940 24.828 290 203 8 6 282 3 290 2.37e-12 67.8
MsG0380014466.01.T01 AT5G25900 23.864 264 174 8 29 273 33 288 2.64e-12 67.4
MsG0380014466.01.T01 AT5G05260 28.488 172 107 6 8 168 8 174 5.42e-12 66.6
MsG0380014466.01.T01 AT5G05260 28.488 172 107 6 8 168 8 174 5.87e-12 66.6
MsG0380014466.01.T01 AT5G35917 24.324 296 181 12 36 300 41 324 9.62e-12 65.9
MsG0380014466.01.T01 AT3G61035 25.874 286 152 11 46 303 51 304 4.21e-11 63.2
MsG0380014466.01.T01 AT2G30490 28.934 197 129 3 8 200 10 199 6.73e-11 63.2

Find 59 sgRNAs with CRISPR-Local

Find 70 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTATAATTGGTAGCTTTAT+AGG 0.131100 3:+55225335 None:intergenic
TGCAATATTTCACTGGTTTA+AGG 0.136397 3:-55224773 MsG0380014466.01.T01:CDS
CTGCTTCTTGTGGCAACTAT+TGG 0.213872 3:-55225088 MsG0380014466.01.T01:CDS
GAGAACTCTTCTTCTCTAAT+TGG 0.239515 3:+55225002 None:intergenic
GGTAGCTTTATAGGCCCTTT+AGG 0.255792 3:+55225344 None:intergenic
TATTATTCTTACCAAGATTA+TGG 0.266949 3:+55224563 None:intergenic
TTGTGTAAATTTCCTATAAT+TGG 0.268961 3:+55225323 None:intergenic
CCTATAAAGCTACCAATTAT+AGG 0.284221 3:-55225335 MsG0380014466.01.T01:CDS
GTAGCTTTATAGGCCCTTTA+GGG 0.312710 3:+55225345 None:intergenic
ATGACATTAACTTTGCAATA+AGG 0.314474 3:-55225163 MsG0380014466.01.T01:CDS
AGAGACTTGGCCAGAAAATA+TGG 0.324138 3:-55225269 MsG0380014466.01.T01:CDS
TGATTCAGCTTGGTCATAAC+TGG 0.370038 3:+55224668 None:intergenic
ATCGTTTCAAAATCTGCCTT+TGG 0.387916 3:-55224900 MsG0380014466.01.T01:CDS
TCTACAGATTGATCAGATAA+TGG 0.401117 3:-55224730 MsG0380014466.01.T01:CDS
GTCATAACTGGCATTTGACT+TGG 0.412503 3:+55224680 None:intergenic
CTTCTTGTGGCAACTATTGG+AGG 0.413614 3:-55225085 MsG0380014466.01.T01:CDS
TATTGCAGCCATGTAATAGA+AGG 0.413703 3:+55224789 None:intergenic
CCCTTGATGCATCTTCAACT+TGG 0.414015 3:-55225245 MsG0380014466.01.T01:CDS
ATTTGTTTCCTTCTATTACA+TGG 0.439569 3:-55224797 MsG0380014466.01.T01:CDS
CAATATCAAGGCCATAATCT+TGG 0.454133 3:-55224574 MsG0380014466.01.T01:CDS
CTGCTGATATAAATTTGTCT+TGG 0.457791 3:+55224862 None:intergenic
TTTCATCATCTGACTGTGCT+AGG 0.459026 3:-55225202 MsG0380014466.01.T01:CDS
TACAGCTTCAGTGAGGTTGA+TGG 0.480870 3:+55224941 None:intergenic
ATCACCGAAGCTAGCGTTGG+AGG 0.489482 3:+55225140 None:intergenic
AGTTCTCTAATCTTGTCAAA+TGG 0.490306 3:-55224986 MsG0380014466.01.T01:CDS
ACATGGCTGCAATATTTCAC+TGG 0.492450 3:-55224780 MsG0380014466.01.T01:CDS
CAACTTATAACCTCCCTAAA+GGG 0.492790 3:-55225358 MsG0380014466.01.T01:CDS
CTTGACTAAAGACAATATCA+AGG 0.495267 3:-55224586 MsG0380014466.01.T01:CDS
TGACTTGGCCTCTTTGTGCT+CGG 0.498157 3:+55224695 None:intergenic
ACTCTTCTTCTCTAATTGGC+TGG 0.504713 3:+55225006 None:intergenic
AAGGCCTCCAACGCTAGCTT+CGG 0.506009 3:-55225144 MsG0380014466.01.T01:CDS
AGCTGAATCAGATAAAGATC+TGG 0.508806 3:-55224655 MsG0380014466.01.T01:CDS
GATCTTTATCTGATTCAGCT+TGG 0.511774 3:+55224658 None:intergenic
GAGTTAGTAAAGGTTGCAGC+AGG 0.513252 3:-55224834 MsG0380014466.01.T01:CDS
TCAACTTATAACCTCCCTAA+AGG 0.520034 3:-55225359 MsG0380014466.01.T01:CDS
ACAGCTTCAGTGAGGTTGAT+GGG 0.521812 3:+55224942 None:intergenic
TCCAAGTTGAAGATGCATCA+AGG 0.528078 3:+55225244 None:intergenic
ATACTCGCTTATAATTCTAC+AGG 0.529456 3:-55225119 MsG0380014466.01.T01:CDS
TTCATCATCTGACTGTGCTA+GGG 0.530749 3:-55225201 MsG0380014466.01.T01:CDS
AAATGGATCGCTTCGAAGGA+AGG 0.537193 3:-55224969 MsG0380014466.01.T01:CDS
TCTGTAGATGCACCCTCTCA+AGG 0.538928 3:+55224745 None:intergenic
GTCTTTACACTTCTTGCCAA+AGG 0.540103 3:+55224884 None:intergenic
AGCAGTAAAAGAGTTAGTAA+AGG 0.551014 3:-55224844 MsG0380014466.01.T01:CDS
GTTTAAGGCGTAACCTTGAG+AGG 0.560539 3:-55224758 MsG0380014466.01.T01:CDS
TCAACTTGGAGAGGTTTCCA+TGG 0.563689 3:-55225231 MsG0380014466.01.T01:CDS
TGTCAAATGGATCGCTTCGA+AGG 0.565142 3:-55224973 MsG0380014466.01.T01:CDS
GTAGATGATTTCTAGAGCCA+TGG 0.567616 3:+55225457 None:intergenic
GATGCATCTTCAACTTGGAG+AGG 0.573573 3:-55225240 MsG0380014466.01.T01:CDS
GGTATAGCTTCTGCTTCTTG+TGG 0.577390 3:-55225098 MsG0380014466.01.T01:CDS
CCAAGTTGAAGATGCATCAA+GGG 0.578944 3:+55225245 None:intergenic
GTTCTCATAAGATATGAAGA+TGG 0.586900 3:-55224627 MsG0380014466.01.T01:CDS
AGTATCACCGAAGCTAGCGT+TGG 0.590255 3:+55225137 None:intergenic
GCTTTATAGGCCCTTTAGGG+AGG 0.599440 3:+55225348 None:intergenic
AGATGATGAAATTACAACCA+TGG 0.624667 3:+55225214 None:intergenic
CATCATCGCCGAGCACAAAG+AGG 0.625248 3:-55224703 MsG0380014466.01.T01:CDS
ATATGAAGATGGCAACAACC+AGG 0.636177 3:-55224616 MsG0380014466.01.T01:CDS
TTTAAGGCGTAACCTTGAGA+GGG 0.644552 3:-55224757 MsG0380014466.01.T01:CDS
AACAAGGGCTAAGAGAACAA+AGG 0.682362 3:+55225418 None:intergenic
TAGAAATTACAGCTTCAGTG+AGG 0.704974 3:+55224934 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTCTTACCAAGATTA+TGG + Chr3:55225452-55225471 None:intergenic 20.0%
!! TTGTGTAAATTTCCTATAAT+TGG + Chr3:55224692-55224711 None:intergenic 20.0%
! ATGACATTAACTTTGCAATA+AGG - Chr3:55224849-55224868 MsG0380014466.01.T01:CDS 25.0%
! ATTTGTTTCCTTCTATTACA+TGG - Chr3:55225215-55225234 MsG0380014466.01.T01:CDS 25.0%
AGATGATGAAATTACAACCA+TGG + Chr3:55224801-55224820 None:intergenic 30.0%
AGCAGTAAAAGAGTTAGTAA+AGG - Chr3:55225168-55225187 MsG0380014466.01.T01:CDS 30.0%
AGTTCTCTAATCTTGTCAAA+TGG - Chr3:55225026-55225045 MsG0380014466.01.T01:CDS 30.0%
ATACTCGCTTATAATTCTAC+AGG - Chr3:55224893-55224912 MsG0380014466.01.T01:CDS 30.0%
CAAAGGAAAAAAGATAACAC+AGG + Chr3:55224580-55224599 None:intergenic 30.0%
CCTATAAAGCTACCAATTAT+AGG - Chr3:55224677-55224696 MsG0380014466.01.T01:CDS 30.0%
CTGCTGATATAAATTTGTCT+TGG + Chr3:55225153-55225172 None:intergenic 30.0%
CTTGACTAAAGACAATATCA+AGG - Chr3:55225426-55225445 MsG0380014466.01.T01:CDS 30.0%
CTTTAGTCAAGAAAAATTCC+TGG + Chr3:55225417-55225436 None:intergenic 30.0%
GTTCTCATAAGATATGAAGA+TGG - Chr3:55225385-55225404 MsG0380014466.01.T01:CDS 30.0%
TCTACAGATTGATCAGATAA+TGG - Chr3:55225282-55225301 MsG0380014466.01.T01:CDS 30.0%
!! CCTATAATTGGTAGCTTTAT+AGG + Chr3:55224680-55224699 None:intergenic 30.0%
!! TGCAATATTTCACTGGTTTA+AGG - Chr3:55225239-55225258 MsG0380014466.01.T01:CDS 30.0%
!!! TCCTACTTTTTGTACAACAA+GGG + Chr3:55224612-55224631 None:intergenic 30.0%
!!! TTCCTACTTTTTGTACAACA+AGG + Chr3:55224613-55224632 None:intergenic 30.0%
ACATCAAAAACTGAGAGACT+TGG - Chr3:55224730-55224749 MsG0380014466.01.T01:CDS 35.0%
AGCTGAATCAGATAAAGATC+TGG - Chr3:55225357-55225376 MsG0380014466.01.T01:CDS 35.0%
ATCGTTTCAAAATCTGCCTT+TGG - Chr3:55225112-55225131 MsG0380014466.01.T01:CDS 35.0%
CAACTTATAACCTCCCTAAA+GGG - Chr3:55224654-55224673 MsG0380014466.01.T01:CDS 35.0%
CAATATCAAGGCCATAATCT+TGG - Chr3:55225438-55225457 MsG0380014466.01.T01:CDS 35.0%
GAGAACTCTTCTTCTCTAAT+TGG + Chr3:55225013-55225032 None:intergenic 35.0%
GATCTTTATCTGATTCAGCT+TGG + Chr3:55225357-55225376 None:intergenic 35.0%
GCTAAGAAAAATTTGCACCT+TGG - Chr3:55224952-55224971 MsG0380014466.01.T01:CDS 35.0%
TAGAAATTACAGCTTCAGTG+AGG + Chr3:55225081-55225100 None:intergenic 35.0%
TATTGCAGCCATGTAATAGA+AGG + Chr3:55225226-55225245 None:intergenic 35.0%
TCAACTTATAACCTCCCTAA+AGG - Chr3:55224653-55224672 MsG0380014466.01.T01:CDS 35.0%
! AAGTCTCTCAGTTTTTGATG+TGG + Chr3:55224731-55224750 None:intergenic 35.0%
!!! AAAGGCAGATTTTGAAACGA+TGG + Chr3:55225113-55225132 None:intergenic 35.0%
AACAAGGGCTAAGAGAACAA+AGG + Chr3:55224597-55224616 None:intergenic 40.0%
ACATGGCTGCAATATTTCAC+TGG - Chr3:55225232-55225251 MsG0380014466.01.T01:CDS 40.0%
ACTCTTCTTCTCTAATTGGC+TGG + Chr3:55225009-55225028 None:intergenic 40.0%
AGAGACTTGGCCAGAAAATA+TGG - Chr3:55224743-55224762 MsG0380014466.01.T01:CDS 40.0%
ATATGAAGATGGCAACAACC+AGG - Chr3:55225396-55225415 MsG0380014466.01.T01:CDS 40.0%
GTCATAACTGGCATTTGACT+TGG + Chr3:55225335-55225354 None:intergenic 40.0%
GTCTTTACACTTCTTGCCAA+AGG + Chr3:55225131-55225150 None:intergenic 40.0%
TGATTCAGCTTGGTCATAAC+TGG + Chr3:55225347-55225366 None:intergenic 40.0%
TTCATCATCTGACTGTGCTA+GGG - Chr3:55224811-55224830 MsG0380014466.01.T01:CDS 40.0%
TTTCATCATCTGACTGTGCT+AGG - Chr3:55224810-55224829 MsG0380014466.01.T01:CDS 40.0%
! CATCAAGGGTCCATATTTTC+TGG + Chr3:55224756-55224775 None:intergenic 40.0%
! CCAAGTTGAAGATGCATCAA+GGG + Chr3:55224770-55224789 None:intergenic 40.0%
! GCCCTTGTTGTACAAAAAGT+AGG - Chr3:55224608-55224627 MsG0380014466.01.T01:CDS 40.0%
! TCCAAGTTGAAGATGCATCA+AGG + Chr3:55224771-55224790 None:intergenic 40.0%
! TTTAAGGCGTAACCTTGAGA+GGG - Chr3:55225255-55225274 MsG0380014466.01.T01:CDS 40.0%
!! GTAGCTTTATAGGCCCTTTA+GGG + Chr3:55224670-55224689 None:intergenic 40.0%
AAATGGATCGCTTCGAAGGA+AGG - Chr3:55225043-55225062 MsG0380014466.01.T01:CDS 45.0%
CCCTTGATGCATCTTCAACT+TGG - Chr3:55224767-55224786 MsG0380014466.01.T01:CDS 45.0%
CTGCTTCTTGTGGCAACTAT+TGG - Chr3:55224924-55224943 MsG0380014466.01.T01:CDS 45.0%
CTTCTTGTGGCAACTATTGG+AGG - Chr3:55224927-55224946 MsG0380014466.01.T01:CDS 45.0%
GAGTTAGTAAAGGTTGCAGC+AGG - Chr3:55225178-55225197 MsG0380014466.01.T01:CDS 45.0%
GATGCATCTTCAACTTGGAG+AGG - Chr3:55224772-55224791 MsG0380014466.01.T01:CDS 45.0%
GGTATAGCTTCTGCTTCTTG+TGG - Chr3:55224914-55224933 MsG0380014466.01.T01:CDS 45.0%
TACAGCTTCAGTGAGGTTGA+TGG + Chr3:55225074-55225093 None:intergenic 45.0%
TCAACTTGGAGAGGTTTCCA+TGG - Chr3:55224781-55224800 MsG0380014466.01.T01:CDS 45.0%
TGTCAAATGGATCGCTTCGA+AGG - Chr3:55225039-55225058 MsG0380014466.01.T01:CDS 45.0%
! ACAGCTTCAGTGAGGTTGAT+GGG + Chr3:55225073-55225092 None:intergenic 45.0%
! GGTAAGAGTTGACGCGTTTT+AGG + Chr3:55224988-55225007 None:intergenic 45.0%
! GTTTAAGGCGTAACCTTGAG+AGG - Chr3:55225254-55225273 MsG0380014466.01.T01:CDS 45.0%
! TTTTAGGCTCAGAAGCTCCA+AGG + Chr3:55224972-55224991 None:intergenic 45.0%
!! GGTAGCTTTATAGGCCCTTT+AGG + Chr3:55224671-55224690 None:intergenic 45.0%
AGTATCACCGAAGCTAGCGT+TGG + Chr3:55224878-55224897 None:intergenic 50.0%
TCTGTAGATGCACCCTCTCA+AGG + Chr3:55225270-55225289 None:intergenic 50.0%
! GCTTTATAGGCCCTTTAGGG+AGG + Chr3:55224667-55224686 None:intergenic 50.0%
! TGACTTGGCCTCTTTGTGCT+CGG + Chr3:55225320-55225339 None:intergenic 50.0%
CATCATCGCCGAGCACAAAG+AGG - Chr3:55225309-55225328 MsG0380014466.01.T01:CDS 55.0%
! AAGGCCTCCAACGCTAGCTT+CGG - Chr3:55224868-55224887 MsG0380014466.01.T01:CDS 55.0%
! ATCACCGAAGCTAGCGTTGG+AGG + Chr3:55224875-55224894 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr3 gene 55224557 55225477 55224557 ID=MsG0380014466.01;Name=MsG0380014466.01
Chr3 mRNA 55224557 55225477 55224557 ID=MsG0380014466.01.T01;Parent=MsG0380014466.01;Name=MsG0380014466.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|306
Chr3 exon 55224557 55225477 55224557 ID=MsG0380014466.01.T01:exon:17165;Parent=MsG0380014466.01.T01
Chr3 CDS 55224557 55225477 55224557 ID=MsG0380014466.01.T01:cds;Parent=MsG0380014466.01.T01
Gene Sequence

>MsG0380014466.01.T01

ATGGCTCTAGAAATCATCTACCTGTGTTATCTTTTTTCCTTTGTTCTCTTAGCCCTTGTTGTACAAAAAGTAGGAAAGAAGTTCAAGAAAACAGATTCAACTTATAACCTCCCTAAAGGGCCTATAAAGCTACCAATTATAGGAAATTTACACAATCTGTTAAGTTCTCAACCACATCAAAAACTGAGAGACTTGGCCAGAAAATATGGACCCTTGATGCATCTTCAACTTGGAGAGGTTTCCATGGTTGTAATTTCATCATCTGACTGTGCTAGGGAAGTGATGAAAACTCATGACATTAACTTTGCAATAAGGCCTCCAACGCTAGCTTCGGTGATACTCGCTTATAATTCTACAGGTATAGCTTCTGCTTCTTGTGGCAACTATTGGAGGCAGCTAAGAAAAATTTGCACCTTGGAGCTTCTGAGCCTAAAACGCGTCAACTCTTACCAGCCAATTAGAGAAGAAGAGTTCTCTAATCTTGTCAAATGGATCGCTTCGAAGGAAGGATCGCCCATCAACCTCACTGAAGCTGTAATTTCTACAATATACACCATCGTTTCAAAATCTGCCTTTGGCAAGAAGTGTAAAGACCAAGACAAATTTATATCAGCAGTAAAAGAGTTAGTAAAGGTTGCAGCAGGATTTGACTTAGCAGATTTGTTTCCTTCTATTACATGGCTGCAATATTTCACTGGTTTAAGGCGTAACCTTGAGAGGGTGCATCTACAGATTGATCAGATAATGGAAAACATCATCGCCGAGCACAAAGAGGCCAAGTCAAATGCCAGTTATGACCAAGCTGAATCAGATAAAGATCTGGTAGATGTTCTCATAAGATATGAAGATGGCAACAACCAGGAATTTTTCTTGACTAAAGACAATATCAAGGCCATAATCTTGGTAAGAATAATAACCTAA

Protein sequence

>MsG0380014466.01.T01

MALEIIYLCYLFSFVLLALVVQKVGKKFKKTDSTYNLPKGPIKLPIIGNLHNLLSSQPHQKLRDLARKYGPLMHLQLGEVSMVVISSSDCAREVMKTHDINFAIRPPTLASVILAYNSTGIASASCGNYWRQLRKICTLELLSLKRVNSYQPIREEEFSNLVKWIASKEGSPINLTEAVISTIYTIVSKSAFGKKCKDQDKFISAVKELVKVAAGFDLADLFPSITWLQYFTGLRRNLERVHLQIDQIMENIIAEHKEAKSNASYDQAESDKDLVDVLIRYEDGNNQEFFLTKDNIKAIILVRIIT*