AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0199730


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0199730 MtrunA17_Chr2g0294391 80.519 231 19 5 1 221 80 294 8.07e-124 358
Msa0199730 MtrunA17_Chr2g0294391 100.000 42 0 0 219 260 384 425 1.73e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 46 sgRNAs with CRISPR-Local

Find 147 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAATAAGAACTGTCTTAC+AGG 0.215768 2_1:+19106242 None:intergenic
TCATCCTGAGCATCTCTTAT+TGG 0.255116 2_1:-19104069 Msa0199730:CDS
AGCATCTCTTATTGGCTCTA+AGG 0.283609 2_1:-19104061 Msa0199730:CDS
CGTATTACCTTGCACTTGTA+TGG 0.296898 2_1:+19105621 None:intergenic
GAAGAACTATGGAGCGCTTT+AGG 0.302128 2_1:-19105405 Msa0199730:CDS
TAGTACTCTTGTTGGTGTTT+CGG 0.329633 2_1:+19105993 None:intergenic
ACATCTTATGCTGCCTTAGA+AGG 0.333220 2_1:-19106302 Msa0199730:CDS
AAGTTGAAGTTTCTAAGATT+TGG 0.338252 2_1:+19105154 None:intergenic
ATCTTAGAAACTTCAACTTA+TGG 0.342098 2_1:-19105150 Msa0199730:CDS
ATTGTTGAATCTCCAACATT+AGG 0.343139 2_1:+19105211 None:intergenic
TATGCTGCCTTAGAAGGCCT+TGG 0.350897 2_1:-19106296 Msa0199730:CDS
TCATAACCCAAGGCCTTCTA+AGG 0.373122 2_1:+19106289 None:intergenic
GTAGACTGTTTGAAGAACTA+TGG 0.378833 2_1:-19105416 Msa0199730:CDS
AGTCTGGTTTACACTCTTGC+TGG 0.381922 2_1:-19106513 Msa0199730:CDS
TCTAAGGGAAGCACTTGCTT+TGG 0.385951 2_1:-19104045 Msa0199730:CDS
ATAGATTATAGACATTTAAC+AGG 0.392814 2_1:+19104017 None:intergenic
ACAGGCTTTGCGATCATCAT+TGG 0.396972 2_1:+19106260 None:intergenic
TTTGTGAAGTAGATTTCTCT+TGG 0.401255 2_1:+19106028 None:intergenic
ATGCTGCCTTAGAAGGCCTT+GGG 0.406090 2_1:-19106295 Msa0199730:CDS
TGAAGCAGCTCCACCATGTT+GGG 0.410865 2_1:+19104100 None:intergenic
AAAACCTTTAGTACTCTTGT+TGG 0.443278 2_1:+19105985 None:intergenic
TGGAATGAGATTGCATTAGC+AGG 0.444449 2_1:+19106048 None:intergenic
CAGGTTAGTTTACCTAATGT+TGG 0.448264 2_1:-19105223 Msa0199730:CDS
CTTGATTGAAACTTTGATGT+TGG 0.455698 2_1:-19103979 Msa0199730:three_prime_UTR
TGCAGACATGTTCAGAATGT+TGG 0.464300 2_1:-19104146 Msa0199730:intron
AGGGAAGCACTTGCTTTGGT+TGG 0.480501 2_1:-19104041 Msa0199730:CDS
AGAGCCAATAAGAGATGCTC+AGG 0.491628 2_1:+19104065 None:intergenic
GTATGCTGACGTGTGATGTA+TGG 0.517198 2_1:+19106209 None:intergenic
CATGCAGGACGGAGTTATAA+CGG 0.522415 2_1:-19105866 Msa0199730:intron
AACACCAACAAGAGTACTAA+AGG 0.529000 2_1:-19105989 Msa0199730:intron
TAGAAACTTCAACTTATGGC+AGG 0.529444 2_1:-19105146 Msa0199730:intron
CAAGGGCGTGAACAGTCCTC+AGG 0.539741 2_1:+19106084 None:intergenic
GTTATAACGGAGCGCTGCTA+TGG 0.543440 2_1:-19105853 Msa0199730:CDS
CTTAACAGAATTTGATCCTG+AGG 0.554620 2_1:-19106100 Msa0199730:intron
GCATCTCTTATTGGCTCTAA+GGG 0.555107 2_1:-19104060 Msa0199730:CDS
TTGAAGCAGCTCCACCATGT+TGG 0.555464 2_1:+19104099 None:intergenic
TCCACCATGTTGGGATTGCA+TGG 0.562511 2_1:+19104109 None:intergenic
ACGGAGCGCTGCTATGGCTG+TGG 0.581963 2_1:-19105847 Msa0199730:CDS
GTTGTGAGTGCTGTGAATGA+AGG 0.582088 2_1:-19106342 Msa0199730:CDS
GGAATGAGATTGCATTAGCA+GGG 0.583303 2_1:+19106049 None:intergenic
TTGAGATCCATACAAGTGCA+AGG 0.633756 2_1:-19105628 Msa0199730:intron
CTGGTTTACACTCTTGCTGG+AGG 0.640252 2_1:-19106510 Msa0199730:intron
AGATCCATGCAATCCCAACA+TGG 0.647702 2_1:-19104113 Msa0199730:CDS
TTGGCACTGATCATAACCCA+AGG 0.681579 2_1:+19106279 None:intergenic
TCCATGCAATCCCAACATGG+TGG 0.701127 2_1:-19104110 Msa0199730:CDS
TGTGAATGAAGGAATTGAAG+TGG 0.703438 2_1:-19106331 Msa0199730:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAACTTGTGATGTTTAAT+TGG - chr2_1:19104541-19104560 Msa0199730:intron 20.0%
!! TGTTACACAAAACTAATTAA+GGG + chr2_1:19104695-19104714 None:intergenic 20.0%
!! ATGTTACACAAAACTAATTA+AGG + chr2_1:19104696-19104715 None:intergenic 20.0%
!!! TTTTATTAATCAAGTGATGA+AGG - chr2_1:19104861-19104880 Msa0199730:intron 20.0%
!! TTTATTAATCAAGTGATGAA+GGG - chr2_1:19104862-19104881 Msa0199730:intron 20.0%
!!! TCAATTTGTTAAAAGAAACA+TGG + chr2_1:19105379-19105398 None:intergenic 20.0%
!! ATAGATTATAGACATTTAAC+AGG + chr2_1:19106422-19106441 None:intergenic 20.0%
! AATTCAAGAATTGGATTATG+TGG - chr2_1:19104029-19104048 Msa0199730:CDS 25.0%
! AAAGTTTAATCTATGCTTAC+AGG - chr2_1:19104284-19104303 Msa0199730:intron 25.0%
!!! ATCGTACTTATTTTATCGTA+GGG + chr2_1:19104634-19104653 None:intergenic 25.0%
!!! TATCGTACTTATTTTATCGT+AGG + chr2_1:19104635-19104654 None:intergenic 25.0%
! TAAATATAAGAAGAGGTTGA+AGG + chr2_1:19105098-19105117 None:intergenic 25.0%
! TCAACCTCTTCTTATATTTA+AGG - chr2_1:19105098-19105117 Msa0199730:intron 25.0%
! CAACCTCTTCTTATATTTAA+GGG - chr2_1:19105099-19105118 Msa0199730:intron 25.0%
! AATCCCTTAAATATAAGAAG+AGG + chr2_1:19105105-19105124 None:intergenic 25.0%
! TCAATAAATACTTAGCTTCA+AGG - chr2_1:19105150-19105169 Msa0199730:CDS 25.0%
! ATTTACTATTGAAATGATCC+AGG - chr2_1:19105194-19105213 Msa0199730:CDS 25.0%
!!! AAGTTGAAGTTTCTAAGATT+TGG + chr2_1:19105285-19105304 None:intergenic 25.0%
! ATCTTAGAAACTTCAACTTA+TGG - chr2_1:19105286-19105305 Msa0199730:intron 25.0%
! AAGAAACATGGAATAGAATT+TGG + chr2_1:19105367-19105386 None:intergenic 25.0%
!!! GGAAAAGATTTTAATGAGAT+AGG - chr2_1:19105647-19105666 Msa0199730:CDS 25.0%
! GACATGATATGAATCTAAAA+TGG - chr2_1:19105734-19105753 Msa0199730:intron 25.0%
! ATTGAAGGATTGAAAAAAGA+AGG - chr2_1:19105900-19105919 Msa0199730:intron 25.0%
AACCAAGCAAATTCAAGAAT+TGG - chr2_1:19104020-19104039 Msa0199730:exon 30.0%
! ATCCAATTCTTGAATTTGCT+TGG + chr2_1:19104025-19104044 None:intergenic 30.0%
TTCAATAAGAACTGTCTTAC+AGG + chr2_1:19104197-19104216 None:intergenic 30.0%
AGGATCAAATTCTGTTAAGA+AGG + chr2_1:19104335-19104354 None:intergenic 30.0%
TTTGTGAAGTAGATTTCTCT+TGG + chr2_1:19104411-19104430 None:intergenic 30.0%
AAAACCTTTAGTACTCTTGT+TGG + chr2_1:19104454-19104473 None:intergenic 30.0%
TTTAATTGGATTGAACATGC+AGG - chr2_1:19104555-19104574 Msa0199730:intron 30.0%
!!! TCGTACTTATTTTATCGTAG+GGG + chr2_1:19104633-19104652 None:intergenic 30.0%
! TGTACTTTTCATATTGATCC+AGG - chr2_1:19104717-19104736 Msa0199730:intron 30.0%
TATATGAAAAGATCAAGCCT+CGG - chr2_1:19104906-19104925 Msa0199730:intron 30.0%
ATAGAAATGACATATCTCCA+AGG + chr2_1:19104940-19104959 None:intergenic 30.0%
TAGAAGGATGTATAGATACA+CGG + chr2_1:19104992-19105011 None:intergenic 30.0%
ATTGTTGAATCTCCAACATT+AGG + chr2_1:19105228-19105247 None:intergenic 30.0%
GTCTAACTTGAGTTTATACA+GGG + chr2_1:19105408-19105427 None:intergenic 30.0%
CTGTATAAACTCAAGTTAGA+CGG - chr2_1:19105407-19105426 Msa0199730:CDS 30.0%
GATAGGATATGGATATGATA+AGG - chr2_1:19105596-19105615 Msa0199730:intron 30.0%
!! AAGATTTTAATGAGATAGGC+AGG - chr2_1:19105651-19105670 Msa0199730:CDS 30.0%
GTCAAGTTATCATATCATGA+TGG - chr2_1:19105691-19105710 Msa0199730:CDS 30.0%
AATGTTTCATTCCCTTAACA+TGG - chr2_1:19105836-19105855 Msa0199730:CDS 30.0%
TTGTTTGTTTCCAGAATACT+TGG - chr2_1:19106031-19106050 Msa0199730:CDS 30.0%
! TTTTCATGATCCAAGTATTC+TGG + chr2_1:19106044-19106063 None:intergenic 30.0%
CTTGATTGAAACTTTGATGT+TGG - chr2_1:19106457-19106476 Msa0199730:intron 30.0%
TGTGAATGAAGGAATTGAAG+TGG - chr2_1:19104105-19104124 Msa0199730:CDS 35.0%
CTTAACAGAATTTGATCCTG+AGG - chr2_1:19104336-19104355 Msa0199730:intron 35.0%
! TAGTACTCTTGTTGGTGTTT+CGG + chr2_1:19104446-19104465 None:intergenic 35.0%
!! AACACCAACAAGAGTACTAA+AGG - chr2_1:19104447-19104466 Msa0199730:intron 35.0%
! TTTTCATATTGATCCAGGAG+AGG - chr2_1:19104722-19104741 Msa0199730:intron 35.0%
AATCAAGTGATGAAGGGATT+TGG - chr2_1:19104868-19104887 Msa0199730:intron 35.0%
GATGTATAGATACACGGAAA+CGG + chr2_1:19104986-19105005 None:intergenic 35.0%
GTATCTATACATCCTTCTAC+AGG - chr2_1:19104993-19105012 Msa0199730:intron 35.0%
GTAGACTGTTTGAAGAACTA+TGG - chr2_1:19105020-19105039 Msa0199730:intron 35.0%
CAACATTAGGTAAACTAACC+TGG + chr2_1:19105215-19105234 None:intergenic 35.0%
!! CAGGTTAGTTTACCTAATGT+TGG - chr2_1:19105213-19105232 Msa0199730:CDS 35.0%
TAGAAACTTCAACTTATGGC+AGG - chr2_1:19105290-19105309 Msa0199730:intron 35.0%
CGTCTAACTTGAGTTTATAC+AGG + chr2_1:19105409-19105428 None:intergenic 35.0%
TTTAGCCAATTGAACAGCAA+AGG + chr2_1:19105483-19105502 None:intergenic 35.0%
TTGAATTGTGAATACGAACC+AGG + chr2_1:19105521-19105540 None:intergenic 35.0%
TCTCTATCATGACCATCAAA+CGG + chr2_1:19105574-19105593 None:intergenic 35.0%
! TTTGATGGTCATGATAGAGA+CGG - chr2_1:19105574-19105593 Msa0199730:intron 35.0%
! ATAAGGTCTTATCCTCATGT+TGG - chr2_1:19105613-19105632 Msa0199730:intron 35.0%
ATGATACGTATAAACCCTGA+AGG + chr2_1:19105807-19105826 None:intergenic 35.0%
ACTAATGCTCACACAATTGA+AGG - chr2_1:19105885-19105904 Msa0199730:intron 35.0%
GTTTAAGTAATGCTGTCACT+TGG - chr2_1:19105940-19105959 Msa0199730:intron 35.0%
TTAATTAGCGGCATAGCTTA+TGG - chr2_1:19106098-19106117 Msa0199730:intron 35.0%
TACAAAAAGTAGCATGCCAA+TGG + chr2_1:19106259-19106278 None:intergenic 35.0%
ACATCTTATGCTGCCTTAGA+AGG - chr2_1:19104134-19104153 Msa0199730:CDS 40.0%
GGAATGAGATTGCATTAGCA+GGG + chr2_1:19104390-19104409 None:intergenic 40.0%
TGGAATGAGATTGCATTAGC+AGG + chr2_1:19104391-19104410 None:intergenic 40.0%
ATTGGATTGAACATGCAGGA+CGG - chr2_1:19104559-19104578 Msa0199730:intron 40.0%
! ATTTTATCGTAGGGGCAAAC+TGG + chr2_1:19104625-19104644 None:intergenic 40.0%
CTTACATATGTTACCTCTCC+TGG + chr2_1:19104738-19104757 None:intergenic 40.0%
TTGAGATCCATACAAGTGCA+AGG - chr2_1:19104808-19104827 Msa0199730:intron 40.0%
CGTATTACCTTGCACTTGTA+TGG + chr2_1:19104818-19104837 None:intergenic 40.0%
TTGAAGCTATTAGCCGTAAG+TGG - chr2_1:19105070-19105089 Msa0199730:intron 40.0%
!! GATAGCCTTTGCTGTTCAAT+TGG - chr2_1:19105475-19105494 Msa0199730:intron 40.0%
AATTGTGAATACGAACCAGG+CGG + chr2_1:19105518-19105537 None:intergenic 40.0%
! AGTCCTTTGAAAACCTTCAC+AGG - chr2_1:19105546-19105565 Msa0199730:intron 40.0%
CTCTATCATGACCATCAAAC+GGG + chr2_1:19105573-19105592 None:intergenic 40.0%
TGATAGAGACGGATAGGATA+TGG - chr2_1:19105585-19105604 Msa0199730:intron 40.0%
!! CCTCATGTTGGTTTCTTACT+CGG - chr2_1:19105625-19105644 Msa0199730:intron 40.0%
!! CTCATGTTGGTTTCTTACTC+GGG - chr2_1:19105626-19105645 Msa0199730:intron 40.0%
CAGGATAAGAGAGACATGAT+AGG + chr2_1:19105771-19105790 None:intergenic 40.0%
TTTCATTCCCTTAACATGGC+AGG - chr2_1:19105840-19105859 Msa0199730:CDS 40.0%
AAGAAAGCCTGCCATGTTAA+GGG + chr2_1:19105850-19105869 None:intergenic 40.0%
CTCACATTATGTGATGCCAT+TGG - chr2_1:19106240-19106259 Msa0199730:CDS 40.0%
TGCAGACATGTTCAGAATGT+TGG - chr2_1:19106290-19106309 Msa0199730:CDS 40.0%
TCATCCTGAGCATCTCTTAT+TGG - chr2_1:19106367-19106386 Msa0199730:intron 40.0%
!! AGCATCTCTTATTGGCTCTA+AGG - chr2_1:19106375-19106394 Msa0199730:intron 40.0%
!! GCATCTCTTATTGGCTCTAA+GGG - chr2_1:19106376-19106395 Msa0199730:intron 40.0%
! GTTGTGAGTGCTGTGAATGA+AGG - chr2_1:19104094-19104113 Msa0199730:CDS 45.0%
TCATAACCCAAGGCCTTCTA+AGG + chr2_1:19104150-19104169 None:intergenic 45.0%
!! TTGGCACTGATCATAACCCA+AGG + chr2_1:19104160-19104179 None:intergenic 45.0%
ACAGGCTTTGCGATCATCAT+TGG + chr2_1:19104179-19104198 None:intergenic 45.0%
GTATGCTGACGTGTGATGTA+TGG + chr2_1:19104230-19104249 None:intergenic 45.0%
! CAGGGCAAACATTTTCGCAA+GGG + chr2_1:19104372-19104391 None:intergenic 45.0%
CATGCAGGACGGAGTTATAA+CGG - chr2_1:19104570-19104589 Msa0199730:intron 45.0%
! GAAGAACTATGGAGCGCTTT+AGG - chr2_1:19105031-19105050 Msa0199730:intron 45.0%
ACTTCAACTTATGGCAGGTG+TGG - chr2_1:19105295-19105314 Msa0199730:intron 45.0%
CAATATCTCCACTCATCGGA+CGG + chr2_1:19105433-19105452 None:intergenic 45.0%
GTCCGATGAGTGGAGATATT+GGG - chr2_1:19105432-19105451 Msa0199730:intron 45.0%
CTCCCAATATCTCCACTCAT+CGG + chr2_1:19105437-19105456 None:intergenic 45.0%
ATGAGTGGAGATATTGGGAG+AGG - chr2_1:19105437-19105456 Msa0199730:intron 45.0%
TATTGGGAGAGGAGCAACTA+AGG - chr2_1:19105448-19105467 Msa0199730:intron 45.0%
AAAGCAAAAGATAGACCGCC+TGG - chr2_1:19105500-19105519 Msa0199730:intron 45.0%
! GGTCCTGTGAAGGTTTTCAA+AGG + chr2_1:19105552-19105571 None:intergenic 45.0%
TGGTCATGATAGAGACGGAT+AGG - chr2_1:19105579-19105598 Msa0199730:intron 45.0%
CCGAGTAAGAAACCAACATG+AGG + chr2_1:19105628-19105647 None:intergenic 45.0%
GCAGGATATGATATGCGACA+TGG - chr2_1:19105669-19105688 Msa0199730:CDS 45.0%
TCTTATCCTGACCATCGAAC+AGG - chr2_1:19105781-19105800 Msa0199730:intron 45.0%
GAAGAAAGCCTGCCATGTTA+AGG + chr2_1:19105851-19105870 None:intergenic 45.0%
CGCTAATTAACGCACATGAC+GGG + chr2_1:19106088-19106107 None:intergenic 45.0%
CCGCTAATTAACGCACATGA+CGG + chr2_1:19106089-19106108 None:intergenic 45.0%
CCGTCATGTGCGTTAATTAG+CGG - chr2_1:19106086-19106105 Msa0199730:CDS 45.0%
ATTAGCGGCATAGCTTATGG+CGG - chr2_1:19106101-19106120 Msa0199730:intron 45.0%
AGATCCATGCAATCCCAACA+TGG - chr2_1:19106323-19106342 Msa0199730:CDS 45.0%
AGAGCCAATAAGAGATGCTC+AGG + chr2_1:19106374-19106393 None:intergenic 45.0%
!! TCTAAGGGAAGCACTTGCTT+TGG - chr2_1:19106391-19106410 Msa0199730:intron 45.0%
CTGGTTTACACTCTTGCTGG+AGG - chr2_1:19103926-19103945 Msa0199730:three_prime_UTR 50.0%
TATGCTGCCTTAGAAGGCCT+TGG - chr2_1:19104140-19104159 Msa0199730:intron 50.0%
ATGCTGCCTTAGAAGGCCTT+GGG - chr2_1:19104141-19104160 Msa0199730:intron 50.0%
! GCAGGGCAAACATTTTCGCA+AGG + chr2_1:19104373-19104392 None:intergenic 50.0%
!! GTTATAACGGAGCGCTGCTA+TGG - chr2_1:19104583-19104602 Msa0199730:intron 50.0%
! AAGCCTCGGTTTTCACTCCT+TGG - chr2_1:19104920-19104939 Msa0199730:intron 50.0%
TCTCCAAGGAGTGAAAACCG+AGG + chr2_1:19104926-19104945 None:intergenic 50.0%
CAGTCTACTCTGCCTGTAGA+AGG + chr2_1:19105008-19105027 None:intergenic 50.0%
!! GAGGTTGAAGGCACCACTTA+CGG + chr2_1:19105086-19105105 None:intergenic 50.0%
CGTCCGATGAGTGGAGATAT+TGG - chr2_1:19105431-19105450 Msa0199730:intron 50.0%
GCAGGCTTTCTTCAACTTGC+TGG - chr2_1:19105858-19105877 Msa0199730:CDS 50.0%
!! GGCTTTCTTCAACTTGCTGG+TGG - chr2_1:19105861-19105880 Msa0199730:CDS 50.0%
TCCATGCAATCCCAACATGG+TGG - chr2_1:19106326-19106345 Msa0199730:CDS 50.0%
TCCACCATGTTGGGATTGCA+TGG + chr2_1:19106330-19106349 None:intergenic 50.0%
TGAAGCAGCTCCACCATGTT+GGG + chr2_1:19106339-19106358 None:intergenic 50.0%
TTGAAGCAGCTCCACCATGT+TGG + chr2_1:19106340-19106359 None:intergenic 50.0%
!! AGGGAAGCACTTGCTTTGGT+TGG - chr2_1:19106395-19106414 Msa0199730:intron 50.0%
CCATCAAACGGGTCCTGTGA+AGG + chr2_1:19105562-19105581 None:intergenic 55.0%
CCTTCACAGGACCCGTTTGA+TGG - chr2_1:19105559-19105578 Msa0199730:intron 55.0%
TGAAGGCCTGTTCGATGGTC+AGG + chr2_1:19105790-19105809 None:intergenic 55.0%
TGACCATCGAACAGGCCTTC+AGG - chr2_1:19105789-19105808 Msa0199730:intron 55.0%
GACCATCGAACAGGCCTTCA+GGG - chr2_1:19105790-19105809 Msa0199730:intron 55.0%
AACCCTGAAGGCCTGTTCGA+TGG + chr2_1:19105795-19105814 None:intergenic 55.0%
! CAAGGGCGTGAACAGTCCTC+AGG + chr2_1:19104355-19104374 None:intergenic 60.0%
TTAGACGGCCGTCCGATGAG+TGG - chr2_1:19105422-19105441 Msa0199730:CDS 60.0%
!! ACGGAGCGCTGCTATGGCTG+TGG - chr2_1:19104589-19104608 Msa0199730:intron 65.0%
TTATGGCGGCTACGCGCGCA+AGG - chr2_1:19106115-19106134 Msa0199730:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 19103926 19106532 19103926 ID=Msa0199730;Name=Msa0199730
chr2_1 mRNA 19103926 19106532 19103926 ID=Msa0199730-mRNA-1;Parent=Msa0199730;Name=Msa0199730-mRNA-1;_AED=0.40;_eAED=0.56;_QI=0|0|0.12|0.87|1|1|8|96|260
chr2_1 exon 19103926 19104153 19103926 ID=Msa0199730-mRNA-1:exon:8005;Parent=Msa0199730-mRNA-1
chr2_1 exon 19105147 19105242 19105147 ID=Msa0199730-mRNA-1:exon:8004;Parent=Msa0199730-mRNA-1
chr2_1 exon 19105374 19105443 19105374 ID=Msa0199730-mRNA-1:exon:8003;Parent=Msa0199730-mRNA-1
chr2_1 exon 19105629 19105719 19105629 ID=Msa0199730-mRNA-1:exon:8002;Parent=Msa0199730-mRNA-1
chr2_1 exon 19105812 19105881 19105812 ID=Msa0199730-mRNA-1:exon:8001;Parent=Msa0199730-mRNA-1
chr2_1 exon 19105990 19106114 19105990 ID=Msa0199730-mRNA-1:exon:8000;Parent=Msa0199730-mRNA-1
chr2_1 exon 19106202 19106378 19106202 ID=Msa0199730-mRNA-1:exon:7999;Parent=Msa0199730-mRNA-1
chr2_1 exon 19106511 19106532 19106511 ID=Msa0199730-mRNA-1:exon:7998;Parent=Msa0199730-mRNA-1
chr2_1 CDS 19106511 19106532 19106511 ID=Msa0199730-mRNA-1:cds;Parent=Msa0199730-mRNA-1
chr2_1 CDS 19106202 19106378 19106202 ID=Msa0199730-mRNA-1:cds;Parent=Msa0199730-mRNA-1
chr2_1 CDS 19105990 19106114 19105990 ID=Msa0199730-mRNA-1:cds;Parent=Msa0199730-mRNA-1
chr2_1 CDS 19105812 19105881 19105812 ID=Msa0199730-mRNA-1:cds;Parent=Msa0199730-mRNA-1
chr2_1 CDS 19105629 19105719 19105629 ID=Msa0199730-mRNA-1:cds;Parent=Msa0199730-mRNA-1
chr2_1 CDS 19105374 19105443 19105374 ID=Msa0199730-mRNA-1:cds;Parent=Msa0199730-mRNA-1
chr2_1 CDS 19105147 19105242 19105147 ID=Msa0199730-mRNA-1:cds;Parent=Msa0199730-mRNA-1
chr2_1 CDS 19104022 19104153 19104022 ID=Msa0199730-mRNA-1:cds;Parent=Msa0199730-mRNA-1
chr2_1 three_prime_UTR 19103926 19104021 19103926 ID=Msa0199730-mRNA-1:three_prime_utr;Parent=Msa0199730-mRNA-1
Gene Sequence

>Msa0199730

CTGGTTTACACTCTTGCTGGAGCTGCTGATGCATCTGTTGTGAGTGCTGTGAATGAAGGAATTGAAGTGGCAAGAGACATCTTATGCTGCCTTAGAAGGCCTTGGGTTATGATCAGTGCCAATGATGATCGCAAAGCCTGTAAGACAGTTCTTATTGAACTTAATTGTTCCATACATCACACGTCAGCATACATCAGAAAATTTGATCCTGAGGACTGTTCACGCCCTTGCGAAAATGTTTGCCCTGCTAATGCAATCTCATTCCAAGAGAAATCTACTTCACAAATTTCATGTAGTACCGAAACACCAACAAGAGTACTAAAGGACGGAGTTATAACGGAGCGCTGCTATGGCTGTGGTCGCTGTCTTCCAGTTTGCCCCTACGATAAAATAAGAGAGGTAACATATGTAAGAGATGCTGTTACAACTTCTGATCTCATCAAGAGAAATGATGTTGATGCTATTGAGATCCATACAAGTGCAAGGCAGAGTAGACTGTTTGAAGAACTATGGAGCGCTTTAGGAGATTCAGTAAAAAAATTGAAGCTATTAGCCGTTAGTTTACCTAATGTTGGAGATTCAACAATATCTTCTATGAACAAAATGTTCTCTATTATGAAACCAAATCTTAGAAACTTCAACTTATGGCAGAATGTTGGTAGAGTATTGAGATCCATGCAATCCCAACATGGTGGAGCTGCTTCAATTGAAGATCATCCTGAGCATCTCTTATTGGCTCTAAGGGAAGCACTTGCTTTGGTTGGACCTGTTAAATGTCTATAA

Protein sequence

>Msa0199730

LVYTLAGAADASVVSAVNEGIEVARDILCCLRRPWVMISANDDRKACKTVLIELNCSIHHTSAYIRKFDPEDCSRPCENVCPANAISFQEKSTSQISCSTETPTRVLKDGVITERCYGCGRCLPVCPYDKIREVTYVRDAVTTSDLIKRNDVDAIEIHTSARQSRLFEELWSALGDSVKKLKLLAVSLPNVGDSTISSMNKMFSIMKPNLRNFNLWQNVGRVLRSMQSQHGGAASIEDHPEHLLLALREALALVGPVKCL*