Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0247890 | XP_013463763.1 | 88.426 | 216 | 1 | 1 | 1 | 192 | 1 | 216 | 1.15e-126 | 365 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0247890 | sp|Q0WTY4|VPS2B_ARATH | 74.324 | 222 | 27 | 2 | 1 | 192 | 1 | 222 | 2.31e-106 | 307 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0247890 | B7FHD8 | 88.426 | 216 | 1 | 1 | 1 | 192 | 1 | 216 | 5.50e-127 | 365 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0247890 | 0.800270 | 1.559236e-48 | -8.615850e-47 |
| Msa0001940 | Msa0247890 | 0.815159 | 1.066552e-51 | -8.615850e-47 |
| Msa0005890 | Msa0247890 | 0.805530 | 1.276875e-49 | -8.615850e-47 |
| Msa0017950 | Msa0247890 | 0.811297 | 7.512865e-51 | -8.615850e-47 |
| Msa0054690 | Msa0247890 | 0.829275 | 5.639176e-55 | -8.615850e-47 |
| Msa0077340 | Msa0247890 | 0.832482 | 9.219021e-56 | -8.615850e-47 |
| Msa0081520 | Msa0247890 | 0.826547 | 2.555911e-54 | -8.615850e-47 |
| Msa0094780 | Msa0247890 | 0.805184 | 1.508856e-49 | -8.615850e-47 |
| Msa0098040 | Msa0247890 | 0.803045 | 4.203573e-49 | -8.615850e-47 |
| Msa0123070 | Msa0247890 | 0.802072 | 6.672325e-49 | -8.615850e-47 |
| Msa0125360 | Msa0247890 | 0.824105 | 9.666719e-54 | -8.615850e-47 |
| Msa0136650 | Msa0247890 | 0.837119 | 6.272777e-57 | -8.615850e-47 |
| Msa0173890 | Msa0247890 | 0.813691 | 2.251783e-51 | -8.615850e-47 |
| Msa0174450 | Msa0247890 | 0.829307 | 5.538791e-55 | -8.615850e-47 |
| Msa0190570 | Msa0247890 | 0.817728 | 2.837066e-52 | -8.615850e-47 |
| Msa0221000 | Msa0247890 | 0.840454 | 8.609923e-58 | -8.615850e-47 |
| Msa0225860 | Msa0247890 | 0.818932 | 1.513783e-52 | -8.615850e-47 |
| Msa0247890 | Msa0247940 | 0.905447 | 4.251978e-80 | -8.615850e-47 |
| Msa0247890 | Msa0263080 | 0.810907 | 9.124421e-51 | -8.615850e-47 |
| Msa0247890 | Msa0298470 | 0.812455 | 4.202421e-51 | -8.615850e-47 |
| Msa0247890 | Msa0300270 | 0.825348 | 4.924220e-54 | -8.615850e-47 |
| Msa0247890 | Msa0300320 | 0.849060 | 4.120782e-60 | -8.615850e-47 |
| Msa0247890 | Msa0307270 | 0.819903 | 9.092634e-53 | -8.615850e-47 |
| Msa0247890 | Msa0310850 | 0.801621 | 8.260275e-49 | -8.615850e-47 |
| Msa0247890 | Msa0330380 | 0.817175 | 3.779654e-52 | -8.615850e-47 |
| Msa0247890 | Msa0337700 | 0.826902 | 2.102439e-54 | -8.615850e-47 |
| Msa0247890 | Msa0338210 | 0.800807 | 1.212042e-48 | -8.615850e-47 |
| Msa0247890 | Msa0339500 | 0.829239 | 5.753410e-55 | -8.615850e-47 |
| Msa0247890 | Msa0340500 | 0.811160 | 8.046207e-51 | -8.615850e-47 |
| Msa0247890 | Msa0341690 | 0.806382 | 8.453367e-50 | -8.615850e-47 |
| Msa0247890 | Msa0361910 | 0.832105 | 1.143041e-55 | -8.615850e-47 |
| Msa0247890 | Msa0375640 | 0.802912 | 4.477980e-49 | -8.615850e-47 |
| Msa0247890 | Msa0378720 | 0.830123 | 3.505727e-55 | -8.615850e-47 |
| Msa0247890 | Msa0380620 | 0.832801 | 7.683251e-56 | -8.615850e-47 |
| Msa0247890 | Msa0405710 | 0.800472 | 1.418098e-48 | -8.615850e-47 |
| Msa0247890 | Msa0419540 | 0.802073 | 6.669763e-49 | -8.615850e-47 |
| Msa0247890 | Msa0424160 | 0.807361 | 5.248666e-50 | -8.615850e-47 |
| Msa0247890 | Msa0428370 | 0.814838 | 1.256269e-51 | -8.615850e-47 |
| Msa0247890 | Msa0430260 | 0.843357 | 1.472678e-58 | -8.615850e-47 |
| Msa0247890 | Msa0453040 | 0.810518 | 1.107909e-50 | -8.615850e-47 |
| Msa0247890 | Msa0474730 | 0.831578 | 1.542119e-55 | -8.615850e-47 |
| Msa0247890 | Msa0500380 | 0.829582 | 4.748519e-55 | -8.615850e-47 |
| Msa0247890 | Msa0515800 | 0.812690 | 3.734390e-51 | -8.615850e-47 |
| Msa0247890 | Msa0529030 | 0.837650 | 4.586653e-57 | -8.615850e-47 |
| Msa0247890 | Msa0548470 | 0.803433 | 3.494980e-49 | -8.615850e-47 |
| Msa0247890 | Msa0556640 | 0.815995 | 6.947726e-52 | -8.615850e-47 |
| Msa0247890 | Msa0567170 | 0.814468 | 1.517627e-51 | -8.615850e-47 |
| Msa0247890 | Msa0580370 | 0.845446 | 4.040636e-59 | -8.615850e-47 |
| Msa0247890 | Msa0581470 | 0.813558 | 2.408478e-51 | -8.615850e-47 |
| Msa0247890 | Msa0597790 | 0.837114 | 6.291716e-57 | -8.615850e-47 |
| Msa0247890 | Msa0611210 | 0.802423 | 5.651296e-49 | -8.615850e-47 |
| Msa0247890 | Msa0624900 | 0.835500 | 1.618146e-56 | -8.615850e-47 |
| Msa0247890 | Msa0626450 | 0.810278 | 1.248270e-50 | -8.615850e-47 |
| Msa0247890 | Msa0626490 | 0.809399 | 1.929391e-50 | -8.615850e-47 |
| Msa0247890 | Msa0638480 | 0.815193 | 1.048032e-51 | -8.615850e-47 |
| Msa0247890 | Msa0651550 | 0.808734 | 2.678161e-50 | -8.615850e-47 |
| Msa0247890 | Msa0658640 | 0.831220 | 1.888266e-55 | -8.615850e-47 |
| Msa0247890 | Msa0660370 | 0.809416 | 1.913065e-50 | -8.615850e-47 |
| Msa0247890 | Msa0664600 | 0.812505 | 4.098625e-51 | -8.615850e-47 |
| Msa0247890 | Msa0697160 | 0.808267 | 3.367948e-50 | -8.615850e-47 |
| Msa0247890 | Msa0703600 | 0.805022 | 1.630990e-49 | -8.615850e-47 |
| Msa0247890 | Msa0709200 | 0.805029 | 1.625491e-49 | -8.615850e-47 |
| Msa0247890 | Msa0735780 | 0.826931 | 2.068717e-54 | -8.615850e-47 |
| Msa0247890 | Msa0768990 | 0.814188 | 1.749208e-51 | -8.615850e-47 |
| Msa0247890 | Msa0770330 | 0.807473 | 4.969524e-50 | -8.615850e-47 |
| Msa0247890 | Msa0795870 | 0.854529 | 1.158629e-61 | -8.615850e-47 |
| Msa0247890 | Msa0824450 | 0.819599 | 1.067491e-52 | -8.615850e-47 |
| Msa0247890 | Msa0833650 | 0.845320 | 4.369918e-59 | -8.615850e-47 |
| Msa0247890 | Msa0861510 | 0.822028 | 2.948654e-53 | -8.615850e-47 |
| Msa0247890 | Msa0861600 | 0.829396 | 5.269404e-55 | -8.615850e-47 |
| Msa0247890 | Msa0869780 | 0.803613 | 3.206086e-49 | -8.615850e-47 |
| Msa0247890 | Msa0878280 | 0.807902 | 4.028278e-50 | -8.615850e-47 |
| Msa0247890 | Msa0880270 | 0.800123 | 1.670663e-48 | -8.615850e-47 |
| Msa0247890 | Msa1000920 | 0.823666 | 1.224750e-53 | -8.615850e-47 |
| Msa0247890 | Msa1011530 | 0.811886 | 5.592925e-51 | -8.615850e-47 |
| Msa0247890 | Msa1020480 | 0.809501 | 1.833827e-50 | -8.615850e-47 |
| Msa0247890 | Msa1051900 | 0.805000 | 1.648374e-49 | -8.615850e-47 |
| Msa0247890 | Msa1072940 | 0.811096 | 8.303399e-51 | -8.615850e-47 |
| Msa0247890 | Msa1079230 | 0.817856 | 2.653701e-52 | -8.615850e-47 |
| Msa0247890 | Msa1085330 | 0.824917 | 6.225522e-54 | -8.615850e-47 |
| Msa0247890 | Msa1103990 | 0.801237 | 9.898667e-49 | -8.615850e-47 |
| Msa0247890 | Msa1124110 | 0.821181 | 4.626938e-53 | -8.615850e-47 |
| Msa0247890 | Msa1132840 | 0.846379 | 2.253625e-59 | -8.615850e-47 |
| Msa0247890 | Msa1145580 | 0.802175 | 6.356142e-49 | -8.615850e-47 |
| Msa0247890 | Msa1157870 | 0.809408 | 1.920043e-50 | -8.615850e-47 |
| Msa0247890 | Msa1160920 | 0.825526 | 4.468583e-54 | -8.615850e-47 |
| Msa0247890 | Msa1168950 | 0.809856 | 1.538960e-50 | -8.615850e-47 |
| Msa0247890 | Msa1169040 | 0.804357 | 2.245707e-49 | -8.615850e-47 |
| Msa0247890 | Msa1186020 | 0.804769 | 1.842837e-49 | -8.615850e-47 |
| Msa0247890 | Msa1200890 | 0.853525 | 2.255764e-61 | -8.615850e-47 |
| Msa0247890 | Msa1215870 | 0.806788 | 6.937740e-50 | -8.615850e-47 |
| Msa0247890 | Msa1226520 | 0.830029 | 3.696476e-55 | -8.615850e-47 |
| Msa0247890 | Msa1253550 | 0.818124 | 2.309284e-52 | -8.615850e-47 |
| Msa0247890 | Msa1268240 | 0.802850 | 4.612308e-49 | -8.615850e-47 |
| Msa0247890 | Msa1297230 | 0.802532 | 5.366177e-49 | -8.615850e-47 |
| Msa0247890 | Msa1307630 | 0.810552 | 1.088895e-50 | -8.615850e-47 |
| Msa0247890 | Msa1320670 | 0.801084 | 1.063640e-48 | -8.615850e-47 |
| Msa0247890 | Msa1330420 | 0.800403 | 1.465206e-48 | -8.615850e-47 |
| Msa0247890 | Msa1330450 | 0.810948 | 8.942566e-51 | -8.615850e-47 |
| Msa0247890 | Msa1343180 | 0.815715 | 8.021453e-52 | -8.615850e-47 |
| Msa0247890 | Msa1348090 | 0.840751 | 7.199479e-58 | -8.615850e-47 |
| Msa0247890 | Msa1356830 | 0.802578 | 5.249712e-49 | -8.615850e-47 |
| Msa0247890 | Msa1359690 | 0.820875 | 5.443888e-53 | -8.615850e-47 |
| Msa0247890 | Msa1369150 | 0.805283 | 1.438550e-49 | -8.615850e-47 |
| Msa0247890 | Msa1373100 | 0.800927 | 1.145481e-48 | -8.615850e-47 |
| Msa0247890 | Msa1375280 | 0.804510 | 2.086449e-49 | -8.615850e-47 |
| Msa0247890 | Msa1392580 | 0.802109 | 6.557637e-49 | -8.615850e-47 |
| Msa0247890 | Msa1405460 | 0.835840 | 1.327355e-56 | -8.615850e-47 |
| Msa0247890 | Msa1422950 | 0.800653 | 1.303119e-48 | -8.615850e-47 |
| Msa0247890 | Msa1437940 | 0.807705 | 4.437117e-50 | -8.615850e-47 |
| Msa0247890 | Msa1440880 | 0.813740 | 2.196783e-51 | -8.615850e-47 |
| Msa0247890 | Msa1440960 | 0.802759 | 4.816323e-49 | -8.615850e-47 |
| Msa0247890 | Msa1446810 | 0.823635 | 1.245447e-53 | -8.615850e-47 |
| Msa0247890 | Msa1451160 | 0.800275 | 1.555743e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0247890 | MtrunA17_Chr2g0303251 | 88.426 | 216 | 1 | 1 | 1 | 192 | 1 | 216 | 1.06e-130 | 365 |
| Msa0247890 | MtrunA17_Chr1g0183621 | 64.019 | 214 | 49 | 2 | 1 | 190 | 5 | 214 | 1.67e-92 | 269 |
| Msa0247890 | MtrunA17_Chr7g0261511 | 67.290 | 214 | 42 | 2 | 1 | 190 | 1 | 210 | 2.63e-82 | 243 |
| Msa0247890 | MtrunA17_Chr2g0300321 | 37.727 | 220 | 107 | 2 | 3 | 192 | 4 | 223 | 8.36e-31 | 112 |
| Msa0247890 | MtrunA17_Chr8g0343561 | 36.158 | 177 | 87 | 2 | 3 | 154 | 4 | 179 | 4.93e-28 | 104 |
| Msa0247890 | MtrunA17_Chr4g0028231 | 27.928 | 222 | 128 | 3 | 1 | 190 | 5 | 226 | 1.18e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0247890 | AT5G44560.1 | 74.324 | 222 | 27 | 2 | 1 | 192 | 1 | 222 | 2.34e-107 | 307 |
| Msa0247890 | AT5G44560.2 | 72.772 | 202 | 25 | 2 | 21 | 192 | 1 | 202 | 5.66e-93 | 270 |
| Msa0247890 | AT5G44560.4 | 76.966 | 178 | 17 | 1 | 1 | 154 | 1 | 178 | 6.68e-92 | 266 |
| Msa0247890 | AT1G03950.1 | 63.084 | 214 | 51 | 2 | 1 | 190 | 1 | 210 | 3.19e-90 | 263 |
| Msa0247890 | AT5G44560.3 | 90.351 | 114 | 11 | 0 | 1 | 114 | 1 | 114 | 2.34e-70 | 211 |
| Msa0247890 | AT2G06530.1 | 37.946 | 224 | 107 | 4 | 1 | 192 | 2 | 225 | 1.54e-33 | 119 |
| Msa0247890 | AT2G06530.2 | 36.500 | 200 | 96 | 3 | 24 | 192 | 5 | 204 | 2.56e-26 | 100 |
| Msa0247890 | AT5G22950.1 | 27.679 | 224 | 128 | 4 | 1 | 190 | 5 | 228 | 6.04e-11 | 60.1 |
Find 67 sgRNAs with CRISPR-Local
Find 374 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACAGGTTCTTGATGAAAT+TGG | 0.228952 | 2_2:-30753492 | Msa0247890:intron |
| CACTGTCCAAATTGTGAAAA+TGG | 0.244222 | 2_2:-30752594 | Msa0247890:three_prime_UTR |
| CATTGCCACCATTGCTTTAG+TGG | 0.261194 | 2_2:+30755346 | None:intergenic |
| TCTCTGCTTCAATTAGGTTT+TGG | 0.272018 | 2_2:-30758646 | Msa0247890:five_prime_UTR |
| TAACATTCTCTGCTTCAATT+AGG | 0.278991 | 2_2:-30758652 | Msa0247890:five_prime_UTR |
| AATTCTGCGTTTGTTTGTTT+AGG | 0.295849 | 2_2:-30752827 | Msa0247890:three_prime_UTR |
| TTTCAAGTTCTTCAACATCT+TGG | 0.321093 | 2_2:+30753047 | None:intergenic |
| AGCAATGGTGGCAATGAATA+AGG | 0.349876 | 2_2:-30755339 | Msa0247890:intron |
| TTCAAGTTCTTCAACATCTT+GGG | 0.356079 | 2_2:+30753048 | None:intergenic |
| GCCACTTGAAACATTTAGTT+AGG | 0.365262 | 2_2:+30752774 | None:intergenic |
| CAACAATAAGATTGTATTAA+CGG | 0.374997 | 2_2:-30752940 | Msa0247890:three_prime_UTR |
| CTCTCTGCACACAGATTTAG+TGG | 0.380531 | 2_2:-30758688 | Msa0247890:intron |
| AGGGAAGTCGTGCACAGATC+AGG | 0.381377 | 2_2:-30755514 | Msa0247890:CDS |
| CTTGAAGCAATCCGACCTTT+CGG | 0.382816 | 2_2:+30753199 | None:intergenic |
| AGAGAAAAGACCTTGGGCTT+GGG | 0.388620 | 2_2:+30758839 | None:intergenic |
| TGAAGAACTTGAAAAGAGAT+TGG | 0.400428 | 2_2:-30753038 | Msa0247890:CDS |
| TCCTGGCTCGGCAGCTAGTT+AGG | 0.403556 | 2_2:-30755562 | Msa0247890:CDS |
| AAGAGAAAAGACCTTGGGCT+TGG | 0.425598 | 2_2:+30758838 | None:intergenic |
| GCAAGCACTTCAATCTCTAC+AGG | 0.426499 | 2_2:-30755380 | Msa0247890:CDS |
| CGAAAGGTCGGATTGCTTCA+AGG | 0.442942 | 2_2:-30753198 | Msa0247890:CDS |
| GTACCGCGGGCACCTGCATA+AGG | 0.457143 | 2_2:-30752688 | Msa0247890:three_prime_UTR |
| TTCAATCTCTACAGGGATGA+AGG | 0.458265 | 2_2:-30755372 | Msa0247890:CDS |
| TAGATATAAAGTATAGTTGT+GGG | 0.461951 | 2_2:-30752882 | Msa0247890:three_prime_UTR |
| GAGCTCTTCTGATTCTTCCT+CGG | 0.474103 | 2_2:+30753613 | None:intergenic |
| TGGAGTGGATATTGCATCCC+AGG | 0.474380 | 2_2:-30753472 | Msa0247890:intron |
| CCTGCAGATTGGTTATCTGT+TGG | 0.475119 | 2_2:+30755534 | None:intergenic |
| AGAGAATTTATTTGCAGCAA+AGG | 0.477800 | 2_2:-30752633 | Msa0247890:three_prime_UTR |
| TGCACGACTTCCCTGCAGAT+TGG | 0.480689 | 2_2:+30755523 | None:intergenic |
| TGGCAGTAAATAAGCCAATT+CGG | 0.482655 | 2_2:-30752755 | Msa0247890:three_prime_UTR |
| ACCTAACTAGCTGCCGAGCC+AGG | 0.485867 | 2_2:+30755561 | None:intergenic |
| GCATCTAGTACCGACCGAAT+TGG | 0.499645 | 2_2:+30752741 | None:intergenic |
| ATATCTATCAACAGCTGTTG+TGG | 0.514661 | 2_2:+30752991 | None:intergenic |
| GAGAAAAGACCTTGGGCTTG+GGG | 0.519987 | 2_2:+30758840 | None:intergenic |
| GGGAAGTCGTGCACAGATCA+GGG | 0.524632 | 2_2:-30755513 | Msa0247890:CDS |
| TGATCTCTTACACCTTATGC+AGG | 0.533086 | 2_2:+30752676 | None:intergenic |
| CCAACAGATAACCAATCTGC+AGG | 0.534723 | 2_2:-30755534 | Msa0247890:CDS |
| ACAGGCTTCTACTAAAATCC+TGG | 0.535270 | 2_2:-30755579 | Msa0247890:intron |
| GATGAACGAACCTTTGGGTG+TGG | 0.536929 | 2_2:+30758589 | None:intergenic |
| AGAGATAGCATCGCTTCAGA+TGG | 0.553224 | 2_2:-30757377 | Msa0247890:CDS |
| TTGAATTCTATCCGTACCGC+GGG | 0.555742 | 2_2:-30752701 | Msa0247890:three_prime_UTR |
| TCTACTGCAGGAAAAGAAGT+TGG | 0.557018 | 2_2:-30757275 | Msa0247890:intron |
| TTAGATATAAAGTATAGTTG+TGG | 0.558039 | 2_2:-30752883 | Msa0247890:three_prime_UTR |
| ATCAGAAGAGCTCACTAACC+AGG | 0.569710 | 2_2:-30753603 | Msa0247890:intron |
| ATATAATCAGTAACAAAATG+AGG | 0.575315 | 2_2:+30752915 | None:intergenic |
| TCAATCTCTACAGGGATGAA+GGG | 0.583879 | 2_2:-30755371 | Msa0247890:CDS |
| TATCTTCTGCTCCGAAAGGT+CGG | 0.586806 | 2_2:-30753210 | Msa0247890:CDS |
| TAGTTATCTTCTGCTCCGAA+AGG | 0.588512 | 2_2:-30753214 | Msa0247890:CDS |
| TTATGCAGGTGCCCGCGGTA+CGG | 0.594541 | 2_2:+30752690 | None:intergenic |
| TCCTAACTAAATGTTTCAAG+TGG | 0.596759 | 2_2:-30752775 | Msa0247890:three_prime_UTR |
| GGTGGCAGAGATTAAAAGAG+AGG | 0.597698 | 2_2:-30757254 | Msa0247890:CDS |
| CTTCTACTAAAATCCTGGCT+CGG | 0.598970 | 2_2:-30755574 | Msa0247890:CDS |
| GATAGCATCGCTTCAGATGG+AGG | 0.601008 | 2_2:-30757374 | Msa0247890:intron |
| GGTTCTTGATGAAATTGGAG+TGG | 0.601589 | 2_2:-30753487 | Msa0247890:CDS |
| CAAGCACTTCAATCTCTACA+GGG | 0.614124 | 2_2:-30755379 | Msa0247890:CDS |
| ACTGCAGGAAAAGAAGTTGG+TGG | 0.614215 | 2_2:-30757272 | Msa0247890:intron |
| AGAAAAGACCTTGGGCTTGG+GGG | 0.618907 | 2_2:+30758841 | None:intergenic |
| GTTGAATTCTATCCGTACCG+CGG | 0.620027 | 2_2:-30752702 | Msa0247890:three_prime_UTR |
| AAGAAGAAAACCACACCCAA+AGG | 0.621044 | 2_2:-30758599 | Msa0247890:intron |
| GGGTGCCACTAAAGCAATGG+TGG | 0.624027 | 2_2:-30755351 | Msa0247890:CDS |
| GAAGGGTGCCACTAAAGCAA+TGG | 0.625367 | 2_2:-30755354 | Msa0247890:CDS |
| AGTAAATAAGCCAATTCGGT+CGG | 0.630638 | 2_2:-30752751 | Msa0247890:three_prime_UTR |
| ACACCTTATGCAGGTGCCCG+CGG | 0.633532 | 2_2:+30752685 | None:intergenic |
| TTTAGACAAAGATGAAGCCG+AGG | 0.646262 | 2_2:-30753630 | Msa0247890:CDS |
| GAAATGTCTGTAGCAACTAG+AGG | 0.650936 | 2_2:-30758404 | Msa0247890:intron |
| GGAAGTCGTGCACAGATCAG+GGG | 0.664483 | 2_2:-30755512 | Msa0247890:CDS |
| GGGTGTAGCAACTCACACAC+AGG | 0.671175 | 2_2:-30755492 | Msa0247890:intron |
| CAACAGATAACCAATCTGCA+GGG | 0.679379 | 2_2:-30755533 | Msa0247890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTCATATATAAAATCAAA+TGG | + | chr2_2:30753348-30753367 | None:intergenic | 10.0% |
| !! | AATATATAACCAAAAGAAAA+AGG | + | chr2_2:30753237-30753256 | None:intergenic | 15.0% |
| !!! | ATTTTTTTCCTATTTAGAAA+GGG | + | chr2_2:30753408-30753427 | None:intergenic | 15.0% |
| !!! | AATTTTTTTCCTATTTAGAA+AGG | + | chr2_2:30753409-30753428 | None:intergenic | 15.0% |
| !!! | ATTTTTTGATTTTAATGAAG+TGG | - | chr2_2:30753944-30753963 | Msa0247890:intron | 15.0% |
| !! | TAAATAAATAGATTTCTAAC+TGG | + | chr2_2:30755637-30755656 | None:intergenic | 15.0% |
| !! | TAATTGTAAATAATAAGCAA+CGG | - | chr2_2:30757013-30757032 | Msa0247890:intron | 15.0% |
| !! | TATAAGAACTAAAATAAGTA+AGG | - | chr2_2:30757301-30757320 | Msa0247890:intron | 15.0% |
| !! | ATAAGAACTAAAATAAGTAA+GGG | - | chr2_2:30757302-30757321 | Msa0247890:intron | 15.0% |
| !! | AAATATATAATCTAATGCTA+TGG | + | chr2_2:30757659-30757678 | None:intergenic | 15.0% |
| !! | AACTAACATAATGAAATATT+GGG | + | chr2_2:30758028-30758047 | None:intergenic | 15.0% |
| !! | TAACTAACATAATGAAATAT+TGG | + | chr2_2:30758029-30758048 | None:intergenic | 15.0% |
| !! | TTTACTTGTATAATTTCTGA+AGG | - | chr2_2:30753159-30753178 | Msa0247890:intron | 20.0% |
| !!! | TTCTTTTGGTTATATATTTC+TGG | - | chr2_2:30753239-30753258 | Msa0247890:intron | 20.0% |
| !!! | ATTTTTTACCCTTTCTAAAT+AGG | - | chr2_2:30753397-30753416 | Msa0247890:intron | 20.0% |
| !!! | TTAGATGTTTTCATCTTAAT+TGG | - | chr2_2:30754293-30754312 | Msa0247890:intron | 20.0% |
| !!! | TAGATGTTTTCATCTTAATT+GGG | - | chr2_2:30754294-30754313 | Msa0247890:intron | 20.0% |
| !! | ACTATAGTTAAAGATTGTAT+TGG | + | chr2_2:30754750-30754769 | None:intergenic | 20.0% |
| !! | AAAAATTGAATTTCAAGCTA+TGG | + | chr2_2:30754792-30754811 | None:intergenic | 20.0% |
| !! | TCATTATCAAAATTCATGAA+TGG | + | chr2_2:30755038-30755057 | None:intergenic | 20.0% |
| !! | ATTTAGAGGAGAATTATATA+GGG | + | chr2_2:30755404-30755423 | None:intergenic | 20.0% |
| !!! | TAATGATTTCTTTTTGCAAA+AGG | + | chr2_2:30755594-30755613 | None:intergenic | 20.0% |
| !!! | TACATTGTTGTCTTTATTTT+TGG | - | chr2_2:30755698-30755717 | Msa0247890:intron | 20.0% |
| !!! | AATTTCCAAATTTCTTTTGT+AGG | - | chr2_2:30756052-30756071 | Msa0247890:intron | 20.0% |
| !!! | AATGAATAAGGTATATTTTC+TGG | - | chr2_2:30756136-30756155 | Msa0247890:intron | 20.0% |
| !!! | ATGAATAAGGTATATTTTCT+GGG | - | chr2_2:30756137-30756156 | Msa0247890:intron | 20.0% |
| !!! | ATTACCAAAATTTTGAACAA+TGG | + | chr2_2:30756176-30756195 | None:intergenic | 20.0% |
| !! | TTAAGTTACTCTTAACATAT+GGG | + | chr2_2:30756292-30756311 | None:intergenic | 20.0% |
| !! | ATATTTATGATTTCTATCCA+TGG | - | chr2_2:30756343-30756362 | Msa0247890:intron | 20.0% |
| !! | ATAAACTAGGAGTTAAATAA+AGG | - | chr2_2:30756981-30757000 | Msa0247890:intron | 20.0% |
| !! | AATTGACAAGTGTAATAAAA+GGG | + | chr2_2:30757559-30757578 | None:intergenic | 20.0% |
| !! | TAATTGACAAGTGTAATAAA+AGG | + | chr2_2:30757560-30757579 | None:intergenic | 20.0% |
| !!! | CGGATAACATTATAAATTTT+TGG | + | chr2_2:30757689-30757708 | None:intergenic | 20.0% |
| !! | ATTACGATAACATAAATTGT+TGG | + | chr2_2:30757777-30757796 | None:intergenic | 20.0% |
| !! | TAAGTTTATCAAATAGTTCA+TGG | - | chr2_2:30758088-30758107 | Msa0247890:intron | 20.0% |
| !!! | TTAATTACTTTTACGAGTAT+TGG | - | chr2_2:30758195-30758214 | Msa0247890:intron | 20.0% |
| !!! | TAATTACTTTTACGAGTATT+GGG | - | chr2_2:30758196-30758215 | Msa0247890:intron | 20.0% |
| !! | AAAAAGAAAAAAACAGAATC+AGG | + | chr2_2:30758222-30758241 | None:intergenic | 20.0% |
| !! | CAACAATAAGATTGTATTAA+CGG | - | chr2_2:30758523-30758542 | Msa0247890:intron | 20.0% |
| !! | ATATAATCAGTAACAAAATG+AGG | + | chr2_2:30758551-30758570 | None:intergenic | 20.0% |
| !! | TTAGATATAAAGTATAGTTG+TGG | - | chr2_2:30758580-30758599 | Msa0247890:intron | 20.0% |
| !! | TAGATATAAAGTATAGTTGT+GGG | - | chr2_2:30758581-30758600 | Msa0247890:intron | 20.0% |
| ! | TGTGAAAATCGTAAGATTTA+GGG | + | chr2_2:30752917-30752936 | None:intergenic | 25.0% |
| ! | ATGTGAAAATCGTAAGATTT+AGG | + | chr2_2:30752918-30752937 | None:intergenic | 25.0% |
| ! | AAAGAAAAAGGTAGAACAAA+AGG | + | chr2_2:30753225-30753244 | None:intergenic | 25.0% |
| !! | TTTGTTCTACCTTTTTCTTT+TGG | - | chr2_2:30753225-30753244 | Msa0247890:intron | 25.0% |
| ! | TTCTGTATGTTGTTAATGTT+TGG | - | chr2_2:30753581-30753600 | Msa0247890:intron | 25.0% |
| ! | ACACAAATAGTTAAAGTTGA+AGG | - | chr2_2:30753610-30753629 | Msa0247890:CDS | 25.0% |
| ! | CACAAATAGTTAAAGTTGAA+GGG | - | chr2_2:30753611-30753630 | Msa0247890:CDS | 25.0% |
| ! | ACAAATAGTTAAAGTTGAAG+GGG | - | chr2_2:30753612-30753631 | Msa0247890:CDS | 25.0% |
| ! | CATCAAATAAAAGGTGATAA+AGG | + | chr2_2:30754607-30754626 | None:intergenic | 25.0% |
| ! | ACAACACTTCATCAAATAAA+AGG | + | chr2_2:30754616-30754635 | None:intergenic | 25.0% |
| !! | ACATGTTCTTGATTTTCTTA+AGG | + | chr2_2:30755131-30755150 | None:intergenic | 25.0% |
| ! | AAAGCTAAAATACTTGTAGT+TGG | + | chr2_2:30755196-30755215 | None:intergenic | 25.0% |
| ! | GATTTAGAGGAGAATTATAT+AGG | + | chr2_2:30755405-30755424 | None:intergenic | 25.0% |
| !! | ATATTCAAAGCATTTCTTCA+TGG | + | chr2_2:30755429-30755448 | None:intergenic | 25.0% |
| !! | GTTTCTTTTTACAACTAGTT+TGG | - | chr2_2:30755547-30755566 | Msa0247890:CDS | 25.0% |
| !! | GGATGTTTATGATTGTTATT+AGG | + | chr2_2:30755573-30755592 | None:intergenic | 25.0% |
| ! | CAAAAAGAAATCATTATGCT+AGG | - | chr2_2:30755598-30755617 | Msa0247890:intron | 25.0% |
| ! | TAAATAGATTTCTAACTGGA+TGG | + | chr2_2:30755633-30755652 | None:intergenic | 25.0% |
| !!! | TGTCTTTATTTTTGGTTGAA+TGG | - | chr2_2:30755706-30755725 | Msa0247890:intron | 25.0% |
| !!! | TTTATTTTTGGTTGAATGGA+GGG | - | chr2_2:30755710-30755729 | Msa0247890:intron | 25.0% |
| !!! | TATTCTTCTTTGTTTTCAAG+AGG | - | chr2_2:30756005-30756024 | Msa0247890:intron | 25.0% |
| !!! | ATTCTTCTTTGTTTTCAAGA+GGG | - | chr2_2:30756006-30756025 | Msa0247890:intron | 25.0% |
| ! | TAATGCCTACAAAAGAAATT+TGG | + | chr2_2:30756060-30756079 | None:intergenic | 25.0% |
| !! | CTTTCCATTGTTCAAAATTT+TGG | - | chr2_2:30756169-30756188 | Msa0247890:intron | 25.0% |
| ! | GTTAAGTTACTCTTAACATA+TGG | + | chr2_2:30756293-30756312 | None:intergenic | 25.0% |
| ! | AAGAGTAACTTAACTTTCAT+AGG | - | chr2_2:30756299-30756318 | Msa0247890:intron | 25.0% |
| !!! | CTTTTAGAATTTGTTTGAGA+GGG | - | chr2_2:30756715-30756734 | Msa0247890:intron | 25.0% |
| !!! | TTTTAGAATTTGTTTGAGAG+GGG | - | chr2_2:30756716-30756735 | Msa0247890:intron | 25.0% |
| !! | CCTTCAATTATTTCTTTATC+TGG | + | chr2_2:30756954-30756973 | None:intergenic | 25.0% |
| ! | CCAGATAAAGAAATAATTGA+AGG | - | chr2_2:30756951-30756970 | Msa0247890:intron | 25.0% |
| !! | TTAGTTCTTATACTTTCGTT+TGG | + | chr2_2:30757293-30757312 | None:intergenic | 25.0% |
| !!! | ACATATTTTAAGCTACCAAA+AGG | - | chr2_2:30757357-30757376 | Msa0247890:intron | 25.0% |
| !!! | CATATTTTAAGCTACCAAAA+GGG | - | chr2_2:30757358-30757377 | Msa0247890:intron | 25.0% |
| !!! | ATATTTTAAGCTACCAAAAG+GGG | - | chr2_2:30757359-30757378 | Msa0247890:intron | 25.0% |
| ! | CAGAAAATATAGATGAAACT+TGG | - | chr2_2:30757730-30757749 | Msa0247890:intron | 25.0% |
| ! | ATGAAAATCAGATATGACAA+AGG | + | chr2_2:30757944-30757963 | None:intergenic | 25.0% |
| !! | GATTTTCATTTATTCATGAC+AGG | - | chr2_2:30757955-30757974 | Msa0247890:intron | 25.0% |
| ! | ATTTGATAAACTTAAGCCTT+GGG | + | chr2_2:30758082-30758101 | None:intergenic | 25.0% |
| ! | TATTTGATAAACTTAAGCCT+TGG | + | chr2_2:30758083-30758102 | None:intergenic | 25.0% |
| ! | AATAAGATTGGAGTTTACTT+TGG | + | chr2_2:30758309-30758328 | None:intergenic | 25.0% |
| TTTGTAAGAGAAAAGACCTT+GGG | + | chr2_2:30752633-30752652 | None:intergenic | 30.0% | |
| TAACATTCTCTGCTTCAATT+AGG | - | chr2_2:30752811-30752830 | Msa0247890:three_prime_UTR | 30.0% | |
| !! | TTATATATTTCTGGTAGTCC+AGG | - | chr2_2:30753248-30753267 | Msa0247890:intron | 30.0% |
| CTTTAATGTAACCAATGTGT+CGG | + | chr2_2:30753515-30753534 | None:intergenic | 30.0% | |
| CAAATAGTTAAAGTTGAAGG+GGG | - | chr2_2:30753613-30753632 | Msa0247890:CDS | 30.0% | |
| AAATAGTTAAAGTTGAAGGG+GGG | - | chr2_2:30753614-30753633 | Msa0247890:CDS | 30.0% | |
| TATGAGTTAGCAAAGCTTTA+TGG | - | chr2_2:30753804-30753823 | Msa0247890:intron | 30.0% | |
| TTCTTACTTCTGATGTTACA+AGG | - | chr2_2:30753984-30754003 | Msa0247890:intron | 30.0% | |
| ! | GCATAACTTTTCTTTCTTGT+AGG | - | chr2_2:30754054-30754073 | Msa0247890:intron | 30.0% |
| ATTAAAAGAGAGGCAAAAAC+TGG | - | chr2_2:30754219-30754238 | Msa0247890:intron | 30.0% | |
| TTCATCTTAATTGGGATCAA+AGG | - | chr2_2:30754302-30754321 | Msa0247890:intron | 30.0% | |
| GAATAAGTGTACGTTTGATT+CGG | - | chr2_2:30754405-30754424 | Msa0247890:intron | 30.0% | |
| CAGTTGAATTGTCATAATCA+CGG | - | chr2_2:30754428-30754447 | Msa0247890:intron | 30.0% | |
| ACATATTGGGAATGATAGTT+TGG | + | chr2_2:30754491-30754510 | None:intergenic | 30.0% | |
| CAAGATCTTATGGACATATT+GGG | + | chr2_2:30754504-30754523 | None:intergenic | 30.0% | |
| TCAAGATCTTATGGACATAT+TGG | + | chr2_2:30754505-30754524 | None:intergenic | 30.0% | |
| AAAGCAGTTTCAAGATCTTA+TGG | + | chr2_2:30754514-30754533 | None:intergenic | 30.0% | |
| TCTTAAGGACACAGTAAATT+GGG | + | chr2_2:30755116-30755135 | None:intergenic | 30.0% | |
| TTCTTAAGGACACAGTAAAT+TGG | + | chr2_2:30755117-30755136 | None:intergenic | 30.0% | |
| AATCAAGAACATGTTTGCTT+TGG | - | chr2_2:30755137-30755156 | Msa0247890:intron | 30.0% | |
| ATCAAGAACATGTTTGCTTT+GGG | - | chr2_2:30755138-30755157 | Msa0247890:intron | 30.0% | |
| ! | AACAATTGACTTTGACACAA+AGG | + | chr2_2:30755226-30755245 | None:intergenic | 30.0% |
| TTTGTGTCAAAGTCAATTGT+TGG | - | chr2_2:30755225-30755244 | Msa0247890:intron | 30.0% | |
| ATTTCTTCATGGAGATTTAG+AGG | + | chr2_2:30755418-30755437 | None:intergenic | 30.0% | |
| AATTACAAGCAAGAAAGAGT+AGG | - | chr2_2:30755488-30755507 | Msa0247890:intron | 30.0% | |
| AAAAGAAACATTTACACCAG+TGG | + | chr2_2:30755536-30755555 | None:intergenic | 30.0% | |
| AAAGAAATCATTATGCTAGG+CGG | - | chr2_2:30755601-30755620 | Msa0247890:intron | 30.0% | |
| !!! | CTTTATTTTTGGTTGAATGG+AGG | - | chr2_2:30755709-30755728 | Msa0247890:intron | 30.0% |
| ATTTAATAGTGCTTCCAGTT+GGG | + | chr2_2:30755780-30755799 | None:intergenic | 30.0% | |
| AATTTAATAGTGCTTCCAGT+TGG | + | chr2_2:30755781-30755800 | None:intergenic | 30.0% | |
| ! | TAGCTAAATAATGAAGTGTC+TGG | - | chr2_2:30755859-30755878 | Msa0247890:intron | 30.0% |
| !! | TAATGCTTTGTTTGCTTCTT+TGG | + | chr2_2:30756267-30756286 | None:intergenic | 30.0% |
| TTGTATTGAAGTGTAAACCA+TGG | + | chr2_2:30756363-30756382 | None:intergenic | 30.0% | |
| ! | TAATGTGTTAGATGCTTTTC+TGG | - | chr2_2:30756441-30756460 | Msa0247890:intron | 30.0% |
| !!! | GCTTTTAGAATTTGTTTGAG+AGG | - | chr2_2:30756714-30756733 | Msa0247890:intron | 30.0% |
| ! | TTTAGAATTTGTTTGAGAGG+GGG | - | chr2_2:30756717-30756736 | Msa0247890:intron | 30.0% |
| AGACTAATAATTCTCGATTG+TGG | + | chr2_2:30756784-30756803 | None:intergenic | 30.0% | |
| TGAAGGAACAACAATAAACT+AGG | - | chr2_2:30756968-30756987 | Msa0247890:intron | 30.0% | |
| ACTATACTAAAGAGGATAGT+GGG | - | chr2_2:30757141-30757160 | Msa0247890:intron | 30.0% | |
| GAAACTTGTCACAACAATTA+GGG | - | chr2_2:30757381-30757400 | Msa0247890:CDS | 30.0% | |
| ATTACACTTGTCAATTAGCT+TGG | - | chr2_2:30757563-30757582 | Msa0247890:intron | 30.0% | |
| TCTATTTAAGTACTACCATG+AGG | + | chr2_2:30757630-30757649 | None:intergenic | 30.0% | |
| ATATAATCTAATGCTATGGC+TGG | + | chr2_2:30757655-30757674 | None:intergenic | 30.0% | |
| GTCATTTATTTAGATGTACC+TGG | + | chr2_2:30757881-30757900 | None:intergenic | 30.0% | |
| TTATCAAATAGTTCATGGCA+TGG | - | chr2_2:30758093-30758112 | Msa0247890:intron | 30.0% | |
| ! | ATGTGTTTTCCTAAGAGTTT+AGG | - | chr2_2:30758129-30758148 | Msa0247890:intron | 30.0% |
| GCATTCTTCATGAATAAGAT+TGG | + | chr2_2:30758321-30758340 | None:intergenic | 30.0% | |
| !! | TAGACACATCTACTTGTTAT+TGG | - | chr2_2:30758345-30758364 | Msa0247890:intron | 30.0% |
| ! | TTCAAGTTCTTCAACATCTT+GGG | + | chr2_2:30758418-30758437 | None:intergenic | 30.0% |
| !! | TTTCAAGTTCTTCAACATCT+TGG | + | chr2_2:30758419-30758438 | None:intergenic | 30.0% |
| TGAAGAACTTGAAAAGAGAT+TGG | - | chr2_2:30758425-30758444 | Msa0247890:CDS | 30.0% | |
| AATTCTGCGTTTGTTTGTTT+AGG | - | chr2_2:30758636-30758655 | Msa0247890:five_prime_UTR | 30.0% | |
| TCCTAACTAAATGTTTCAAG+TGG | - | chr2_2:30758688-30758707 | Msa0247890:intron | 30.0% | |
| AGAGAATTTATTTGCAGCAA+AGG | - | chr2_2:30758830-30758849 | Msa0247890:intron | 30.0% | |
| GTTTGTAAGAGAAAAGACCT+TGG | + | chr2_2:30752634-30752653 | None:intergenic | 35.0% | |
| ! | TCTCTGCTTCAATTAGGTTT+TGG | - | chr2_2:30752817-30752836 | Msa0247890:three_prime_UTR | 35.0% |
| TAGGGCAAAACAAAACAAGA+GGG | + | chr2_2:30752899-30752918 | None:intergenic | 35.0% | |
| TTAGGGCAAAACAAAACAAG+AGG | + | chr2_2:30752900-30752919 | None:intergenic | 35.0% | |
| !! | AGGTTTGTTAATTCCTGAAG+AGG | - | chr2_2:30753179-30753198 | Msa0247890:CDS | 35.0% |
| ! | GTTAATTCCTGAAGAGGTTT+TGG | - | chr2_2:30753185-30753204 | Msa0247890:CDS | 35.0% |
| AAGGTAGAACAAAAGGAAGA+GGG | + | chr2_2:30753218-30753237 | None:intergenic | 35.0% | |
| AAAGGTAGAACAAAAGGAAG+AGG | + | chr2_2:30753219-30753238 | None:intergenic | 35.0% | |
| CCAAATTATTACCGTGTTGA+CGG | - | chr2_2:30753547-30753566 | Msa0247890:intron | 35.0% | |
| ATGTTGTTAATGTTTGGCGT+TGG | - | chr2_2:30753587-30753606 | Msa0247890:intron | 35.0% | |
| AATAGTTAAAGTTGAAGGGG+GGG | - | chr2_2:30753615-30753634 | Msa0247890:CDS | 35.0% | |
| ! | AGCTTTATGGCACTTACAAA+TGG | - | chr2_2:30753817-30753836 | Msa0247890:intron | 35.0% |
| TGATATCAAGTAAGCTCCAA+TGG | + | chr2_2:30753925-30753944 | None:intergenic | 35.0% | |
| TTATTCCTCAACTAGAGAAG+GGG | + | chr2_2:30754391-30754410 | None:intergenic | 35.0% | |
| CTTATTCCTCAACTAGAGAA+GGG | + | chr2_2:30754392-30754411 | None:intergenic | 35.0% | |
| ACTTATTCCTCAACTAGAGA+AGG | + | chr2_2:30754393-30754412 | None:intergenic | 35.0% | |
| TTGGGAATGATAGTTTGGAT+TGG | + | chr2_2:30754486-30754505 | None:intergenic | 35.0% | |
| !! | TTGGTAGCTTTGTTGGTTAA+AGG | + | chr2_2:30754549-30754568 | None:intergenic | 35.0% |
| !! | ACATCAATTGGTAGCTTTGT+TGG | + | chr2_2:30754556-30754575 | None:intergenic | 35.0% |
| TTACTAAATGTGTGTTCCCT+TGG | + | chr2_2:30754579-30754598 | None:intergenic | 35.0% | |
| ! | AGATTATGAGCATTGCCAAT+AGG | - | chr2_2:30754670-30754689 | Msa0247890:intron | 35.0% |
| TGTAAAAACATTGTTGCCTC+TGG | + | chr2_2:30754853-30754872 | None:intergenic | 35.0% | |
| ! | CAAGCACATATAAGAGTATG+AGG | - | chr2_2:30754873-30754892 | Msa0247890:intron | 35.0% |
| ATGCAGTATTAGTCATCGAT+TGG | + | chr2_2:30754906-30754925 | None:intergenic | 35.0% | |
| TAGCACATTAAGTCAAGAAC+GGG | + | chr2_2:30754970-30754989 | None:intergenic | 35.0% | |
| GTAGCACATTAAGTCAAGAA+CGG | + | chr2_2:30754971-30754990 | None:intergenic | 35.0% | |
| TCATGCATTCCAAATCAGTT+CGG | + | chr2_2:30755823-30755842 | None:intergenic | 35.0% | |
| ! | ATAATGAAGTGTCTGGTTAC+AGG | - | chr2_2:30755866-30755885 | Msa0247890:intron | 35.0% |
| CAATCAGTTTACAACCCAAA+GGG | - | chr2_2:30756208-30756227 | Msa0247890:intron | 35.0% | |
| TTTGTTTGCTTCTTTGGCAA+AGG | + | chr2_2:30756261-30756280 | None:intergenic | 35.0% | |
| ! | ATTTGCTGAGAAGATAAGCA+AGG | + | chr2_2:30756525-30756544 | None:intergenic | 35.0% |
| TTGCTTATCTTCTCAGCAAA+TGG | - | chr2_2:30756524-30756543 | Msa0247890:intron | 35.0% | |
| ! | TTAGAATTTGTTTGAGAGGG+GGG | - | chr2_2:30756718-30756737 | Msa0247890:intron | 35.0% |
| TTTCTCTGGTATTAGACTGT+TGG | - | chr2_2:30756829-30756848 | Msa0247890:intron | 35.0% | |
| TTCTCTGGTATTAGACTGTT+GGG | - | chr2_2:30756830-30756849 | Msa0247890:intron | 35.0% | |
| CGTGGTGCTTAAAAGAAATT+TGG | - | chr2_2:30756905-30756924 | Msa0247890:intron | 35.0% | |
| TTGTAGAACTGTCATCAAGA+TGG | - | chr2_2:30757071-30757090 | Msa0247890:intron | 35.0% | |
| CACTATCCTCTTTAGTATAG+TGG | + | chr2_2:30757142-30757161 | None:intergenic | 35.0% | |
| CACTATACTAAAGAGGATAG+TGG | - | chr2_2:30757140-30757159 | Msa0247890:intron | 35.0% | |
| ! | TCGTTTGGATACTTCACTTT+TGG | + | chr2_2:30757278-30757297 | None:intergenic | 35.0% |
| GGAAACTTGTCACAACAATT+AGG | - | chr2_2:30757380-30757399 | Msa0247890:CDS | 35.0% | |
| ! | TACTTTGTTGTACTCAACCA+CGG | - | chr2_2:30757503-30757522 | Msa0247890:intron | 35.0% |
| TGACAGGTTCTTGATGAAAT+TGG | - | chr2_2:30757971-30757990 | Msa0247890:intron | 35.0% | |
| AAGAATCAGTGCAATGACAA+AGG | + | chr2_2:30758176-30758195 | None:intergenic | 35.0% | |
| TGCTTTGTGAATATGCAGAT+CGG | - | chr2_2:30758389-30758408 | Msa0247890:intron | 35.0% | |
| ATATCTATCAACAGCTGTTG+TGG | + | chr2_2:30758475-30758494 | None:intergenic | 35.0% | |
| GCCACTTGAAACATTTAGTT+AGG | + | chr2_2:30758692-30758711 | None:intergenic | 35.0% | |
| TGGCAGTAAATAAGCCAATT+CGG | - | chr2_2:30758708-30758727 | Msa0247890:intron | 35.0% | |
| AGTAAATAAGCCAATTCGGT+CGG | - | chr2_2:30758712-30758731 | Msa0247890:intron | 35.0% | |
| AAGAAGAAAACCACACCCAA+AGG | - | chr2_2:30752864-30752883 | Msa0247890:three_prime_UTR | 40.0% | |
| GAAATGTCTGTAGCAACTAG+AGG | - | chr2_2:30753059-30753078 | Msa0247890:CDS | 40.0% | |
| !!! | TTCCTGAAGAGGTTTTGGTT+TGG | - | chr2_2:30753190-30753209 | Msa0247890:CDS | 40.0% |
| AGGTAGAACAAAAGGAAGAG+GGG | + | chr2_2:30753217-30753236 | None:intergenic | 40.0% | |
| TTAAACAAAGATAGCCCAGC+AGG | + | chr2_2:30753277-30753296 | None:intergenic | 40.0% | |
| CCGTCAACACGGTAATAATT+TGG | + | chr2_2:30753550-30753569 | None:intergenic | 40.0% | |
| CAGACATTTAACCGTCAACA+CGG | + | chr2_2:30753561-30753580 | None:intergenic | 40.0% | |
| TGATTTGAGCCAAGGGTTAA+TGG | - | chr2_2:30753660-30753679 | Msa0247890:CDS | 40.0% | |
| TTTACATTTACCTCCCTCCA+AGG | - | chr2_2:30753841-30753860 | Msa0247890:intron | 40.0% | |
| TTACATTTACCTCCCTCCAA+GGG | - | chr2_2:30753842-30753861 | Msa0247890:intron | 40.0% | |
| !!! | TGGACAAGTTTTGGATACAG+AGG | + | chr2_2:30753892-30753911 | None:intergenic | 40.0% |
| !! | TTGGTCTAGTGGACAAGTTT+TGG | + | chr2_2:30753901-30753920 | None:intergenic | 40.0% |
| TCAAGTAAGCTCCAATGGTT+TGG | + | chr2_2:30753920-30753939 | None:intergenic | 40.0% | |
| CTTCTGATGTTACAAGGCTT+TGG | - | chr2_2:30753990-30754009 | Msa0247890:intron | 40.0% | |
| CAAGGCAGTTAAGCACTAAA+AGG | + | chr2_2:30754168-30754187 | None:intergenic | 40.0% | |
| ! | TTCTTTTCCTGCAGTAGACA+AGG | + | chr2_2:30754186-30754205 | None:intergenic | 40.0% |
| TCTACTGCAGGAAAAGAAGT+TGG | - | chr2_2:30754188-30754207 | Msa0247890:intron | 40.0% | |
| AGAGGCAAAAACTGGAAATG+AGG | - | chr2_2:30754227-30754246 | Msa0247890:intron | 40.0% | |
| TTTGACAAAATCACGGTGTG+GGG | + | chr2_2:30754456-30754475 | None:intergenic | 40.0% | |
| GTTTGACAAAATCACGGTGT+GGG | + | chr2_2:30754457-30754476 | None:intergenic | 40.0% | |
| AGTTTGACAAAATCACGGTG+TGG | + | chr2_2:30754458-30754477 | None:intergenic | 40.0% | |
| CGGTGAGTTTGACAAAATCA+CGG | + | chr2_2:30754463-30754482 | None:intergenic | 40.0% | |
| ! | GGAATGATAGTTTGGATTGG+CGG | + | chr2_2:30754483-30754502 | None:intergenic | 40.0% |
| AAGCTACCAATTGATGTCCA+AGG | - | chr2_2:30754559-30754578 | Msa0247890:intron | 40.0% | |
| AGCTACCAATTGATGTCCAA+GGG | - | chr2_2:30754560-30754579 | Msa0247890:intron | 40.0% | |
| ! | TTATGAGCATTGCCAATAGG+CGG | - | chr2_2:30754673-30754692 | Msa0247890:intron | 40.0% |
| !!! | ATTGCCAATAGGCGGTTTTT+TGG | - | chr2_2:30754681-30754700 | Msa0247890:intron | 40.0% |
| TATGGCTTGAGGAAAATGTC+AGG | + | chr2_2:30754774-30754793 | None:intergenic | 40.0% | |
| GAATTTCAAGCTATGGCTTG+AGG | + | chr2_2:30754785-30754804 | None:intergenic | 40.0% | |
| TCAGTTTCTTACTACTCCAG+AGG | - | chr2_2:30754834-30754853 | Msa0247890:intron | 40.0% | |
| ! | CAGTATTAGTCATCGATTGG+AGG | + | chr2_2:30754903-30754922 | None:intergenic | 40.0% |
| !! | TAGAGGGAATTTTCTGGAAG+TGG | + | chr2_2:30754947-30754966 | None:intergenic | 40.0% |
| TTAAGTCAAGAACGGGTAGA+GGG | + | chr2_2:30754963-30754982 | None:intergenic | 40.0% | |
| ATTAAGTCAAGAACGGGTAG+AGG | + | chr2_2:30754964-30754983 | None:intergenic | 40.0% | |
| ! | ACACAGTAAATTGGGTTGCA+AGG | + | chr2_2:30755108-30755127 | None:intergenic | 40.0% |
| !! | GTTTGCTTTGGGAAATGAAG+AGG | - | chr2_2:30755149-30755168 | Msa0247890:intron | 40.0% |
| TATGTTGAGACGTCTGTTGA+AGG | + | chr2_2:30755256-30755275 | None:intergenic | 40.0% | |
| AACCATCTCTCATGCTTGAT+TGG | + | chr2_2:30755312-30755331 | None:intergenic | 40.0% | |
| GAATAAGAGGTCCTTAGTTG+AGG | + | chr2_2:30755372-30755391 | None:intergenic | 40.0% | |
| AGGGATTCTGCTTGAATAAG+AGG | + | chr2_2:30755385-30755404 | None:intergenic | 40.0% | |
| AAACATTTACACCAGTGGCA+AGG | + | chr2_2:30755531-30755550 | None:intergenic | 40.0% | |
| TGTGTGTATCCGAACTGATT+TGG | - | chr2_2:30755811-30755830 | Msa0247890:intron | 40.0% | |
| ACAGGCTTCTACTAAAATCC+TGG | - | chr2_2:30755884-30755903 | Msa0247890:intron | 40.0% | |
| CTTCTACTAAAATCCTGGCT+CGG | - | chr2_2:30755889-30755908 | Msa0247890:intron | 40.0% | |
| CAACAGATAACCAATCTGCA+GGG | - | chr2_2:30755930-30755949 | Msa0247890:intron | 40.0% | |
| CAAGCACTTCAATCTCTACA+GGG | - | chr2_2:30756084-30756103 | Msa0247890:intron | 40.0% | |
| TTCAATCTCTACAGGGATGA+AGG | - | chr2_2:30756091-30756110 | Msa0247890:intron | 40.0% | |
| TCAATCTCTACAGGGATGAA+GGG | - | chr2_2:30756092-30756111 | Msa0247890:intron | 40.0% | |
| AGCAATGGTGGCAATGAATA+AGG | - | chr2_2:30756124-30756143 | Msa0247890:intron | 40.0% | |
| GCAATCAGTTTACAACCCAA+AGG | - | chr2_2:30756207-30756226 | Msa0247890:intron | 40.0% | |
| ACTTTAGATTCAGTGCAAGC+AGG | + | chr2_2:30756418-30756437 | None:intergenic | 40.0% | |
| CGATTGTGGTGTGCAATTTA+TGG | + | chr2_2:30756770-30756789 | None:intergenic | 40.0% | |
| GTCTAATACCAGAGAAACAC+TGG | + | chr2_2:30756826-30756845 | None:intergenic | 40.0% | |
| ! | TTCTTTTAAGCACCACGCTT+TGG | + | chr2_2:30756902-30756921 | None:intergenic | 40.0% |
| GTAGATTGTGAGCAATAGAG+AGG | - | chr2_2:30757207-30757226 | Msa0247890:intron | 40.0% | |
| ! | TTGTGACAAGTTTCCCCTTT+TGG | + | chr2_2:30757375-30757394 | None:intergenic | 40.0% |
| TAGGTCACAGGTTCAATTTG+TGG | - | chr2_2:30757421-30757440 | Msa0247890:intron | 40.0% | |
| !! | CATTACCTTGCTTTTGCTAG+AGG | + | chr2_2:30757453-30757472 | None:intergenic | 40.0% |
| CTCTAGCAAAAGCAAGGTAA+TGG | - | chr2_2:30757451-30757470 | Msa0247890:intron | 40.0% | |
| GGTTGAGTACAACAAAGTAC+TGG | + | chr2_2:30757502-30757521 | None:intergenic | 40.0% | |
| CATCATCTCAATCTGCATCT+CGG | + | chr2_2:30757709-30757728 | None:intergenic | 40.0% | |
| TTTAGACAAAGATGAAGCCG+AGG | - | chr2_2:30757833-30757852 | Msa0247890:intron | 40.0% | |
| GGTTCTTGATGAAATTGGAG+TGG | - | chr2_2:30757976-30757995 | Msa0247890:intron | 40.0% | |
| ATTGGGCTCAAAACAAACCT+GGG | + | chr2_2:30758011-30758030 | None:intergenic | 40.0% | |
| TATTGGGCTCAAAACAAACC+TGG | + | chr2_2:30758012-30758031 | None:intergenic | 40.0% | |
| ! | AAATCACGTGTTTTCACCCA+AGG | - | chr2_2:30758063-30758082 | Msa0247890:intron | 40.0% |
| CCAACTACTCCTAAACTCTT+AGG | + | chr2_2:30758141-30758160 | None:intergenic | 40.0% | |
| CCTAAGAGTTTAGGAGTAGT+TGG | - | chr2_2:30758138-30758157 | Msa0247890:intron | 40.0% | |
| TAGTTATCTTCTGCTCCGAA+AGG | - | chr2_2:30758249-30758268 | Msa0247890:intron | 40.0% | |
| TGATCTCTTACACCTTATGC+AGG | + | chr2_2:30758790-30758809 | None:intergenic | 40.0% | |
| AGAGAAAAGACCTTGGGCTT+GGG | + | chr2_2:30752627-30752646 | None:intergenic | 45.0% | |
| AAGAGAAAAGACCTTGGGCT+TGG | + | chr2_2:30752628-30752647 | None:intergenic | 45.0% | |
| CTCTCTGCACACAGATTTAG+TGG | - | chr2_2:30752775-30752794 | Msa0247890:three_prime_UTR | 45.0% | |
| AGAGGGATGAACGAACCTTT+GGG | + | chr2_2:30752882-30752901 | None:intergenic | 45.0% | |
| AAGAGGGATGAACGAACCTT+TGG | + | chr2_2:30752883-30752902 | None:intergenic | 45.0% | |
| GACCAAACCAAAACCTCTTC+AGG | + | chr2_2:30753195-30753214 | None:intergenic | 45.0% | |
| CATCGACACTTCACACATTG+AGG | - | chr2_2:30753484-30753503 | Msa0247890:CDS | 45.0% | |
| TTAAAGTTGAAGGGGGGGTT+GGG | - | chr2_2:30753620-30753639 | Msa0247890:CDS | 45.0% | |
| ! | AGCTCATCTGATTTGAGCCA+AGG | - | chr2_2:30753652-30753671 | Msa0247890:CDS | 45.0% |
| ! | GCTCATCTGATTTGAGCCAA+GGG | - | chr2_2:30753653-30753672 | Msa0247890:CDS | 45.0% |
| TTAATGGAGTTGGAGGTCCT+GGG | - | chr2_2:30753676-30753695 | Msa0247890:intron | 45.0% | |
| !! | GTTTTGGATACAGAGGTTCC+AGG | + | chr2_2:30753885-30753904 | None:intergenic | 45.0% |
| TGTCCACTAGACCAAACCAT+TGG | - | chr2_2:30753906-30753925 | Msa0247890:intron | 45.0% | |
| ! | GGCTTTGGTAGAAGTTAGCA+AGG | - | chr2_2:30754005-30754024 | Msa0247890:intron | 45.0% |
| AGAGATAGCATCGCTTCAGA+TGG | - | chr2_2:30754086-30754105 | Msa0247890:intron | 45.0% | |
| TTAACTGCCTTGTCTACTGC+AGG | - | chr2_2:30754176-30754195 | Msa0247890:intron | 45.0% | |
| ACTGCAGGAAAAGAAGTTGG+TGG | - | chr2_2:30754191-30754210 | Msa0247890:intron | 45.0% | |
| GGTGGCAGAGATTAAAAGAG+AGG | - | chr2_2:30754209-30754228 | Msa0247890:intron | 45.0% | |
| GTGTTCCCTTGGACATCAAT+TGG | + | chr2_2:30754568-30754587 | None:intergenic | 45.0% | |
| !! | GGGAATTTTCTGGAAGTGGT+GGG | + | chr2_2:30754943-30754962 | None:intergenic | 45.0% |
| !! | AGGGAATTTTCTGGAAGTGG+TGG | + | chr2_2:30754944-30754963 | None:intergenic | 45.0% |
| ! | AACGGGTAGAGGGAATTTTC+TGG | + | chr2_2:30754953-30754972 | None:intergenic | 45.0% |
| ! | ATGAATGGCCAAGAGTACGA+CGG | + | chr2_2:30755023-30755042 | None:intergenic | 45.0% |
| GGAGTTGCTTATTCGCAACA+AGG | + | chr2_2:30755175-30755194 | None:intergenic | 45.0% | |
| CACCAATCAAGCATGAGAGA+TGG | - | chr2_2:30755307-30755326 | Msa0247890:intron | 45.0% | |
| AATCATTATGCTAGGCGGAG+AGG | - | chr2_2:30755606-30755625 | Msa0247890:intron | 45.0% | |
| ATCATTATGCTAGGCGGAGA+GGG | - | chr2_2:30755607-30755626 | Msa0247890:intron | 45.0% | |
| TACTGTAGTATCTGCCCAAC+TGG | - | chr2_2:30755763-30755782 | Msa0247890:intron | 45.0% | |
| ! | CCTGCAGATTGGTTATCTGT+TGG | + | chr2_2:30755932-30755951 | None:intergenic | 45.0% |
| CCAACAGATAACCAATCTGC+AGG | - | chr2_2:30755929-30755948 | Msa0247890:intron | 45.0% | |
| GCAAGCACTTCAATCTCTAC+AGG | - | chr2_2:30756083-30756102 | Msa0247890:intron | 45.0% | |
| CATTGCCACCATTGCTTTAG+TGG | + | chr2_2:30756120-30756139 | None:intergenic | 45.0% | |
| GTTTACAACCCAAAGGGTAG+AGG | - | chr2_2:30756214-30756233 | Msa0247890:intron | 45.0% | |
| ATCTTCTCAGCAAATGGCAC+CGG | - | chr2_2:30756530-30756549 | Msa0247890:intron | 45.0% | |
| ATCACTTTAGCCTGCTTTGC+CGG | + | chr2_2:30756552-30756571 | None:intergenic | 45.0% | |
| ATACCAGAGAAACACTGGAC+TGG | + | chr2_2:30756821-30756840 | None:intergenic | 45.0% | |
| !! | TTTAGTATAGTGGCACTGGC+AGG | + | chr2_2:30757132-30757151 | None:intergenic | 45.0% |
| CCTCTTTAGTATAGTGGCAC+TGG | + | chr2_2:30757136-30757155 | None:intergenic | 45.0% | |
| ! | CCAGTGCCACTATACTAAAG+AGG | - | chr2_2:30757133-30757152 | Msa0247890:intron | 45.0% |
| !! | ACTAAAGAGGATAGTGGGTG+TGG | - | chr2_2:30757146-30757165 | Msa0247890:intron | 45.0% |
| GAGCTCTTCTGATTCTTCCT+CGG | + | chr2_2:30757853-30757872 | None:intergenic | 45.0% | |
| ATCAGAAGAGCTCACTAACC+AGG | - | chr2_2:30757860-30757879 | Msa0247890:intron | 45.0% | |
| TATCTTCTGCTCCGAAAGGT+CGG | - | chr2_2:30758253-30758272 | Msa0247890:intron | 45.0% | |
| CTTGAAGCAATCCGACCTTT+CGG | + | chr2_2:30758267-30758286 | None:intergenic | 45.0% | |
| GTTGAATTCTATCCGTACCG+CGG | - | chr2_2:30758761-30758780 | Msa0247890:intron | 45.0% | |
| TTGAATTCTATCCGTACCGC+GGG | - | chr2_2:30758762-30758781 | Msa0247890:intron | 45.0% | |
| !!! | ACTTTTTTTTTTTTTTTAAA+TGG | + | chr2_2:30753292-30753311 | None:intergenic | 5.0% |
| AGAAAAGACCTTGGGCTTGG+GGG | + | chr2_2:30752625-30752644 | None:intergenic | 50.0% | |
| GAGAAAAGACCTTGGGCTTG+GGG | + | chr2_2:30752626-30752645 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGACAGA+GGG | + | chr2_2:30752754-30752773 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGACAG+AGG | + | chr2_2:30752755-30752774 | None:intergenic | 50.0% | |
| GATGAACGAACCTTTGGGTG+TGG | + | chr2_2:30752877-30752896 | None:intergenic | 50.0% | |
| TTGAGGTGTGTCCGACACAT+TGG | - | chr2_2:30753501-30753520 | Msa0247890:intron | 50.0% | |
| GTTAAAGTTGAAGGGGGGGT+TGG | - | chr2_2:30753619-30753638 | Msa0247890:CDS | 50.0% | |
| GAGCCAAGGGTTAATGGAGT+TGG | - | chr2_2:30753666-30753685 | Msa0247890:intron | 50.0% | |
| CCTCCAACTCCATTAACCCT+TGG | + | chr2_2:30753672-30753691 | None:intergenic | 50.0% | |
| CCAAGGGTTAATGGAGTTGG+AGG | - | chr2_2:30753669-30753688 | Msa0247890:intron | 50.0% | |
| GTTAATGGAGTTGGAGGTCC+TGG | - | chr2_2:30753675-30753694 | Msa0247890:intron | 50.0% | |
| TTTGTCCTGCGTTTGAACCC+AGG | + | chr2_2:30753696-30753715 | None:intergenic | 50.0% | |
| !! | GCTCCAATGGTTTGGTCTAG+TGG | + | chr2_2:30753912-30753931 | None:intergenic | 50.0% |
| GATAGCATCGCTTCAGATGG+AGG | - | chr2_2:30754089-30754108 | Msa0247890:intron | 50.0% | |
| AACCACCCCTTCTCTAGTTG+AGG | - | chr2_2:30754383-30754402 | Msa0247890:intron | 50.0% | |
| TTCCTCAACTAGAGAAGGGG+TGG | + | chr2_2:30754388-30754407 | None:intergenic | 50.0% | |
| CACGCCAAAAAACCGCCTAT+TGG | + | chr2_2:30754688-30754707 | None:intergenic | 50.0% | |
| ! | TGTAAGTGCCGTCGTACTCT+TGG | - | chr2_2:30755012-30755031 | Msa0247890:intron | 50.0% |
| TGCACACCAGTCCTCAACTA+AGG | - | chr2_2:30755358-30755377 | Msa0247890:CDS | 50.0% | |
| AGAGGTCCTTAGTTGAGGAC+TGG | + | chr2_2:30755367-30755386 | None:intergenic | 50.0% | |
| ACCAGTGGCAAGGATGAACA+CGG | + | chr2_2:30755521-30755540 | None:intergenic | 50.0% | |
| !! | GAAGGGTGCCACTAAAGCAA+TGG | - | chr2_2:30756109-30756128 | Msa0247890:intron | 50.0% |
| CGAGACAACCTCTACCCTTT+GGG | + | chr2_2:30756225-30756244 | None:intergenic | 50.0% | |
| TCGAGACAACCTCTACCCTT+TGG | + | chr2_2:30756226-30756245 | None:intergenic | 50.0% | |
| ACTCCAGTCCAGTGTTTCTC+TGG | - | chr2_2:30756815-30756834 | Msa0247890:intron | 50.0% | |
| TGTATGATCCAGCCAAAGCG+TGG | - | chr2_2:30756887-30756906 | Msa0247890:intron | 50.0% | |
| TTTAAGCACCACGCTTTGGC+TGG | + | chr2_2:30756898-30756917 | None:intergenic | 50.0% | |
| ! | GGGTGTGGTTTTTGTGCTTG+AGG | - | chr2_2:30757161-30757180 | Msa0247890:intron | 50.0% |
| GGTTGCACCATGTGACTAGT+AGG | - | chr2_2:30757402-30757421 | Msa0247890:intron | 50.0% | |
| CCTGTGACCTACTAGTCACA+TGG | + | chr2_2:30757412-30757431 | None:intergenic | 50.0% | |
| CCATGTGACTAGTAGGTCAC+AGG | - | chr2_2:30757409-30757428 | Msa0247890:intron | 50.0% | |
| ACCAGCCTCTAGCAAAAGCA+AGG | - | chr2_2:30757445-30757464 | Msa0247890:intron | 50.0% | |
| !! | ACCTTGCTTTTGCTAGAGGC+TGG | + | chr2_2:30757449-30757468 | None:intergenic | 50.0% |
| TCGCTGCGATAGATCTGCAA+TGG | - | chr2_2:30757474-30757493 | Msa0247890:intron | 50.0% | |
| TGTTGTACTCAACCACGGTG+AGG | - | chr2_2:30757508-30757527 | Msa0247890:intron | 50.0% | |
| CTACCATGAGGCTATCAGAC+AGG | + | chr2_2:30757618-30757637 | None:intergenic | 50.0% | |
| TGGAGTGGATATTGCATCCC+AGG | - | chr2_2:30757991-30758010 | Msa0247890:intron | 50.0% | |
| CGAAAGGTCGGATTGCTTCA+AGG | - | chr2_2:30758265-30758284 | Msa0247890:intron | 50.0% | |
| !! | GCATCTAGTACCGACCGAAT+TGG | + | chr2_2:30758725-30758744 | None:intergenic | 50.0% |
| ACCGTGTTCATCCTTGCCAC+TGG | - | chr2_2:30755517-30755536 | Msa0247890:CDS | 55.0% | |
| TGCACGACTTCCCTGCAGAT+TGG | + | chr2_2:30755943-30755962 | None:intergenic | 55.0% | |
| AGGGAAGTCGTGCACAGATC+AGG | - | chr2_2:30755949-30755968 | Msa0247890:intron | 55.0% | |
| GGGAAGTCGTGCACAGATCA+GGG | - | chr2_2:30755950-30755969 | Msa0247890:intron | 55.0% | |
| GGAAGTCGTGCACAGATCAG+GGG | - | chr2_2:30755951-30755970 | Msa0247890:intron | 55.0% | |
| GGGTGTAGCAACTCACACAC+AGG | - | chr2_2:30755971-30755990 | Msa0247890:intron | 55.0% | |
| !! | GGGTGCCACTAAAGCAATGG+TGG | - | chr2_2:30756112-30756131 | Msa0247890:intron | 55.0% |
| ATAAAGCTCTCGCCTCACCG+TGG | + | chr2_2:30757523-30757542 | None:intergenic | 55.0% | |
| GTGCCTGTCTGATAGCCTCA+TGG | - | chr2_2:30757612-30757631 | Msa0247890:intron | 55.0% | |
| ! | GGGGGAGCGTGCTGTGTATT+GGG | + | chr2_2:30752607-30752626 | None:intergenic | 60.0% |
| ! | TGGGGGAGCGTGCTGTGTAT+TGG | + | chr2_2:30752608-30752627 | None:intergenic | 60.0% |
| TGGTAGTCCAGGCTTCCTGC+TGG | - | chr2_2:30753259-30753278 | Msa0247890:intron | 60.0% | |
| GGTAGTCCAGGCTTCCTGCT+GGG | - | chr2_2:30753260-30753279 | Msa0247890:intron | 60.0% | |
| AGATAGCCCAGCAGGAAGCC+TGG | + | chr2_2:30753269-30753288 | None:intergenic | 60.0% | |
| TGAAGGGGGGGTTGGGTACT+TGG | - | chr2_2:30753627-30753646 | Msa0247890:CDS | 60.0% | |
| GAAGGGGGGGTTGGGTACTT+GGG | - | chr2_2:30753628-30753647 | Msa0247890:CDS | 60.0% | |
| GAGGTCCTGGGTTCAAACGC+AGG | - | chr2_2:30753688-30753707 | Msa0247890:intron | 60.0% | |
| !! | TCCTGGCTCGGCAGCTAGTT+AGG | - | chr2_2:30755901-30755920 | Msa0247890:intron | 60.0% |
| ACCTAACTAGCTGCCGAGCC+AGG | + | chr2_2:30755905-30755924 | None:intergenic | 60.0% | |
| !! | GCAAATGGCACCGGCAAAGC+AGG | - | chr2_2:30756539-30756558 | Msa0247890:intron | 60.0% |
| TTATGCAGGTGCCCGCGGTA+CGG | + | chr2_2:30758776-30758795 | None:intergenic | 60.0% | |
| ACACCTTATGCAGGTGCCCG+CGG | + | chr2_2:30758781-30758800 | None:intergenic | 60.0% | |
| GTACCGCGGGCACCTGCATA+AGG | - | chr2_2:30758775-30758794 | Msa0247890:intron | 65.0% | |
| AGCACGCTCCCCCAAGCCCA+AGG | - | chr2_2:30752614-30752633 | Msa0247890:three_prime_UTR | 70.0% | |
| !! | CCTCCCTCCAAGGGCACCAG+CGG | - | chr2_2:30753851-30753870 | Msa0247890:intron | 70.0% |
| !! | CTCCCTCCAAGGGCACCAGC+GGG | - | chr2_2:30753852-30753871 | Msa0247890:intron | 70.0% |
| !! | TCCCTCCAAGGGCACCAGCG+GGG | - | chr2_2:30753853-30753872 | Msa0247890:intron | 70.0% |
| GTTCCAGGTTCGAGCCCCGC+TGG | + | chr2_2:30753870-30753889 | None:intergenic | 70.0% | |
| CCGCTGGTGCCCTTGGAGGG+AGG | + | chr2_2:30753854-30753873 | None:intergenic | 75.0% | |
| GCCCCGCTGGTGCCCTTGGA+GGG | + | chr2_2:30753857-30753876 | None:intergenic | 75.0% | |
| AGCCCCGCTGGTGCCCTTGG+AGG | + | chr2_2:30753858-30753877 | None:intergenic | 75.0% | |
| TCGAGCCCCGCTGGTGCCCT+TGG | + | chr2_2:30753861-30753880 | None:intergenic | 75.0% | |
| GCACCAGCGGGGCTCGAACC+TGG | - | chr2_2:30753864-30753883 | Msa0247890:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 30752594 | 30758891 | 30752594 | ID=Msa0247890;Name=Msa0247890 |
| chr2_2 | mRNA | 30752594 | 30758891 | 30752594 | ID=Msa0247890-mRNA-1;Parent=Msa0247890;Name=Msa0247890-mRNA-1;_AED=0.21;_eAED=0.21;_QI=112|0.9|1|1|0.9|0.81|11|424|192 |
| chr2_2 | exon | 30752594 | 30753078 | 30752594 | ID=Msa0247890-mRNA-1:exon:10791;Parent=Msa0247890-mRNA-1 |
| chr2_2 | exon | 30753175 | 30753233 | 30753175 | ID=Msa0247890-mRNA-1:exon:10790;Parent=Msa0247890-mRNA-1 |
| chr2_2 | exon | 30753473 | 30753508 | 30753473 | ID=Msa0247890-mRNA-1:exon:10789;Parent=Msa0247890-mRNA-1 |
| chr2_2 | exon | 30753604 | 30753684 | 30753604 | ID=Msa0247890-mRNA-1:exon:10788;Parent=Msa0247890-mRNA-1 |
| chr2_2 | exon | 30755340 | 30755411 | 30755340 | ID=Msa0247890-mRNA-1:exon:10787;Parent=Msa0247890-mRNA-1 |
| chr2_2 | exon | 30755493 | 30755597 | 30755493 | ID=Msa0247890-mRNA-1:exon:10786;Parent=Msa0247890-mRNA-1 |
| chr2_2 | exon | 30757237 | 30757287 | 30757237 | ID=Msa0247890-mRNA-1:exon:10785;Parent=Msa0247890-mRNA-1 |
| chr2_2 | exon | 30757375 | 30757409 | 30757375 | ID=Msa0247890-mRNA-1:exon:10784;Parent=Msa0247890-mRNA-1 |
| chr2_2 | exon | 30758405 | 30758449 | 30758405 | ID=Msa0247890-mRNA-1:exon:10783;Parent=Msa0247890-mRNA-1 |
| chr2_2 | exon | 30758600 | 30758703 | 30758600 | ID=Msa0247890-mRNA-1:exon:10782;Parent=Msa0247890-mRNA-1 |
| chr2_2 | exon | 30758850 | 30758891 | 30758850 | ID=Msa0247890-mRNA-1:exon:10781;Parent=Msa0247890-mRNA-1 |
| chr2_2 | five_prime_UTR | 30758850 | 30758891 | 30758850 | ID=Msa0247890-mRNA-1:five_prime_utr;Parent=Msa0247890-mRNA-1 |
| chr2_2 | five_prime_UTR | 30758634 | 30758703 | 30758634 | ID=Msa0247890-mRNA-1:five_prime_utr;Parent=Msa0247890-mRNA-1 |
| chr2_2 | CDS | 30758600 | 30758633 | 30758600 | ID=Msa0247890-mRNA-1:cds;Parent=Msa0247890-mRNA-1 |
| chr2_2 | CDS | 30758405 | 30758449 | 30758405 | ID=Msa0247890-mRNA-1:cds;Parent=Msa0247890-mRNA-1 |
| chr2_2 | CDS | 30757375 | 30757409 | 30757375 | ID=Msa0247890-mRNA-1:cds;Parent=Msa0247890-mRNA-1 |
| chr2_2 | CDS | 30757237 | 30757287 | 30757237 | ID=Msa0247890-mRNA-1:cds;Parent=Msa0247890-mRNA-1 |
| chr2_2 | CDS | 30755493 | 30755597 | 30755493 | ID=Msa0247890-mRNA-1:cds;Parent=Msa0247890-mRNA-1 |
| chr2_2 | CDS | 30755340 | 30755411 | 30755340 | ID=Msa0247890-mRNA-1:cds;Parent=Msa0247890-mRNA-1 |
| chr2_2 | CDS | 30753604 | 30753684 | 30753604 | ID=Msa0247890-mRNA-1:cds;Parent=Msa0247890-mRNA-1 |
| chr2_2 | CDS | 30753473 | 30753508 | 30753473 | ID=Msa0247890-mRNA-1:cds;Parent=Msa0247890-mRNA-1 |
| chr2_2 | CDS | 30753175 | 30753233 | 30753175 | ID=Msa0247890-mRNA-1:cds;Parent=Msa0247890-mRNA-1 |
| chr2_2 | CDS | 30753018 | 30753078 | 30753018 | ID=Msa0247890-mRNA-1:cds;Parent=Msa0247890-mRNA-1 |
| chr2_2 | three_prime_UTR | 30752594 | 30753017 | 30752594 | ID=Msa0247890-mRNA-1:three_prime_utr;Parent=Msa0247890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
