Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0247940 | XP_013463763.1 | 88.426 | 216 | 1 | 1 | 1 | 192 | 1 | 216 | 1.15e-126 | 365 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0247940 | sp|Q0WTY4|VPS2B_ARATH | 74.324 | 222 | 27 | 2 | 1 | 192 | 1 | 222 | 2.31e-106 | 307 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0247940 | B7FHD8 | 88.426 | 216 | 1 | 1 | 1 | 192 | 1 | 216 | 5.50e-127 | 365 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0247940 | 0.806185 | 9.301872e-50 | -8.615850e-47 |
| Msa0001940 | Msa0247940 | 0.829794 | 4.216378e-55 | -8.615850e-47 |
| Msa0005890 | Msa0247940 | 0.826451 | 2.693027e-54 | -8.615850e-47 |
| Msa0017950 | Msa0247940 | 0.829925 | 3.917667e-55 | -8.615850e-47 |
| Msa0018000 | Msa0247940 | 0.814278 | 1.671063e-51 | -8.615850e-47 |
| Msa0024550 | Msa0247940 | 0.823833 | 1.119629e-53 | -8.615850e-47 |
| Msa0027230 | Msa0247940 | 0.801077 | 1.067424e-48 | -8.615850e-47 |
| Msa0027820 | Msa0247940 | 0.818364 | 2.037023e-52 | -8.615850e-47 |
| Msa0028420 | Msa0247940 | 0.807107 | 5.941028e-50 | -8.615850e-47 |
| Msa0030370 | Msa0247940 | 0.804257 | 2.355549e-49 | -8.615850e-47 |
| Msa0051020 | Msa0247940 | 0.802695 | 4.964737e-49 | -8.615850e-47 |
| Msa0054690 | Msa0247940 | 0.806676 | 7.327448e-50 | -8.615850e-47 |
| Msa0061340 | Msa0247940 | 0.809966 | 1.456768e-50 | -8.615850e-47 |
| Msa0075220 | Msa0247940 | 0.827187 | 1.796379e-54 | -8.615850e-47 |
| Msa0081520 | Msa0247940 | 0.849816 | 2.535456e-60 | -8.615850e-47 |
| Msa0092790 | Msa0247940 | 0.800327 | 1.518027e-48 | -8.615850e-47 |
| Msa0093850 | Msa0247940 | 0.812790 | 3.550173e-51 | -8.615850e-47 |
| Msa0094780 | Msa0247940 | 0.809378 | 1.949416e-50 | -8.615850e-47 |
| Msa0097770 | Msa0247940 | 0.818206 | 2.212615e-52 | -8.615850e-47 |
| Msa0098040 | Msa0247940 | 0.801753 | 7.760046e-49 | -8.615850e-47 |
| Msa0120400 | Msa0247940 | 0.824947 | 6.122198e-54 | -8.615850e-47 |
| Msa0121090 | Msa0247940 | 0.801783 | 7.651245e-49 | -8.615850e-47 |
| Msa0131900 | Msa0247940 | 0.804600 | 1.998365e-49 | -8.615850e-47 |
| Msa0133280 | Msa0247940 | 0.807958 | 3.918781e-50 | -8.615850e-47 |
| Msa0136650 | Msa0247940 | 0.846568 | 2.001143e-59 | -8.615850e-47 |
| Msa0144360 | Msa0247940 | 0.821974 | 3.034693e-53 | -8.615850e-47 |
| Msa0152400 | Msa0247940 | 0.807399 | 5.152006e-50 | -8.615850e-47 |
| Msa0164330 | Msa0247940 | 0.808319 | 3.283325e-50 | -8.615850e-47 |
| Msa0167520 | Msa0247940 | 0.819894 | 9.137014e-53 | -8.615850e-47 |
| Msa0168500 | Msa0247940 | 0.819931 | 8.962214e-53 | -8.615850e-47 |
| Msa0173890 | Msa0247940 | 0.833261 | 5.902544e-56 | -8.615850e-47 |
| Msa0174450 | Msa0247940 | 0.846828 | 1.699309e-59 | -8.615850e-47 |
| Msa0175930 | Msa0247940 | 0.812156 | 4.885378e-51 | -8.615850e-47 |
| Msa0221000 | Msa0247940 | 0.844339 | 8.036095e-59 | -8.615850e-47 |
| Msa0225100 | Msa0247940 | 0.817435 | 3.303166e-52 | -8.615850e-47 |
| Msa0225680 | Msa0247940 | 0.800917 | 1.150730e-48 | -8.615850e-47 |
| Msa0225860 | Msa0247940 | 0.833263 | 5.897887e-56 | -8.615850e-47 |
| Msa0237420 | Msa0247940 | 0.805184 | 1.509212e-49 | -8.615850e-47 |
| Msa0244640 | Msa0247940 | 0.807374 | 5.215443e-50 | -8.615850e-47 |
| Msa0247890 | Msa0247940 | 0.905447 | 4.251978e-80 | -8.615850e-47 |
| Msa0247940 | Msa0255090 | 0.807835 | 4.162772e-50 | -8.615850e-47 |
| Msa0247940 | Msa0258310 | 0.801903 | 7.229378e-49 | -8.615850e-47 |
| Msa0247940 | Msa0259380 | 0.802702 | 4.948779e-49 | -8.615850e-47 |
| Msa0247940 | Msa0261340 | 0.803452 | 3.462528e-49 | -8.615850e-47 |
| Msa0247940 | Msa0263080 | 0.814061 | 1.865875e-51 | -8.615850e-47 |
| Msa0247940 | Msa0265850 | 0.808895 | 2.473034e-50 | -8.615850e-47 |
| Msa0247940 | Msa0266180 | 0.813873 | 2.053563e-51 | -8.615850e-47 |
| Msa0247940 | Msa0267110 | 0.814061 | 1.866711e-51 | -8.615850e-47 |
| Msa0247940 | Msa0287740 | 0.817146 | 3.837130e-52 | -8.615850e-47 |
| Msa0247940 | Msa0292400 | 0.831693 | 1.444474e-55 | -8.615850e-47 |
| Msa0247940 | Msa0298470 | 0.817893 | 2.604259e-52 | -8.615850e-47 |
| Msa0247940 | Msa0300270 | 0.851769 | 7.153424e-61 | -8.615850e-47 |
| Msa0247940 | Msa0300320 | 0.861211 | 1.202933e-63 | -8.615850e-47 |
| Msa0247940 | Msa0300690 | 0.835647 | 1.485721e-56 | -8.615850e-47 |
| Msa0247940 | Msa0307270 | 0.812122 | 4.969994e-51 | -8.615850e-47 |
| Msa0247940 | Msa0321620 | 0.826422 | 2.736249e-54 | -8.615850e-47 |
| Msa0247940 | Msa0330380 | 0.808347 | 3.238185e-50 | -8.615850e-47 |
| Msa0247940 | Msa0335800 | 0.801758 | 7.740025e-49 | -8.615850e-47 |
| Msa0247940 | Msa0337700 | 0.850951 | 1.217745e-60 | -8.615850e-47 |
| Msa0247940 | Msa0338210 | 0.822450 | 2.353063e-53 | -8.615850e-47 |
| Msa0247940 | Msa0339500 | 0.849765 | 2.621487e-60 | -8.615850e-47 |
| Msa0247940 | Msa0340500 | 0.827245 | 1.740292e-54 | -8.615850e-47 |
| Msa0247940 | Msa0341690 | 0.821375 | 4.174477e-53 | -8.615850e-47 |
| Msa0247940 | Msa0345330 | 0.804921 | 1.712509e-49 | -8.615850e-47 |
| Msa0247940 | Msa0345410 | 0.801113 | 1.049571e-48 | -8.615850e-47 |
| Msa0247940 | Msa0360210 | 0.804022 | 2.636468e-49 | -8.615850e-47 |
| Msa0247940 | Msa0378720 | 0.853873 | 1.792180e-61 | -8.615850e-47 |
| Msa0247940 | Msa0380620 | 0.833301 | 5.770604e-56 | -8.615850e-47 |
| Msa0247940 | Msa0392510 | 0.819260 | 1.274907e-52 | -8.615850e-47 |
| Msa0247940 | Msa0406770 | 0.806490 | 8.021437e-50 | -8.615850e-47 |
| Msa0247940 | Msa0417880 | 0.809293 | 2.032465e-50 | -8.615850e-47 |
| Msa0247940 | Msa0422850 | 0.817064 | 4.001619e-52 | -8.615850e-47 |
| Msa0247940 | Msa0422930 | 0.818583 | 1.816809e-52 | -8.615850e-47 |
| Msa0247940 | Msa0428370 | 0.822881 | 1.868494e-53 | -8.615850e-47 |
| Msa0247940 | Msa0428920 | 0.807432 | 5.069937e-50 | -8.615850e-47 |
| Msa0247940 | Msa0430260 | 0.852926 | 3.349082e-61 | -8.615850e-47 |
| Msa0247940 | Msa0464680 | 0.804165 | 2.461766e-49 | -8.615850e-47 |
| Msa0247940 | Msa0467430 | 0.804026 | 2.632094e-49 | -8.615850e-47 |
| Msa0247940 | Msa0474730 | 0.849034 | 4.188561e-60 | -8.615850e-47 |
| Msa0247940 | Msa0475790 | 0.801052 | 1.079848e-48 | -8.615850e-47 |
| Msa0247940 | Msa0479170 | 0.823898 | 1.080797e-53 | -8.615850e-47 |
| Msa0247940 | Msa0479200 | 0.827877 | 1.227276e-54 | -8.615850e-47 |
| Msa0247940 | Msa0483100 | 0.821000 | 5.095027e-53 | -8.615850e-47 |
| Msa0247940 | Msa0484380 | 0.828432 | 9.019353e-55 | -8.615850e-47 |
| Msa0247940 | Msa0500380 | 0.842022 | 3.331957e-58 | -8.615850e-47 |
| Msa0247940 | Msa0518030 | 0.810510 | 1.111841e-50 | -8.615850e-47 |
| Msa0247940 | Msa0527190 | 0.805498 | 1.296650e-49 | -8.615850e-47 |
| Msa0247940 | Msa0527860 | 0.809918 | 1.491943e-50 | -8.615850e-47 |
| Msa0247940 | Msa0529030 | 0.805567 | 1.254543e-49 | -8.615850e-47 |
| Msa0247940 | Msa0534720 | 0.804730 | 1.877790e-49 | -8.615850e-47 |
| Msa0247940 | Msa0548470 | 0.809205 | 2.123369e-50 | -8.615850e-47 |
| Msa0247940 | Msa0549360 | 0.811606 | 6.436088e-51 | -8.615850e-47 |
| Msa0247940 | Msa0556010 | 0.841147 | 5.668983e-58 | -8.615850e-47 |
| Msa0247940 | Msa0569200 | 0.802475 | 5.512777e-49 | -8.615850e-47 |
| Msa0247940 | Msa0571290 | 0.801119 | 1.046525e-48 | -8.615850e-47 |
| Msa0247940 | Msa0574390 | 0.819026 | 1.441633e-52 | -8.615850e-47 |
| Msa0247940 | Msa0574890 | 0.813486 | 2.497759e-51 | -8.615850e-47 |
| Msa0247940 | Msa0580370 | 0.850541 | 1.588665e-60 | -8.615850e-47 |
| Msa0247940 | Msa0581470 | 0.840601 | 7.879697e-58 | -8.615850e-47 |
| Msa0247940 | Msa0582480 | 0.810535 | 1.098579e-50 | -8.615850e-47 |
| Msa0247940 | Msa0597790 | 0.857347 | 1.736199e-62 | -8.615850e-47 |
| Msa0247940 | Msa0600930 | 0.813993 | 1.931958e-51 | -8.615850e-47 |
| Msa0247940 | Msa0611210 | 0.807145 | 5.831056e-50 | -8.615850e-47 |
| Msa0247940 | Msa0614000 | 0.802926 | 4.449848e-49 | -8.615850e-47 |
| Msa0247940 | Msa0624900 | 0.825826 | 3.792819e-54 | -8.615850e-47 |
| Msa0247940 | Msa0626450 | 0.837964 | 3.808786e-57 | -8.615850e-47 |
| Msa0247940 | Msa0626490 | 0.838645 | 2.542806e-57 | -8.615850e-47 |
| Msa0247940 | Msa0626510 | 0.817429 | 3.312600e-52 | -8.615850e-47 |
| Msa0247940 | Msa0637560 | 0.809947 | 1.470734e-50 | -8.615850e-47 |
| Msa0247940 | Msa0637580 | 0.811275 | 7.593676e-51 | -8.615850e-47 |
| Msa0247940 | Msa0638480 | 0.834512 | 2.872028e-56 | -8.615850e-47 |
| Msa0247940 | Msa0643300 | 0.806492 | 8.013961e-50 | -8.615850e-47 |
| Msa0247940 | Msa0651550 | 0.800884 | 1.168951e-48 | -8.615850e-47 |
| Msa0247940 | Msa0658640 | 0.816746 | 4.717046e-52 | -8.615850e-47 |
| Msa0247940 | Msa0660370 | 0.806953 | 6.402254e-50 | -8.615850e-47 |
| Msa0247940 | Msa0664600 | 0.843279 | 1.545177e-58 | -8.615850e-47 |
| Msa0247940 | Msa0683570 | 0.812607 | 3.893120e-51 | -8.615850e-47 |
| Msa0247940 | Msa0695270 | 0.812255 | 4.647062e-51 | -8.615850e-47 |
| Msa0247940 | Msa0697160 | 0.828738 | 7.608812e-55 | -8.615850e-47 |
| Msa0247940 | Msa0711430 | 0.801987 | 6.946131e-49 | -8.615850e-47 |
| Msa0247940 | Msa0715060 | 0.802085 | 6.630544e-49 | -8.615850e-47 |
| Msa0247940 | Msa0721080 | 0.806812 | 6.858159e-50 | -8.615850e-47 |
| Msa0247940 | Msa0725000 | 0.808781 | 2.616825e-50 | -8.615850e-47 |
| Msa0247940 | Msa0733390 | 0.812500 | 4.108720e-51 | -8.615850e-47 |
| Msa0247940 | Msa0735780 | 0.818882 | 1.554117e-52 | -8.615850e-47 |
| Msa0247940 | Msa0738040 | 0.808568 | 2.904864e-50 | -8.615850e-47 |
| Msa0247940 | Msa0741220 | 0.801816 | 7.530759e-49 | -8.615850e-47 |
| Msa0247940 | Msa0760560 | 0.811809 | 5.814625e-51 | -8.615850e-47 |
| Msa0247940 | Msa0762910 | 0.810007 | 1.427697e-50 | -8.615850e-47 |
| Msa0247940 | Msa0768990 | 0.822145 | 2.770108e-53 | -8.615850e-47 |
| Msa0247940 | Msa0769180 | 0.802278 | 6.053470e-49 | -8.615850e-47 |
| Msa0247940 | Msa0778590 | 0.803492 | 3.397396e-49 | -8.615850e-47 |
| Msa0247940 | Msa0789100 | 0.824528 | 7.687670e-54 | -8.615850e-47 |
| Msa0247940 | Msa0795870 | 0.846842 | 1.684165e-59 | -8.615850e-47 |
| Msa0247940 | Msa0805330 | 0.831187 | 1.924603e-55 | -8.615850e-47 |
| Msa0247940 | Msa0807820 | 0.803726 | 3.038448e-49 | -8.615850e-47 |
| Msa0247940 | Msa0824450 | 0.801269 | 9.752073e-49 | -8.615850e-47 |
| Msa0247940 | Msa0826130 | 0.801489 | 8.788528e-49 | -8.615850e-47 |
| Msa0247940 | Msa0832120 | 0.817446 | 3.283604e-52 | -8.615850e-47 |
| Msa0247940 | Msa0833530 | 0.812357 | 4.415638e-51 | -8.615850e-47 |
| Msa0247940 | Msa0833650 | 0.849857 | 2.469500e-60 | -8.615850e-47 |
| Msa0247940 | Msa0845110 | 0.806347 | 8.596003e-50 | -8.615850e-47 |
| Msa0247940 | Msa0861510 | 0.850777 | 1.363221e-60 | -8.615850e-47 |
| Msa0247940 | Msa0861530 | 0.821443 | 4.027770e-53 | -8.615850e-47 |
| Msa0247940 | Msa0861600 | 0.851526 | 8.381105e-61 | -8.615850e-47 |
| Msa0247940 | Msa0869780 | 0.825066 | 5.738486e-54 | -8.615850e-47 |
| Msa0247940 | Msa0875290 | 0.806777 | 6.976222e-50 | -8.615850e-47 |
| Msa0247940 | Msa0902510 | 0.810447 | 1.147760e-50 | -8.615850e-47 |
| Msa0247940 | Msa0945110 | 0.812995 | 3.201322e-51 | -8.615850e-47 |
| Msa0247940 | Msa0945490 | 0.806247 | 9.023407e-50 | -8.615850e-47 |
| Msa0247940 | Msa0967380 | 0.842008 | 3.361833e-58 | -8.615850e-47 |
| Msa0247940 | Msa0967870 | 0.818175 | 2.248135e-52 | -8.615850e-47 |
| Msa0247940 | Msa0979180 | 0.800264 | 1.563584e-48 | -8.615850e-47 |
| Msa0247940 | Msa1004800 | 0.819886 | 9.177436e-53 | -8.615850e-47 |
| Msa0247940 | Msa1005870 | 0.808027 | 3.789177e-50 | -8.615850e-47 |
| Msa0247940 | Msa1011530 | 0.810149 | 1.330595e-50 | -8.615850e-47 |
| Msa0247940 | Msa1019430 | 0.806446 | 8.195398e-50 | -8.615850e-47 |
| Msa0247940 | Msa1019470 | 0.807351 | 5.273052e-50 | -8.615850e-47 |
| Msa0247940 | Msa1020480 | 0.817400 | 3.363875e-52 | -8.615850e-47 |
| Msa0247940 | Msa1020510 | 0.841239 | 5.361290e-58 | -8.615850e-47 |
| Msa0247940 | Msa1020670 | 0.800948 | 1.134305e-48 | -8.615850e-47 |
| Msa0247940 | Msa1043370 | 0.805415 | 1.349588e-49 | -8.615850e-47 |
| Msa0247940 | Msa1045140 | 0.810743 | 9.901816e-51 | -8.615850e-47 |
| Msa0247940 | Msa1050910 | 0.802399 | 5.713515e-49 | -8.615850e-47 |
| Msa0247940 | Msa1051900 | 0.824512 | 7.753369e-54 | -8.615850e-47 |
| Msa0247940 | Msa1078170 | 0.818563 | 1.836492e-52 | -8.615850e-47 |
| Msa0247940 | Msa1079230 | 0.824492 | 7.837154e-54 | -8.615850e-47 |
| Msa0247940 | Msa1085330 | 0.824025 | 1.009277e-53 | -8.615850e-47 |
| Msa0247940 | Msa1092010 | 0.807631 | 4.598711e-50 | -8.615850e-47 |
| Msa0247940 | Msa1103990 | 0.823572 | 1.288711e-53 | -8.615850e-47 |
| Msa0247940 | Msa1113340 | 0.828655 | 7.970099e-55 | -8.615850e-47 |
| Msa0247940 | Msa1123380 | 0.807942 | 3.949426e-50 | -8.615850e-47 |
| Msa0247940 | Msa1124110 | 0.837468 | 5.107626e-57 | -8.615850e-47 |
| Msa0247940 | Msa1132840 | 0.855206 | 7.369487e-62 | -8.615850e-47 |
| Msa0247940 | Msa1140210 | 0.816396 | 5.652274e-52 | -8.615850e-47 |
| Msa0247940 | Msa1145810 | 0.803429 | 3.500707e-49 | -8.615850e-47 |
| Msa0247940 | Msa1157870 | 0.843656 | 1.225363e-58 | -8.615850e-47 |
| Msa0247940 | Msa1160920 | 0.829603 | 4.693553e-55 | -8.615850e-47 |
| Msa0247940 | Msa1162770 | 0.805803 | 1.119289e-49 | -8.615850e-47 |
| Msa0247940 | Msa1168950 | 0.833796 | 4.340918e-56 | -8.615850e-47 |
| Msa0247940 | Msa1169040 | 0.827075 | 1.911587e-54 | -8.615850e-47 |
| Msa0247940 | Msa1186020 | 0.836817 | 7.491692e-57 | -8.615850e-47 |
| Msa0247940 | Msa1189070 | 0.803202 | 3.900692e-49 | -8.615850e-47 |
| Msa0247940 | Msa1192090 | 0.807637 | 4.586901e-50 | -8.615850e-47 |
| Msa0247940 | Msa1193170 | 0.800832 | 1.197545e-48 | -8.615850e-47 |
| Msa0247940 | Msa1199570 | 0.807099 | 5.963477e-50 | -8.615850e-47 |
| Msa0247940 | Msa1200890 | 0.837588 | 4.756359e-57 | -8.615850e-47 |
| Msa0247940 | Msa1203710 | 0.820601 | 6.293185e-53 | -8.615850e-47 |
| Msa0247940 | Msa1205280 | 0.815918 | 7.227186e-52 | -8.615850e-47 |
| Msa0247940 | Msa1208160 | 0.816188 | 6.290192e-52 | -8.615850e-47 |
| Msa0247940 | Msa1208430 | 0.809530 | 1.807893e-50 | -8.615850e-47 |
| Msa0247940 | Msa1208950 | 0.802981 | 4.334414e-49 | -8.615850e-47 |
| Msa0247940 | Msa1209450 | 0.815385 | 9.500711e-52 | -8.615850e-47 |
| Msa0247940 | Msa1209460 | 0.801596 | 8.355571e-49 | -8.615850e-47 |
| Msa0247940 | Msa1226520 | 0.818327 | 2.076816e-52 | -8.615850e-47 |
| Msa0247940 | Msa1228200 | 0.824698 | 7.010919e-54 | -8.615850e-47 |
| Msa0247940 | Msa1229500 | 0.800173 | 1.631988e-48 | -8.615850e-47 |
| Msa0247940 | Msa1232740 | 0.839171 | 1.858981e-57 | -8.615850e-47 |
| Msa0247940 | Msa1236410 | 0.812624 | 3.860042e-51 | -8.615850e-47 |
| Msa0247940 | Msa1242670 | 0.808534 | 2.953928e-50 | -8.615850e-47 |
| Msa0247940 | Msa1253550 | 0.840118 | 1.054194e-57 | -8.615850e-47 |
| Msa0247940 | Msa1267770 | 0.810130 | 1.343119e-50 | -8.615850e-47 |
| Msa0247940 | Msa1276660 | 0.824153 | 9.418531e-54 | -8.615850e-47 |
| Msa0247940 | Msa1277150 | 0.805944 | 1.045356e-49 | -8.615850e-47 |
| Msa0247940 | Msa1297230 | 0.824353 | 8.450861e-54 | -8.615850e-47 |
| Msa0247940 | Msa1307630 | 0.809588 | 1.756977e-50 | -8.615850e-47 |
| Msa0247940 | Msa1313320 | 0.832296 | 1.025099e-55 | -8.615850e-47 |
| Msa0247940 | Msa1320670 | 0.827071 | 1.915775e-54 | -8.615850e-47 |
| Msa0247940 | Msa1328710 | 0.801833 | 7.470223e-49 | -8.615850e-47 |
| Msa0247940 | Msa1330420 | 0.853955 | 1.696403e-61 | -8.615850e-47 |
| Msa0247940 | Msa1337880 | 0.810235 | 1.274850e-50 | -8.615850e-47 |
| Msa0247940 | Msa1343430 | 0.815345 | 9.695426e-52 | -8.615850e-47 |
| Msa0247940 | Msa1348090 | 0.850424 | 1.713495e-60 | -8.615850e-47 |
| Msa0247940 | Msa1355450 | 0.817801 | 2.731438e-52 | -8.615850e-47 |
| Msa0247940 | Msa1356830 | 0.833920 | 4.042725e-56 | -8.615850e-47 |
| Msa0247940 | Msa1359690 | 0.804403 | 2.196497e-49 | -8.615850e-47 |
| Msa0247940 | Msa1369150 | 0.820057 | 8.387542e-53 | -8.615850e-47 |
| Msa0247940 | Msa1371520 | 0.804581 | 2.017115e-49 | -8.615850e-47 |
| Msa0247940 | Msa1373100 | 0.816487 | 5.393123e-52 | -8.615850e-47 |
| Msa0247940 | Msa1375280 | 0.803095 | 4.106139e-49 | -8.615850e-47 |
| Msa0247940 | Msa1392580 | 0.812824 | 3.490273e-51 | -8.615850e-47 |
| Msa0247940 | Msa1397400 | 0.802577 | 5.251095e-49 | -8.615850e-47 |
| Msa0247940 | Msa1405460 | 0.805104 | 1.567949e-49 | -8.615850e-47 |
| Msa0247940 | Msa1418240 | 0.804386 | 2.214765e-49 | -8.615850e-47 |
| Msa0247940 | Msa1422950 | 0.816071 | 6.680925e-52 | -8.615850e-47 |
| Msa0247940 | Msa1425880 | 0.815012 | 1.149864e-51 | -8.615850e-47 |
| Msa0247940 | Msa1437940 | 0.823775 | 1.154945e-53 | -8.615850e-47 |
| Msa0247940 | Msa1438280 | 0.806376 | 8.478296e-50 | -8.615850e-47 |
| Msa0247940 | Msa1440310 | 0.818126 | 2.306696e-52 | -8.615850e-47 |
| Msa0247940 | Msa1440880 | 0.832040 | 1.185937e-55 | -8.615850e-47 |
| Msa0247940 | Msa1440960 | 0.830512 | 2.816753e-55 | -8.615850e-47 |
| Msa0247940 | Msa1446810 | 0.845416 | 4.118198e-59 | -8.615850e-47 |
| Msa0247940 | Msa1451160 | 0.819745 | 9.881957e-53 | -8.615850e-47 |
| Msa0247940 | Msa1464810 | 0.807220 | 5.621219e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0247940 | MtrunA17_Chr2g0303251 | 88.426 | 216 | 1 | 1 | 1 | 192 | 1 | 216 | 1.06e-130 | 365 |
| Msa0247940 | MtrunA17_Chr1g0183621 | 64.019 | 214 | 49 | 2 | 1 | 190 | 5 | 214 | 1.67e-92 | 269 |
| Msa0247940 | MtrunA17_Chr7g0261511 | 67.290 | 214 | 42 | 2 | 1 | 190 | 1 | 210 | 2.63e-82 | 243 |
| Msa0247940 | MtrunA17_Chr2g0300321 | 37.727 | 220 | 107 | 2 | 3 | 192 | 4 | 223 | 8.36e-31 | 112 |
| Msa0247940 | MtrunA17_Chr8g0343561 | 36.158 | 177 | 87 | 2 | 3 | 154 | 4 | 179 | 4.93e-28 | 104 |
| Msa0247940 | MtrunA17_Chr4g0028231 | 27.928 | 222 | 128 | 3 | 1 | 190 | 5 | 226 | 1.18e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0247940 | AT5G44560.1 | 74.324 | 222 | 27 | 2 | 1 | 192 | 1 | 222 | 2.34e-107 | 307 |
| Msa0247940 | AT5G44560.2 | 72.772 | 202 | 25 | 2 | 21 | 192 | 1 | 202 | 5.66e-93 | 270 |
| Msa0247940 | AT5G44560.4 | 76.966 | 178 | 17 | 1 | 1 | 154 | 1 | 178 | 6.68e-92 | 266 |
| Msa0247940 | AT1G03950.1 | 63.084 | 214 | 51 | 2 | 1 | 190 | 1 | 210 | 3.19e-90 | 263 |
| Msa0247940 | AT5G44560.3 | 90.351 | 114 | 11 | 0 | 1 | 114 | 1 | 114 | 2.34e-70 | 211 |
| Msa0247940 | AT2G06530.1 | 37.946 | 224 | 107 | 4 | 1 | 192 | 2 | 225 | 1.54e-33 | 119 |
| Msa0247940 | AT2G06530.2 | 36.500 | 200 | 96 | 3 | 24 | 192 | 5 | 204 | 2.56e-26 | 100 |
| Msa0247940 | AT5G22950.1 | 27.679 | 224 | 128 | 4 | 1 | 190 | 5 | 228 | 6.04e-11 | 60.1 |
Find 67 sgRNAs with CRISPR-Local
Find 373 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACAGGTTCTTGATGAAAT+TGG | 0.228952 | 2_2:+30876782 | Msa0247940:intron |
| CACTGTCCAAATTGTGAAAA+TGG | 0.244222 | 2_2:+30877681 | Msa0247940:three_prime_UTR |
| CATTGCCACCATTGCTTTAG+TGG | 0.261194 | 2_2:-30874928 | None:intergenic |
| TCTCTGCTTCAATTAGGTTT+TGG | 0.272018 | 2_2:+30871636 | Msa0247940:five_prime_UTR |
| TAACATTCTCTGCTTCAATT+AGG | 0.278991 | 2_2:+30871630 | Msa0247940:five_prime_UTR |
| AATTCTGCGTTTGTTTGTTT+AGG | 0.295849 | 2_2:+30877447 | Msa0247940:three_prime_UTR |
| TTTCAAGTTCTTCAACATCT+TGG | 0.321093 | 2_2:-30877227 | None:intergenic |
| AGCAATGGTGGCAATGAATA+AGG | 0.349876 | 2_2:+30874935 | Msa0247940:CDS |
| TTCAAGTTCTTCAACATCTT+GGG | 0.356079 | 2_2:-30877226 | None:intergenic |
| GCCACTTGAAACATTTAGTT+AGG | 0.365262 | 2_2:-30877500 | None:intergenic |
| CAACAATAAGATTGTATTAA+CGG | 0.374997 | 2_2:+30877334 | Msa0247940:three_prime_UTR |
| CTCTCTGCACACAGATTTAG+TGG | 0.380531 | 2_2:+30871594 | Msa0247940:intron |
| AGGGAAGTCGTGCACAGATC+AGG | 0.381377 | 2_2:+30874760 | Msa0247940:CDS |
| CTTGAAGCAATCCGACCTTT+CGG | 0.382816 | 2_2:-30877075 | None:intergenic |
| AGAGAAAAGACCTTGGGCTT+GGG | 0.388620 | 2_2:-30871444 | None:intergenic |
| TGAAGAACTTGAAAAGAGAT+TGG | 0.400428 | 2_2:+30877236 | Msa0247940:CDS |
| TCCTGGCTCGGCAGCTAGTT+AGG | 0.403556 | 2_2:+30874712 | Msa0247940:CDS |
| AAGAGAAAAGACCTTGGGCT+TGG | 0.425598 | 2_2:-30871445 | None:intergenic |
| GCAAGCACTTCAATCTCTAC+AGG | 0.426499 | 2_2:+30874894 | Msa0247940:CDS |
| CGAAAGGTCGGATTGCTTCA+AGG | 0.442942 | 2_2:+30877076 | Msa0247940:CDS |
| GTACCGCGGGCACCTGCATA+AGG | 0.457143 | 2_2:+30877587 | Msa0247940:three_prime_UTR |
| TTCAATCTCTACAGGGATGA+AGG | 0.458265 | 2_2:+30874902 | Msa0247940:CDS |
| TAGATATAAAGTATAGTTGT+GGG | 0.461951 | 2_2:+30877392 | Msa0247940:three_prime_UTR |
| GAGCTCTTCTGATTCTTCCT+CGG | 0.474103 | 2_2:-30876661 | None:intergenic |
| TGGAGTGGATATTGCATCCC+AGG | 0.474380 | 2_2:+30876802 | Msa0247940:CDS |
| CCTGCAGATTGGTTATCTGT+TGG | 0.475119 | 2_2:-30874740 | None:intergenic |
| AGAGAATTTATTTGCAGCAA+AGG | 0.477800 | 2_2:+30877642 | Msa0247940:three_prime_UTR |
| TGCACGACTTCCCTGCAGAT+TGG | 0.480689 | 2_2:-30874751 | None:intergenic |
| TGGCAGTAAATAAGCCAATT+CGG | 0.482655 | 2_2:+30877519 | Msa0247940:three_prime_UTR |
| ACCTAACTAGCTGCCGAGCC+AGG | 0.485867 | 2_2:-30874713 | None:intergenic |
| GCATCTAGTACCGACCGAAT+TGG | 0.499645 | 2_2:-30877533 | None:intergenic |
| ATATCTATCAACAGCTGTTG+TGG | 0.514661 | 2_2:-30877283 | None:intergenic |
| GAGAAAAGACCTTGGGCTTG+GGG | 0.519987 | 2_2:-30871443 | None:intergenic |
| GGGAAGTCGTGCACAGATCA+GGG | 0.524632 | 2_2:+30874761 | Msa0247940:CDS |
| TGATCTCTTACACCTTATGC+AGG | 0.533086 | 2_2:-30877599 | None:intergenic |
| CCAACAGATAACCAATCTGC+AGG | 0.534723 | 2_2:+30874740 | Msa0247940:CDS |
| ACAGGCTTCTACTAAAATCC+TGG | 0.535270 | 2_2:+30874695 | Msa0247940:intron |
| GATGAACGAACCTTTGGGTG+TGG | 0.536929 | 2_2:-30871693 | None:intergenic |
| AGAGATAGCATCGCTTCAGA+TGG | 0.553224 | 2_2:+30872897 | Msa0247940:CDS |
| TTGAATTCTATCCGTACCGC+GGG | 0.555742 | 2_2:+30877574 | Msa0247940:three_prime_UTR |
| TCTACTGCAGGAAAAGAAGT+TGG | 0.557018 | 2_2:+30872999 | Msa0247940:intron |
| TTAGATATAAAGTATAGTTG+TGG | 0.558039 | 2_2:+30877391 | Msa0247940:three_prime_UTR |
| ATCAGAAGAGCTCACTAACC+AGG | 0.569710 | 2_2:+30876671 | Msa0247940:CDS |
| ATATAATCAGTAACAAAATG+AGG | 0.575315 | 2_2:-30877359 | None:intergenic |
| TCAATCTCTACAGGGATGAA+GGG | 0.583879 | 2_2:+30874903 | Msa0247940:CDS |
| TATCTTCTGCTCCGAAAGGT+CGG | 0.586806 | 2_2:+30877064 | Msa0247940:CDS |
| TAGTTATCTTCTGCTCCGAA+AGG | 0.588512 | 2_2:+30877060 | Msa0247940:intron |
| TTATGCAGGTGCCCGCGGTA+CGG | 0.594541 | 2_2:-30877585 | None:intergenic |
| TCCTAACTAAATGTTTCAAG+TGG | 0.596759 | 2_2:+30877499 | Msa0247940:three_prime_UTR |
| GGTGGCAGAGATTAAAAGAG+AGG | 0.597698 | 2_2:+30873020 | Msa0247940:CDS |
| CTTCTACTAAAATCCTGGCT+CGG | 0.598970 | 2_2:+30874700 | Msa0247940:CDS |
| GATAGCATCGCTTCAGATGG+AGG | 0.601008 | 2_2:+30872900 | Msa0247940:CDS |
| GGTTCTTGATGAAATTGGAG+TGG | 0.601589 | 2_2:+30876787 | Msa0247940:intron |
| CAAGCACTTCAATCTCTACA+GGG | 0.614124 | 2_2:+30874895 | Msa0247940:CDS |
| ACTGCAGGAAAAGAAGTTGG+TGG | 0.614215 | 2_2:+30873002 | Msa0247940:intron |
| AGAAAAGACCTTGGGCTTGG+GGG | 0.618907 | 2_2:-30871442 | None:intergenic |
| GTTGAATTCTATCCGTACCG+CGG | 0.620027 | 2_2:+30877573 | Msa0247940:three_prime_UTR |
| AAGAAGAAAACCACACCCAA+AGG | 0.621044 | 2_2:+30871683 | Msa0247940:CDS |
| GGGTGCCACTAAAGCAATGG+TGG | 0.624027 | 2_2:+30874923 | Msa0247940:CDS |
| GAAGGGTGCCACTAAAGCAA+TGG | 0.625367 | 2_2:+30874920 | Msa0247940:CDS |
| AGTAAATAAGCCAATTCGGT+CGG | 0.630638 | 2_2:+30877523 | Msa0247940:three_prime_UTR |
| ACACCTTATGCAGGTGCCCG+CGG | 0.633532 | 2_2:-30877590 | None:intergenic |
| TTTAGACAAAGATGAAGCCG+AGG | 0.646262 | 2_2:+30876644 | Msa0247940:CDS |
| GAAATGTCTGTAGCAACTAG+AGG | 0.650936 | 2_2:+30871878 | Msa0247940:CDS |
| GGAAGTCGTGCACAGATCAG+GGG | 0.664483 | 2_2:+30874762 | Msa0247940:CDS |
| GGGTGTAGCAACTCACACAC+AGG | 0.671175 | 2_2:+30874782 | Msa0247940:CDS |
| CAACAGATAACCAATCTGCA+GGG | 0.679379 | 2_2:+30874741 | Msa0247940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTCATATATAAAATCAAA+TGG | - | chr2_2:30872159-30872178 | None:intergenic | 10.0% |
| !! | AATATATAACCAAAAGAAAA+AGG | - | chr2_2:30872056-30872075 | None:intergenic | 15.0% |
| !!! | ATTTTTTTCCTATTTAGAAA+GGG | - | chr2_2:30872219-30872238 | None:intergenic | 15.0% |
| !!! | AATTTTTTTCCTATTTAGAA+AGG | - | chr2_2:30872220-30872239 | None:intergenic | 15.0% |
| !!! | ATTTTTTGATTTTAATGAAG+TGG | + | chr2_2:30872755-30872774 | Msa0247940:intron | 15.0% |
| !! | TAAATAAATAGATTTCTAAC+TGG | - | chr2_2:30874448-30874467 | None:intergenic | 15.0% |
| !! | TAATTGTAAATAATAAGCAA+CGG | + | chr2_2:30875824-30875843 | Msa0247940:intron | 15.0% |
| !! | TATAAGAACTAAAATAAGTA+AGG | + | chr2_2:30876112-30876131 | Msa0247940:intron | 15.0% |
| !! | ATAAGAACTAAAATAAGTAA+GGG | + | chr2_2:30876113-30876132 | Msa0247940:intron | 15.0% |
| !! | AAATATATAATCTAATGCTA+TGG | - | chr2_2:30876470-30876489 | None:intergenic | 15.0% |
| !! | AACTAACATAATGAAATATT+GGG | - | chr2_2:30876839-30876858 | None:intergenic | 15.0% |
| !! | TAACTAACATAATGAAATAT+TGG | - | chr2_2:30876840-30876859 | None:intergenic | 15.0% |
| !! | TTTACTTGTATAATTTCTGA+AGG | + | chr2_2:30871978-30871997 | Msa0247940:intron | 20.0% |
| !!! | TTCTTTTGGTTATATATTTC+TGG | + | chr2_2:30872058-30872077 | Msa0247940:intron | 20.0% |
| !!! | ATTTTTTACCCTTTCTAAAT+AGG | + | chr2_2:30872208-30872227 | Msa0247940:intron | 20.0% |
| !!! | TTAGATGTTTTCATCTTAAT+TGG | + | chr2_2:30873104-30873123 | Msa0247940:intron | 20.0% |
| !!! | TAGATGTTTTCATCTTAATT+GGG | + | chr2_2:30873105-30873124 | Msa0247940:intron | 20.0% |
| !! | ACTATAGTTAAAGATTGTAT+TGG | - | chr2_2:30873561-30873580 | None:intergenic | 20.0% |
| !! | AAAAATTGAATTTCAAGCTA+TGG | - | chr2_2:30873603-30873622 | None:intergenic | 20.0% |
| !! | TCATTATCAAAATTCATGAA+TGG | - | chr2_2:30873849-30873868 | None:intergenic | 20.0% |
| !! | ATTTAGAGGAGAATTATATA+GGG | - | chr2_2:30874215-30874234 | None:intergenic | 20.0% |
| !!! | TAATGATTTCTTTTTGCAAA+AGG | - | chr2_2:30874405-30874424 | None:intergenic | 20.0% |
| !!! | TACATTGTTGTCTTTATTTT+TGG | + | chr2_2:30874509-30874528 | Msa0247940:intron | 20.0% |
| !!! | AATTTCCAAATTTCTTTTGT+AGG | + | chr2_2:30874863-30874882 | Msa0247940:intron | 20.0% |
| !!! | AATGAATAAGGTATATTTTC+TGG | + | chr2_2:30874947-30874966 | Msa0247940:intron | 20.0% |
| !!! | ATGAATAAGGTATATTTTCT+GGG | + | chr2_2:30874948-30874967 | Msa0247940:intron | 20.0% |
| !!! | ATTACCAAAATTTTGAACAA+TGG | - | chr2_2:30874987-30875006 | None:intergenic | 20.0% |
| !! | TTAAGTTACTCTTAACATAT+GGG | - | chr2_2:30875103-30875122 | None:intergenic | 20.0% |
| !! | ATATTTATGATTTCTATCCA+TGG | + | chr2_2:30875154-30875173 | Msa0247940:intron | 20.0% |
| !! | ATAAACTAGGAGTTAAATAA+AGG | + | chr2_2:30875792-30875811 | Msa0247940:intron | 20.0% |
| !! | AATTGACAAGTGTAATAAAA+GGG | - | chr2_2:30876370-30876389 | None:intergenic | 20.0% |
| !! | TAATTGACAAGTGTAATAAA+AGG | - | chr2_2:30876371-30876390 | None:intergenic | 20.0% |
| !!! | CGGATAACATTATAAATTTT+TGG | - | chr2_2:30876500-30876519 | None:intergenic | 20.0% |
| !! | ATTACGATAACATAAATTGT+TGG | - | chr2_2:30876588-30876607 | None:intergenic | 20.0% |
| !! | TAAGTTTATCAAATAGTTCA+TGG | + | chr2_2:30876899-30876918 | Msa0247940:intron | 20.0% |
| !!! | TTAATTACTTTTACGAGTAT+TGG | + | chr2_2:30877006-30877025 | Msa0247940:intron | 20.0% |
| !!! | TAATTACTTTTACGAGTATT+GGG | + | chr2_2:30877007-30877026 | Msa0247940:intron | 20.0% |
| !! | AAAAAGAAAAAAACAGAATC+AGG | - | chr2_2:30877033-30877052 | None:intergenic | 20.0% |
| !! | CAACAATAAGATTGTATTAA+CGG | + | chr2_2:30877334-30877353 | Msa0247940:three_prime_UTR | 20.0% |
| !! | ATATAATCAGTAACAAAATG+AGG | - | chr2_2:30877362-30877381 | None:intergenic | 20.0% |
| !! | TTAGATATAAAGTATAGTTG+TGG | + | chr2_2:30877391-30877410 | Msa0247940:three_prime_UTR | 20.0% |
| !! | TAGATATAAAGTATAGTTGT+GGG | + | chr2_2:30877392-30877411 | Msa0247940:three_prime_UTR | 20.0% |
| ! | TGTGAAAATCGTAAGATTTA+GGG | - | chr2_2:30871736-30871755 | None:intergenic | 25.0% |
| ! | ATGTGAAAATCGTAAGATTT+AGG | - | chr2_2:30871737-30871756 | None:intergenic | 25.0% |
| ! | AAAGAAAAAGGTAGAACAAA+AGG | - | chr2_2:30872044-30872063 | None:intergenic | 25.0% |
| !! | TTTGTTCTACCTTTTTCTTT+TGG | + | chr2_2:30872044-30872063 | Msa0247940:intron | 25.0% |
| ! | TTCTGTATGTTGTTAATGTT+TGG | + | chr2_2:30872392-30872411 | Msa0247940:intron | 25.0% |
| ! | ACACAAATAGTTAAAGTTGA+AGG | + | chr2_2:30872421-30872440 | Msa0247940:intron | 25.0% |
| ! | CACAAATAGTTAAAGTTGAA+GGG | + | chr2_2:30872422-30872441 | Msa0247940:intron | 25.0% |
| ! | ACAAATAGTTAAAGTTGAAG+GGG | + | chr2_2:30872423-30872442 | Msa0247940:intron | 25.0% |
| ! | CATCAAATAAAAGGTGATAA+AGG | - | chr2_2:30873418-30873437 | None:intergenic | 25.0% |
| ! | ACAACACTTCATCAAATAAA+AGG | - | chr2_2:30873427-30873446 | None:intergenic | 25.0% |
| !! | ACATGTTCTTGATTTTCTTA+AGG | - | chr2_2:30873942-30873961 | None:intergenic | 25.0% |
| ! | AAAGCTAAAATACTTGTAGT+TGG | - | chr2_2:30874007-30874026 | None:intergenic | 25.0% |
| ! | GATTTAGAGGAGAATTATAT+AGG | - | chr2_2:30874216-30874235 | None:intergenic | 25.0% |
| !! | ATATTCAAAGCATTTCTTCA+TGG | - | chr2_2:30874240-30874259 | None:intergenic | 25.0% |
| !! | GTTTCTTTTTACAACTAGTT+TGG | + | chr2_2:30874358-30874377 | Msa0247940:intron | 25.0% |
| !! | GGATGTTTATGATTGTTATT+AGG | - | chr2_2:30874384-30874403 | None:intergenic | 25.0% |
| ! | CAAAAAGAAATCATTATGCT+AGG | + | chr2_2:30874409-30874428 | Msa0247940:intron | 25.0% |
| ! | TAAATAGATTTCTAACTGGA+TGG | - | chr2_2:30874444-30874463 | None:intergenic | 25.0% |
| !!! | TGTCTTTATTTTTGGTTGAA+TGG | + | chr2_2:30874517-30874536 | Msa0247940:intron | 25.0% |
| !!! | TTTATTTTTGGTTGAATGGA+GGG | + | chr2_2:30874521-30874540 | Msa0247940:intron | 25.0% |
| !!! | TATTCTTCTTTGTTTTCAAG+AGG | + | chr2_2:30874816-30874835 | Msa0247940:intron | 25.0% |
| !!! | ATTCTTCTTTGTTTTCAAGA+GGG | + | chr2_2:30874817-30874836 | Msa0247940:intron | 25.0% |
| ! | TAATGCCTACAAAAGAAATT+TGG | - | chr2_2:30874871-30874890 | None:intergenic | 25.0% |
| !! | CTTTCCATTGTTCAAAATTT+TGG | + | chr2_2:30874980-30874999 | Msa0247940:intron | 25.0% |
| ! | GTTAAGTTACTCTTAACATA+TGG | - | chr2_2:30875104-30875123 | None:intergenic | 25.0% |
| ! | AAGAGTAACTTAACTTTCAT+AGG | + | chr2_2:30875110-30875129 | Msa0247940:intron | 25.0% |
| !!! | CTTTTAGAATTTGTTTGAGA+GGG | + | chr2_2:30875526-30875545 | Msa0247940:intron | 25.0% |
| !!! | TTTTAGAATTTGTTTGAGAG+GGG | + | chr2_2:30875527-30875546 | Msa0247940:intron | 25.0% |
| !! | CCTTCAATTATTTCTTTATC+TGG | - | chr2_2:30875765-30875784 | None:intergenic | 25.0% |
| ! | CCAGATAAAGAAATAATTGA+AGG | + | chr2_2:30875762-30875781 | Msa0247940:intron | 25.0% |
| !! | TTAGTTCTTATACTTTCGTT+TGG | - | chr2_2:30876104-30876123 | None:intergenic | 25.0% |
| !!! | ACATATTTTAAGCTACCAAA+AGG | + | chr2_2:30876168-30876187 | Msa0247940:intron | 25.0% |
| !!! | CATATTTTAAGCTACCAAAA+GGG | + | chr2_2:30876169-30876188 | Msa0247940:intron | 25.0% |
| !!! | ATATTTTAAGCTACCAAAAG+GGG | + | chr2_2:30876170-30876189 | Msa0247940:intron | 25.0% |
| ! | CAGAAAATATAGATGAAACT+TGG | + | chr2_2:30876541-30876560 | Msa0247940:intron | 25.0% |
| ! | ATGAAAATCAGATATGACAA+AGG | - | chr2_2:30876755-30876774 | None:intergenic | 25.0% |
| !! | GATTTTCATTTATTCATGAC+AGG | + | chr2_2:30876766-30876785 | Msa0247940:intron | 25.0% |
| ! | ATTTGATAAACTTAAGCCTT+GGG | - | chr2_2:30876893-30876912 | None:intergenic | 25.0% |
| ! | TATTTGATAAACTTAAGCCT+TGG | - | chr2_2:30876894-30876913 | None:intergenic | 25.0% |
| ! | AATAAGATTGGAGTTTACTT+TGG | - | chr2_2:30877120-30877139 | None:intergenic | 25.0% |
| ! | TCATTCTTCATGAATAAGAT+TGG | - | chr2_2:30877132-30877151 | None:intergenic | 25.0% |
| TTTGTAAGAGAAAAGACCTT+GGG | - | chr2_2:30871453-30871472 | None:intergenic | 30.0% | |
| TAACATTCTCTGCTTCAATT+AGG | + | chr2_2:30871630-30871649 | Msa0247940:five_prime_UTR | 30.0% | |
| !! | TTATATATTTCTGGTAGTCC+AGG | + | chr2_2:30872067-30872086 | Msa0247940:intron | 30.0% |
| CTTTAATGTAACCAATGTGT+CGG | - | chr2_2:30872326-30872345 | None:intergenic | 30.0% | |
| CAAATAGTTAAAGTTGAAGG+GGG | + | chr2_2:30872424-30872443 | Msa0247940:intron | 30.0% | |
| AAATAGTTAAAGTTGAAGGG+GGG | + | chr2_2:30872425-30872444 | Msa0247940:intron | 30.0% | |
| TATGAGTTAGCAAAGCTTTA+TGG | + | chr2_2:30872615-30872634 | Msa0247940:intron | 30.0% | |
| TTCTTACTTCTGATGTTACA+AGG | + | chr2_2:30872795-30872814 | Msa0247940:intron | 30.0% | |
| ! | GCATAACTTTTCTTTCTTGT+AGG | + | chr2_2:30872865-30872884 | Msa0247940:intron | 30.0% |
| ATTAAAAGAGAGGCAAAAAC+TGG | + | chr2_2:30873030-30873049 | Msa0247940:CDS | 30.0% | |
| TTCATCTTAATTGGGATCAA+AGG | + | chr2_2:30873113-30873132 | Msa0247940:intron | 30.0% | |
| GAATAAGTGTACGTTTGATT+CGG | + | chr2_2:30873216-30873235 | Msa0247940:intron | 30.0% | |
| CAGTTGAATTGTCATAATCA+CGG | + | chr2_2:30873239-30873258 | Msa0247940:intron | 30.0% | |
| ACATATTGGGAATGATAGTT+TGG | - | chr2_2:30873302-30873321 | None:intergenic | 30.0% | |
| CAAGATCTTATGGACATATT+GGG | - | chr2_2:30873315-30873334 | None:intergenic | 30.0% | |
| TCAAGATCTTATGGACATAT+TGG | - | chr2_2:30873316-30873335 | None:intergenic | 30.0% | |
| AAAGCAGTTTCAAGATCTTA+TGG | - | chr2_2:30873325-30873344 | None:intergenic | 30.0% | |
| TCTTAAGGACACAGTAAATT+GGG | - | chr2_2:30873927-30873946 | None:intergenic | 30.0% | |
| TTCTTAAGGACACAGTAAAT+TGG | - | chr2_2:30873928-30873947 | None:intergenic | 30.0% | |
| AATCAAGAACATGTTTGCTT+TGG | + | chr2_2:30873948-30873967 | Msa0247940:intron | 30.0% | |
| ATCAAGAACATGTTTGCTTT+GGG | + | chr2_2:30873949-30873968 | Msa0247940:intron | 30.0% | |
| ! | AACAATTGACTTTGACACAA+AGG | - | chr2_2:30874037-30874056 | None:intergenic | 30.0% |
| TTTGTGTCAAAGTCAATTGT+TGG | + | chr2_2:30874036-30874055 | Msa0247940:intron | 30.0% | |
| ATTTCTTCATGGAGATTTAG+AGG | - | chr2_2:30874229-30874248 | None:intergenic | 30.0% | |
| AATTACAAGCAAGAAAGAGT+AGG | + | chr2_2:30874299-30874318 | Msa0247940:intron | 30.0% | |
| AAAAGAAACATTTACACCAG+TGG | - | chr2_2:30874347-30874366 | None:intergenic | 30.0% | |
| AAAGAAATCATTATGCTAGG+CGG | + | chr2_2:30874412-30874431 | Msa0247940:intron | 30.0% | |
| !!! | CTTTATTTTTGGTTGAATGG+AGG | + | chr2_2:30874520-30874539 | Msa0247940:intron | 30.0% |
| ATTTAATAGTGCTTCCAGTT+GGG | - | chr2_2:30874591-30874610 | None:intergenic | 30.0% | |
| AATTTAATAGTGCTTCCAGT+TGG | - | chr2_2:30874592-30874611 | None:intergenic | 30.0% | |
| ! | TAGCTAAATAATGAAGTGTC+TGG | + | chr2_2:30874670-30874689 | Msa0247940:intron | 30.0% |
| !! | TAATGCTTTGTTTGCTTCTT+TGG | - | chr2_2:30875078-30875097 | None:intergenic | 30.0% |
| TTGTATTGAAGTGTAAACCA+TGG | - | chr2_2:30875174-30875193 | None:intergenic | 30.0% | |
| ! | TAATGTGTTAGATGCTTTTC+TGG | + | chr2_2:30875252-30875271 | Msa0247940:intron | 30.0% |
| !!! | GCTTTTAGAATTTGTTTGAG+AGG | + | chr2_2:30875525-30875544 | Msa0247940:intron | 30.0% |
| ! | TTTAGAATTTGTTTGAGAGG+GGG | + | chr2_2:30875528-30875547 | Msa0247940:intron | 30.0% |
| AGACTAATAATTCTCGATTG+TGG | - | chr2_2:30875595-30875614 | None:intergenic | 30.0% | |
| TGAAGGAACAACAATAAACT+AGG | + | chr2_2:30875779-30875798 | Msa0247940:intron | 30.0% | |
| GAAACTTGTCACAACAATTA+GGG | + | chr2_2:30876192-30876211 | Msa0247940:intron | 30.0% | |
| ATTACACTTGTCAATTAGCT+TGG | + | chr2_2:30876374-30876393 | Msa0247940:intron | 30.0% | |
| TCTATTTAAGTACTACCATG+AGG | - | chr2_2:30876441-30876460 | None:intergenic | 30.0% | |
| ATATAATCTAATGCTATGGC+TGG | - | chr2_2:30876466-30876485 | None:intergenic | 30.0% | |
| GTCATTTATTTAGATGTACC+TGG | - | chr2_2:30876692-30876711 | None:intergenic | 30.0% | |
| TTATCAAATAGTTCATGGCA+TGG | + | chr2_2:30876904-30876923 | Msa0247940:intron | 30.0% | |
| ! | ATGTGTTTTCCTAAGAGTTT+AGG | + | chr2_2:30876940-30876959 | Msa0247940:intron | 30.0% |
| !! | TAGACACATCTACTTGTTAT+TGG | + | chr2_2:30877156-30877175 | Msa0247940:intron | 30.0% |
| ! | TTCAAGTTCTTCAACATCTT+GGG | - | chr2_2:30877229-30877248 | None:intergenic | 30.0% |
| !! | TTTCAAGTTCTTCAACATCT+TGG | - | chr2_2:30877230-30877249 | None:intergenic | 30.0% |
| TGAAGAACTTGAAAAGAGAT+TGG | + | chr2_2:30877236-30877255 | Msa0247940:CDS | 30.0% | |
| AATTCTGCGTTTGTTTGTTT+AGG | + | chr2_2:30877447-30877466 | Msa0247940:three_prime_UTR | 30.0% | |
| TCCTAACTAAATGTTTCAAG+TGG | + | chr2_2:30877499-30877518 | Msa0247940:three_prime_UTR | 30.0% | |
| AGAGAATTTATTTGCAGCAA+AGG | + | chr2_2:30877642-30877661 | Msa0247940:three_prime_UTR | 30.0% | |
| GTTTGTAAGAGAAAAGACCT+TGG | - | chr2_2:30871454-30871473 | None:intergenic | 35.0% | |
| ! | TCTCTGCTTCAATTAGGTTT+TGG | + | chr2_2:30871636-30871655 | Msa0247940:five_prime_UTR | 35.0% |
| TAGGGCAAAACAAAACAAGA+GGG | - | chr2_2:30871718-30871737 | None:intergenic | 35.0% | |
| TTAGGGCAAAACAAAACAAG+AGG | - | chr2_2:30871719-30871738 | None:intergenic | 35.0% | |
| !! | AGGTTTGTTAATTCCTGAAG+AGG | + | chr2_2:30871998-30872017 | Msa0247940:intron | 35.0% |
| ! | GTTAATTCCTGAAGAGGTTT+TGG | + | chr2_2:30872004-30872023 | Msa0247940:intron | 35.0% |
| AAGGTAGAACAAAAGGAAGA+GGG | - | chr2_2:30872037-30872056 | None:intergenic | 35.0% | |
| AAAGGTAGAACAAAAGGAAG+AGG | - | chr2_2:30872038-30872057 | None:intergenic | 35.0% | |
| CCAAATTATTACCGTGTTGA+CGG | + | chr2_2:30872358-30872377 | Msa0247940:intron | 35.0% | |
| ATGTTGTTAATGTTTGGCGT+TGG | + | chr2_2:30872398-30872417 | Msa0247940:intron | 35.0% | |
| AATAGTTAAAGTTGAAGGGG+GGG | + | chr2_2:30872426-30872445 | Msa0247940:intron | 35.0% | |
| ! | AGCTTTATGGCACTTACAAA+TGG | + | chr2_2:30872628-30872647 | Msa0247940:intron | 35.0% |
| TGATATCAAGTAAGCTCCAA+TGG | - | chr2_2:30872736-30872755 | None:intergenic | 35.0% | |
| TTATTCCTCAACTAGAGAAG+GGG | - | chr2_2:30873202-30873221 | None:intergenic | 35.0% | |
| CTTATTCCTCAACTAGAGAA+GGG | - | chr2_2:30873203-30873222 | None:intergenic | 35.0% | |
| ACTTATTCCTCAACTAGAGA+AGG | - | chr2_2:30873204-30873223 | None:intergenic | 35.0% | |
| TTGGGAATGATAGTTTGGAT+TGG | - | chr2_2:30873297-30873316 | None:intergenic | 35.0% | |
| !! | ACATCAATTGGTAGCTTTGT+TGG | - | chr2_2:30873367-30873386 | None:intergenic | 35.0% |
| TTACTAAATGTGTGTTCCCT+TGG | - | chr2_2:30873390-30873409 | None:intergenic | 35.0% | |
| ! | AGATTATGAGCATTGCCAAT+AGG | + | chr2_2:30873481-30873500 | Msa0247940:intron | 35.0% |
| TGTAAAAACATTGTTGCCTC+TGG | - | chr2_2:30873664-30873683 | None:intergenic | 35.0% | |
| ! | CAAGCACATATAAGAGTATG+AGG | + | chr2_2:30873684-30873703 | Msa0247940:intron | 35.0% |
| ATGCAGTATTAGTCATCGAT+TGG | - | chr2_2:30873717-30873736 | None:intergenic | 35.0% | |
| TAGCACATTAAGTCAAGAAC+GGG | - | chr2_2:30873781-30873800 | None:intergenic | 35.0% | |
| GTAGCACATTAAGTCAAGAA+CGG | - | chr2_2:30873782-30873801 | None:intergenic | 35.0% | |
| TCATGCATTCCAAATCAGTT+CGG | - | chr2_2:30874634-30874653 | None:intergenic | 35.0% | |
| ! | ATAATGAAGTGTCTGGTTAC+AGG | + | chr2_2:30874677-30874696 | Msa0247940:intron | 35.0% |
| CAATCAGTTTACAACCCAAA+GGG | + | chr2_2:30875019-30875038 | Msa0247940:intron | 35.0% | |
| TTTGTTTGCTTCTTTGGCAA+AGG | - | chr2_2:30875072-30875091 | None:intergenic | 35.0% | |
| ! | ATTTGCTGAGAAGATAAGCA+AGG | - | chr2_2:30875336-30875355 | None:intergenic | 35.0% |
| TTGCTTATCTTCTCAGCAAA+TGG | + | chr2_2:30875335-30875354 | Msa0247940:intron | 35.0% | |
| ! | TTAGAATTTGTTTGAGAGGG+GGG | + | chr2_2:30875529-30875548 | Msa0247940:intron | 35.0% |
| TTTCTCTGGTATTAGACTGT+TGG | + | chr2_2:30875640-30875659 | Msa0247940:intron | 35.0% | |
| TTCTCTGGTATTAGACTGTT+GGG | + | chr2_2:30875641-30875660 | Msa0247940:intron | 35.0% | |
| CGTGGTGCTTAAAAGAAATT+TGG | + | chr2_2:30875716-30875735 | Msa0247940:intron | 35.0% | |
| TTGTAGAACTGTCATCAAGA+TGG | + | chr2_2:30875882-30875901 | Msa0247940:intron | 35.0% | |
| ACTATACTGAAGAGGATAGT+GGG | + | chr2_2:30875952-30875971 | Msa0247940:intron | 35.0% | |
| ! | TCGTTTGGATACTTCACTTT+TGG | - | chr2_2:30876089-30876108 | None:intergenic | 35.0% |
| GGAAACTTGTCACAACAATT+AGG | + | chr2_2:30876191-30876210 | Msa0247940:intron | 35.0% | |
| ! | TACTTTGTTGTACTCAACCA+CGG | + | chr2_2:30876314-30876333 | Msa0247940:intron | 35.0% |
| TGACAGGTTCTTGATGAAAT+TGG | + | chr2_2:30876782-30876801 | Msa0247940:intron | 35.0% | |
| AAGAATCAGTGCAATGACAA+AGG | - | chr2_2:30876987-30877006 | None:intergenic | 35.0% | |
| TGCTTTGTGAATATGCAGAT+CGG | + | chr2_2:30877200-30877219 | Msa0247940:intron | 35.0% | |
| ATATCTATCAACAGCTGTTG+TGG | - | chr2_2:30877286-30877305 | None:intergenic | 35.0% | |
| GCCACTTGAAACATTTAGTT+AGG | - | chr2_2:30877503-30877522 | None:intergenic | 35.0% | |
| TGGCAGTAAATAAGCCAATT+CGG | + | chr2_2:30877519-30877538 | Msa0247940:three_prime_UTR | 35.0% | |
| AGTAAATAAGCCAATTCGGT+CGG | + | chr2_2:30877523-30877542 | Msa0247940:three_prime_UTR | 35.0% | |
| AAGAAGAAAACCACACCCAA+AGG | + | chr2_2:30871683-30871702 | Msa0247940:CDS | 40.0% | |
| GAAATGTCTGTAGCAACTAG+AGG | + | chr2_2:30871878-30871897 | Msa0247940:CDS | 40.0% | |
| !!! | TTCCTGAAGAGGTTTTGGTT+TGG | + | chr2_2:30872009-30872028 | Msa0247940:intron | 40.0% |
| AGGTAGAACAAAAGGAAGAG+GGG | - | chr2_2:30872036-30872055 | None:intergenic | 40.0% | |
| TTAAACAAAGATAGCCCAGC+AGG | - | chr2_2:30872096-30872115 | None:intergenic | 40.0% | |
| CCGTCAACACGGTAATAATT+TGG | - | chr2_2:30872361-30872380 | None:intergenic | 40.0% | |
| CAGACATTTAACCGTCAACA+CGG | - | chr2_2:30872372-30872391 | None:intergenic | 40.0% | |
| TGATTTGAGCCAAGGGTTAA+TGG | + | chr2_2:30872471-30872490 | Msa0247940:intron | 40.0% | |
| TTTACATTTACCTCCCTCCA+AGG | + | chr2_2:30872652-30872671 | Msa0247940:intron | 40.0% | |
| TTACATTTACCTCCCTCCAA+GGG | + | chr2_2:30872653-30872672 | Msa0247940:intron | 40.0% | |
| !!! | TGGACAAGTTTTGGATACAG+AGG | - | chr2_2:30872703-30872722 | None:intergenic | 40.0% |
| !! | TTGGTCTAGTGGACAAGTTT+TGG | - | chr2_2:30872712-30872731 | None:intergenic | 40.0% |
| TCAAGTAAGCTCCAATGGTT+TGG | - | chr2_2:30872731-30872750 | None:intergenic | 40.0% | |
| CTTCTGATGTTACAAGGCTT+TGG | + | chr2_2:30872801-30872820 | Msa0247940:intron | 40.0% | |
| CAAGGCAGTTAAGCACTAAA+AGG | - | chr2_2:30872979-30872998 | None:intergenic | 40.0% | |
| ! | TTCTTTTCCTGCAGTAGACA+AGG | - | chr2_2:30872997-30873016 | None:intergenic | 40.0% |
| TCTACTGCAGGAAAAGAAGT+TGG | + | chr2_2:30872999-30873018 | Msa0247940:intron | 40.0% | |
| AGAGGCAAAAACTGGAAATG+AGG | + | chr2_2:30873038-30873057 | Msa0247940:CDS | 40.0% | |
| TTTGACAAAATCACGGTGTG+GGG | - | chr2_2:30873267-30873286 | None:intergenic | 40.0% | |
| GTTTGACAAAATCACGGTGT+GGG | - | chr2_2:30873268-30873287 | None:intergenic | 40.0% | |
| AGTTTGACAAAATCACGGTG+TGG | - | chr2_2:30873269-30873288 | None:intergenic | 40.0% | |
| CGGTGAGTTTGACAAAATCA+CGG | - | chr2_2:30873274-30873293 | None:intergenic | 40.0% | |
| ! | GGAATGATAGTTTGGATTGG+CGG | - | chr2_2:30873294-30873313 | None:intergenic | 40.0% |
| !! | TTGGTAGCTTTGTTGGTTAC+AGG | - | chr2_2:30873360-30873379 | None:intergenic | 40.0% |
| AAGCTACCAATTGATGTCCA+AGG | + | chr2_2:30873370-30873389 | Msa0247940:intron | 40.0% | |
| AGCTACCAATTGATGTCCAA+GGG | + | chr2_2:30873371-30873390 | Msa0247940:intron | 40.0% | |
| ! | TTATGAGCATTGCCAATAGG+CGG | + | chr2_2:30873484-30873503 | Msa0247940:intron | 40.0% |
| !!! | ATTGCCAATAGGCGGTTTTT+TGG | + | chr2_2:30873492-30873511 | Msa0247940:intron | 40.0% |
| TATGGCTTGAGGAAAATGTC+AGG | - | chr2_2:30873585-30873604 | None:intergenic | 40.0% | |
| GAATTTCAAGCTATGGCTTG+AGG | - | chr2_2:30873596-30873615 | None:intergenic | 40.0% | |
| TCAGTTTCTTACTACTCCAG+AGG | + | chr2_2:30873645-30873664 | Msa0247940:intron | 40.0% | |
| ! | CAGTATTAGTCATCGATTGG+AGG | - | chr2_2:30873714-30873733 | None:intergenic | 40.0% |
| !! | TAGAGGGAATTTTCTGGAAG+TGG | - | chr2_2:30873758-30873777 | None:intergenic | 40.0% |
| TTAAGTCAAGAACGGGTAGA+GGG | - | chr2_2:30873774-30873793 | None:intergenic | 40.0% | |
| ATTAAGTCAAGAACGGGTAG+AGG | - | chr2_2:30873775-30873794 | None:intergenic | 40.0% | |
| ! | ACACAGTAAATTGGGTTGCA+AGG | - | chr2_2:30873919-30873938 | None:intergenic | 40.0% |
| !! | GTTTGCTTTGGGAAATGAAG+AGG | + | chr2_2:30873960-30873979 | Msa0247940:intron | 40.0% |
| TATGTTGAGACGTCTGTTGA+AGG | - | chr2_2:30874067-30874086 | None:intergenic | 40.0% | |
| AACCATCTCTCATGCTTGAT+TGG | - | chr2_2:30874123-30874142 | None:intergenic | 40.0% | |
| GAATAAGAGGTCCTTAGTTG+AGG | - | chr2_2:30874183-30874202 | None:intergenic | 40.0% | |
| AGGGATTCTGCTTGAATAAG+AGG | - | chr2_2:30874196-30874215 | None:intergenic | 40.0% | |
| AAACATTTACACCAGTGGCA+AGG | - | chr2_2:30874342-30874361 | None:intergenic | 40.0% | |
| TGTGTGTATCCGAACTGATT+TGG | + | chr2_2:30874622-30874641 | Msa0247940:intron | 40.0% | |
| ACAGGCTTCTACTAAAATCC+TGG | + | chr2_2:30874695-30874714 | Msa0247940:intron | 40.0% | |
| CTTCTACTAAAATCCTGGCT+CGG | + | chr2_2:30874700-30874719 | Msa0247940:CDS | 40.0% | |
| CAACAGATAACCAATCTGCA+GGG | + | chr2_2:30874741-30874760 | Msa0247940:CDS | 40.0% | |
| CAAGCACTTCAATCTCTACA+GGG | + | chr2_2:30874895-30874914 | Msa0247940:CDS | 40.0% | |
| TTCAATCTCTACAGGGATGA+AGG | + | chr2_2:30874902-30874921 | Msa0247940:CDS | 40.0% | |
| TCAATCTCTACAGGGATGAA+GGG | + | chr2_2:30874903-30874922 | Msa0247940:CDS | 40.0% | |
| AGCAATGGTGGCAATGAATA+AGG | + | chr2_2:30874935-30874954 | Msa0247940:CDS | 40.0% | |
| GCAATCAGTTTACAACCCAA+AGG | + | chr2_2:30875018-30875037 | Msa0247940:intron | 40.0% | |
| ACTTTAGATTCAGTGCAAGC+AGG | - | chr2_2:30875229-30875248 | None:intergenic | 40.0% | |
| CGATTGTGGTGTGCAATTTA+TGG | - | chr2_2:30875581-30875600 | None:intergenic | 40.0% | |
| GTCTAATACCAGAGAAACAC+TGG | - | chr2_2:30875637-30875656 | None:intergenic | 40.0% | |
| ! | TTCTTTTAAGCACCACGCTT+TGG | - | chr2_2:30875713-30875732 | None:intergenic | 40.0% |
| CACTATCCTCTTCAGTATAG+TGG | - | chr2_2:30875953-30875972 | None:intergenic | 40.0% | |
| CACTATACTGAAGAGGATAG+TGG | + | chr2_2:30875951-30875970 | Msa0247940:intron | 40.0% | |
| GTAGATTGTGAGCAATAGAG+AGG | + | chr2_2:30876018-30876037 | Msa0247940:intron | 40.0% | |
| ! | TTGTGACAAGTTTCCCCTTT+TGG | - | chr2_2:30876186-30876205 | None:intergenic | 40.0% |
| TAGGTCACAGGTTCAATTTG+TGG | + | chr2_2:30876232-30876251 | Msa0247940:intron | 40.0% | |
| !! | CATTACCTTGCTTTTGCTAG+AGG | - | chr2_2:30876264-30876283 | None:intergenic | 40.0% |
| CTCTAGCAAAAGCAAGGTAA+TGG | + | chr2_2:30876262-30876281 | Msa0247940:intron | 40.0% | |
| GGTTGAGTACAACAAAGTAC+TGG | - | chr2_2:30876313-30876332 | None:intergenic | 40.0% | |
| CATCATCTCAATCTGCATCT+CGG | - | chr2_2:30876520-30876539 | None:intergenic | 40.0% | |
| TTTAGACAAAGATGAAGCCG+AGG | + | chr2_2:30876644-30876663 | Msa0247940:CDS | 40.0% | |
| GGTTCTTGATGAAATTGGAG+TGG | + | chr2_2:30876787-30876806 | Msa0247940:intron | 40.0% | |
| ATTGGGCTCAAAACAAACCT+GGG | - | chr2_2:30876822-30876841 | None:intergenic | 40.0% | |
| TATTGGGCTCAAAACAAACC+TGG | - | chr2_2:30876823-30876842 | None:intergenic | 40.0% | |
| ! | AAATCACGTGTTTTCACCCA+AGG | + | chr2_2:30876874-30876893 | Msa0247940:intron | 40.0% |
| CCAACTACTCCTAAACTCTT+AGG | - | chr2_2:30876952-30876971 | None:intergenic | 40.0% | |
| CCTAAGAGTTTAGGAGTAGT+TGG | + | chr2_2:30876949-30876968 | Msa0247940:intron | 40.0% | |
| TAGTTATCTTCTGCTCCGAA+AGG | + | chr2_2:30877060-30877079 | Msa0247940:intron | 40.0% | |
| TGATCTCTTACACCTTATGC+AGG | - | chr2_2:30877602-30877621 | None:intergenic | 40.0% | |
| AGAGAAAAGACCTTGGGCTT+GGG | - | chr2_2:30871447-30871466 | None:intergenic | 45.0% | |
| AAGAGAAAAGACCTTGGGCT+TGG | - | chr2_2:30871448-30871467 | None:intergenic | 45.0% | |
| CTCTCTGCACACAGATTTAG+TGG | + | chr2_2:30871594-30871613 | Msa0247940:intron | 45.0% | |
| AGAGGGATGAACGAACCTTT+GGG | - | chr2_2:30871701-30871720 | None:intergenic | 45.0% | |
| AAGAGGGATGAACGAACCTT+TGG | - | chr2_2:30871702-30871721 | None:intergenic | 45.0% | |
| GACCAAACCAAAACCTCTTC+AGG | - | chr2_2:30872014-30872033 | None:intergenic | 45.0% | |
| CATCGACACTTCACACATTG+AGG | + | chr2_2:30872295-30872314 | Msa0247940:intron | 45.0% | |
| TTAAAGTTGAAGGGGGGGTT+GGG | + | chr2_2:30872431-30872450 | Msa0247940:intron | 45.0% | |
| ! | AGCTCATCTGATTTGAGCCA+AGG | + | chr2_2:30872463-30872482 | Msa0247940:intron | 45.0% |
| ! | GCTCATCTGATTTGAGCCAA+GGG | + | chr2_2:30872464-30872483 | Msa0247940:intron | 45.0% |
| TTAATGGAGTTGGAGGTCCT+GGG | + | chr2_2:30872487-30872506 | Msa0247940:intron | 45.0% | |
| !! | GTTTTGGATACAGAGGTTCC+AGG | - | chr2_2:30872696-30872715 | None:intergenic | 45.0% |
| TGTCCACTAGACCAAACCAT+TGG | + | chr2_2:30872717-30872736 | Msa0247940:intron | 45.0% | |
| ! | GGCTTTGGTAGAAGTTAGCA+AGG | + | chr2_2:30872816-30872835 | Msa0247940:intron | 45.0% |
| AGAGATAGCATCGCTTCAGA+TGG | + | chr2_2:30872897-30872916 | Msa0247940:CDS | 45.0% | |
| TTAACTGCCTTGTCTACTGC+AGG | + | chr2_2:30872987-30873006 | Msa0247940:intron | 45.0% | |
| ACTGCAGGAAAAGAAGTTGG+TGG | + | chr2_2:30873002-30873021 | Msa0247940:intron | 45.0% | |
| GGTGGCAGAGATTAAAAGAG+AGG | + | chr2_2:30873020-30873039 | Msa0247940:CDS | 45.0% | |
| GTGTTCCCTTGGACATCAAT+TGG | - | chr2_2:30873379-30873398 | None:intergenic | 45.0% | |
| !! | GGGAATTTTCTGGAAGTGGT+GGG | - | chr2_2:30873754-30873773 | None:intergenic | 45.0% |
| !! | AGGGAATTTTCTGGAAGTGG+TGG | - | chr2_2:30873755-30873774 | None:intergenic | 45.0% |
| ! | AACGGGTAGAGGGAATTTTC+TGG | - | chr2_2:30873764-30873783 | None:intergenic | 45.0% |
| ! | ATGAATGGCCAAGAGTACGA+CGG | - | chr2_2:30873834-30873853 | None:intergenic | 45.0% |
| GGAGTTGCTTATTCGCAACA+AGG | - | chr2_2:30873986-30874005 | None:intergenic | 45.0% | |
| CACCAATCAAGCATGAGAGA+TGG | + | chr2_2:30874118-30874137 | Msa0247940:intron | 45.0% | |
| AATCATTATGCTAGGCGGAG+AGG | + | chr2_2:30874417-30874436 | Msa0247940:intron | 45.0% | |
| ATCATTATGCTAGGCGGAGA+GGG | + | chr2_2:30874418-30874437 | Msa0247940:intron | 45.0% | |
| TACTGTAGTATCTGCCCAAC+TGG | + | chr2_2:30874574-30874593 | Msa0247940:intron | 45.0% | |
| ! | CCTGCAGATTGGTTATCTGT+TGG | - | chr2_2:30874743-30874762 | None:intergenic | 45.0% |
| CCAACAGATAACCAATCTGC+AGG | + | chr2_2:30874740-30874759 | Msa0247940:CDS | 45.0% | |
| GCAAGCACTTCAATCTCTAC+AGG | + | chr2_2:30874894-30874913 | Msa0247940:CDS | 45.0% | |
| CATTGCCACCATTGCTTTAG+TGG | - | chr2_2:30874931-30874950 | None:intergenic | 45.0% | |
| GTTTACAACCCAAAGGGTTG+AGG | + | chr2_2:30875025-30875044 | Msa0247940:intron | 45.0% | |
| ATCTTCTCAGCAAATGGCAC+CGG | + | chr2_2:30875341-30875360 | Msa0247940:intron | 45.0% | |
| ATCACTTTAGCCTGCTTTGC+CGG | - | chr2_2:30875363-30875382 | None:intergenic | 45.0% | |
| ACTACAGTCCAGTGTTTCTC+TGG | + | chr2_2:30875626-30875645 | Msa0247940:intron | 45.0% | |
| GAGCTCTTCTGATTCTTCCT+CGG | - | chr2_2:30876664-30876683 | None:intergenic | 45.0% | |
| ATCAGAAGAGCTCACTAACC+AGG | + | chr2_2:30876671-30876690 | Msa0247940:CDS | 45.0% | |
| TATCTTCTGCTCCGAAAGGT+CGG | + | chr2_2:30877064-30877083 | Msa0247940:CDS | 45.0% | |
| CTTGAAGCAATCCGACCTTT+CGG | - | chr2_2:30877078-30877097 | None:intergenic | 45.0% | |
| GTTGAATTCTATCCGTACCG+CGG | + | chr2_2:30877573-30877592 | Msa0247940:three_prime_UTR | 45.0% | |
| TTGAATTCTATCCGTACCGC+GGG | + | chr2_2:30877574-30877593 | Msa0247940:three_prime_UTR | 45.0% | |
| !!! | ACTTTTTTTTTTTTTTTAAA+TGG | - | chr2_2:30872569-30872588 | None:intergenic | 5.0% |
| AGAAAAGACCTTGGGCTTGG+GGG | - | chr2_2:30871445-30871464 | None:intergenic | 50.0% | |
| GAGAAAAGACCTTGGGCTTG+GGG | - | chr2_2:30871446-30871465 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGACAGA+GGG | - | chr2_2:30871573-30871592 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGACAG+AGG | - | chr2_2:30871574-30871593 | None:intergenic | 50.0% | |
| GATGAACGAACCTTTGGGTG+TGG | - | chr2_2:30871696-30871715 | None:intergenic | 50.0% | |
| TTGAGGTGTGTCCGACACAT+TGG | + | chr2_2:30872312-30872331 | Msa0247940:intron | 50.0% | |
| GTTAAAGTTGAAGGGGGGGT+TGG | + | chr2_2:30872430-30872449 | Msa0247940:intron | 50.0% | |
| GAGCCAAGGGTTAATGGAGT+TGG | + | chr2_2:30872477-30872496 | Msa0247940:intron | 50.0% | |
| CCTCCAACTCCATTAACCCT+TGG | - | chr2_2:30872483-30872502 | None:intergenic | 50.0% | |
| CCAAGGGTTAATGGAGTTGG+AGG | + | chr2_2:30872480-30872499 | Msa0247940:intron | 50.0% | |
| GTTAATGGAGTTGGAGGTCC+TGG | + | chr2_2:30872486-30872505 | Msa0247940:intron | 50.0% | |
| TTTGTCCTGCGTTTGAACCC+AGG | - | chr2_2:30872507-30872526 | None:intergenic | 50.0% | |
| !! | GCTCCAATGGTTTGGTCTAG+TGG | - | chr2_2:30872723-30872742 | None:intergenic | 50.0% |
| GATAGCATCGCTTCAGATGG+AGG | + | chr2_2:30872900-30872919 | Msa0247940:CDS | 50.0% | |
| AACCACCCCTTCTCTAGTTG+AGG | + | chr2_2:30873194-30873213 | Msa0247940:intron | 50.0% | |
| TTCCTCAACTAGAGAAGGGG+TGG | - | chr2_2:30873199-30873218 | None:intergenic | 50.0% | |
| CACGCCAAAAAACCGCCTAT+TGG | - | chr2_2:30873499-30873518 | None:intergenic | 50.0% | |
| ! | TGTAAGTGCCGTCGTACTCT+TGG | + | chr2_2:30873823-30873842 | Msa0247940:intron | 50.0% |
| TGCACACCAGTCCTCAACTA+AGG | + | chr2_2:30874169-30874188 | Msa0247940:intron | 50.0% | |
| AGAGGTCCTTAGTTGAGGAC+TGG | - | chr2_2:30874178-30874197 | None:intergenic | 50.0% | |
| ACCAGTGGCAAGGATGAACA+CGG | - | chr2_2:30874332-30874351 | None:intergenic | 50.0% | |
| !! | GAAGGGTGCCACTAAAGCAA+TGG | + | chr2_2:30874920-30874939 | Msa0247940:CDS | 50.0% |
| CGAGACAACCTCAACCCTTT+GGG | - | chr2_2:30875036-30875055 | None:intergenic | 50.0% | |
| TCGAGACAACCTCAACCCTT+TGG | - | chr2_2:30875037-30875056 | None:intergenic | 50.0% | |
| TGTATGATCCAGCCAAAGCG+TGG | + | chr2_2:30875698-30875717 | Msa0247940:intron | 50.0% | |
| TTTAAGCACCACGCTTTGGC+TGG | - | chr2_2:30875709-30875728 | None:intergenic | 50.0% | |
| !! | TTCAGTATAGTGGCACTGGC+AGG | - | chr2_2:30875943-30875962 | None:intergenic | 50.0% |
| CCTCTTCAGTATAGTGGCAC+TGG | - | chr2_2:30875947-30875966 | None:intergenic | 50.0% | |
| ! | CCAGTGCCACTATACTGAAG+AGG | + | chr2_2:30875944-30875963 | Msa0247940:intron | 50.0% |
| !! | ACTGAAGAGGATAGTGGGTG+TGG | + | chr2_2:30875957-30875976 | Msa0247940:intron | 50.0% |
| GGTTGCACCATGTGACTAGT+AGG | + | chr2_2:30876213-30876232 | Msa0247940:intron | 50.0% | |
| CCTGTGACCTACTAGTCACA+TGG | - | chr2_2:30876223-30876242 | None:intergenic | 50.0% | |
| CCATGTGACTAGTAGGTCAC+AGG | + | chr2_2:30876220-30876239 | Msa0247940:intron | 50.0% | |
| ACCAGCCTCTAGCAAAAGCA+AGG | + | chr2_2:30876256-30876275 | Msa0247940:intron | 50.0% | |
| !! | ACCTTGCTTTTGCTAGAGGC+TGG | - | chr2_2:30876260-30876279 | None:intergenic | 50.0% |
| TCGCTGCGATAGATCTGCAA+TGG | + | chr2_2:30876285-30876304 | Msa0247940:intron | 50.0% | |
| TGTTGTACTCAACCACGGTG+AGG | + | chr2_2:30876319-30876338 | Msa0247940:intron | 50.0% | |
| CTACCATGAGGCTATCAGAC+AGG | - | chr2_2:30876429-30876448 | None:intergenic | 50.0% | |
| TGGAGTGGATATTGCATCCC+AGG | + | chr2_2:30876802-30876821 | Msa0247940:CDS | 50.0% | |
| CGAAAGGTCGGATTGCTTCA+AGG | + | chr2_2:30877076-30877095 | Msa0247940:CDS | 50.0% | |
| !! | GCATCTAGTACCGACCGAAT+TGG | - | chr2_2:30877536-30877555 | None:intergenic | 50.0% |
| ACCGTGTTCATCCTTGCCAC+TGG | + | chr2_2:30874328-30874347 | Msa0247940:intron | 55.0% | |
| TGCACGACTTCCCTGCAGAT+TGG | - | chr2_2:30874754-30874773 | None:intergenic | 55.0% | |
| AGGGAAGTCGTGCACAGATC+AGG | + | chr2_2:30874760-30874779 | Msa0247940:CDS | 55.0% | |
| GGGAAGTCGTGCACAGATCA+GGG | + | chr2_2:30874761-30874780 | Msa0247940:CDS | 55.0% | |
| GGAAGTCGTGCACAGATCAG+GGG | + | chr2_2:30874762-30874781 | Msa0247940:CDS | 55.0% | |
| GGGTGTAGCAACTCACACAC+AGG | + | chr2_2:30874782-30874801 | Msa0247940:CDS | 55.0% | |
| !! | GGGTGCCACTAAAGCAATGG+TGG | + | chr2_2:30874923-30874942 | Msa0247940:CDS | 55.0% |
| ! | GGGTGTGGTTTTTGCGCTTG+AGG | + | chr2_2:30875972-30875991 | Msa0247940:intron | 55.0% |
| ATAAAGCTCTCGCCTCACCG+TGG | - | chr2_2:30876334-30876353 | None:intergenic | 55.0% | |
| GTGCCTGTCTGATAGCCTCA+TGG | + | chr2_2:30876423-30876442 | Msa0247940:intron | 55.0% | |
| ! | GGGGGAGCGTGCTGTGTATT+GGG | - | chr2_2:30871427-30871446 | None:intergenic | 60.0% |
| ! | TGGGGGAGCGTGCTGTGTAT+TGG | - | chr2_2:30871428-30871447 | None:intergenic | 60.0% |
| TGGTAGTCCAGGCTTCCTGC+TGG | + | chr2_2:30872078-30872097 | Msa0247940:intron | 60.0% | |
| GGTAGTCCAGGCTTCCTGCT+GGG | + | chr2_2:30872079-30872098 | Msa0247940:intron | 60.0% | |
| AGATAGCCCAGCAGGAAGCC+TGG | - | chr2_2:30872088-30872107 | None:intergenic | 60.0% | |
| TGAAGGGGGGGTTGGGTACT+TGG | + | chr2_2:30872438-30872457 | Msa0247940:intron | 60.0% | |
| GAAGGGGGGGTTGGGTACTT+GGG | + | chr2_2:30872439-30872458 | Msa0247940:intron | 60.0% | |
| GAGGTCCTGGGTTCAAACGC+AGG | + | chr2_2:30872499-30872518 | Msa0247940:intron | 60.0% | |
| !! | TCCTGGCTCGGCAGCTAGTT+AGG | + | chr2_2:30874712-30874731 | Msa0247940:CDS | 60.0% |
| ACCTAACTAGCTGCCGAGCC+AGG | - | chr2_2:30874716-30874735 | None:intergenic | 60.0% | |
| !! | GCAAATGGCACCGGCAAAGC+AGG | + | chr2_2:30875350-30875369 | Msa0247940:intron | 60.0% |
| TTATGCAGGTGCCCGCGGTA+CGG | - | chr2_2:30877588-30877607 | None:intergenic | 60.0% | |
| ACACCTTATGCAGGTGCCCG+CGG | - | chr2_2:30877593-30877612 | None:intergenic | 60.0% | |
| GTACCGCGGGCACCTGCATA+AGG | + | chr2_2:30877587-30877606 | Msa0247940:three_prime_UTR | 65.0% | |
| AGCACGCTCCCCCAAGCCCA+AGG | + | chr2_2:30871434-30871453 | Msa0247940:five_prime_UTR | 70.0% | |
| !! | CCTCCCTCCAAGGGCACCAG+CGG | + | chr2_2:30872662-30872681 | Msa0247940:intron | 70.0% |
| !! | CTCCCTCCAAGGGCACCAGC+GGG | + | chr2_2:30872663-30872682 | Msa0247940:intron | 70.0% |
| !! | TCCCTCCAAGGGCACCAGCG+GGG | + | chr2_2:30872664-30872683 | Msa0247940:intron | 70.0% |
| GTTCCAGGTTCGAGCCCCGC+TGG | - | chr2_2:30872681-30872700 | None:intergenic | 70.0% | |
| CCGCTGGTGCCCTTGGAGGG+AGG | - | chr2_2:30872665-30872684 | None:intergenic | 75.0% | |
| GCCCCGCTGGTGCCCTTGGA+GGG | - | chr2_2:30872668-30872687 | None:intergenic | 75.0% | |
| AGCCCCGCTGGTGCCCTTGG+AGG | - | chr2_2:30872669-30872688 | None:intergenic | 75.0% | |
| TCGAGCCCCGCTGGTGCCCT+TGG | - | chr2_2:30872672-30872691 | None:intergenic | 75.0% | |
| GCACCAGCGGGGCTCGAACC+TGG | + | chr2_2:30872675-30872694 | Msa0247940:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 30871414 | 30877703 | 30871414 | ID=Msa0247940;Name=Msa0247940 |
| chr2_2 | mRNA | 30871414 | 30877703 | 30871414 | ID=Msa0247940-mRNA-1;Parent=Msa0247940;Name=Msa0247940-mRNA-1;_AED=0.21;_eAED=0.21;_QI=112|0.9|1|1|0.9|0.81|11|425|192 |
| chr2_2 | exon | 30871414 | 30871455 | 30871414 | ID=Msa0247940-mRNA-1:exon:10796;Parent=Msa0247940-mRNA-1 |
| chr2_2 | exon | 30871601 | 30871704 | 30871601 | ID=Msa0247940-mRNA-1:exon:10797;Parent=Msa0247940-mRNA-1 |
| chr2_2 | exon | 30871855 | 30871899 | 30871855 | ID=Msa0247940-mRNA-1:exon:10798;Parent=Msa0247940-mRNA-1 |
| chr2_2 | exon | 30872887 | 30872921 | 30872887 | ID=Msa0247940-mRNA-1:exon:10799;Parent=Msa0247940-mRNA-1 |
| chr2_2 | exon | 30873009 | 30873059 | 30873009 | ID=Msa0247940-mRNA-1:exon:10800;Parent=Msa0247940-mRNA-1 |
| chr2_2 | exon | 30874699 | 30874803 | 30874699 | ID=Msa0247940-mRNA-1:exon:10801;Parent=Msa0247940-mRNA-1 |
| chr2_2 | exon | 30874885 | 30874956 | 30874885 | ID=Msa0247940-mRNA-1:exon:10802;Parent=Msa0247940-mRNA-1 |
| chr2_2 | exon | 30876612 | 30876692 | 30876612 | ID=Msa0247940-mRNA-1:exon:10803;Parent=Msa0247940-mRNA-1 |
| chr2_2 | exon | 30876788 | 30876823 | 30876788 | ID=Msa0247940-mRNA-1:exon:10804;Parent=Msa0247940-mRNA-1 |
| chr2_2 | exon | 30877063 | 30877121 | 30877063 | ID=Msa0247940-mRNA-1:exon:10805;Parent=Msa0247940-mRNA-1 |
| chr2_2 | exon | 30877218 | 30877703 | 30877218 | ID=Msa0247940-mRNA-1:exon:10806;Parent=Msa0247940-mRNA-1 |
| chr2_2 | five_prime_UTR | 30871414 | 30871455 | 30871414 | ID=Msa0247940-mRNA-1:five_prime_utr;Parent=Msa0247940-mRNA-1 |
| chr2_2 | five_prime_UTR | 30871601 | 30871670 | 30871601 | ID=Msa0247940-mRNA-1:five_prime_utr;Parent=Msa0247940-mRNA-1 |
| chr2_2 | CDS | 30871671 | 30871704 | 30871671 | ID=Msa0247940-mRNA-1:cds;Parent=Msa0247940-mRNA-1 |
| chr2_2 | CDS | 30871855 | 30871899 | 30871855 | ID=Msa0247940-mRNA-1:cds;Parent=Msa0247940-mRNA-1 |
| chr2_2 | CDS | 30872887 | 30872921 | 30872887 | ID=Msa0247940-mRNA-1:cds;Parent=Msa0247940-mRNA-1 |
| chr2_2 | CDS | 30873009 | 30873059 | 30873009 | ID=Msa0247940-mRNA-1:cds;Parent=Msa0247940-mRNA-1 |
| chr2_2 | CDS | 30874699 | 30874803 | 30874699 | ID=Msa0247940-mRNA-1:cds;Parent=Msa0247940-mRNA-1 |
| chr2_2 | CDS | 30874885 | 30874956 | 30874885 | ID=Msa0247940-mRNA-1:cds;Parent=Msa0247940-mRNA-1 |
| chr2_2 | CDS | 30876612 | 30876692 | 30876612 | ID=Msa0247940-mRNA-1:cds;Parent=Msa0247940-mRNA-1 |
| chr2_2 | CDS | 30876788 | 30876823 | 30876788 | ID=Msa0247940-mRNA-1:cds;Parent=Msa0247940-mRNA-1 |
| chr2_2 | CDS | 30877063 | 30877121 | 30877063 | ID=Msa0247940-mRNA-1:cds;Parent=Msa0247940-mRNA-1 |
| chr2_2 | CDS | 30877218 | 30877278 | 30877218 | ID=Msa0247940-mRNA-1:cds;Parent=Msa0247940-mRNA-1 |
| chr2_2 | three_prime_UTR | 30877279 | 30877703 | 30877279 | ID=Msa0247940-mRNA-1:three_prime_utr;Parent=Msa0247940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
