AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0447160


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0447160 MtrunA17_Chr3g0088441 92.453 530 10 2 1 500 1 530 0.0 999
Msa0447160 MtrunA17_Chr4g0033311 82.486 531 62 3 1 500 1 531 0.0 910
Msa0447160 MtrunA17_Chr4g0033321 67.311 517 135 4 5 491 4 516 0.0 729
Msa0447160 MtrunA17_Chr4g0033401 69.618 497 120 3 25 491 22 517 0.0 726
Msa0447160 MtrunA17_Chr4g0033331 69.433 494 120 3 25 488 27 519 0.0 725
Msa0447160 MtrunA17_Chr2g0329201 67.490 486 128 2 29 484 22 507 0.0 688
Msa0447160 MtrunA17_Chr6g0482131 63.725 510 154 3 8 486 5 514 0.0 677
Msa0447160 MtrunA17_Chr2g0329191 63.922 510 152 4 6 484 1 509 0.0 676
Msa0447160 MtrunA17_Chr6g0482071 63.548 513 155 3 3 485 4 514 0.0 665
Msa0447160 MtrunA17_Chr4g0033341 63.546 502 149 4 14 484 45 543 0.0 659
Msa0447160 MtrunA17_Chr4g0033201 60.938 512 167 3 3 484 4 512 0.0 658
Msa0447160 MtrunA17_Chr4g0033191 61.492 496 161 2 22 487 27 522 0.0 653
Msa0447160 MtrunA17_Chr4g0033271 61.914 512 159 4 3 484 6 511 0.0 650
Msa0447160 MtrunA17_Chr6g0482081 61.923 520 157 7 1 485 1 514 0.0 635
Msa0447160 MtrunA17_Chr2g0329321 61.728 486 130 3 29 484 29 488 0.0 622
Msa0447160 MtrunA17_Chr4g0033261 57.115 520 162 5 1 485 1 494 0.0 585
Msa0447160 MtrunA17_Chr4g0033231 56.313 499 156 5 23 485 22 494 0.0 564
Msa0447160 MtrunA17_Chr5g0430451 56.107 524 164 5 1 484 1 498 0.0 556
Msa0447160 MtrunA17_Chr4g0010501 53.924 497 193 5 18 484 4 494 0.0 537
Msa0447160 MtrunA17_Chr4g0006111 54.158 493 156 9 34 484 61 525 3.74e-176 505
Msa0447160 MtrunA17_Chr3g0087261 50.588 510 213 8 6 484 8 509 2.15e-171 493
Msa0447160 MtrunA17_Chr4g0006131 52.918 514 165 12 15 483 19 500 2.14e-169 488
Msa0447160 MtrunA17_Chr3g0087271 48.924 511 225 6 4 484 6 510 1.74e-164 475
Msa0447160 MtrunA17_Chr4g0043091 48.065 491 215 8 27 483 18 502 7.28e-161 466
Msa0447160 MtrunA17_Chr4g0042171 46.516 488 225 6 32 486 18 502 5.45e-149 436
Msa0447160 MtrunA17_Chr6g0482941 44.576 507 243 8 9 485 15 513 9.75e-144 422
Msa0447160 MtrunA17_Chr6g0482951 43.689 515 244 9 1 485 15 513 1.06e-141 417
Msa0447160 MtrunA17_Chr2g0301231 53.222 419 129 8 106 484 1 392 5.96e-141 410
Msa0447160 MtrunA17_Chr3g0090111 44.421 484 215 9 38 486 19 483 1.50e-140 413
Msa0447160 MtrunA17_Chr3g0090131 43.750 480 225 8 35 483 18 483 2.41e-138 408
Msa0447160 MtrunA17_Chr4g0074561 42.308 494 237 8 43 496 40 525 1.94e-134 399
Msa0447160 MtrunA17_Chr2g0288071 42.337 522 250 9 6 494 49 552 8.94e-134 398
Msa0447160 MtrunA17_Chr2g0317841 42.589 479 234 8 38 482 32 503 1.95e-129 386
Msa0447160 MtrunA17_Chr4g0074551 43.158 475 234 7 43 485 55 525 6.93e-129 386
Msa0447160 MtrunA17_Chr2g0317821 43.215 479 231 8 38 482 32 503 1.21e-128 384
Msa0447160 MtrunA17_Chr3g0087201 57.321 321 129 3 167 484 29 344 3.95e-128 376
Msa0447160 MtrunA17_Chr2g0288021 41.942 484 245 7 37 488 34 513 2.89e-125 375
Msa0447160 MtrunA17_Chr7g0242691 41.286 482 235 9 37 485 30 496 2.89e-121 365
Msa0447160 MtrunA17_Chr7g0242681 41.322 484 225 11 38 483 38 500 3.27e-119 360
Msa0447160 MtrunA17_Chr4g0006971 39.837 492 248 9 37 495 26 502 9.53e-116 351
Msa0447160 MtrunA17_Chr5g0428831 40.408 490 233 12 32 483 21 489 1.65e-115 350
Msa0447160 MtrunA17_Chr1g0195611 38.596 513 248 11 8 483 6 488 8.36e-112 340
Msa0447160 MtrunA17_Chr7g0234091 39.627 482 237 9 39 487 76 536 3.23e-104 322
Msa0447160 MtrunA17_Chr7g0234111 40.167 478 236 8 39 485 76 534 4.07e-103 319
Msa0447160 MtrunA17_Chr7g0234131 38.542 480 236 9 39 482 76 532 4.98e-99 308
Msa0447160 MtrunA17_Chr5g0418871 48.495 299 121 4 57 325 2 297 1.77e-96 295
Msa0447160 MtrunA17_Chr1g0195641 42.455 391 174 10 40 394 29 404 1.54e-93 290
Msa0447160 MtrunA17_Chr7g0230651 42.234 367 166 7 93 429 26 376 3.96e-83 262
Msa0447160 MtrunA17_Chr3g0087191 60.526 152 56 1 35 182 19 170 2.78e-64 206
Msa0447160 MtrunA17_Chr7g0227561 35.019 257 121 6 40 276 48 278 1.61e-41 150
Msa0447160 MtrunA17_Chr7g0236731 39.316 234 105 4 127 329 28 255 5.83e-40 145
Msa0447160 MtrunA17_Chr5g0418861 48.889 90 45 1 394 482 1 90 2.51e-24 97.1
Msa0447160 MtrunA17_Chr4g0068871 25.183 409 203 13 102 474 183 524 1.60e-22 101
Msa0447160 MtrunA17_Chr8g0352881 38.017 121 62 2 222 329 32 152 3.66e-20 87.4
Msa0447160 MtrunA17_Chr8g0352881 48.571 70 35 1 47 116 7 75 8.64e-14 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0447160 AT5G44640.1 51.758 512 205 6 7 487 6 506 0.0 526
Msa0447160 AT5G42260.1 52.883 503 195 6 7 478 6 497 0.0 524
Msa0447160 AT2G44480.1 52.653 490 199 4 25 482 20 508 0.0 523
Msa0447160 AT2G44480.3 53.249 477 192 3 36 482 64 539 0.0 523
Msa0447160 AT2G44450.1 53.556 478 187 4 38 485 31 503 0.0 518
Msa0447160 AT3G60130.1 52.830 477 189 5 38 483 30 501 7.77e-176 504
Msa0447160 AT2G25630.1 51.471 476 178 6 38 482 30 483 5.02e-168 484
Msa0447160 AT5G24550.1 48.984 492 208 8 38 491 32 518 2.06e-162 471
Msa0447160 AT1G51470.1 48.750 480 202 9 37 484 44 511 2.69e-160 465
Msa0447160 AT3G60140.1 45.808 489 231 6 29 484 17 504 3.26e-157 459
Msa0447160 AT1G47600.1 47.708 480 207 9 37 484 44 511 2.41e-156 455
Msa0447160 AT1G47600.2 47.708 480 206 9 37 484 44 510 1.07e-155 453
Msa0447160 AT3G60120.1 48.140 484 210 9 37 484 13 491 4.05e-155 452
Msa0447160 AT5G24540.1 46.435 519 233 9 9 489 5 516 9.05e-155 451
Msa0447160 AT2G44470.3 45.833 480 226 6 38 484 29 507 1.50e-153 450
Msa0447160 AT2G44490.1 46.888 482 220 7 37 483 13 493 6.42e-153 448
Msa0447160 AT1G26560.1 46.247 493 215 8 30 482 24 506 9.03e-153 446
Msa0447160 AT5G54570.1 46.998 483 213 6 37 482 29 505 1.12e-151 444
Msa0447160 AT2G44480.2 51.351 407 167 3 106 482 1 406 1.32e-149 434
Msa0447160 AT3G18070.3 45.816 478 229 8 33 487 25 495 3.11e-149 436
Msa0447160 AT3G18070.1 45.248 484 229 8 33 487 25 501 4.05e-148 433
Msa0447160 AT3G18080.1 46.914 486 220 8 33 487 34 512 1.32e-147 432
Msa0447160 AT2G44460.1 45.935 492 231 7 34 492 25 514 2.68e-147 434
Msa0447160 AT3G60130.2 51.429 420 168 5 95 483 35 449 2.32e-146 427
Msa0447160 AT5G25980.2 43.074 527 259 11 6 498 19 538 9.24e-144 424
Msa0447160 AT5G36890.1 45.720 479 217 7 40 487 18 484 7.99e-141 414
Msa0447160 AT5G36890.2 45.720 479 217 7 40 487 18 484 8.81e-141 414
Msa0447160 AT3G60130.3 50.238 420 162 6 95 483 35 438 7.25e-139 408
Msa0447160 AT3G21370.1 43.004 486 233 10 37 483 32 512 4.69e-135 401
Msa0447160 AT1G75940.1 43.558 489 234 10 38 487 37 522 4.67e-134 399
Msa0447160 AT3G09260.1 42.355 484 242 8 38 487 35 515 2.62e-133 396
Msa0447160 AT3G03640.1 41.736 484 246 6 36 484 32 514 8.64e-133 395
Msa0447160 AT5G54570.3 46.244 426 191 5 37 428 29 450 5.42e-129 383
Msa0447160 AT2G32860.1 41.031 485 252 6 37 488 93 576 1.31e-128 387
Msa0447160 AT1G52400.3 40.190 525 266 13 1 485 2 518 1.91e-128 384
Msa0447160 AT1G52400.1 40.190 525 266 13 1 485 2 518 1.91e-128 384
Msa0447160 AT2G32860.2 40.909 484 252 6 37 486 93 576 2.85e-127 384
Msa0447160 AT5G26000.1 41.426 519 251 13 7 482 3 511 5.88e-127 380
Msa0447160 AT2G44470.1 43.735 423 205 5 38 428 29 450 5.99e-127 377
Msa0447160 AT1G66280.1 43.461 497 233 13 26 482 22 510 7.93e-127 380
Msa0447160 AT1G66270.1 41.815 507 252 11 24 493 21 521 2.97e-126 378
Msa0447160 AT1G61820.1 41.513 489 250 8 33 488 25 510 6.47e-126 377
Msa0447160 AT5G28510.1 41.176 493 248 9 29 482 30 519 7.81e-126 377
Msa0447160 AT5G24540.2 46.698 424 192 6 38 428 32 454 1.78e-125 374
Msa0447160 AT1G61810.1 42.558 477 238 7 43 486 38 511 4.00e-125 375
Msa0447160 AT1G66270.2 41.420 507 252 12 24 493 21 519 8.77e-123 369
Msa0447160 AT4G21760.2 39.768 518 269 9 3 488 21 527 5.59e-122 368
Msa0447160 AT5G54570.2 45.874 412 184 6 106 482 1 408 9.66e-121 361
Msa0447160 AT1G02850.2 42.029 483 229 11 35 483 21 486 1.73e-120 362
Msa0447160 AT5G25980.3 42.544 456 223 9 6 429 19 467 3.25e-120 361
Msa0447160 AT5G25980.1 42.544 456 223 9 6 429 19 467 3.25e-120 361
Msa0447160 AT1G61810.3 42.581 465 229 7 43 471 38 500 3.82e-120 363
Msa0447160 AT3G60140.2 43.577 397 191 5 29 393 17 412 5.82e-120 360
Msa0447160 AT2G44450.2 49.860 357 144 4 159 485 1 352 8.97e-119 353
Msa0447160 AT4G27830.1 40.787 483 235 9 34 482 19 484 6.66e-118 356
Msa0447160 AT4G21760.1 39.341 516 264 10 3 488 21 517 6.34e-116 352
Msa0447160 AT1G02850.5 40.316 506 228 12 35 483 21 509 7.82e-116 351
Msa0447160 AT3G18070.2 40.959 459 208 8 33 487 25 424 1.06e-115 348
Msa0447160 AT1G02850.4 40.631 507 226 13 35 483 21 510 1.13e-114 348
Msa0447160 AT1G60090.2 39.506 486 240 10 38 489 24 489 1.67e-113 345
Msa0447160 AT2G44480.4 53.333 315 114 4 25 307 51 364 3.42e-111 335
Msa0447160 AT4G22100.1 39.669 484 240 11 40 489 24 489 5.25e-111 338
Msa0447160 AT4G27820.1 41.250 480 229 9 37 482 22 482 1.60e-110 337
Msa0447160 AT1G02850.1 40.580 483 209 12 35 483 21 459 1.18e-109 334
Msa0447160 AT1G60090.1 37.959 490 249 11 38 489 24 496 1.81e-109 335
Msa0447160 AT5G26000.2 40.733 464 224 11 7 429 3 456 3.42e-108 330
Msa0447160 AT3G62750.1 39.004 482 232 10 35 482 20 473 3.49e-108 331
Msa0447160 AT2G44480.5 52.013 298 139 2 188 482 6 302 3.68e-108 324
Msa0447160 AT3G62750.2 38.298 517 254 12 3 482 11 499 7.43e-108 331
Msa0447160 AT1G51490.1 48.256 344 141 6 45 360 27 361 6.68e-107 325
Msa0447160 AT1G45191.4 38.710 496 244 12 39 500 30 499 2.61e-106 327
Msa0447160 AT1G52400.2 39.615 467 235 12 1 428 2 460 1.33e-105 323
Msa0447160 AT2G44470.2 45.075 335 152 4 38 341 29 362 7.11e-105 319
Msa0447160 AT1G45191.2 38.306 496 252 12 39 500 30 505 1.45e-104 322
Msa0447160 AT1G45191.6 38.028 497 257 11 39 500 30 510 1.60e-103 320
Msa0447160 AT1G45191.1 37.673 507 257 12 39 500 30 522 1.67e-101 315
Msa0447160 AT1G61810.5 41.849 411 203 7 109 486 4 411 2.18e-100 308
Msa0447160 AT3G62740.1 36.929 482 247 11 35 482 20 478 2.42e-100 311
Msa0447160 AT3G18070.4 46.130 323 142 5 33 327 25 343 6.47e-98 301
Msa0447160 AT1G61810.4 41.927 384 188 6 43 393 38 419 6.87e-96 297
Msa0447160 AT1G02850.3 41.063 414 179 9 35 393 21 424 7.88e-96 297
Msa0447160 AT3G18070.7 45.570 316 164 5 176 487 1 312 5.36e-93 285
Msa0447160 AT2G44460.2 44.986 369 169 6 157 492 1 368 4.43e-92 287
Msa0447160 AT5G48375.1 38.095 441 175 8 38 447 38 411 7.67e-92 287
Msa0447160 AT3G62750.4 37.419 465 227 11 3 431 11 447 1.29e-90 285
Msa0447160 AT4G27830.2 38.686 411 203 8 106 482 1 396 2.56e-87 275
Msa0447160 AT1G61820.3 40.270 370 186 7 152 488 4 371 2.55e-86 271
Msa0447160 AT3G62740.2 36.768 427 214 10 35 428 20 423 9.44e-85 268
Msa0447160 AT1G45191.5 42.633 319 145 5 39 327 30 340 3.47e-84 266
Msa0447160 AT1G45191.3 42.633 319 145 5 39 327 30 340 5.66e-84 266
Msa0447160 AT3G62750.7 41.056 341 151 7 35 341 20 344 1.11e-83 263
Msa0447160 AT3G62750.8 41.056 341 151 7 35 341 20 344 1.11e-83 263
Msa0447160 AT1G60270.1 40.922 347 164 7 38 351 24 362 2.31e-83 263
Msa0447160 AT3G62750.3 40.762 341 152 6 35 341 46 370 4.99e-83 264
Msa0447160 AT3G18070.5 38.965 367 164 6 33 395 25 335 1.47e-81 257
Msa0447160 AT4G27820.2 38.686 411 204 8 106 482 1 397 6.48e-80 255
Msa0447160 AT4G27820.3 38.686 411 204 8 106 482 1 397 6.48e-80 255
Msa0447160 AT1G61810.2 48.263 259 105 3 43 274 38 294 2.51e-77 245
Msa0447160 AT3G62750.6 36.010 411 206 9 106 482 1 388 4.94e-76 245
Msa0447160 AT3G62750.5 36.010 411 206 9 106 482 1 388 4.94e-76 245
Msa0447160 AT3G18070.6 44.196 224 120 3 176 395 1 223 4.19e-59 195
Msa0447160 AT1G60270.2 39.350 277 131 6 108 351 3 275 4.19e-56 189
Msa0447160 AT5G16580.1 35.192 287 150 9 166 439 36 299 4.10e-41 149
Msa0447160 AT3G06510.2 26.984 441 209 19 101 483 159 544 1.36e-23 105
Msa0447160 AT3G06510.1 26.066 422 203 16 101 483 159 510 4.15e-23 103

Find 97 sgRNAs with CRISPR-Local

Find 168 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGATTGATTTCAGGTTTA+TGG 0.071595 3_3:+24569873 Msa0447160:intron
TATATATACCTGGATATTTA+TGG 0.130865 3_3:-24568076 None:intergenic
TAATTTCATCAACGAGTTAT+TGG 0.184666 3_3:+24568733 Msa0447160:CDS
TTCCCCAAAGGATTTATATT+TGG 0.190969 3_3:+24567734 Msa0447160:CDS
GAACTTTGCTTTAAGGAATT+TGG 0.193613 3_3:+24569179 Msa0447160:intron
TTGATTTACATCACTGAAAA+TGG 0.211288 3_3:+24570412 Msa0447160:CDS
TAGCTACTTGACAGATTCTT+TGG 0.267402 3_3:+24570071 Msa0447160:CDS
GAATCACCACCGGTGCAATT+TGG 0.289089 3_3:-24569308 None:intergenic
GAAACTCAAAAGGGTGTAAT+AGG 0.295734 3_3:+24569577 Msa0447160:CDS
TGGGAAACCTATTGGTATTA+AGG 0.303617 3_3:+24570221 Msa0447160:CDS
TGCTCCAAATATAAATCCTT+TGG 0.329647 3_3:-24567738 None:intergenic
CCATGGAGTTACAGTCAAAA+TGG 0.331262 3_3:+24569236 Msa0447160:CDS
TTGGTGATAGAGTGAAATAT+TGG 0.342182 3_3:+24569198 Msa0447160:CDS
GTGGTAGAACACCAAGTATA+TGG 0.346943 3_3:+24568042 Msa0447160:CDS
TTTATTTATGATTAGTTTGA+AGG 0.349443 3_3:+24568005 Msa0447160:intron
GCTCCAAATATAAATCCTTT+GGG 0.358972 3_3:-24567737 None:intergenic
GTTTACCTTGTAGTTGTGAT+AGG 0.362624 3_3:-24568249 None:intergenic
ATATATACCTGGATATTTAT+GGG 0.366623 3_3:-24568075 None:intergenic
GCACAAGTGCAAAAGCAATT+AGG 0.372097 3_3:-24567631 None:intergenic
TGGTAGTGCGTGACAATATA+GGG 0.377896 3_3:-24569341 None:intergenic
CACCAGGTCGTTGTTCTAGT+TGG 0.391277 3_3:+24569279 Msa0447160:CDS
ATCAACGAGTTATTGGCTAA+TGG 0.391833 3_3:+24568740 Msa0447160:CDS
TTGGTAGTGCGTGACAATAT+AGG 0.392629 3_3:-24569342 None:intergenic
TCGGGTTATTCCGTGAGATT+TGG 0.395849 3_3:+24570820 Msa0447160:CDS
CTTTGTCTTGTACACATTGA+CGG 0.398620 3_3:-24569384 None:intergenic
CTTGTACACATTGACGGCTT+CGG 0.403989 3_3:-24569378 None:intergenic
AAGTGTCCATGAGCGATTCT+TGG 0.413109 3_3:-24570594 None:intergenic
ACATTTGTGGATTACAAGAA+TGG 0.418146 3_3:+24570847 Msa0447160:CDS
TAATTCCAGTTGAGCGAAAT+GGG 0.419967 3_3:+24570202 Msa0447160:intron
GATAATATAGATGACGATAA+TGG 0.420645 3_3:-24570630 None:intergenic
GTATAACCTTGGTAGCTAAC+TGG 0.426224 3_3:+24569599 Msa0447160:CDS
TGGTGATAGAGTGAAATATT+GGG 0.433375 3_3:+24569199 Msa0447160:CDS
TTAATTCCAGTTGAGCGAAA+TGG 0.437258 3_3:+24570201 Msa0447160:intron
ACATGTGCAGGAAACTCAAA+AGG 0.455499 3_3:+24569567 Msa0447160:intron
GAGCGAAATGGGAAACCTAT+TGG 0.456595 3_3:+24570213 Msa0447160:CDS
TTATGCAGATTGCTTCTGAT+TGG 0.460654 3_3:+24570323 Msa0447160:intron
TTTCAGTGATGTAAATCAAC+GGG 0.461224 3_3:-24570408 None:intergenic
AGTCAAAATGGCTATGCAAA+TGG 0.462239 3_3:+24569248 Msa0447160:CDS
TTTATGGATCCACTGACAAC+AGG 0.462467 3_3:+24569889 Msa0447160:CDS
AAAGGATTTATATTTGGAGC+AGG 0.463085 3_3:+24567740 Msa0447160:CDS
GGTCTAGCATTGCTTAGAAA+TGG 0.463232 3_3:-24570048 None:intergenic
TGACGTACCTTAATACCAAT+AGG 0.465150 3_3:-24570228 None:intergenic
TGTGTACAAGACAAAGTATC+AGG 0.470745 3_3:+24569391 Msa0447160:CDS
CATACAGATTCTCCTTATCC+TGG 0.474985 3_3:+24568547 Msa0447160:CDS
AAAAGCATGAGATCCCTTGT+TGG 0.489756 3_3:+24569922 Msa0447160:CDS
AAACAATCTAAGCTACTCAT+TGG 0.490000 3_3:+24569970 Msa0447160:CDS
GAGATTTGGAATGACATTTG+TGG 0.496815 3_3:+24570834 Msa0447160:CDS
GGATAATCTCCTGTTGTCAG+TGG 0.497044 3_3:-24569898 None:intergenic
TTTGAAGGTGCAGCAAATGA+AGG 0.505148 3_3:+24568020 Msa0447160:CDS
ATAATAGAAGGAAAGCTTAG+TGG 0.509606 3_3:+24568677 Msa0447160:intron
ACGTCCAAGGATATTACATA+TGG 0.509867 3_3:+24570770 Msa0447160:CDS
CAAAAGCAATTAGGCAGAGA+AGG 0.515479 3_3:-24567622 None:intergenic
CTTCGGCATGAGCTAAAAGT+TGG 0.521456 3_3:-24569361 None:intergenic
AATCATCAAGGATATGAACT+TGG 0.522377 3_3:+24568521 Msa0447160:CDS
TGGTAGAACACCAAGTATAT+GGG 0.523979 3_3:+24568043 Msa0447160:CDS
AGGACCATATGTAATATCCT+TGG 0.529150 3_3:-24570774 None:intergenic
GTAATTAATTACCTGGTATG+AGG 0.530752 3_3:-24567768 None:intergenic
CAATATTCTAGACCAGGATA+AGG 0.535004 3_3:-24568559 None:intergenic
GTAGTTGTGATAGGAATCAA+TGG 0.537086 3_3:-24568240 None:intergenic
AGCAGGATCTTCCTCATACC+AGG 0.542249 3_3:+24567757 Msa0447160:CDS
AAAGAATCTGTCAAGTAGCT+AGG 0.542781 3_3:-24570069 None:intergenic
ACTTTCACCCATAAATATCC+AGG 0.543624 3_3:+24568068 Msa0447160:CDS
TTGGTAATCTTGCTCCAACA+AGG 0.556284 3_3:-24569936 None:intergenic
CTCAATCGCGGAATCACCAC+CGG 0.558060 3_3:-24569318 None:intergenic
ACGAGAAACTTTCTGCATTG+TGG 0.561392 3_3:+24570881 Msa0447160:CDS
TGGTAATCTTGCTCCAACAA+GGG 0.565723 3_3:-24569935 None:intergenic
GCAAATGGACGAATGGCACC+AGG 0.570578 3_3:+24569263 Msa0447160:CDS
GGAAGATGTTAGAATCATCA+AGG 0.575017 3_3:+24568509 Msa0447160:intron
ATCGGTCCAAGAATCGCTCA+TGG 0.576413 3_3:+24570588 Msa0447160:CDS
AATGAAGCAACATCAAGAAG+TGG 0.577727 3_3:-24567698 None:intergenic
AGTAGAAACAGTTTCCCCAA+AGG 0.582354 3_3:+24567722 Msa0447160:CDS
GTGAAAGTATCCCATATACT+TGG 0.583793 3_3:-24568053 None:intergenic
GTACAGTGATCCTACACTAT+CGG 0.588636 3_3:+24570570 Msa0447160:CDS
TGGCTATGCAAATGGACGAA+TGG 0.589653 3_3:+24569256 Msa0447160:CDS
GCTTAGAAATGGTGCATCTG+AGG 0.591574 3_3:-24570037 None:intergenic
TGGTTGAATCCAAATTGCAC+CGG 0.596108 3_3:+24569299 Msa0447160:CDS
AAATGTCATTCCAAATCTCA+CGG 0.598464 3_3:-24570830 None:intergenic
CTCCAAATATAAATCCTTTG+GGG 0.598486 3_3:-24567736 None:intergenic
CAAGTACCAGTTAGCTACCA+AGG 0.611246 3_3:-24569605 None:intergenic
AGTGGTGGCATAAATCAAGA+AGG 0.614322 3_3:+24568695 Msa0447160:CDS
ACTTGGCAATATTCTAGACC+AGG 0.618905 3_3:-24568565 None:intergenic
AGAAGATCACGAATTCCTCT+CGG 0.618923 3_3:-24570358 None:intergenic
GGGTTACTTTGAATGAACCA+TGG 0.621045 3_3:+24569219 Msa0447160:CDS
AGGCAAGGTGCAAACGTCCA+AGG 0.624303 3_3:+24570757 Msa0447160:intron
GACAATATAGGGCTCAATCG+CGG 0.624861 3_3:-24569330 None:intergenic
CCATTCAAAATTGTCGAACA+AGG 0.625604 3_3:-24570794 None:intergenic
TGGTTGTATGTTTATCCGAG+AGG 0.627108 3_3:+24570343 Msa0447160:CDS
CATGTGCAGGAAACTCAAAA+GGG 0.627665 3_3:+24569568 Msa0447160:intron
TCAGATTTGGAATCTGAGAG+TGG 0.642241 3_3:-24569628 None:intergenic
GGGTGTAATAGGTATAACCT+TGG 0.642396 3_3:+24569588 Msa0447160:CDS
TGATCTTCTGTTATACACCA+AGG 0.647502 3_3:+24570372 Msa0447160:CDS
ATAGAAGGAAAGCTTAGTGG+TGG 0.648918 3_3:+24568680 Msa0447160:intron
TGATTCCTATCACAACTACA+AGG 0.656101 3_3:+24568244 Msa0447160:CDS
GATTCTTGGACCGATAGTGT+AGG 0.670328 3_3:-24570580 None:intergenic
TTGAATCCAAATTGCACCGG+TGG 0.672179 3_3:+24569302 Msa0447160:CDS
GAAGGTGCAGCAAATGAAGG+TGG 0.681013 3_3:+24568023 Msa0447160:CDS
AACCAACTAGAACAACGACC+TGG 0.698527 3_3:-24569281 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAATTTTATATATATACC+TGG - chr3_3:24568089-24568108 None:intergenic 10.0%
!!! AATAAATTGTCAATAATTTT+AGG + chr3_3:24568832-24568851 Msa0447160:intron 10.0%
!!! TTTATTTATGATTAGTTTGA+AGG + chr3_3:24568005-24568024 Msa0447160:intron 15.0%
!!! TTGTTGTTCATATATATTAT+AGG + chr3_3:24568488-24568507 Msa0447160:intron 15.0%
!! TTATCAATATTAAACTTACT+TGG - chr3_3:24568585-24568604 None:intergenic 15.0%
!!! GATATATATTTTACTTCATT+CGG - chr3_3:24569102-24569121 None:intergenic 15.0%
!! TTCTATTTAAAGACATTAAA+CGG + chr3_3:24569516-24569535 Msa0447160:intron 15.0%
!!! TTTTAAAAAGCAAAAAATCA+TGG + chr3_3:24569756-24569775 Msa0447160:intron 15.0%
!!! AAAAATCATGGATTAATATT+AGG + chr3_3:24569768-24569787 Msa0447160:intron 15.0%
!! ACTAAATATGATATATAGTT+AGG - chr3_3:24570446-24570465 None:intergenic 15.0%
!!! CTCATTTTAAATCATCAAAT+TGG - chr3_3:24567795-24567814 None:intergenic 20.0%
!! ATATATACCTGGATATTTAT+GGG - chr3_3:24568078-24568097 None:intergenic 20.0%
!! TATATATACCTGGATATTTA+TGG - chr3_3:24568079-24568098 None:intergenic 20.0%
!!! GTAATATTGATTTTGTGTTT+AGG + chr3_3:24568444-24568463 Msa0447160:intron 20.0%
!! AACTATTTATCCATAATAGA+AGG + chr3_3:24568665-24568684 Msa0447160:intron 20.0%
!! ATCATCAACAACAAAATATA+GGG - chr3_3:24568809-24568828 None:intergenic 20.0%
!!! AATTTTAGGTATAAAACCAT+TGG + chr3_3:24568846-24568865 Msa0447160:intron 20.0%
!!! AAATAAATCAAAAAGTGTGA+GGG - chr3_3:24569712-24569731 None:intergenic 20.0%
!!! AAAATAAATCAAAAAGTGTG+AGG - chr3_3:24569713-24569732 None:intergenic 20.0%
!! GATATGGTTAAATGAATTTA+TGG + chr3_3:24569831-24569850 Msa0447160:intron 20.0%
!!! ATTGGTTCATTTGATTTTAT+TGG + chr3_3:24569988-24570007 Msa0447160:CDS 20.0%
! AATTGGAGTAATTAATTACC+TGG - chr3_3:24567778-24567797 None:intergenic 25.0%
! TGCATTACACTTATATCTAA+GGG + chr3_3:24568364-24568383 Msa0447160:intron 25.0%
! TAATTTCATCAACGAGTTAT+TGG + chr3_3:24568733-24568752 Msa0447160:CDS 25.0%
! GATCATCAACAACAAAATAT+AGG - chr3_3:24568810-24568829 None:intergenic 25.0%
! ATGTCTCTTATAAATAAGAC+AGG - chr3_3:24568993-24569012 None:intergenic 25.0%
! TGATGTATCTGGTTAAAAAT+TGG - chr3_3:24569044-24569063 None:intergenic 25.0%
! TCAACAAAAATTGATGTATC+TGG - chr3_3:24569055-24569074 None:intergenic 25.0%
!!! TGGAAATCTTTTCTGAAAAA+TGG - chr3_3:24569149-24569168 None:intergenic 25.0%
! AAAAGTCTAACAATTGTTTG+AGG - chr3_3:24569443-24569462 None:intergenic 25.0%
! AGTAGATAATTTATCGACAA+CGG + chr3_3:24569482-24569501 Msa0447160:intron 25.0%
! TATTTATATGTTACATGTGC+AGG + chr3_3:24569555-24569574 Msa0447160:intron 25.0%
!! ATGGATTAATATTAGGACTA+TGG + chr3_3:24569775-24569794 Msa0447160:intron 25.0%
! TATGGTTTATAGACATTTCT+AGG + chr3_3:24569793-24569812 Msa0447160:intron 25.0%
!! GTCATATATTTTTCGTGATA+TGG + chr3_3:24569815-24569834 Msa0447160:intron 25.0%
!! ATCAAAAGTTGATTGATTTC+AGG + chr3_3:24569866-24569885 Msa0447160:intron 25.0%
!!! GATTGTTTTGCATTGAATTT+TGG - chr3_3:24569958-24569977 None:intergenic 25.0%
!! TTGCATATCTTTTCTATTTG+TGG + chr3_3:24570178-24570197 Msa0447160:intron 25.0%
!! TTTTCAGTGATGTAAATCAA+CGG - chr3_3:24570412-24570431 None:intergenic 25.0%
! TTGATTTACATCACTGAAAA+TGG + chr3_3:24570412-24570431 Msa0447160:CDS 25.0%
! GATAATATAGATGACGATAA+TGG - chr3_3:24570633-24570652 None:intergenic 25.0%
! TAGAACATCGTTAAATTGAT+TGG - chr3_3:24570714-24570733 None:intergenic 25.0%
TTCCCCAAAGGATTTATATT+TGG + chr3_3:24567734-24567753 Msa0447160:CDS 30.0%
CTCCAAATATAAATCCTTTG+GGG - chr3_3:24567739-24567758 None:intergenic 30.0%
GCTCCAAATATAAATCCTTT+GGG - chr3_3:24567740-24567759 None:intergenic 30.0%
TGCTCCAAATATAAATCCTT+TGG - chr3_3:24567741-24567760 None:intergenic 30.0%
! AAAGGATTTATATTTGGAGC+AGG + chr3_3:24567740-24567759 Msa0447160:CDS 30.0%
GTAATTAATTACCTGGTATG+AGG - chr3_3:24567771-24567790 None:intergenic 30.0%
GTGCATTACACTTATATCTA+AGG + chr3_3:24568363-24568382 Msa0447160:intron 30.0%
AATCATCAAGGATATGAACT+TGG + chr3_3:24568521-24568540 Msa0447160:CDS 30.0%
ACTAAGCTTTCCTTCTATTA+TGG - chr3_3:24568678-24568697 None:intergenic 30.0%
ATAATAGAAGGAAAGCTTAG+TGG + chr3_3:24568677-24568696 Msa0447160:intron 30.0%
!!! ATTGGTGACACTTTTTCATT+GGG + chr3_3:24568864-24568883 Msa0447160:CDS 30.0%
!! ACTCATCTTCTAAAACTTGT+GGG - chr3_3:24568894-24568913 None:intergenic 30.0%
!! TACTCATCTTCTAAAACTTG+TGG - chr3_3:24568895-24568914 None:intergenic 30.0%
!!! CAAGTTTTAGAAGATGAGTA+TGG + chr3_3:24568895-24568914 Msa0447160:intron 30.0%
CTCTTATAAATAAGACAGGA+GGG - chr3_3:24568989-24569008 None:intergenic 30.0%
TCTCTTATAAATAAGACAGG+AGG - chr3_3:24568990-24569009 None:intergenic 30.0%
!! GAACTTTGCTTTAAGGAATT+TGG + chr3_3:24569179-24569198 Msa0447160:intron 30.0%
! TTGGTGATAGAGTGAAATAT+TGG + chr3_3:24569198-24569217 Msa0447160:CDS 30.0%
TGGTGATAGAGTGAAATATT+GGG + chr3_3:24569199-24569218 Msa0447160:CDS 30.0%
!! GTTGATTGATTTCAGGTTTA+TGG + chr3_3:24569873-24569892 Msa0447160:intron 30.0%
AAACAATCTAAGCTACTCAT+TGG + chr3_3:24569970-24569989 Msa0447160:CDS 30.0%
! GAAATTAGTTTCTTACATGC+TGG - chr3_3:24570102-24570121 None:intergenic 30.0%
TAGTAAGAGAACTCATAGAA+TGG - chr3_3:24570127-24570146 None:intergenic 30.0%
TTTCAGTGATGTAAATCAAC+GGG - chr3_3:24570411-24570430 None:intergenic 30.0%
GACGTGCATAATTTACTTAT+AGG + chr3_3:24570538-24570557 Msa0447160:intron 30.0%
TAGTCTCTTACATCTCTAAA+AGG + chr3_3:24570674-24570693 Msa0447160:intron 30.0%
CTGTCATACATAAAGGAAAA+TGG - chr3_3:24570739-24570758 None:intergenic 30.0%
! CATTTTCCTTTATGTATGAC+AGG + chr3_3:24570737-24570756 Msa0447160:intron 30.0%
AAATGTCATTCCAAATCTCA+CGG - chr3_3:24570833-24570852 None:intergenic 30.0%
! ACATTTGTGGATTACAAGAA+TGG + chr3_3:24570847-24570866 Msa0447160:CDS 30.0%
AATGAAGCAACATCAAGAAG+TGG - chr3_3:24567701-24567720 None:intergenic 35.0%
TGGTAGAACACCAAGTATAT+GGG + chr3_3:24568043-24568062 Msa0447160:CDS 35.0%
!! GTGAAAGTATCCCATATACT+TGG - chr3_3:24568056-24568075 None:intergenic 35.0%
ACTTTCACCCATAAATATCC+AGG + chr3_3:24568068-24568087 Msa0447160:CDS 35.0%
GTAGTTGTGATAGGAATCAA+TGG - chr3_3:24568243-24568262 None:intergenic 35.0%
TGATTCCTATCACAACTACA+AGG + chr3_3:24568244-24568263 Msa0447160:CDS 35.0%
GTTTACCTTGTAGTTGTGAT+AGG - chr3_3:24568252-24568271 None:intergenic 35.0%
GGAAGATGTTAGAATCATCA+AGG + chr3_3:24568509-24568528 Msa0447160:intron 35.0%
CAATATTCTAGACCAGGATA+AGG - chr3_3:24568562-24568581 None:intergenic 35.0%
! ATCAACGAGTTATTGGCTAA+TGG + chr3_3:24568740-24568759 Msa0447160:CDS 35.0%
!! CAATGAAAAAGTGTCACCAA+TGG - chr3_3:24568865-24568884 None:intergenic 35.0%
!!! CATTGGTGACACTTTTTCAT+TGG + chr3_3:24568863-24568882 Msa0447160:CDS 35.0%
!!! GTTTTAGAAGATGAGTATGG+TGG + chr3_3:24568898-24568917 Msa0447160:intron 35.0%
TAGAAACTCACACTATGAGA+GGG - chr3_3:24568933-24568952 None:intergenic 35.0%
TTAGAAACTCACACTATGAG+AGG - chr3_3:24568934-24568953 None:intergenic 35.0%
CTATGCTGAACTTTGCTTTA+AGG + chr3_3:24569172-24569191 Msa0447160:intron 35.0%
AGTCAAAATGGCTATGCAAA+TGG + chr3_3:24569248-24569267 Msa0447160:CDS 35.0%
CTTTGTCTTGTACACATTGA+CGG - chr3_3:24569387-24569406 None:intergenic 35.0%
! TGTGTACAAGACAAAGTATC+AGG + chr3_3:24569391-24569410 Msa0447160:CDS 35.0%
! GAAACTCAAAAGGGTGTAAT+AGG + chr3_3:24569577-24569596 Msa0447160:CDS 35.0%
! AGCAGCTTTTTGATCAGATT+TGG - chr3_3:24569644-24569663 None:intergenic 35.0%
!! AGAGCTGTTGATTTCATGTA+TGG + chr3_3:24569667-24569686 Msa0447160:intron 35.0%
!! CTGTTGATTTCATGTATGGA+TGG + chr3_3:24569671-24569690 Msa0447160:intron 35.0%
AAAGAATCTGTCAAGTAGCT+AGG - chr3_3:24570072-24570091 None:intergenic 35.0%
TAGCTACTTGACAGATTCTT+TGG + chr3_3:24570071-24570090 Msa0447160:CDS 35.0%
TTAATTCCAGTTGAGCGAAA+TGG + chr3_3:24570201-24570220 Msa0447160:intron 35.0%
TAATTCCAGTTGAGCGAAAT+GGG + chr3_3:24570202-24570221 Msa0447160:intron 35.0%
TGGGAAACCTATTGGTATTA+AGG + chr3_3:24570221-24570240 Msa0447160:CDS 35.0%
TGACGTACCTTAATACCAAT+AGG - chr3_3:24570231-24570250 None:intergenic 35.0%
CAGCAAAATCGTTAGAAGAA+AGG - chr3_3:24570260-24570279 None:intergenic 35.0%
! CTTTCTTCTAACGATTTTGC+TGG + chr3_3:24570258-24570277 Msa0447160:intron 35.0%
TTATGCAGATTGCTTCTGAT+TGG + chr3_3:24570323-24570342 Msa0447160:intron 35.0%
TGATCTTCTGTTATACACCA+AGG + chr3_3:24570372-24570391 Msa0447160:CDS 35.0%
ACGTCCAAGGATATTACATA+TGG + chr3_3:24570770-24570789 Msa0447160:CDS 35.0%
AGGACCATATGTAATATCCT+TGG - chr3_3:24570777-24570796 None:intergenic 35.0%
CCATTCAAAATTGTCGAACA+AGG - chr3_3:24570797-24570816 None:intergenic 35.0%
! CCTTGTTCGACAATTTTGAA+TGG + chr3_3:24570794-24570813 Msa0447160:CDS 35.0%
! GAGATTTGGAATGACATTTG+TGG + chr3_3:24570834-24570853 Msa0447160:CDS 35.0%
CAAAAGCAATTAGGCAGAGA+AGG - chr3_3:24567625-24567644 None:intergenic 40.0%
GCACAAGTGCAAAAGCAATT+AGG - chr3_3:24567634-24567653 None:intergenic 40.0%
AGTAGAAACAGTTTCCCCAA+AGG + chr3_3:24567722-24567741 Msa0447160:CDS 40.0%
! TTTGAAGGTGCAGCAAATGA+AGG + chr3_3:24568020-24568039 Msa0447160:CDS 40.0%
GTGGTAGAACACCAAGTATA+TGG + chr3_3:24568042-24568061 Msa0447160:CDS 40.0%
CATACAGATTCTCCTTATCC+TGG + chr3_3:24568547-24568566 Msa0447160:CDS 40.0%
ACTTGGCAATATTCTAGACC+AGG - chr3_3:24568568-24568587 None:intergenic 40.0%
ATAGAAGGAAAGCTTAGTGG+TGG + chr3_3:24568680-24568699 Msa0447160:intron 40.0%
AGTGGTGGCATAAATCAAGA+AGG + chr3_3:24568695-24568714 Msa0447160:CDS 40.0%
AGCAAAGTTCAGCATAGTCT+TGG - chr3_3:24569169-24569188 None:intergenic 40.0%
! GGGTTACTTTGAATGAACCA+TGG + chr3_3:24569219-24569238 Msa0447160:CDS 40.0%
!!! CCATTTTGACTGTAACTCCA+TGG - chr3_3:24569239-24569258 None:intergenic 40.0%
CCATGGAGTTACAGTCAAAA+TGG + chr3_3:24569236-24569255 Msa0447160:CDS 40.0%
TGGTTGAATCCAAATTGCAC+CGG + chr3_3:24569299-24569318 Msa0447160:CDS 40.0%
! TGGTAGTGCGTGACAATATA+GGG - chr3_3:24569344-24569363 None:intergenic 40.0%
!! TTGGTAGTGCGTGACAATAT+AGG - chr3_3:24569345-24569364 None:intergenic 40.0%
ACATGTGCAGGAAACTCAAA+AGG + chr3_3:24569567-24569586 Msa0447160:intron 40.0%
CATGTGCAGGAAACTCAAAA+GGG + chr3_3:24569568-24569587 Msa0447160:intron 40.0%
GGGTGTAATAGGTATAACCT+TGG + chr3_3:24569588-24569607 Msa0447160:CDS 40.0%
! GTATAACCTTGGTAGCTAAC+TGG + chr3_3:24569599-24569618 Msa0447160:CDS 40.0%
! TCAGATTTGGAATCTGAGAG+TGG - chr3_3:24569631-24569650 None:intergenic 40.0%
TTTATGGATCCACTGACAAC+AGG + chr3_3:24569889-24569908 Msa0447160:CDS 40.0%
! ACAAGGGATCTCATGCTTTT+TGG - chr3_3:24569922-24569941 None:intergenic 40.0%
! AAAAGCATGAGATCCCTTGT+TGG + chr3_3:24569922-24569941 Msa0447160:CDS 40.0%
TGGTAATCTTGCTCCAACAA+GGG - chr3_3:24569938-24569957 None:intergenic 40.0%
! TTGGTAATCTTGCTCCAACA+AGG - chr3_3:24569939-24569958 None:intergenic 40.0%
GGTCTAGCATTGCTTAGAAA+TGG - chr3_3:24570051-24570070 None:intergenic 40.0%
TGGTTGTATGTTTATCCGAG+AGG + chr3_3:24570343-24570362 Msa0447160:CDS 40.0%
AGAAGATCACGAATTCCTCT+CGG - chr3_3:24570361-24570380 None:intergenic 40.0%
! CGGGTTATTGTACTTTTCCT+TGG - chr3_3:24570392-24570411 None:intergenic 40.0%
GTACAGTGATCCTACACTAT+CGG + chr3_3:24570570-24570589 Msa0447160:CDS 40.0%
TCCTTTATGTATGACAGGCA+AGG + chr3_3:24570742-24570761 Msa0447160:intron 40.0%
ACCTTGCCTGTCATACATAA+AGG - chr3_3:24570746-24570765 None:intergenic 40.0%
! CGACAATTTTGAATGGTGCT+CGG + chr3_3:24570801-24570820 Msa0447160:CDS 40.0%
! GACAATTTTGAATGGTGCTC+GGG + chr3_3:24570802-24570821 Msa0447160:CDS 40.0%
ACGAGAAACTTTCTGCATTG+TGG + chr3_3:24570881-24570900 Msa0447160:CDS 40.0%
TGGCTATGCAAATGGACGAA+TGG + chr3_3:24569256-24569275 Msa0447160:CDS 45.0%
AACCAACTAGAACAACGACC+TGG - chr3_3:24569284-24569303 None:intergenic 45.0%
TTGAATCCAAATTGCACCGG+TGG + chr3_3:24569302-24569321 Msa0447160:CDS 45.0%
GACAATATAGGGCTCAATCG+CGG - chr3_3:24569333-24569352 None:intergenic 45.0%
CTTCGGCATGAGCTAAAAGT+TGG - chr3_3:24569364-24569383 None:intergenic 45.0%
CTTGTACACATTGACGGCTT+CGG - chr3_3:24569381-24569400 None:intergenic 45.0%
CAAGTACCAGTTAGCTACCA+AGG - chr3_3:24569608-24569627 None:intergenic 45.0%
GGATAATCTCCTGTTGTCAG+TGG - chr3_3:24569901-24569920 None:intergenic 45.0%
GCTTAGAAATGGTGCATCTG+AGG - chr3_3:24570040-24570059 None:intergenic 45.0%
GAGCGAAATGGGAAACCTAT+TGG + chr3_3:24570213-24570232 Msa0447160:CDS 45.0%
GATTCTTGGACCGATAGTGT+AGG - chr3_3:24570583-24570602 None:intergenic 45.0%
AAGTGTCCATGAGCGATTCT+TGG - chr3_3:24570597-24570616 None:intergenic 45.0%
TCGGGTTATTCCGTGAGATT+TGG + chr3_3:24570820-24570839 Msa0447160:CDS 45.0%
AGCAGGATCTTCCTCATACC+AGG + chr3_3:24567757-24567776 Msa0447160:CDS 50.0%
! GAAGGTGCAGCAAATGAAGG+TGG + chr3_3:24568023-24568042 Msa0447160:CDS 50.0%
CACCAGGTCGTTGTTCTAGT+TGG + chr3_3:24569279-24569298 Msa0447160:CDS 50.0%
GAATCACCACCGGTGCAATT+TGG - chr3_3:24569311-24569330 None:intergenic 50.0%
GGTTTCCCATTTCGCTCAAC+TGG - chr3_3:24570210-24570229 None:intergenic 50.0%
ATCGGTCCAAGAATCGCTCA+TGG + chr3_3:24570588-24570607 Msa0447160:CDS 50.0%
GCAAATGGACGAATGGCACC+AGG + chr3_3:24569263-24569282 Msa0447160:CDS 55.0%
CTCAATCGCGGAATCACCAC+CGG - chr3_3:24569321-24569340 None:intergenic 55.0%
AGGCAAGGTGCAAACGTCCA+AGG + chr3_3:24570757-24570776 Msa0447160:intron 55.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 24567608 24570975 24567608 ID=Msa0447160;Name=Msa0447160
chr3_3 mRNA 24567608 24570975 24567608 ID=Msa0447160-mRNA-1;Parent=Msa0447160;Name=Msa0447160-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|0.83|0.76|13|0|500
chr3_3 exon 24567608 24567778 24567608 ID=Msa0447160-mRNA-1:exon:4884;Parent=Msa0447160-mRNA-1
chr3_3 exon 24568020 24568089 24568020 ID=Msa0447160-mRNA-1:exon:4885;Parent=Msa0447160-mRNA-1
chr3_3 exon 24568207 24568265 24568207 ID=Msa0447160-mRNA-1:exon:4886;Parent=Msa0447160-mRNA-1
chr3_3 exon 24568510 24568585 24568510 ID=Msa0447160-mRNA-1:exon:4887;Parent=Msa0447160-mRNA-1
chr3_3 exon 24568684 24568761 24568684 ID=Msa0447160-mRNA-1:exon:4888;Parent=Msa0447160-mRNA-1
chr3_3 exon 24568854 24568897 24568854 ID=Msa0447160-mRNA-1:exon:4889;Parent=Msa0447160-mRNA-1
chr3_3 exon 24569194 24569412 24569194 ID=Msa0447160-mRNA-1:exon:4890;Parent=Msa0447160-mRNA-1
chr3_3 exon 24569577 24569683 24569577 ID=Msa0447160-mRNA-1:exon:4891;Parent=Msa0447160-mRNA-1
chr3_3 exon 24569888 24570105 24569888 ID=Msa0447160-mRNA-1:exon:4892;Parent=Msa0447160-mRNA-1
chr3_3 exon 24570211 24570242 24570211 ID=Msa0447160-mRNA-1:exon:4893;Parent=Msa0447160-mRNA-1
chr3_3 exon 24570331 24570433 24570331 ID=Msa0447160-mRNA-1:exon:4894;Parent=Msa0447160-mRNA-1
chr3_3 exon 24570560 24570668 24570560 ID=Msa0447160-mRNA-1:exon:4895;Parent=Msa0447160-mRNA-1
chr3_3 exon 24570759 24570975 24570759 ID=Msa0447160-mRNA-1:exon:4896;Parent=Msa0447160-mRNA-1
chr3_3 CDS 24567608 24567778 24567608 ID=Msa0447160-mRNA-1:cds;Parent=Msa0447160-mRNA-1
chr3_3 CDS 24568020 24568089 24568020 ID=Msa0447160-mRNA-1:cds;Parent=Msa0447160-mRNA-1
chr3_3 CDS 24568207 24568265 24568207 ID=Msa0447160-mRNA-1:cds;Parent=Msa0447160-mRNA-1
chr3_3 CDS 24568510 24568585 24568510 ID=Msa0447160-mRNA-1:cds;Parent=Msa0447160-mRNA-1
chr3_3 CDS 24568684 24568761 24568684 ID=Msa0447160-mRNA-1:cds;Parent=Msa0447160-mRNA-1
chr3_3 CDS 24568854 24568897 24568854 ID=Msa0447160-mRNA-1:cds;Parent=Msa0447160-mRNA-1
chr3_3 CDS 24569194 24569412 24569194 ID=Msa0447160-mRNA-1:cds;Parent=Msa0447160-mRNA-1
chr3_3 CDS 24569577 24569683 24569577 ID=Msa0447160-mRNA-1:cds;Parent=Msa0447160-mRNA-1
chr3_3 CDS 24569888 24570105 24569888 ID=Msa0447160-mRNA-1:cds;Parent=Msa0447160-mRNA-1
chr3_3 CDS 24570211 24570242 24570211 ID=Msa0447160-mRNA-1:cds;Parent=Msa0447160-mRNA-1
chr3_3 CDS 24570331 24570433 24570331 ID=Msa0447160-mRNA-1:cds;Parent=Msa0447160-mRNA-1
chr3_3 CDS 24570560 24570668 24570560 ID=Msa0447160-mRNA-1:cds;Parent=Msa0447160-mRNA-1
chr3_3 CDS 24570759 24570975 24570759 ID=Msa0447160-mRNA-1:cds;Parent=Msa0447160-mRNA-1
Gene Sequence

>Msa0447160

ATGACATTCAATTACCTTCTCTGCCTAATTGCTTTTGCACTTGTGCTTAGCAAAACAAATGTCAATTGCATTGAAACTATTGAAGTTGATCCACTTCTTGATGTTGCTTCATTGAGTAGAAACAGTTTCCCCAAAGGATTTATATTTGGAGCAGGATCTTCCTCATACCAGTTTGAAGGTGCAGCAAATGAAGGTGGTAGAACACCAAGTATATGGGATACTTTCACCCATAAATATCCAGAAAAGATCAAAGATAGAAGCAATGCAGATGTAGCCATTGATTCCTATCACAACTACAAGGAAGATGTTAGAATCATCAAGGATATGAACTTGGATTCATACAGATTCTCCTTATCCTGGTCTAGAATATTGCCAAAAGGAAAGCTTAGTGGTGGCATAAATCAAGAAGGAATCAACTATTACAATAATTTCATCAACGAGTTATTGGCTAATGGTATAAAACCATTGGTGACACTTTTTCATTGGGATCTCCCACAAGAATTTGGTGATAGAGTGAAATATTGGGTTACTTTGAATGAACCATGGAGTTACAGTCAAAATGGCTATGCAAATGGACGAATGGCACCAGGTCGTTGTTCTAGTTGGTTGAATCCAAATTGCACCGGTGGTGATTCCGCGATTGAGCCCTATATTGTCACGCACTACCAACTTTTAGCTCATGCCGAAGCCGTCAATGTGTACAAGACAAAGTATCAGGAAACTCAAAAGGGTGTAATAGGTATAACCTTGGTAGCTAACTGGTACTTGCCACTCTCAGATTCCAAATCTGATCAAAAAGCTGCTGAAAGAGCTGTTGATTTCATGTTTATGGATCCACTGACAACAGGAGATTATCCAAAAAGCATGAGATCCCTTGTTGGAGCAAGATTACCAAAATTCAATGCAAAACAATCTAAGCTACTCATTGGTTCATTTGATTTTATTGGTTTGAACTATTATTCTTCAACTTATGCCTCAGATGCACCATTTCTAAGCAATGCTAGACCTAGCTACTTGACAGATTCTTTGGTTAATCCAGCATTTGAGCGAAATGGGAAACCTATTGGTATTAAGATTGCTTCTGATTGGTTGTATGTTTATCCGAGAGGAATTCGTGATCTTCTGTTATACACCAAGGAAAAGTACAATAACCCGTTGATTTACATCACTGAAAATGGTATTAACGAGTACAGTGATCCTACACTATCGGTCCAAGAATCGCTCATGGACACTTTTCGAATTGATTACCATTATCGTCATCTATATTATCTTCGATCTGCAATTGAGCAAGGTGCAAACGTCCAAGGATATTACATATGGTCCTTGTTCGACAATTTTGAATGGTGCTCGGGTTATTCCGTGAGATTTGGAATGACATTTGTGGATTACAAGAATGGTTTGAAAAGATACGAGAAACTTTCTGCATTGTGGTTCAAGAATTTTCTCAGAAAAGAAACTAAACTTATGTTTCTTGTGAGAAAAGTTATTAGTTTTATTCATTAA

Protein sequence

>Msa0447160

MTFNYLLCLIAFALVLSKTNVNCIETIEVDPLLDVASLSRNSFPKGFIFGAGSSSYQFEGAANEGGRTPSIWDTFTHKYPEKIKDRSNADVAIDSYHNYKEDVRIIKDMNLDSYRFSLSWSRILPKGKLSGGINQEGINYYNNFINELLANGIKPLVTLFHWDLPQEFGDRVKYWVTLNEPWSYSQNGYANGRMAPGRCSSWLNPNCTGGDSAIEPYIVTHYQLLAHAEAVNVYKTKYQETQKGVIGITLVANWYLPLSDSKSDQKAAERAVDFMFMDPLTTGDYPKSMRSLVGARLPKFNAKQSKLLIGSFDFIGLNYYSSTYASDAPFLSNARPSYLTDSLVNPAFERNGKPIGIKIASDWLYVYPRGIRDLLLYTKEKYNNPLIYITENGINEYSDPTLSVQESLMDTFRIDYHYRHLYYLRSAIEQGANVQGYYIWSLFDNFEWCSGYSVRFGMTFVDYKNGLKRYEKLSALWFKNFLRKETKLMFLVRKVISFIH*