AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0551950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0551950 MtrunA17_Chr4g0037201 98.107 317 6 0 1 317 196 512 0.0 636
Msa0551950 MtrunA17_Chr8g0384661 68.454 317 91 2 1 317 187 494 6.59e-163 463
Msa0551950 MtrunA17_Chr3g0125081 64.353 317 105 1 1 317 171 479 1.29e-154 441
Msa0551950 MtrunA17_Chr3g0125091 63.522 318 107 2 1 317 171 480 5.62e-152 435
Msa0551950 MtrunA17_Chr1g0159761 64.465 318 106 2 1 317 164 475 1.10e-148 426
Msa0551950 MtrunA17_Chr3g0125101 62.893 318 109 2 1 317 171 480 5.12e-148 424
Msa0551950 MtrunA17_Chr3g0130651 65.815 313 96 3 1 313 163 464 7.85e-139 400
Msa0551950 MtrunA17_Chr3g0130641 59.621 317 119 2 1 317 170 477 1.48e-136 395
Msa0551950 MtrunA17_Chr3g0140761 56.508 315 131 2 1 314 170 479 7.77e-131 381
Msa0551950 MtrunA17_Chr1g0146491 55.556 315 134 2 1 314 160 469 6.60e-128 373
Msa0551950 MtrunA17_Chr1g0206851 53.651 315 134 3 1 314 75 378 7.04e-127 367
Msa0551950 MtrunA17_Chr1g0206871 49.846 325 148 3 1 316 152 470 1.47e-124 365
Msa0551950 MtrunA17_Chr1g0206831 51.290 310 139 3 1 309 38 336 2.76e-121 352
Msa0551950 MtrunA17_Chr3g0103221 50.654 306 143 1 1 306 167 464 1.96e-118 349
Msa0551950 MtrunA17_Chr3g0103211 49.020 306 148 1 1 306 160 457 3.66e-116 343
Msa0551950 MtrunA17_Chr3g0103231 48.693 306 149 1 1 306 160 457 2.69e-115 341
Msa0551950 MtrunA17_Chr5g0447221 48.693 306 149 1 1 306 166 463 1.31e-114 339
Msa0551950 MtrunA17_Chr3g0103251 45.672 335 145 2 1 306 44 370 2.76e-112 330
Msa0551950 MtrunA17_Chr3g0103271 51.645 304 139 1 1 304 165 460 5.12e-110 327
Msa0551950 MtrunA17_Chr3g0140531 46.326 313 162 2 1 313 161 467 3.25e-100 302
Msa0551950 MtrunA17_Chr5g0447231 46.405 306 156 1 1 306 163 460 9.96e-100 301
Msa0551950 MtrunA17_Chr1g0146411 46.497 314 156 3 1 314 169 470 8.25e-95 288
Msa0551950 MtrunA17_Chr1g0206821 57.014 221 95 0 96 316 310 530 2.01e-94 289
Msa0551950 MtrunA17_Chr1g0206821 49.505 101 45 2 1 100 159 254 8.17e-23 98.6
Msa0551950 MtrunA17_Chr1g0146331 42.675 314 171 4 1 313 157 462 1.00e-90 278
Msa0551950 MtrunA17_Chr2g0293331 43.949 314 166 4 1 313 149 453 3.97e-90 276
Msa0551950 MtrunA17_Chr1g0146391 40.764 314 178 3 1 314 149 454 1.47e-87 270
Msa0551950 MtrunA17_Chr3g0140541 44.884 303 159 2 11 313 172 466 5.78e-86 266
Msa0551950 MtrunA17_Chr3g0130661 59.563 183 71 1 134 316 1 180 2.14e-79 239
Msa0551950 MtrunA17_Chr5g0402151 58.084 167 36 3 1 167 132 264 3.79e-55 181
Msa0551950 MtrunA17_Chr6g0458931 30.915 317 178 11 1 311 171 452 3.90e-37 137
Msa0551950 MtrunA17_Chr4g0057851 30.284 317 180 9 1 311 139 420 2.80e-33 127
Msa0551950 MtrunA17_Chr8g0376991 28.797 316 192 7 1 314 152 436 2.92e-33 127
Msa0551950 MtrunA17_Chr6g0458921 32.808 317 173 10 1 311 143 425 6.04e-31 120
Msa0551950 MtrunA17_Chr6g0459031 32.808 317 173 10 1 311 143 425 8.25e-31 120
Msa0551950 MtrunA17_Chr2g0331721 29.487 312 187 7 1 310 177 457 3.23e-30 119
Msa0551950 MtrunA17_Chr1g0184721 28.527 319 194 9 1 314 149 438 4.19e-29 115
Msa0551950 MtrunA17_Chr6g0459011 30.128 312 183 6 1 309 114 393 5.37e-29 114
Msa0551950 MtrunA17_Chr3g0077651 29.618 314 181 6 4 311 187 466 4.30e-26 107
Msa0551950 MtrunA17_Chr2g0328081 29.907 321 177 10 1 311 143 425 6.09e-26 106
Msa0551950 MtrunA17_Chr6g0459021 28.797 316 186 8 1 311 163 444 9.25e-26 106
Msa0551950 MtrunA17_Chr5g0422741 29.653 317 182 11 1 311 155 436 2.18e-25 105
Msa0551950 MtrunA17_Chr6g0459001 31.176 340 188 12 1 311 151 473 2.45e-25 105
Msa0551950 MtrunA17_Chr3g0143701 25.641 312 193 10 2 304 218 499 8.71e-24 101
Msa0551950 MtrunA17_Chr7g0230011 28.750 320 181 9 1 311 159 440 1.76e-23 100
Msa0551950 MtrunA17_Chr3g0122921 28.221 326 161 12 1 313 162 427 3.52e-23 99.0
Msa0551950 MtrunA17_Chr3g0130671 61.842 76 29 0 1 76 176 251 1.64e-22 95.1
Msa0551950 MtrunA17_Chr1g0198541 27.331 311 177 9 11 311 163 434 3.44e-22 96.3
Msa0551950 MtrunA17_Chr1g0198531 26.452 310 181 8 11 311 163 434 4.96e-21 92.8
Msa0551950 MtrunA17_Chr5g0406351 26.829 287 169 12 2 278 241 496 3.35e-18 85.1
Msa0551950 MtrunA17_Chr1g0159751 48.780 82 35 1 113 194 1 75 5.48e-18 77.4
Msa0551950 MtrunA17_Chr4g0027241 26.543 324 193 12 1 313 170 459 2.48e-17 82.4
Msa0551950 MtrunA17_Chr1g0198081 26.829 328 193 12 1 316 189 481 1.59e-16 80.1
Msa0551950 MtrunA17_Chr4g0038711 23.839 323 206 11 2 312 207 501 5.43e-16 78.6
Msa0551950 MtrunA17_Chr8g0387941 24.843 318 197 11 9 316 165 450 1.25e-15 77.0
Msa0551950 MtrunA17_Chr5g0436281 25.498 251 151 7 71 313 158 380 1.05e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0551950 AT5G09220.1 67.296 318 97 2 1 317 182 493 1.55e-162 462
Msa0551950 AT5G63850.1 67.610 318 96 2 1 317 155 466 5.22e-159 452
Msa0551950 AT1G77380.1 68.139 317 95 1 1 317 166 476 3.81e-154 440
Msa0551950 AT1G44100.1 63.722 317 115 0 1 317 164 480 4.35e-154 440
Msa0551950 AT1G58360.1 52.997 317 144 1 1 317 173 484 5.76e-128 374
Msa0551950 AT1G10010.1 53.968 315 140 1 1 315 164 473 8.42e-128 373
Msa0551950 AT1G10010.2 53.968 315 140 1 1 315 165 474 9.08e-128 373
Msa0551950 AT5G49630.1 55.229 306 130 3 11 314 179 479 1.19e-125 368
Msa0551950 AT5G23810.1 50.327 306 142 2 1 304 165 462 6.13e-98 297
Msa0551950 AT5G23810.2 54.396 182 75 1 1 182 165 338 5.27e-60 196
Msa0551950 AT1G24400.1 29.283 321 184 5 1 314 157 441 1.18e-31 123
Msa0551950 AT5G40780.3 28.344 314 190 8 1 311 114 395 3.24e-30 118
Msa0551950 AT5G40780.2 28.344 314 190 8 1 311 114 395 3.24e-30 118
Msa0551950 AT5G40780.1 27.586 319 186 7 1 311 162 443 9.72e-30 117
Msa0551950 AT1G48640.1 27.445 317 195 7 1 314 169 453 5.95e-29 115
Msa0551950 AT3G01760.1 29.032 310 187 6 1 308 163 441 2.41e-27 111
Msa0551950 AT1G61270.1 27.987 318 180 8 1 308 164 442 6.56e-27 110
Msa0551950 AT1G71680.1 28.165 316 195 6 1 314 163 448 9.78e-26 106
Msa0551950 AT1G67640.1 29.022 317 188 7 1 313 157 440 1.26e-25 106
Msa0551950 AT1G25530.1 29.936 314 185 7 1 311 156 437 1.31e-23 100
Msa0551950 AT5G23810.4 49.000 100 43 1 1 100 165 256 5.50e-23 96.3
Msa0551950 AT1G71680.2 31.414 191 116 3 1 189 163 340 2.73e-20 90.5
Msa0551950 AT1G08230.4 30.800 250 140 9 75 313 102 329 1.72e-18 85.1
Msa0551950 AT1G08230.6 30.800 250 140 9 75 313 102 329 1.72e-18 85.1
Msa0551950 AT1G08230.5 30.800 250 140 9 75 313 102 329 1.72e-18 85.1
Msa0551950 AT1G08230.3 30.800 250 140 9 75 313 121 348 2.57e-18 84.7
Msa0551950 AT1G08230.2 30.800 250 140 9 75 313 221 448 9.78e-18 84.0
Msa0551950 AT5G41800.1 26.006 323 193 12 6 316 161 449 2.59e-14 73.6

Find 115 sgRNAs with CRISPR-Local

Find 918 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTATTGTTGTGCACTTAAT+TGG 0.118969 4_1:-48302753 Msa0551950:CDS
TTCAGTCTCAGTTTGGATTT+TGG 0.199225 4_1:+48313199 None:intergenic
CTGGAGTGCTTTCATTGGCT+TGG 0.244355 4_1:-48312939 Msa0551950:five_prime_UTR
TTGGATTCTATAACCCTTAT+TGG 0.244673 4_1:-48302797 Msa0551950:CDS
ATCCATTGCTGGAGTGGTTT+TGG 0.246912 4_1:-48301936 Msa0551950:CDS
TTGAATTTCAATGAGGATAA+TGG 0.255986 4_1:+48303061 None:intergenic
GTTGGAATACTTGGAGCTTT+TGG 0.258162 4_1:-48302097 Msa0551950:CDS
GGACATGATAGCTGCAACTA+TGG 0.263574 4_1:+48303353 None:intergenic
CTAGGAAGTGTTCTACTTCT+TGG 0.264874 4_1:+48313376 None:intergenic
GCTGTCACAAAATTATTCTT+TGG 0.273989 4_1:+48302247 None:intergenic
ATTGGGTAATAAACTGTTAA+AGG 0.276366 4_1:+48302067 None:intergenic
TGTGAAATATACATGTCTAT+TGG 0.291402 4_1:+48302049 None:intergenic
GTGAAATATACATGTCTATT+GGG 0.296365 4_1:+48302050 None:intergenic
TTGATCAAAGTCTGGGATTT+GGG 0.299517 4_1:+48303389 None:intergenic
AGAACAGATGACTCTGTTAA+TGG 0.303497 4_1:-48312820 Msa0551950:five_prime_UTR
CTATTGTTGTGCACTTAATT+GGG 0.309048 4_1:-48302752 Msa0551950:CDS
TCAATTTCTTCCGCTTAGTT+TGG 0.311289 4_1:-48302183 Msa0551950:CDS
GTTGTATTGCAGGAACATTT+TGG 0.320701 4_1:-48312999 Msa0551950:intron
CTTGATCAAAGTCTGGGATT+TGG 0.326018 4_1:+48303388 None:intergenic
TGTTTCTTAGGGCAATTAAA+AGG 0.327651 4_1:-48303506 Msa0551950:intron
TGGAGTGCTTTCATTGGCTT+GGG 0.340533 4_1:-48312938 Msa0551950:five_prime_UTR
GCAATGTCAAGAAGCCAATA+AGG 0.342161 4_1:+48302783 None:intergenic
TCACTGGCACGCAGAAAATA+TGG 0.342317 4_1:-48303130 Msa0551950:CDS
ACTTATTCTACAGTTGGATT+AGG 0.345920 4_1:-48303327 Msa0551950:CDS
TGAACACAAGACCATGAAAA+AGG 0.355176 4_1:-48302925 Msa0551950:CDS
GATGCAGTAAAGTCTATCTT+AGG 0.361901 4_1:-48312775 Msa0551950:intron
ATTCAGTATGTAAATCTGTT+TGG 0.368777 4_1:-48312636 Msa0551950:five_prime_UTR
CATATCATCACTGCTGTGAT+AGG 0.370033 4_1:-48312964 Msa0551950:five_prime_UTR
TATGCTTGAACCTGCAACTT+TGG 0.370453 4_1:+48303293 None:intergenic
GGCAATAGCTCAGCTTGGTT+GGG 0.371439 4_1:-48312917 Msa0551950:five_prime_UTR
TCCCAGACTTTGATCAAGTA+TGG 0.373754 4_1:-48303383 Msa0551950:CDS
GGGCAATAGCTCAGCTTGGT+TGG 0.375371 4_1:-48312918 Msa0551950:five_prime_UTR
TATATTTCACAAAAGAAGAT+TGG 0.376531 4_1:-48302037 Msa0551950:CDS
GCTGCTGTTGGATCCATTGC+TGG 0.376547 4_1:-48301947 Msa0551950:CDS
AATGATGTGGTTGGAATACT+TGG 0.378175 4_1:-48302106 Msa0551950:CDS
CACCATACTTGATCAAAGTC+TGG 0.378867 4_1:+48303381 None:intergenic
CTTGCACTTCAGATGCTTAG+TGG 0.381924 4_1:-48301995 Msa0551950:CDS
CTAGGCATCGCCAAAGTTGC+AGG 0.384071 4_1:-48303303 Msa0551950:intron
AGGCTCTGGAGTGCTTTCAT+TGG 0.387217 4_1:-48312944 Msa0551950:five_prime_UTR
GTCGAAGCACTTGGAATAGT+TGG 0.391776 4_1:+48313160 None:intergenic
CTGCGTGCCAGTGACTGTTC+CGG 0.400866 4_1:+48303139 None:intergenic
AGACTGATTCAGTCTCAGTT+TGG 0.403667 4_1:+48313192 None:intergenic
AAACCAGTCAAAAGATTTCC+AGG 0.403962 4_1:+48302819 None:intergenic
GCTCAGCTTGGTTGGGCTGT+TGG 0.410253 4_1:-48312910 Msa0551950:five_prime_UTR
AATCTGTTTGGAATTGCAAT+TGG 0.410741 4_1:-48312624 Msa0551950:five_prime_UTR
GGCATGGGTTATGCAGCCTT+TGG 0.414032 4_1:-48302852 Msa0551950:CDS
TCTACAGTTGGATTAGGTCT+AGG 0.432849 4_1:-48303321 Msa0551950:CDS
CTTGGAATAGTTGGGCTCAA+TGG 0.435400 4_1:+48313169 None:intergenic
AAAATTTCAAGGAAGCTTGA+TGG 0.436014 4_1:-48303189 Msa0551950:CDS
TCTATCCATTGCTTGACATA+TGG 0.442564 4_1:+48303445 None:intergenic
ATTTCTTCCGCTTAGTTTGG+AGG 0.446852 4_1:-48302180 Msa0551950:CDS
ATTTCAATATTAGCTGCTGT+TGG 0.447054 4_1:-48301959 Msa0551950:CDS
ATCACTGCTGTGATAGGCTC+TGG 0.451320 4_1:-48312958 Msa0551950:five_prime_UTR
TCCTTCACTTATTCTACAGT+TGG 0.454992 4_1:-48303333 Msa0551950:CDS
ACAGAAAATGGAAAATTTCA+AGG 0.455737 4_1:-48303200 Msa0551950:intron
TTCATGGTCTTGTGTTCAGA+AGG 0.465842 4_1:+48302930 None:intergenic
TATTTACTATGTGGTGGCAT+GGG 0.466716 4_1:-48302867 Msa0551950:CDS
CTATTTACTATGTGGTGGCA+TGG 0.467141 4_1:-48302868 Msa0551950:CDS
GACGGTCGCCTCAAGAGAAC+AGG 0.477944 4_1:-48313134 Msa0551950:intron
GTGCACAACAATAGCAAAGT+TGG 0.478588 4_1:+48302761 None:intergenic
GCCTTTGGAGATCATGTACC+TGG 0.484040 4_1:-48302837 Msa0551950:CDS
GCACTTAATTGGGGCATACC+AGG 0.487629 4_1:-48302742 Msa0551950:intron
AAATTTCAAGGAAGCTTGAT+GGG 0.493759 4_1:-48303188 Msa0551950:CDS
TCGAAGCACTTGGAATAGTT+GGG 0.495734 4_1:+48313161 None:intergenic
GCAAAGAGAATCATGACAAC+AGG 0.499921 4_1:+48312886 None:intergenic
TGTTGGATCCATTGCTGGAG+TGG 0.501226 4_1:-48301942 Msa0551950:CDS
CAATGTCAAGAAGCCAATAA+GGG 0.505504 4_1:+48302784 None:intergenic
GACTAATTTCTATGTCTAAG+AGG 0.507831 4_1:-48301703 Msa0551950:three_prime_UTR
TACACACCAATGCAAGGAAT+AGG 0.509204 4_1:+48302211 None:intergenic
GCTTGGGCAATAGCTCAGCT+TGG 0.509406 4_1:-48312922 Msa0551950:five_prime_UTR
ACACAAGCCGGAACAGTCAC+TGG 0.511407 4_1:-48303146 Msa0551950:CDS
CACAAAAGAAGATTGGAAGA+TGG 0.516110 4_1:-48302030 Msa0551950:CDS
TGGAGGAATTTACAAGCTCT+AGG 0.517506 4_1:-48303110 Msa0551950:CDS
GGAGGAATTTACAAGCTCTA+GGG 0.522665 4_1:-48303109 Msa0551950:CDS
GAAATACCTATTCCTTGCAT+TGG 0.524129 4_1:-48302217 Msa0551950:CDS
ACCGTCGTCGTCGAAGCACT+TGG 0.529696 4_1:+48313151 None:intergenic
GAGGATAATGGAGAAGGAGT+AGG 0.536878 4_1:+48303073 None:intergenic
ATCCAAAACCACTCCAGCAA+TGG 0.538718 4_1:+48301934 None:intergenic
AGCTTGATGGGAATTAGCAT+TGG 0.538971 4_1:-48303176 Msa0551950:CDS
AGAAGTGGAGTGCACGTAAG+TGG 0.542626 4_1:-48302270 Msa0551950:CDS
ATTGGTGCGGTGACACAAGC+CGG 0.545386 4_1:-48303158 Msa0551950:CDS
TTTCAGACACTACTTAGAAG+TGG 0.545928 4_1:-48313231 Msa0551950:five_prime_UTR
TTTACAAGCTCTAGGGGCAA+TGG 0.553469 4_1:-48303102 Msa0551950:CDS
TTCAATGAGGATAATGGAGA+AGG 0.555176 4_1:+48303067 None:intergenic
GTGTTTGCTAAAAGTGAATG+TGG 0.556188 4_1:+48313446 None:intergenic
ACAGTGTTCTATTTACTATG+TGG 0.563522 4_1:-48302876 Msa0551950:CDS
ATGGTCTTGTGTTCAGAAGG+AGG 0.564496 4_1:+48302933 None:intergenic
TAGTCCTTGTAACTTAGAAG+TGG 0.564749 4_1:+48301721 None:intergenic
ATGTTGAACCTGTTCTCTTG+AGG 0.568328 4_1:+48313126 None:intergenic
ACCATACTTGATCAAAGTCT+GGG 0.568824 4_1:+48303382 None:intergenic
CCATGCCATATGTCAAGCAA+TGG 0.571445 4_1:-48303450 Msa0551950:five_prime_UTR
AATTGTTATCATGAGAGTCA+TGG 0.575521 4_1:-48303480 Msa0551950:five_prime_UTR
TATTGTTGTGCACTTAATTG+GGG 0.575737 4_1:-48302751 Msa0551950:CDS
ACTCCATGTTGAAATCTGCT+AGG 0.577936 4_1:+48313358 None:intergenic
CCATTGCTTGACATATGGCA+TGG 0.579811 4_1:+48303450 None:intergenic
TGATTACTTGAATTTCAATG+AGG 0.586622 4_1:+48303054 None:intergenic
TGTGCCACTTCTAAGTTACA+AGG 0.591432 4_1:-48301725 Msa0551950:three_prime_UTR
GTGTTCTATTTACTATGTGG+TGG 0.593769 4_1:-48302873 Msa0551950:CDS
AACTATGATGCTCACCAAAG+TGG 0.602438 4_1:+48302902 None:intergenic
CAGCTAATATTGAAATGATG+AGG 0.607869 4_1:+48301966 None:intergenic
TCCAACTGTAGAATAAGTGA+AGG 0.609438 4_1:+48303332 None:intergenic
TCCAGGTACATGATCTCCAA+AGG 0.613687 4_1:+48302836 None:intergenic
CTAAGCGGAAGAAATTGAGT+TGG 0.620154 4_1:+48302188 None:intergenic
AGTTGGTACACACCAATGCA+AGG 0.634290 4_1:+48302205 None:intergenic
GAGGAATTTACAAGCTCTAG+GGG 0.636105 4_1:-48303108 Msa0551950:CDS
TCCAAGTGCTTCGACGACGA+CGG 0.637344 4_1:-48313152 Msa0551950:five_prime_UTR
CTTCCTAGCAGATTTCAACA+TGG 0.642728 4_1:-48313361 Msa0551950:five_prime_UTR
AACTCACATCATACTAACTG+AGG 0.651693 4_1:+48312587 None:intergenic
GTACAAGTGAGTGTGATGAA+TGG 0.658315 4_1:+48313424 None:intergenic
TTCTATAACAGACAGAAGAG+AGG 0.662581 4_1:-48313259 Msa0551950:intron
CAGACTTTGATCAAGTATGG+TGG 0.668858 4_1:-48303380 Msa0551950:CDS
AGAGTGTCCTCCAAACTAAG+CGG 0.685896 4_1:+48302173 None:intergenic
GATGGGAATTAGCATTGGTG+CGG 0.687311 4_1:-48303171 Msa0551950:CDS
CTGGCACGCAGAAAATATGG+AGG 0.712561 4_1:-48303127 Msa0551950:CDS
AGAAGTGTAAAGATTGACGA+CGG 0.732171 4_1:+48312864 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGAAAATTAATCATTTAA+GGG - chr4_1:48311504-48311523 Msa0551950:intron 10.0%
!!! TTAAGTTGATTATATAAAAA+CGG + chr4_1:48312449-48312468 None:intergenic 10.0%
!! AATGTTTAGTTGAAAAAAAT+TGG - chr4_1:48302045-48302064 Msa0551950:CDS 15.0%
!!! ATTTTTATTTTTTTATCTGC+AGG + chr4_1:48302117-48302136 None:intergenic 15.0%
!! AAAGATTTGATTAAGAAAAT+AGG - chr4_1:48302869-48302888 Msa0551950:CDS 15.0%
!! TTTATTAGAACAATTCAATT+AGG - chr4_1:48303136-48303155 Msa0551950:CDS 15.0%
!! AATTAAAACATACATAAACT+GGG - chr4_1:48303398-48303417 Msa0551950:CDS 15.0%
!!! AGAGAATATTTTTAACATTT+AGG - chr4_1:48304220-48304239 Msa0551950:intron 15.0%
!!! GAGAATATTTTTAACATTTA+GGG - chr4_1:48304221-48304240 Msa0551950:intron 15.0%
!! AGAAATTGAATGATAAAAAA+TGG + chr4_1:48304287-48304306 None:intergenic 15.0%
!! AGTAAATTGAAAAACAAATT+TGG - chr4_1:48304731-48304750 Msa0551950:intron 15.0%
!!! TTTCAAGAAAACAATTTTTT+TGG + chr4_1:48306889-48306908 None:intergenic 15.0%
!!! TTTTCTTTTCTTTTAATACA+AGG + chr4_1:48307033-48307052 None:intergenic 15.0%
!! AAAGATTTGATTAAGAAAAT+AGG - chr4_1:48302869-48302888 Msa0551950:CDS 15.0%
!! TTTATTAGAACAATTCAATT+AGG - chr4_1:48303136-48303155 Msa0551950:CDS 15.0%
!! AATTAAAACATACATAAACT+GGG - chr4_1:48303398-48303417 Msa0551950:CDS 15.0%
!! GTATGAAAATTAATCATTTA+AGG - chr4_1:48311503-48311522 Msa0551950:intron 15.0%
!! TTGCATAAAAAAGTTAATAA+TGG + chr4_1:48311904-48311923 None:intergenic 15.0%
!! ATAATATACACATTTCTTTA+TGG - chr4_1:48312134-48312153 Msa0551950:intron 15.0%
!!! AAAAAATGATAAGTTTGTTT+TGG - chr4_1:48313308-48313327 Msa0551950:intron 15.0%
!! AGAGAATCATTAGTAATAAT+AGG + chr4_1:48302951-48302970 None:intergenic 20.0%
!! TTGAATTGTTCTAATAAACA+TGG + chr4_1:48303134-48303153 None:intergenic 20.0%
!! AATCATGTTTATATTTGATC+AGG - chr4_1:48303201-48303220 Msa0551950:intron 20.0%
!! GAATTAAAACATACATAAAC+TGG - chr4_1:48303397-48303416 Msa0551950:CDS 20.0%
!! ATGAAAAATACACACAAAAA+TGG + chr4_1:48304333-48304352 None:intergenic 20.0%
!! TTAACTCAGAAATTCATTAA+GGG - chr4_1:48304466-48304485 Msa0551950:intron 20.0%
!! TACATTCAACAAATTAAAAC+AGG - chr4_1:48304579-48304598 Msa0551950:intron 20.0%
!! ACATTCAACAAATTAAAACA+GGG - chr4_1:48304580-48304599 Msa0551950:intron 20.0%
!!! ATTGTTTCTCTATTATTGAT+TGG + chr4_1:48304666-48304685 None:intergenic 20.0%
!!! CAAAAATTTTCAGAACTTAA+AGG + chr4_1:48306925-48306944 None:intergenic 20.0%
!!! TTAAGTTCTGAAAATTTTTG+AGG - chr4_1:48306925-48306944 Msa0551950:intron 20.0%
!! ATACCTGAAAATTAAATAGT+GGG - chr4_1:48307090-48307109 Msa0551950:intron 20.0%
!! AGAGAATCATTAGTAATAAT+AGG + chr4_1:48302951-48302970 None:intergenic 20.0%
!! TTGAATTGTTCTAATAAACA+TGG + chr4_1:48303134-48303153 None:intergenic 20.0%
!! AATCATGTTTATATTTGATC+AGG - chr4_1:48303201-48303220 Msa0551950:intron 20.0%
!! GAATTAAAACATACATAAAC+TGG - chr4_1:48303397-48303416 Msa0551950:CDS 20.0%
!! CAAAAACAAATCATCAATAT+AGG + chr4_1:48311611-48311630 None:intergenic 20.0%
!!! TTTTTTTATAAGCAAGTACT+TGG - chr4_1:48312515-48312534 Msa0551950:intron 20.0%
!! ATTAAAAAATGGTAATAGCA+TGG + chr4_1:48313025-48313044 None:intergenic 20.0%
!!! ATTACCATTTTTTAATGATG+TGG - chr4_1:48313029-48313048 Msa0551950:intron 20.0%
!! TATATTTCACAAAAGAAGAT+TGG - chr4_1:48313111-48313130 Msa0551950:intron 20.0%
!!! ACTTAATAACTAGTTTTGAA+TGG + chr4_1:48313255-48313274 None:intergenic 20.0%
!! AAGTGAATGTGGATTTTTAT+AGG + chr4_1:48301694-48301713 None:intergenic 25.0%
! AGCATATGACATTAGAATAT+TGG + chr4_1:48301836-48301855 None:intergenic 25.0%
!!! CACTTCAAACTTTAAAATTG+AGG - chr4_1:48302077-48302096 Msa0551950:CDS 25.0%
!! TTTGATCATGTCATTGTTTT+TGG - chr4_1:48302453-48302472 Msa0551950:intron 25.0%
!!! TTGATCATGTCATTGTTTTT+GGG - chr4_1:48302454-48302473 Msa0551950:intron 25.0%
! ATTCAGTATGTAAATCTGTT+TGG - chr4_1:48302512-48302531 Msa0551950:intron 25.0%
!! TATCAATCAGAATTTTCTTG+AGG + chr4_1:48302668-48302687 None:intergenic 25.0%
! TTTACTACTTCGATAGTTAT+TGG + chr4_1:48302714-48302733 None:intergenic 25.0%
! TTCAATTGCGTTATAAAAGT+CGG - chr4_1:48302772-48302791 Msa0551950:CDS 25.0%
!! AATCGTTTGTTAGTGATATT+AGG + chr4_1:48303094-48303113 None:intergenic 25.0%
! TCTGTCATTACGTAATATTA+GGG + chr4_1:48303752-48303771 None:intergenic 25.0%
! TTCTGTCATTACGTAATATT+AGG + chr4_1:48303753-48303772 None:intergenic 25.0%
!! AATATCATTACACACTTTTG+AGG - chr4_1:48304041-48304060 Msa0551950:intron 25.0%
!!! TTTTGTGCTTTAATTTTCGT+AGG + chr4_1:48304148-48304167 None:intergenic 25.0%
! TGTTGCTAAAGATTAAGTTT+GGG + chr4_1:48304434-48304453 None:intergenic 25.0%
! ATGTTGCTAAAGATTAAGTT+TGG + chr4_1:48304435-48304454 None:intergenic 25.0%
! CTTAATGAATTTCTGAGTTA+AGG + chr4_1:48304467-48304486 None:intergenic 25.0%
! CTTAACTCAGAAATTCATTA+AGG - chr4_1:48304465-48304484 Msa0551950:intron 25.0%
!! TAGGATTAGAACTTTTTGTT+CGG + chr4_1:48304533-48304552 None:intergenic 25.0%
! GATTTGTGAAGAAATATGAA+GGG + chr4_1:48305486-48305505 None:intergenic 25.0%
!! AAAATGATGATGAACAGTTA+AGG - chr4_1:48306559-48306578 Msa0551950:intron 25.0%
! CATACCTGAAAATTAAATAG+TGG - chr4_1:48307089-48307108 Msa0551950:intron 25.0%
!! ATACTTTAGAAAGAATTAGG+AGG + chr4_1:48307334-48307353 None:intergenic 25.0%
!! CTGATACTTTAGAAAGAATT+AGG + chr4_1:48307337-48307356 None:intergenic 25.0%
! TTCATGAACTTAGCATATAA+CGG - chr4_1:48308223-48308242 Msa0551950:intron 25.0%
!!! AAGAGTCAAATTTTGAAAGA+TGG + chr4_1:48308403-48308422 None:intergenic 25.0%
! GAAAGGAAGAAAAAAATAGA+GGG + chr4_1:48308475-48308494 None:intergenic 25.0%
! GTTGAAAAAGAAAATGATCA+TGG + chr4_1:48308511-48308530 None:intergenic 25.0%
! TTATTTGAGTAGCTTAGATT+TGG - chr4_1:48308922-48308941 Msa0551950:intron 25.0%
! AATTCAATCCAGAAATTGAA+AGG + chr4_1:48310016-48310035 None:intergenic 25.0%
! GGCAATTACGTTATAATTTA+GGG + chr4_1:48310174-48310193 None:intergenic 25.0%
! AGGCAATTACGTTATAATTT+AGG + chr4_1:48310175-48310194 None:intergenic 25.0%
! ACTGTTGAATTATTTCAACA+AGG + chr4_1:48310195-48310214 None:intergenic 25.0%
! TTTACTACTTCGATAGTTAT+TGG + chr4_1:48302714-48302733 None:intergenic 25.0%
! TTCAATTGCGTTATAAAAGT+CGG - chr4_1:48302772-48302791 Msa0551950:CDS 25.0%
!! AATCGTTTGTTAGTGATATT+AGG + chr4_1:48303094-48303113 None:intergenic 25.0%
! TCTGTCATTACGTAATATTA+GGG + chr4_1:48303752-48303771 None:intergenic 25.0%
! TTCTGTCATTACGTAATATT+AGG + chr4_1:48303753-48303772 None:intergenic 25.0%
!! CATAGATCAAATTTTCGATA+TGG + chr4_1:48311475-48311494 None:intergenic 25.0%
! CATATCGAAAATTTGATCTA+TGG - chr4_1:48311473-48311492 Msa0551950:intron 25.0%
!! ACTTTTCATCATACAGAAAA+TGG - chr4_1:48311936-48311955 Msa0551950:intron 25.0%
! ACAGAAAATGGAAAATTTCA+AGG - chr4_1:48311948-48311967 Msa0551950:intron 25.0%
! TTGAATTTCAATGAGGATAA+TGG + chr4_1:48312090-48312109 None:intergenic 25.0%
! TGATTACTTGAATTTCAATG+AGG + chr4_1:48312097-48312116 None:intergenic 25.0%
! ATTCTATATTGTACTGTGTT+AGG - chr4_1:48312825-48312844 Msa0551950:five_prime_UTR 25.0%
! TTCTCAACAAATGCAAAAAA+GGG + chr4_1:48312862-48312881 None:intergenic 25.0%
! ATTGGGTAATAAACTGTTAA+AGG + chr4_1:48313084-48313103 None:intergenic 25.0%
! GTGAAATATACATGTCTATT+GGG + chr4_1:48313101-48313120 None:intergenic 25.0%
! TGTGAAATATACATGTCTAT+TGG + chr4_1:48313102-48313121 None:intergenic 25.0%
GGAAAAAAGTTCAAAATGTG+TGG - chr4_1:48302485-48302504 Msa0551950:intron 30.0%
! AATCTGTTTGGAATTGCAAT+TGG - chr4_1:48302524-48302543 Msa0551950:intron 30.0%
!!! GTTTATTTTGTTTTGCCACT+AGG - chr4_1:48302805-48302824 Msa0551950:CDS 30.0%
!! CTAATAAACATGGTTAGTCT+AGG + chr4_1:48303124-48303143 None:intergenic 30.0%
ACAGCAACATGTATCAATTA+GGG - chr4_1:48303293-48303312 Msa0551950:intron 30.0%
TGCAGTATTTATAGAAGTCA+TGG - chr4_1:48303516-48303535 Msa0551950:intron 30.0%
GCAGTATTTATAGAAGTCAT+GGG - chr4_1:48303517-48303536 Msa0551950:intron 30.0%
! ACAAGGAATGGTTTAAGTTT+GGG + chr4_1:48303788-48303807 None:intergenic 30.0%
! TAGAAGGAGAATGAACTTTT+GGG + chr4_1:48303880-48303899 None:intergenic 30.0%
!! TTAGAAACTTTTCAAGCGTA+TGG + chr4_1:48304006-48304025 None:intergenic 30.0%
TGGGATATATTTGGATAAGT+AGG - chr4_1:48304097-48304116 Msa0551950:intron 30.0%
TGGAAATACAATCAATGCAA+AGG - chr4_1:48304193-48304212 Msa0551950:intron 30.0%
ATTTGCAACCAACTAAGTTT+GGG + chr4_1:48304399-48304418 None:intergenic 30.0%
AATTTGCAACCAACTAAGTT+TGG + chr4_1:48304400-48304419 None:intergenic 30.0%
GTTGCTAAAGATTAAGTTTG+GGG + chr4_1:48304433-48304452 None:intergenic 30.0%
! ACAAAAAGTTCTAATCCTAC+CGG - chr4_1:48304534-48304553 Msa0551950:intron 30.0%
TCAACAAATTAAAACAGGGT+AGG - chr4_1:48304584-48304603 Msa0551950:intron 30.0%
AAATTTGGCAATGAACCTTA+TGG - chr4_1:48304746-48304765 Msa0551950:intron 30.0%
!! ATTCCAAAAGTTCTAAAGGA+GGG + chr4_1:48304837-48304856 None:intergenic 30.0%
!! TATTCCAAAAGTTCTAAAGG+AGG + chr4_1:48304838-48304857 None:intergenic 30.0%
GTAACAGTTGTTTGATGAAA+CGG + chr4_1:48304861-48304880 None:intergenic 30.0%
TCAAACAACTGTTACTAAAC+TGG - chr4_1:48304866-48304885 Msa0551950:intron 30.0%
AACTGTTACTAAACTGGAAT+AGG - chr4_1:48304872-48304891 Msa0551950:intron 30.0%
CATTAATAAAAGACAAGTGC+AGG - chr4_1:48304916-48304935 Msa0551950:intron 30.0%
TCGGATGATGATATTAACAT+GGG + chr4_1:48305070-48305089 None:intergenic 30.0%
! TTACACATCAAGAAGAGTAT+GGG + chr4_1:48305192-48305211 None:intergenic 30.0%
TTTACACATCAAGAAGAGTA+TGG + chr4_1:48305193-48305212 None:intergenic 30.0%
TAATTGGATGAATGAGACTT+CGG + chr4_1:48305341-48305360 None:intergenic 30.0%
! GAAATATGAAGGGTATATGA+AGG + chr4_1:48305476-48305495 None:intergenic 30.0%
GGATTTGTGAAGAAATATGA+AGG + chr4_1:48305487-48305506 None:intergenic 30.0%
GACATGGAAGCTTAATTAAT+TGG + chr4_1:48305594-48305613 None:intergenic 30.0%
!! AAAGTACATTGATTTCAGTC+CGG + chr4_1:48305974-48305993 None:intergenic 30.0%
! AAAAGATTGAAAGGGTGTAT+CGG - chr4_1:48306002-48306021 Msa0551950:intron 30.0%
TGAATTCTTTGCAAATGCAA+GGG + chr4_1:48306031-48306050 None:intergenic 30.0%
TTGAATTCTTTGCAAATGCA+AGG + chr4_1:48306032-48306051 None:intergenic 30.0%
TCTTTGAGTCTGAATTAAGA+AGG + chr4_1:48306113-48306132 None:intergenic 30.0%
CTTAATTCAGACTCAAAGAA+AGG - chr4_1:48306114-48306133 Msa0551950:intron 30.0%
TGAAGAGTTTCGAAGTTATA+GGG + chr4_1:48306176-48306195 None:intergenic 30.0%
ATGAAGAGTTTCGAAGTTAT+AGG + chr4_1:48306177-48306196 None:intergenic 30.0%
TTTGAATGATTGTGGTTTGA+TGG - chr4_1:48306398-48306417 Msa0551950:intron 30.0%
TGGATTGATGAATTTGTGAT+TGG - chr4_1:48306426-48306445 Msa0551950:intron 30.0%
TGAATTTGTGATTGGAATGT+TGG - chr4_1:48306434-48306453 Msa0551950:intron 30.0%
TGAATAAGGAGATGAAAATG+AGG - chr4_1:48306476-48306495 Msa0551950:intron 30.0%
AATTCGTGAATGGAAGTTTA+GGG - chr4_1:48306501-48306520 Msa0551950:intron 30.0%
TTAAGGATTTATAGTGCTGT+AGG - chr4_1:48306576-48306595 Msa0551950:intron 30.0%
TAAGGATTTATAGTGCTGTA+GGG - chr4_1:48306577-48306596 Msa0551950:intron 30.0%
!!! AGTAACGGGCAAATTTTTAA+CGG - chr4_1:48306656-48306675 Msa0551950:intron 30.0%
!!! AAAACAATTTTTTTGGCCTG+AGG + chr4_1:48306882-48306901 None:intergenic 30.0%
! CTTTTCTTTTAATACAAGGC+AGG + chr4_1:48307029-48307048 None:intergenic 30.0%
!! CAACCCACTATTTAATTTTC+AGG + chr4_1:48307096-48307115 None:intergenic 30.0%
ATCTCAACCTATTCAATCTA+CGG + chr4_1:48307633-48307652 None:intergenic 30.0%
! ATTGAATAGGTTGAGATTCA+AGG - chr4_1:48307636-48307655 Msa0551950:intron 30.0%
! TTGAATAGGTTGAGATTCAA+GGG - chr4_1:48307637-48307656 Msa0551950:intron 30.0%
!! AGATTTTGTGGTCTTAGATA+TGG + chr4_1:48307867-48307886 None:intergenic 30.0%
AAAGTAATGGTCATTCTTGT+TGG - chr4_1:48307965-48307984 Msa0551950:intron 30.0%
TTTACTATCCCTTGTTCAAT+TGG + chr4_1:48308088-48308107 None:intergenic 30.0%
AAGAAGAAAGAAAAGGATGA+AGG + chr4_1:48308325-48308344 None:intergenic 30.0%
CCTTTCAAAGAAGAAAGAAA+AGG + chr4_1:48308332-48308351 None:intergenic 30.0%
! CCTTTTCTTTCTTCTTTGAA+AGG - chr4_1:48308329-48308348 Msa0551950:intron 30.0%
TTGATGAAGATTCAATCTTG+AGG + chr4_1:48308432-48308451 None:intergenic 30.0%
CGAAAGGAAGAAAAAAATAG+AGG + chr4_1:48308476-48308495 None:intergenic 30.0%
GTAGTTGAAGAAAATGATGA+GGG + chr4_1:48308538-48308557 None:intergenic 30.0%
TGTAGTTGAAGAAAATGATG+AGG + chr4_1:48308539-48308558 None:intergenic 30.0%
ACTACATCATCAACATTCTT+TGG - chr4_1:48308577-48308596 Msa0551950:intron 30.0%
TATTGAATTGAGGAGCAAAA+AGG + chr4_1:48308629-48308648 None:intergenic 30.0%
CTTGTAATGCTATTGAATTG+AGG + chr4_1:48308639-48308658 None:intergenic 30.0%
CATTACAAGACTCATTCTTA+GGG - chr4_1:48308650-48308669 Msa0551950:intron 30.0%
CAGAATCAATACTACAATTC+AGG + chr4_1:48308961-48308980 None:intergenic 30.0%
AATGAAGAAGCTAACTTCAT+GGG + chr4_1:48308997-48309016 None:intergenic 30.0%
AAATGAAGAAGCTAACTTCA+TGG + chr4_1:48308998-48309017 None:intergenic 30.0%
TCTAAGAACATTCTAGTGTT+TGG - chr4_1:48309315-48309334 Msa0551950:intron 30.0%
TGAATCATTGTATGATGCTT+GGG + chr4_1:48309427-48309446 None:intergenic 30.0%
TTTCCCTATGTCTAAGTATT+GGG + chr4_1:48309490-48309509 None:intergenic 30.0%
ATTTCCCTATGTCTAAGTAT+TGG + chr4_1:48309491-48309510 None:intergenic 30.0%
!!! GTTTATTTTGTTTTGCCACT+AGG - chr4_1:48302805-48302824 Msa0551950:CDS 30.0%
!! CTAATAAACATGGTTAGTCT+AGG + chr4_1:48303124-48303143 None:intergenic 30.0%
ACAGCAACATGTATCAATTA+GGG - chr4_1:48303293-48303312 Msa0551950:intron 30.0%
TGCAGTATTTATAGAAGTCA+TGG - chr4_1:48303516-48303535 Msa0551950:intron 30.0%
GCAGTATTTATAGAAGTCAT+GGG - chr4_1:48303517-48303536 Msa0551950:intron 30.0%
TAAGAGTTACACTACTTAGT+TGG - chr4_1:48311348-48311367 Msa0551950:intron 30.0%
GTTTGAATTATACGCATTTG+CGG + chr4_1:48311575-48311594 None:intergenic 30.0%
TGTTTCTTAGGGCAATTAAA+AGG - chr4_1:48311642-48311661 Msa0551950:intron 30.0%
ACTTATTCTACAGTTGGATT+AGG - chr4_1:48311821-48311840 Msa0551950:intron 30.0%
AAAATTTCAAGGAAGCTTGA+TGG - chr4_1:48311959-48311978 Msa0551950:intron 30.0%
AAATTTCAAGGAAGCTTGAT+GGG - chr4_1:48311960-48311979 Msa0551950:intron 30.0%
!!! AAGCATGTTTGTTTTGTTGT+AGG - chr4_1:48312178-48312197 Msa0551950:intron 30.0%
ACAGTGTTCTATTTACTATG+TGG - chr4_1:48312272-48312291 Msa0551950:intron 30.0%
TTGGATTCTATAACCCTTAT+TGG - chr4_1:48312351-48312370 Msa0551950:intron 30.0%
CTATTGTTGTGCACTTAATT+GGG - chr4_1:48312396-48312415 Msa0551950:intron 30.0%
TATTGTTGTGCACTTAATTG+GGG - chr4_1:48312397-48312416 Msa0551950:intron 30.0%
GTTATAGAATCCAAAATACC+TGG + chr4_1:48312427-48312446 None:intergenic 30.0%
ATAAACTGTATAAGCACTTC+AGG + chr4_1:48312617-48312636 None:intergenic 30.0%
! TGAAGTGCTTATACAGTTTA+TGG - chr4_1:48312616-48312635 Msa0551950:five_prime_UTR 30.0%
! AAAAGCTTTGCTATCTTACT+AGG - chr4_1:48312741-48312760 Msa0551950:intron 30.0%
CTTCTCAACAAATGCAAAAA+AGG + chr4_1:48312863-48312882 None:intergenic 30.0%
!! TTTTTGCATTTGTTGAGAAG+TGG - chr4_1:48312863-48312882 Msa0551950:five_prime_UTR 30.0%
GCTGTCACAAAATTATTCTT+TGG + chr4_1:48312904-48312923 None:intergenic 30.0%
CCAACCACATCATTAAAAAA+TGG + chr4_1:48313036-48313055 None:intergenic 30.0%
!!! CCATTTTTTAATGATGTGGT+TGG - chr4_1:48313033-48313052 Msa0551950:intron 30.0%
CAGCTAATATTGAAATGATG+AGG + chr4_1:48313185-48313204 None:intergenic 30.0%
ATTTCAATATTAGCTGCTGT+TGG - chr4_1:48313189-48313208 Msa0551950:five_prime_UTR 30.0%
GACTAATTTCTATGTCTAAG+AGG - chr4_1:48313445-48313464 Msa0551950:five_prime_UTR 30.0%
! GTGTTTGCTAAAAGTGAATG+TGG + chr4_1:48301705-48301724 None:intergenic 35.0%
TTCTATAACAGACAGAAGAG+AGG - chr4_1:48301889-48301908 Msa0551950:exon 35.0%
TTTCAGACACTACTTAGAAG+TGG - chr4_1:48301917-48301936 Msa0551950:CDS 35.0%
! TCAGTCTCAGTTTGGATTTT+GGG + chr4_1:48301951-48301970 None:intergenic 35.0%
! TTCAGTCTCAGTTTGGATTT+TGG + chr4_1:48301952-48301971 None:intergenic 35.0%
AGAATCAACTGTTGTATTGC+AGG - chr4_1:48302139-48302158 Msa0551950:CDS 35.0%
! GTTGTATTGCAGGAACATTT+TGG - chr4_1:48302149-48302168 Msa0551950:CDS 35.0%
! AGAAGTGTAAAGATTGACGA+CGG + chr4_1:48302287-48302306 None:intergenic 35.0%
AGAACAGATGACTCTGTTAA+TGG - chr4_1:48302328-48302347 Msa0551950:intron 35.0%
GATGCAGTAAAGTCTATCTT+AGG - chr4_1:48302373-48302392 Msa0551950:intron 35.0%
!!! TGTCATTGTTTTTGGGTTTC+AGG - chr4_1:48302461-48302480 Msa0551950:intron 35.0%
AACTCACATCATACTAACTG+AGG + chr4_1:48302564-48302583 None:intergenic 35.0%
GATTGATACTGATAGACGTT+TGG - chr4_1:48302680-48302699 Msa0551950:intron 35.0%
AAGTTAAAAACAGTCCTCGT+GGG + chr4_1:48302746-48302765 None:intergenic 35.0%
ATAGGTGCAGTAACCAATTA+GGG + chr4_1:48302933-48302952 None:intergenic 35.0%
AATAGGTGCAGTAACCAATT+AGG + chr4_1:48302934-48302953 None:intergenic 35.0%
CTAACTCAAGGGATTGATTA+GGG + chr4_1:48302999-48303018 None:intergenic 35.0%
TTAGACCACCTAAGGAATTA+GGG + chr4_1:48303044-48303063 None:intergenic 35.0%
ATTAGACCACCTAAGGAATT+AGG + chr4_1:48303045-48303064 None:intergenic 35.0%
GATGATTATTAGACCACCTA+AGG + chr4_1:48303052-48303071 None:intergenic 35.0%
GGTGGTCTAATAATCATCAA+AGG - chr4_1:48303054-48303073 Msa0551950:intron 35.0%
!! AAACATGGTTAGTCTAGGAA+TGG + chr4_1:48303119-48303138 None:intergenic 35.0%
CACAGCAACATGTATCAATT+AGG - chr4_1:48303292-48303311 Msa0551950:intron 35.0%
AGCTAAATCTCTCAGAGATT+AGG + chr4_1:48303339-48303358 None:intergenic 35.0%
! AGAATGAGGGTTACGATTTT+TGG + chr4_1:48303486-48303505 None:intergenic 35.0%
AAATGTTGAAGTCTGTTCGA+AGG + chr4_1:48303665-48303684 None:intergenic 35.0%
TCATGCAATTTCTACTGTTC+TGG + chr4_1:48303702-48303721 None:intergenic 35.0%
! CAAGGAATGGTTTAAGTTTG+GGG + chr4_1:48303787-48303806 None:intergenic 35.0%
! GACAAGGAATGGTTTAAGTT+TGG + chr4_1:48303789-48303808 None:intergenic 35.0%
! CTAGAAGGAGAATGAACTTT+TGG + chr4_1:48303881-48303900 None:intergenic 35.0%
!!! TACACACTTTTGAGGTCTTT+AGG - chr4_1:48304049-48304068 Msa0551950:intron 35.0%
!!! ACACACTTTTGAGGTCTTTA+GGG - chr4_1:48304050-48304069 Msa0551950:intron 35.0%
!! TGAGGTCTTTAGGGTTATAA+CGG - chr4_1:48304059-48304078 Msa0551950:intron 35.0%
! GGCTACACAAAATTTGAGTT+AGG - chr4_1:48304118-48304137 Msa0551950:intron 35.0%
!! GCATTGATTGTATTTCCACA+AGG + chr4_1:48304191-48304210 None:intergenic 35.0%
! CAATCGAGTTTGAAGTTACT+CGG - chr4_1:48304245-48304264 Msa0551950:intron 35.0%
TTTGCAACCAACTAAGTTTG+GGG + chr4_1:48304398-48304417 None:intergenic 35.0%
! ATTAAGTTTGGGGTTGCTAT+TGG + chr4_1:48304423-48304442 None:intergenic 35.0%
! TTACAAGCCTAGAGACTTTT+AGG + chr4_1:48304498-48304517 None:intergenic 35.0%
TTTCTTAACCAATTGTGAGC+CGG + chr4_1:48304556-48304575 None:intergenic 35.0%
TCTTTGTCAATTACACACTG+AGG + chr4_1:48304643-48304662 None:intergenic 35.0%
!! GTTCTAGAAATGTAGTTGCA+TGG - chr4_1:48304690-48304709 Msa0551950:intron 35.0%
!! TTCCAAAAGTTCTAAAGGAG+GGG + chr4_1:48304836-48304855 None:intergenic 35.0%
! CGGTATTCCAAAAGTTCTAA+AGG + chr4_1:48304841-48304860 None:intergenic 35.0%
CTCGGATGATGATATTAACA+TGG + chr4_1:48305071-48305090 None:intergenic 35.0%
TTGAGATCACTATCATAAGC+CGG - chr4_1:48305547-48305566 Msa0551950:intron 35.0%
TGCTAGATCATGAAGACTAT+TGG - chr4_1:48305636-48305655 Msa0551950:intron 35.0%
!! TTCTGAAATTCCTCTCAAGA+GGG + chr4_1:48305719-48305738 None:intergenic 35.0%
!! TTGGGTTGAAAAATTGAGGA+GGG + chr4_1:48305908-48305927 None:intergenic 35.0%
!! AGTGTTGGGTTGAAAAATTG+AGG + chr4_1:48305912-48305931 None:intergenic 35.0%
TCCTCGAACAAAAGATTGAA+AGG - chr4_1:48305993-48306012 Msa0551950:intron 35.0%
CCTCGAACAAAAGATTGAAA+GGG - chr4_1:48305994-48306013 Msa0551950:intron 35.0%
TGAGTCTGAATTAAGAAGGA+GGG + chr4_1:48306109-48306128 None:intergenic 35.0%
TTGAGTCTGAATTAAGAAGG+AGG + chr4_1:48306110-48306129 None:intergenic 35.0%
GAAGAGTTTCGAAGTTATAG+GGG + chr4_1:48306175-48306194 None:intergenic 35.0%
CGAAACTCTTCATAGATTGA+TGG - chr4_1:48306184-48306203 Msa0551950:intron 35.0%
TCATAGATTGATGGAACTCT+TGG - chr4_1:48306193-48306212 Msa0551950:intron 35.0%
CATAGATTGATGGAACTCTT+GGG - chr4_1:48306194-48306213 Msa0551950:intron 35.0%
TTGGTCATTGATGAAATGGA+TGG - chr4_1:48306218-48306237 Msa0551950:intron 35.0%
!!! GGGAAAGTTTTGAATGATTG+TGG - chr4_1:48306390-48306409 Msa0551950:intron 35.0%
!! TTGGAATGTTGGTTTGATGA+TGG - chr4_1:48306445-48306464 Msa0551950:intron 35.0%
AAATGAGGAGAATTCGTGAA+TGG - chr4_1:48306491-48306510 Msa0551950:intron 35.0%
GAATTCGTGAATGGAAGTTT+AGG - chr4_1:48306500-48306519 Msa0551950:intron 35.0%
! ATGGAAGTTTAGGGAAGTTT+TGG - chr4_1:48306510-48306529 Msa0551950:intron 35.0%
!! AAGTTTTGGTAGAGAAAGGT+AGG - chr4_1:48306524-48306543 Msa0551950:intron 35.0%
AAGGATTTATAGTGCTGTAG+GGG - chr4_1:48306578-48306597 Msa0551950:intron 35.0%
TTGTATGTAACGGCTAGTAA+CGG - chr4_1:48306641-48306660 Msa0551950:intron 35.0%
TTTCCTGTTCTTCAAAATCG+CGG - chr4_1:48306799-48306818 Msa0551950:intron 35.0%
TTCAGAACTTAAAGGAACTC+AGG + chr4_1:48306917-48306936 None:intergenic 35.0%
! AGTACCTTGCATGATTTTCT+TGG - chr4_1:48306968-48306987 Msa0551950:intron 35.0%
GTAAGGAACAAAAGCTGAAA+CGG + chr4_1:48307226-48307245 None:intergenic 35.0%
! GTGGTAAATTGGCTTATAAG+AGG + chr4_1:48307421-48307440 None:intergenic 35.0%
TTATAAGCCAATTTACCACC+TGG - chr4_1:48307422-48307441 Msa0551950:intron 35.0%
GTAATAAAGACTACTACCAC+TGG + chr4_1:48307449-48307468 None:intergenic 35.0%
GAAGATGTTGGAATGATAGA+GGG + chr4_1:48307569-48307588 None:intergenic 35.0%
TGAAGATGTTGGAATGATAG+AGG + chr4_1:48307570-48307589 None:intergenic 35.0%
CAAGAAGTGATTGAAGATGT+TGG + chr4_1:48307581-48307600 None:intergenic 35.0%
GGTAGTCTTCAATATCTTTG+AGG + chr4_1:48307735-48307754 None:intergenic 35.0%
ACATCTTCAAGTATACCGAA+AGG - chr4_1:48307920-48307939 Msa0551950:intron 35.0%
TGACCATTACTTTAGCTGAT+CGG + chr4_1:48307958-48307977 None:intergenic 35.0%
!!! ATGGTCATTCTTGTTGGTTT+TGG - chr4_1:48307971-48307990 Msa0551950:intron 35.0%
TGATGAAGAAGCTTAAGTGT+GGG + chr4_1:48308000-48308019 None:intergenic 35.0%
ATGATGAAGAAGCTTAAGTG+TGG + chr4_1:48308001-48308020 None:intergenic 35.0%
AGCTTCTTCATCATTGAAAG+TGG - chr4_1:48308007-48308026 Msa0551950:intron 35.0%
GCAATATTCTCATCATCCTT+AGG - chr4_1:48308175-48308194 Msa0551950:intron 35.0%
!! AAGACTTGTTGACTAAACGA+AGG + chr4_1:48308204-48308223 None:intergenic 35.0%
CTTCAGGTGAATATTCCTTT+CGG + chr4_1:48308268-48308287 None:intergenic 35.0%
GTTGCATGAACTTCTTGAAT+TGG - chr4_1:48308299-48308318 Msa0551950:intron 35.0%
! TCTTTCTTCTTTGAAAGGTG+AGG - chr4_1:48308334-48308353 Msa0551950:intron 35.0%
! CTTTCTTCTTTGAAAGGTGA+GGG - chr4_1:48308335-48308354 Msa0551950:intron 35.0%
TATGGAAGCTTCACATATGA+TGG - chr4_1:48308358-48308377 Msa0551950:intron 35.0%
! ACATATGATGGAATAACCTG+TGG - chr4_1:48308370-48308389 Msa0551950:intron 35.0%
ATGGAGTAGTTGAAAACGAA+AGG + chr4_1:48308492-48308511 None:intergenic 35.0%
!! GAATGTTGATGATGTAGTTG+AGG + chr4_1:48308575-48308594 None:intergenic 35.0%
!!! TCAACATTCTTTGGAGCTTT+TGG - chr4_1:48308586-48308605 Msa0551950:intron 35.0%
!!! TTTGGAGCTTTTGGAACTAA+AGG - chr4_1:48308595-48308614 Msa0551950:intron 35.0%
GCATTACAAGACTCATTCTT+AGG - chr4_1:48308649-48308668 Msa0551950:intron 35.0%
CAATTGGCTGAACAAAGTAA+AGG + chr4_1:48308703-48308722 None:intergenic 35.0%
AAGATGCTTGAAACTCAACT+GGG + chr4_1:48308739-48308758 None:intergenic 35.0%
GAAAGAACAATGAAGCTTCT+AGG + chr4_1:48308762-48308781 None:intergenic 35.0%
AACTTCATGAAGATGACACA+AGG + chr4_1:48308823-48308842 None:intergenic 35.0%
GCTTCTTCATTTAATCCTTC+TGG - chr4_1:48309006-48309025 Msa0551950:intron 35.0%
! ACAAATCGAAGCTCTAACTA+AGG + chr4_1:48309127-48309146 None:intergenic 35.0%
TTTGTTTGTTCATAGCTGCT+TGG - chr4_1:48309142-48309161 Msa0551950:intron 35.0%
!! AGAAAGAAAGAGGAGTGTTT+GGG + chr4_1:48309197-48309216 None:intergenic 35.0%
!! AAGAAAGAAAGAGGAGTGTT+TGG + chr4_1:48309198-48309217 None:intergenic 35.0%
GAAGCTAAGAAGAAAGAAAG+AGG + chr4_1:48309207-48309226 None:intergenic 35.0%
! CCAAGCTTTGATAGAAAACA+TGG + chr4_1:48309250-48309269 None:intergenic 35.0%
! CCATGTTTTCTATCAAAGCT+TGG - chr4_1:48309247-48309266 Msa0551950:intron 35.0%
GTGAATCATTGTATGATGCT+TGG + chr4_1:48309428-48309447 None:intergenic 35.0%
!! TAAGTATTGGGACAAGAAGA+TGG + chr4_1:48309478-48309497 None:intergenic 35.0%
TTGTCCCAATACTTAGACAT+AGG - chr4_1:48309483-48309502 Msa0551950:intron 35.0%
TGTCCCAATACTTAGACATA+GGG - chr4_1:48309484-48309503 Msa0551950:intron 35.0%
TGGTTGCTAACAATTCCAAA+CGG + chr4_1:48309561-48309580 None:intergenic 35.0%
TGTCTTGATGTCAAAAGCTA+CGG - chr4_1:48309758-48309777 Msa0551950:intron 35.0%
TTCTCCTAAATCTGCAACTA+TGG + chr4_1:48309880-48309899 None:intergenic 35.0%
TGAAATAATTCAACAGTCCC+CGG - chr4_1:48310198-48310217 Msa0551950:intron 35.0%
! CCAAACGTCTATCAAGTTTT+TGG + chr4_1:48310232-48310251 None:intergenic 35.0%
CCAAAAACTTGATAGACGTT+TGG - chr4_1:48310229-48310248 Msa0551950:intron 35.0%
AAGTTAAAAACAGTCCTCGT+GGG + chr4_1:48302746-48302765 None:intergenic 35.0%
ATAGGTGCAGTAACCAATTA+GGG + chr4_1:48302933-48302952 None:intergenic 35.0%
AATAGGTGCAGTAACCAATT+AGG + chr4_1:48302934-48302953 None:intergenic 35.0%
CTAACTCAAGGGATTGATTA+GGG + chr4_1:48302999-48303018 None:intergenic 35.0%
TTAGACCACCTAAGGAATTA+GGG + chr4_1:48303044-48303063 None:intergenic 35.0%
ATTAGACCACCTAAGGAATT+AGG + chr4_1:48303045-48303064 None:intergenic 35.0%
GATGATTATTAGACCACCTA+AGG + chr4_1:48303052-48303071 None:intergenic 35.0%
GGTGGTCTAATAATCATCAA+AGG - chr4_1:48303054-48303073 Msa0551950:intron 35.0%
!! AAACATGGTTAGTCTAGGAA+TGG + chr4_1:48303119-48303138 None:intergenic 35.0%
CACAGCAACATGTATCAATT+AGG - chr4_1:48303292-48303311 Msa0551950:intron 35.0%
AGCTAAATCTCTCAGAGATT+AGG + chr4_1:48303339-48303358 None:intergenic 35.0%
! AGAATGAGGGTTACGATTTT+TGG + chr4_1:48303486-48303505 None:intergenic 35.0%
AAATGTTGAAGTCTGTTCGA+AGG + chr4_1:48303665-48303684 None:intergenic 35.0%
TCATGCAATTTCTACTGTTC+TGG + chr4_1:48303702-48303721 None:intergenic 35.0%
CTACTCAAAGTATGCTAGTT+TGG + chr4_1:48311438-48311457 None:intergenic 35.0%
AAATGTCTTGCAAATCATCG+AGG - chr4_1:48311540-48311559 Msa0551950:intron 35.0%
AATGTCTTGCAAATCATCGA+GGG - chr4_1:48311541-48311560 Msa0551950:intron 35.0%
ACCTTTGTGCATGTTTCTTA+GGG - chr4_1:48311631-48311650 Msa0551950:intron 35.0%
TCTATCCATTGCTTGACATA+TGG + chr4_1:48311706-48311725 None:intergenic 35.0%
! TTGATCAAAGTCTGGGATTT+GGG + chr4_1:48311762-48311781 None:intergenic 35.0%
ACCATACTTGATCAAAGTCT+GGG + chr4_1:48311769-48311788 None:intergenic 35.0%
TCCTTCACTTATTCTACAGT+TGG - chr4_1:48311815-48311834 Msa0551950:intron 35.0%
TCCAACTGTAGAATAAGTGA+AGG + chr4_1:48311819-48311838 None:intergenic 35.0%
!! TTCAATGAGGATAATGGAGA+AGG + chr4_1:48312084-48312103 None:intergenic 35.0%
! TTCAGAAGGAGGAGATTTTA+AGG + chr4_1:48312207-48312226 None:intergenic 35.0%
TGAACACAAGACCATGAAAA+AGG - chr4_1:48312223-48312242 Msa0551950:intron 35.0%
GTGTTCTATTTACTATGTGG+TGG - chr4_1:48312275-48312294 Msa0551950:intron 35.0%
TATTTACTATGTGGTGGCAT+GGG - chr4_1:48312281-48312300 Msa0551950:intron 35.0%
AAACCAGTCAAAAGATTTCC+AGG + chr4_1:48312332-48312351 None:intergenic 35.0%
!!! GGAAATCTTTTGACTGGTTT+TGG - chr4_1:48312332-48312351 Msa0551950:intron 35.0%
CAATGTCAAGAAGCCAATAA+GGG + chr4_1:48312367-48312386 None:intergenic 35.0%
GCTATTGTTGTGCACTTAAT+TGG - chr4_1:48312395-48312414 Msa0551950:intron 35.0%
CATAAGCTCTCTCAAATACT+TGG - chr4_1:48312658-48312677 Msa0551950:five_prime_UTR 35.0%
AAGACACAGTATGTATGCAT+TGG + chr4_1:48312712-48312731 None:intergenic 35.0%
GAAATACCTATTCCTTGCAT+TGG - chr4_1:48312931-48312950 Msa0551950:five_prime_UTR 35.0%
TCAATTTCTTCCGCTTAGTT+TGG - chr4_1:48312965-48312984 Msa0551950:five_prime_UTR 35.0%
AATGATGTGGTTGGAATACT+TGG - chr4_1:48313042-48313061 Msa0551950:intron 35.0%
! TTGGAATACTTGGAGCTTTT+GGG - chr4_1:48313052-48313071 Msa0551950:intron 35.0%
CACAAAAGAAGATTGGAAGA+TGG - chr4_1:48313118-48313137 Msa0551950:intron 35.0%
!! TTGGAAGATGGACTAAAAAG+TGG - chr4_1:48313130-48313149 Msa0551950:intron 35.0%
TAGTCCTTGTAACTTAGAAG+TGG + chr4_1:48313430-48313449 None:intergenic 35.0%
GTACAAGTGAGTGTGATGAA+TGG + chr4_1:48301727-48301746 None:intergenic 40.0%
!! CTAGGAAGTGTTCTACTTCT+TGG + chr4_1:48301775-48301794 None:intergenic 40.0%
CTTCCTAGCAGATTTCAACA+TGG - chr4_1:48301787-48301806 Msa0551950:three_prime_UTR 40.0%
ACTCCATGTTGAAATCTGCT+AGG + chr4_1:48301793-48301812 None:intergenic 40.0%
! AGACTGATTCAGTCTCAGTT+TGG + chr4_1:48301959-48301978 None:intergenic 40.0%
! TCGAAGCACTTGGAATAGTT+GGG + chr4_1:48301990-48302009 None:intergenic 40.0%
ATGTTGAACCTGTTCTCTTG+AGG + chr4_1:48302025-48302044 None:intergenic 40.0%
CATATCATCACTGCTGTGAT+AGG - chr4_1:48302184-48302203 Msa0551950:CDS 40.0%
GCAAAGAGAATCATGACAAC+AGG + chr4_1:48302265-48302284 None:intergenic 40.0%
!!! CATTGTTTTTGGGTTTCAGG+AGG - chr4_1:48302464-48302483 Msa0551950:intron 40.0%
GTAAAAATATCGTTCCCACG+AGG - chr4_1:48302729-48302748 Msa0551950:intron 40.0%
GAAGTTAAAAACAGTCCTCG+TGG + chr4_1:48302747-48302766 None:intergenic 40.0%
AAACCAAATCTACTGCCTAG+TGG + chr4_1:48302823-48302842 None:intergenic 40.0%
AATAGGAGAGAGATGAGATC+AGG - chr4_1:48302886-48302905 Msa0551950:CDS 40.0%
TCCTCTATGTTTCCCCTAAT+TGG - chr4_1:48302917-48302936 Msa0551950:CDS 40.0%
ACCAATTAGGGGAAACATAG+AGG + chr4_1:48302921-48302940 None:intergenic 40.0%
TAGGTGCAGTAACCAATTAG+GGG + chr4_1:48302932-48302951 None:intergenic 40.0%
CCTAACTCAAGGGATTGATT+AGG + chr4_1:48303000-48303019 None:intergenic 40.0%
CCTAATCAATCCCTTGAGTT+AGG - chr4_1:48302997-48303016 Msa0551950:intron 40.0%
AAAAGAGGGTCCTAACTCAA+GGG + chr4_1:48303010-48303029 None:intergenic 40.0%
AAAAAGAGGGTCCTAACTCA+AGG + chr4_1:48303011-48303030 None:intergenic 40.0%
GGGGCTGTAGTTTAAAAAGA+GGG + chr4_1:48303024-48303043 None:intergenic 40.0%
AGGGGCTGTAGTTTAAAAAG+AGG + chr4_1:48303025-48303044 None:intergenic 40.0%
TAGACCACCTAAGGAATTAG+GGG + chr4_1:48303043-48303062 None:intergenic 40.0%
TAGGTCTAAGTCGAAAGCTA+TGG - chr4_1:48303155-48303174 Msa0551950:CDS 40.0%
AATCGTAACCCTCATTCTTC+AGG - chr4_1:48303488-48303507 Msa0551950:five_prime_UTR 40.0%
GCACTAATCCTGAAGAATGA+GGG + chr4_1:48303499-48303518 None:intergenic 40.0%
TGCACTAATCCTGAAGAATG+AGG + chr4_1:48303500-48303519 None:intergenic 40.0%
ATTACATCCTCCCTGTTTGA+GGG + chr4_1:48303594-48303613 None:intergenic 40.0%
AATTACATCCTCCCTGTTTG+AGG + chr4_1:48303595-48303614 None:intergenic 40.0%
TTGCTTCAAAAATCGCAGCA+CGG - chr4_1:48303615-48303634 Msa0551950:intron 40.0%
TAAACCATTCCTTGTCCTCA+AGG - chr4_1:48303793-48303812 Msa0551950:intron 40.0%
AATTCCTTGAGGACAAGGAA+TGG + chr4_1:48303800-48303819 None:intergenic 40.0%
AAGCAAATTCCTTGAGGACA+AGG + chr4_1:48303805-48303824 None:intergenic 40.0%
TGTTGCAAGCAAATTCCTTG+AGG + chr4_1:48303811-48303830 None:intergenic 40.0%
! TTGGGTACTATCGTTTTGTC+AGG + chr4_1:48303862-48303881 None:intergenic 40.0%
CTAGCTCATCTTTAGCTAGA+AGG + chr4_1:48303896-48303915 None:intergenic 40.0%
TCCTCGCATCAAATTGAAAC+AGG - chr4_1:48303947-48303966 Msa0551950:intron 40.0%
CCTCGCATCAAATTGAAACA+GGG - chr4_1:48303948-48303967 Msa0551950:intron 40.0%
!! GAGGTCTTTAGGGTTATAAC+GGG - chr4_1:48304060-48304079 Msa0551950:intron 40.0%
!! AGGTCTTTAGGGTTATAACG+GGG - chr4_1:48304061-48304080 Msa0551950:intron 40.0%
GGTGAAAGGTGGGATATATT+TGG - chr4_1:48304088-48304107 Msa0551950:intron 40.0%
GACAAGTCCTAAAAGTCTCT+AGG - chr4_1:48304488-48304507 Msa0551950:intron 40.0%
GGCTCACAATTGGTTAAGAA+AGG - chr4_1:48304555-48304574 Msa0551950:intron 40.0%
AAACAGGGTAGGCTTCAAAA+AGG - chr4_1:48304595-48304614 Msa0551950:intron 40.0%
AACCTTATGGCTGAGATTTC+TGG - chr4_1:48304759-48304778 Msa0551950:intron 40.0%
ACCTTATGGCTGAGATTTCT+GGG - chr4_1:48304760-48304779 Msa0551950:intron 40.0%
TGATTCAAAGGCGAAGTGTA+CGG + chr4_1:48304808-48304827 None:intergenic 40.0%
AGTGCAGGAGCAATTACAAT+AGG - chr4_1:48304931-48304950 Msa0551950:intron 40.0%
GTGCAGGAGCAATTACAATA+GGG - chr4_1:48304932-48304951 Msa0551950:intron 40.0%
AGCAATTACAATAGGGAGAC+AGG - chr4_1:48304939-48304958 Msa0551950:intron 40.0%
! ATGGCATCTTTGAAGGATTG+AGG + chr4_1:48305111-48305130 None:intergenic 40.0%
AATATTGCTCCATGTGCTCA+CGG - chr4_1:48305212-48305231 Msa0551950:intron 40.0%
TCATGCATGTGCAAGCTAAT+TGG + chr4_1:48305357-48305376 None:intergenic 40.0%
TGCATGAATTCCTCAAGCTT+TGG - chr4_1:48305370-48305389 Msa0551950:intron 40.0%
GCATGAATTCCTCAAGCTTT+GGG - chr4_1:48305371-48305390 Msa0551950:intron 40.0%
AACAACAAATGGAGCAAGGA+GGG + chr4_1:48305429-48305448 None:intergenic 40.0%
GTATATGAAGGAGAGAGAGA+GGG + chr4_1:48305464-48305483 None:intergenic 40.0%
AAATCCATCCATTACCGAGT+CGG - chr4_1:48305501-48305520 Msa0551950:intron 40.0%
AGTCTTCATGATCTAGCAAC+CGG + chr4_1:48305634-48305653 None:intergenic 40.0%
!! CTTCTGAAATTCCTCTCAAG+AGG + chr4_1:48305720-48305739 None:intergenic 40.0%
!! GTTGGGTTGAAAAATTGAGG+AGG + chr4_1:48305909-48305928 None:intergenic 40.0%
! CCCTTTCAATCTTTTGTTCG+AGG + chr4_1:48305997-48306016 None:intergenic 40.0%
ATTGAATGAGATGATCGACG+AGG + chr4_1:48306076-48306095 None:intergenic 40.0%
GAGTCTGAATTAAGAAGGAG+GGG + chr4_1:48306108-48306127 None:intergenic 40.0%
! ATGAAATGGATGGCGTTTTC+TGG - chr4_1:48306228-48306247 Msa0551950:intron 40.0%
CCATCTTCTCAAACCACAAA+TGG + chr4_1:48306346-48306365 None:intergenic 40.0%
CCATTTGTGGTTTGAGAAGA+TGG - chr4_1:48306343-48306362 Msa0551950:intron 40.0%
TGGTTTGAGAAGATGGTGAA+TGG - chr4_1:48306350-48306369 Msa0551950:intron 40.0%
GGTTTGAGAAGATGGTGAAT+GGG - chr4_1:48306351-48306370 Msa0551950:intron 40.0%
! ATGGGAAGCTTTGTGAAGTT+TGG - chr4_1:48306369-48306388 Msa0551950:intron 40.0%
! TGGGAAGCTTTGTGAAGTTT+GGG - chr4_1:48306370-48306389 Msa0551950:intron 40.0%
GAATGATTGTGGTTTGATGG+TGG - chr4_1:48306401-48306420 Msa0551950:intron 40.0%
!! ATTGTGGTTTGATGGTGGTT+TGG - chr4_1:48306406-48306425 Msa0551950:intron 40.0%
!! ATGTTGGTTTGATGATGGTC+AGG - chr4_1:48306450-48306469 Msa0551950:intron 40.0%
TGATGGTCAGGAAGTGAATA+AGG - chr4_1:48306462-48306481 Msa0551950:intron 40.0%
!! AGGGAAGTTTTGGTAGAGAA+AGG - chr4_1:48306520-48306539 Msa0551950:intron 40.0%
GTAGAGAAAGGTAGGAAGAA+TGG - chr4_1:48306532-48306551 Msa0551950:intron 40.0%
TGTATGTAACGGCTAGTAAC+GGG - chr4_1:48306642-48306661 Msa0551950:intron 40.0%
! ACGGGCAAATTTTTAACGGT+TGG - chr4_1:48306660-48306679 Msa0551950:intron 40.0%
!!! GTAACGGCTAGTTTTTGCAA+CGG - chr4_1:48306699-48306718 Msa0551950:intron 40.0%
!! GGCGCGATTTCTTTAAAACA+GGG - chr4_1:48306769-48306788 Msa0551950:intron 40.0%
CTTGCCAAGAAAATCATGCA+AGG + chr4_1:48306975-48306994 None:intergenic 40.0%
! TGCATGATTTTCTTGGCAAG+AGG - chr4_1:48306975-48306994 Msa0551950:intron 40.0%
GAGACATCAACTGATCCTTA+GGG + chr4_1:48307167-48307186 None:intergenic 40.0%
AGAGACATCAACTGATCCTT+AGG + chr4_1:48307168-48307187 None:intergenic 40.0%
TCTCTCCCTCTTCATTGTTT+GGG - chr4_1:48307183-48307202 Msa0551950:intron 40.0%
ACAAGGAACTTTCAAGGGTA+AGG + chr4_1:48307243-48307262 None:intergenic 40.0%
ATACACCATTGAAAAGCAGC+CGG - chr4_1:48307371-48307390 Msa0551950:intron 40.0%
CTTATAAGAGGATTCCCTGT+GGG + chr4_1:48307409-48307428 None:intergenic 40.0%
AAGTATGGGGAATTGACAAC+TGG + chr4_1:48307479-48307498 None:intergenic 40.0%
!! ATTCCCCATACTTGTTGTCA+CGG - chr4_1:48307486-48307505 Msa0551950:intron 40.0%
ACATCCGTGACAACAAGTAT+GGG + chr4_1:48307493-48307512 None:intergenic 40.0%
CAGATGCAACAACAATCATC+AGG + chr4_1:48307518-48307537 None:intergenic 40.0%
TCAACCTATTCAATCTACGG+AGG + chr4_1:48307630-48307649 None:intergenic 40.0%
TTTCTTCCACAACGTCAATC+CGG - chr4_1:48307675-48307694 Msa0551950:intron 40.0%
ATGAGAATCCCAAGTGTTAC+CGG + chr4_1:48307697-48307716 None:intergenic 40.0%
AACACTTGGGATTCTCATCT+TGG - chr4_1:48307699-48307718 Msa0551950:intron 40.0%
GCTAATGTTGAGGTTCCATA+AGG + chr4_1:48307762-48307781 None:intergenic 40.0%
GCTTTGATTGATGTTGAACG+TGG + chr4_1:48307788-48307807 None:intergenic 40.0%
AAAGGTCTTCCTAGAATGAG+TGG - chr4_1:48307824-48307843 Msa0551950:intron 40.0%
! TCTAAGACCACAAAATCTGC+TGG - chr4_1:48307869-48307888 Msa0551950:intron 40.0%
! GGTATTTCCAGCAGATTTTG+TGG + chr4_1:48307879-48307898 None:intergenic 40.0%
GCTAGTCAAGGTTAATGACT+TGG + chr4_1:48307900-48307919 None:intergenic 40.0%
ACTTGAAGATGTGCTAGTCA+AGG + chr4_1:48307912-48307931 None:intergenic 40.0%
CGGTCAATCTCTTATCCTTT+CGG + chr4_1:48307938-48307957 None:intergenic 40.0%
TGACCGATCAGCTAAAGTAA+TGG - chr4_1:48307952-48307971 Msa0551950:intron 40.0%
GATGAAGAAGCTTAAGTGTG+GGG + chr4_1:48307999-48308018 None:intergenic 40.0%
! GGAAGAGCTTTATGTGACTT+GGG + chr4_1:48308052-48308071 None:intergenic 40.0%
! TGGAAGAGCTTTATGTGACT+TGG + chr4_1:48308053-48308072 None:intergenic 40.0%
AAAGCTCTTCCAATGTCTAC+CGG - chr4_1:48308061-48308080 Msa0551950:intron 40.0%
TATCCCTTGTTCAATTGGAC+CGG + chr4_1:48308083-48308102 None:intergenic 40.0%
! GCAACTTTTCTCACAACTTC+AGG + chr4_1:48308284-48308303 None:intergenic 40.0%
! TTCTTTGAAAGGTGAGGGTA+TGG - chr4_1:48308340-48308359 Msa0551950:intron 40.0%
!! TGTTGATGATGTAGTTGAGG+TGG + chr4_1:48308572-48308591 None:intergenic 40.0%
TTGGCTGAACAAAGTAAAGG+CGG + chr4_1:48308700-48308719 None:intergenic 40.0%
AGATGCTTGAAACTCAACTG+GGG + chr4_1:48308738-48308757 None:intergenic 40.0%
GAAGATGCTTGAAACTCAAC+TGG + chr4_1:48308740-48308759 None:intergenic 40.0%
ATAGTTTCCTCAAGAGCTGA+TGG - chr4_1:48308847-48308866 Msa0551950:intron 40.0%
!! TTCCTTTGTTGTTGTTGAGG+AGG - chr4_1:48308871-48308890 Msa0551950:intron 40.0%
ACTTCATGGGAGGTTATCAA+AGG + chr4_1:48308984-48309003 None:intergenic 40.0%
GCAATCAAGTGTGACTTATG+TGG + chr4_1:48309060-48309079 None:intergenic 40.0%
GCTCTAACTAAGGAGTTTCA+AGG + chr4_1:48309117-48309136 None:intergenic 40.0%
!! GAAAGAAAGAGGAGTGTTTG+GGG + chr4_1:48309196-48309215 None:intergenic 40.0%
GCTTTGATAGAAAACATGGC+TGG + chr4_1:48309246-48309265 None:intergenic 40.0%
AATGTTCTTAGATGCTTCCG+CGG + chr4_1:48309307-48309326 None:intergenic 40.0%
TACCTCCAAATCTTCACTGA+GGG + chr4_1:48309348-48309367 None:intergenic 40.0%
ATACCTCCAAATCTTCACTG+AGG + chr4_1:48309349-48309368 None:intergenic 40.0%
!! GATTTGGAGGTATTGCTTCT+CGG - chr4_1:48309356-48309375 Msa0551950:intron 40.0%
TTCTCGGTGAACTCATGATT+AGG - chr4_1:48309372-48309391 Msa0551950:intron 40.0%
TCTCGGTGAACTCATGATTA+GGG - chr4_1:48309373-48309392 Msa0551950:intron 40.0%
TCTAACTTCAAGCAAGGAGA+GGG + chr4_1:48309450-48309469 None:intergenic 40.0%
GAGATCTCTAACTTCAAGCA+AGG + chr4_1:48309456-48309475 None:intergenic 40.0%
AGAGTTAGAGCTGAAGTTCT+TGG + chr4_1:48309520-48309539 None:intergenic 40.0%
GGTTGCTAACAATTCCAAAC+GGG + chr4_1:48309560-48309579 None:intergenic 40.0%
CTATTTCCTTTCACCTTGAC+GGG + chr4_1:48309597-48309616 None:intergenic 40.0%
! GCTATTTCCTTTCACCTTGA+CGG + chr4_1:48309598-48309617 None:intergenic 40.0%
CTGAAGCACAAAAGAAGCTA+AGG + chr4_1:48309620-48309639 None:intergenic 40.0%
! CTTCTTTTGTGCTTCAGTCA+CGG - chr4_1:48309623-48309642 Msa0551950:intron 40.0%
TAAGGGACAAGCAATTCGAT+GGG + chr4_1:48309722-48309741 None:intergenic 40.0%
TTAAGGGACAAGCAATTCGA+TGG + chr4_1:48309723-48309742 None:intergenic 40.0%
AACTGTCCTCAACGGTTTAA+GGG + chr4_1:48309739-48309758 None:intergenic 40.0%
ATCAAGACAACTGTCCTCAA+CGG + chr4_1:48309747-48309766 None:intergenic 40.0%
GTCTTGATGTCAAAAGCTAC+GGG - chr4_1:48309759-48309778 Msa0551950:intron 40.0%
TCTTGATGTCAAAAGCTACG+GGG - chr4_1:48309760-48309779 Msa0551950:intron 40.0%
! GTTAGCTGGTTGAAAAGTGT+GGG - chr4_1:48309782-48309801 Msa0551950:intron 40.0%
CCTAAATCTGCAACTATGGA+AGG + chr4_1:48309876-48309895 None:intergenic 40.0%
CCTTCCATAGTTGCAGATTT+AGG - chr4_1:48309873-48309892 Msa0551950:intron 40.0%
CTAGCAGTCCTTTCAATTTC+TGG - chr4_1:48310005-48310024 Msa0551950:intron 40.0%
TGGATTGAATTCGAGATCGT+CGG - chr4_1:48310025-48310044 Msa0551950:intron 40.0%
!!! GGTATTTTGCTGTTTATGCG+AGG + chr4_1:48310062-48310081 None:intergenic 40.0%
GTAAAAATATCGTTCCCACG+AGG - chr4_1:48302729-48302748 Msa0551950:intron 40.0%
GAAGTTAAAAACAGTCCTCG+TGG + chr4_1:48302747-48302766 None:intergenic 40.0%
AAACCAAATCTACTGCCTAG+TGG + chr4_1:48302823-48302842 None:intergenic 40.0%
AATAGGAGAGAGATGAGATC+AGG - chr4_1:48302886-48302905 Msa0551950:CDS 40.0%
TCCTCTATGTTTCCCCTAAT+TGG - chr4_1:48302917-48302936 Msa0551950:CDS 40.0%
ACCAATTAGGGGAAACATAG+AGG + chr4_1:48302921-48302940 None:intergenic 40.0%
TAGGTGCAGTAACCAATTAG+GGG + chr4_1:48302932-48302951 None:intergenic 40.0%
CCTAACTCAAGGGATTGATT+AGG + chr4_1:48303000-48303019 None:intergenic 40.0%
CCTAATCAATCCCTTGAGTT+AGG - chr4_1:48302997-48303016 Msa0551950:intron 40.0%
AAAAGAGGGTCCTAACTCAA+GGG + chr4_1:48303010-48303029 None:intergenic 40.0%
AAAAAGAGGGTCCTAACTCA+AGG + chr4_1:48303011-48303030 None:intergenic 40.0%
GGGGCTGTAGTTTAAAAAGA+GGG + chr4_1:48303024-48303043 None:intergenic 40.0%
AGGGGCTGTAGTTTAAAAAG+AGG + chr4_1:48303025-48303044 None:intergenic 40.0%
TAGACCACCTAAGGAATTAG+GGG + chr4_1:48303043-48303062 None:intergenic 40.0%
TAGGTCTAAGTCGAAAGCTA+TGG - chr4_1:48303155-48303174 Msa0551950:CDS 40.0%
AATCGTAACCCTCATTCTTC+AGG - chr4_1:48303488-48303507 Msa0551950:five_prime_UTR 40.0%
GCACTAATCCTGAAGAATGA+GGG + chr4_1:48303499-48303518 None:intergenic 40.0%
TGCACTAATCCTGAAGAATG+AGG + chr4_1:48303500-48303519 None:intergenic 40.0%
ATTACATCCTCCCTGTTTGA+GGG + chr4_1:48303594-48303613 None:intergenic 40.0%
AATTACATCCTCCCTGTTTG+AGG + chr4_1:48303595-48303614 None:intergenic 40.0%
TTGCTTCAAAAATCGCAGCA+CGG - chr4_1:48303615-48303634 Msa0551950:intron 40.0%
ACTTTGAGTAGTAAGCAGCT+CGG - chr4_1:48311447-48311466 Msa0551950:intron 40.0%
GACCTTTGTGCATGTTTCTT+AGG - chr4_1:48311630-48311649 Msa0551950:intron 40.0%
! CTTGATCAAAGTCTGGGATT+TGG + chr4_1:48311763-48311782 None:intergenic 40.0%
TCCCAGACTTTGATCAAGTA+TGG - chr4_1:48311765-48311784 Msa0551950:intron 40.0%
CACCATACTTGATCAAAGTC+TGG + chr4_1:48311770-48311789 None:intergenic 40.0%
CAGACTTTGATCAAGTATGG+TGG - chr4_1:48311768-48311787 Msa0551950:intron 40.0%
! TCTACAGTTGGATTAGGTCT+AGG - chr4_1:48311827-48311846 Msa0551950:intron 40.0%
TATGCTTGAACCTGCAACTT+TGG + chr4_1:48311858-48311877 None:intergenic 40.0%
AGCTTGATGGGAATTAGCAT+TGG - chr4_1:48311972-48311991 Msa0551950:intron 40.0%
TGGAGGAATTTACAAGCTCT+AGG - chr4_1:48312038-48312057 Msa0551950:intron 40.0%
GGAGGAATTTACAAGCTCTA+GGG - chr4_1:48312039-48312058 Msa0551950:intron 40.0%
! GAGGAATTTACAAGCTCTAG+GGG - chr4_1:48312040-48312059 Msa0551950:intron 40.0%
!! TTCATGGTCTTGTGTTCAGA+AGG + chr4_1:48312221-48312240 None:intergenic 40.0%
AACTATGATGCTCACCAAAG+TGG + chr4_1:48312249-48312268 None:intergenic 40.0%
CTATTTACTATGTGGTGGCA+TGG - chr4_1:48312280-48312299 Msa0551950:intron 40.0%
! GTACCTGGAAATCTTTTGAC+TGG - chr4_1:48312326-48312345 Msa0551950:intron 40.0%
GCAATGTCAAGAAGCCAATA+AGG + chr4_1:48312368-48312387 None:intergenic 40.0%
GTGCACAACAATAGCAAAGT+TGG + chr4_1:48312390-48312409 None:intergenic 40.0%
TACACACCAATGCAAGGAAT+AGG + chr4_1:48312940-48312959 None:intergenic 40.0%
CTAAGCGGAAGAAATTGAGT+TGG + chr4_1:48312963-48312982 None:intergenic 40.0%
! ATTTCTTCCGCTTAGTTTGG+AGG - chr4_1:48312968-48312987 Msa0551950:five_prime_UTR 40.0%
! GTTGGAATACTTGGAGCTTT+TGG - chr4_1:48313051-48313070 Msa0551950:intron 40.0%
!!! TACTTGGAGCTTTTGGGTTT+TGG - chr4_1:48313058-48313077 Msa0551950:intron 40.0%
!! TGTGCCACTTCTAAGTTACA+AGG - chr4_1:48313423-48313442 Msa0551950:five_prime_UTR 40.0%
CTTGGAATAGTTGGGCTCAA+TGG + chr4_1:48301982-48302001 None:intergenic 45.0%
! GTCGAAGCACTTGGAATAGT+TGG + chr4_1:48301991-48302010 None:intergenic 45.0%
!! TGGAGTGCTTTCATTGGCTT+GGG - chr4_1:48302210-48302229 Msa0551950:CDS 45.0%
TTGCCACTAGGCAGTAGATT+TGG - chr4_1:48302817-48302836 Msa0551950:CDS 45.0%
ACTACAGCCCCTAATTCCTT+AGG - chr4_1:48303033-48303052 Msa0551950:intron 45.0%
!! GTGCGATTTTAACACCCAGA+AGG + chr4_1:48303454-48303473 None:intergenic 45.0%
TGATGCGAGGAGTTGTGAAT+TGG + chr4_1:48303938-48303957 None:intergenic 45.0%
CCCTGTTTCAATTTGATGCG+AGG + chr4_1:48303951-48303970 None:intergenic 45.0%
! TTAGGGTTATAACGGGGCTT+AGG - chr4_1:48304067-48304086 Msa0551950:intron 45.0%
! TATAACGGGGCTTAGGTGAA+AGG - chr4_1:48304074-48304093 Msa0551950:intron 45.0%
TCCTTCGATCATTCACCTTG+TGG - chr4_1:48304173-48304192 Msa0551950:intron 45.0%
TCCACAAGGTGAATGATCGA+AGG + chr4_1:48304177-48304196 None:intergenic 45.0%
! AACCAACTAAGTTTGGGGTG+GGG + chr4_1:48304393-48304412 None:intergenic 45.0%
! CAACCAACTAAGTTTGGGGT+GGG + chr4_1:48304394-48304413 None:intergenic 45.0%
!! TAATCCTACCGGCTCACAAT+TGG - chr4_1:48304545-48304564 Msa0551950:intron 45.0%
TTAACCAATTGTGAGCCGGT+AGG + chr4_1:48304552-48304571 None:intergenic 45.0%
TAGGCTTCAAAAAGGCTCAC+AGG - chr4_1:48304603-48304622 Msa0551950:intron 45.0%
TCCCAGAAATCTCAGCCATA+AGG + chr4_1:48304764-48304783 None:intergenic 45.0%
!!! CACCCCTCCTTTAGAACTTT+TGG - chr4_1:48304831-48304850 Msa0551950:intron 45.0%
CAATAGGGAGACAGGTTCAA+TGG - chr4_1:48304947-48304966 Msa0551950:intron 45.0%
! AACATGGGCTGATCTACTGA+TGG + chr4_1:48305055-48305074 None:intergenic 45.0%
TTTGAAGGATTGAGGACACC+GGG + chr4_1:48305103-48305122 None:intergenic 45.0%
! CTTTGAAGGATTGAGGACAC+CGG + chr4_1:48305104-48305123 None:intergenic 45.0%
ATACCACCGAGCAAGATCAA+GGG + chr4_1:48305135-48305154 None:intergenic 45.0%
AATACCACCGAGCAAGATCA+AGG + chr4_1:48305136-48305155 None:intergenic 45.0%
ATATTGCTCCATGTGCTCAC+GGG - chr4_1:48305213-48305232 Msa0551950:intron 45.0%
CTCTCATAAGACCCACGAAT+CGG - chr4_1:48305247-48305266 Msa0551950:intron 45.0%
CAACAACAAATGGAGCAAGG+AGG + chr4_1:48305430-48305449 None:intergenic 45.0%
AGGCAACAACAAATGGAGCA+AGG + chr4_1:48305433-48305452 None:intergenic 45.0%
GACAGCAAGGCAACAACAAA+TGG + chr4_1:48305440-48305459 None:intergenic 45.0%
GGTATATGAAGGAGAGAGAG+AGG + chr4_1:48305465-48305484 None:intergenic 45.0%
! TATGAAGCCAATCACCGACT+CGG + chr4_1:48305518-48305537 None:intergenic 45.0%
TTGGTTGTGTGAGCAACAGT+TGG + chr4_1:48305575-48305594 None:intergenic 45.0%
AACACCACACAATTGGGACA+TGG + chr4_1:48305610-48305629 None:intergenic 45.0%
GTCTTCATGATCTAGCAACC+GGG + chr4_1:48305633-48305652 None:intergenic 45.0%
CATGAAGACTATTGGCCAAG+AGG - chr4_1:48305644-48305663 Msa0551950:intron 45.0%
TATAGATATTGGCCGCCTCT+TGG + chr4_1:48305662-48305681 None:intergenic 45.0%
AAGAGGCGGCCAATATCTAT+AGG - chr4_1:48305661-48305680 Msa0551950:intron 45.0%
AGAGGCGGCCAATATCTATA+GGG - chr4_1:48305662-48305681 Msa0551950:intron 45.0%
!! AAGGGGCACCCTATAGATAT+TGG + chr4_1:48305673-48305692 None:intergenic 45.0%
AAGATGCACTCTCAAGAGTC+TGG - chr4_1:48305743-48305762 Msa0551950:intron 45.0%
ACATAAGACACCCATGCCTT+GGG - chr4_1:48305769-48305788 Msa0551950:intron 45.0%
AGATCATCACCACCATGTGT+AGG + chr4_1:48305852-48305871 None:intergenic 45.0%
!! GTCAAAGGTATCCTCCGTAA+TGG - chr4_1:48305873-48305892 Msa0551950:intron 45.0%
GAGGGAGAGATTTGCCATTA+CGG + chr4_1:48305890-48305909 None:intergenic 45.0%
! TTTTCAACCCAACACTCCTC+CGG - chr4_1:48305916-48305935 Msa0551950:intron 45.0%
ATGGCTGAATGTTCAAGCAC+CGG + chr4_1:48305938-48305957 None:intergenic 45.0%
CGACGAGGCAAACAACAAAA+CGG + chr4_1:48306061-48306080 None:intergenic 45.0%
CTGAATTAAGAAGGAGGGGA+TGG + chr4_1:48306104-48306123 None:intergenic 45.0%
GTTTCGAAGTTATAGGGGAG+AGG + chr4_1:48306170-48306189 None:intergenic 45.0%
ATTGATGGAACTCTTGGGCT+TGG - chr4_1:48306199-48306218 Msa0551950:intron 45.0%
! GGGCTTGGTCATTGATGAAA+TGG - chr4_1:48306214-48306233 Msa0551950:intron 45.0%
! AAATGGATGGCGTTTTCTGG+TGG - chr4_1:48306231-48306250 Msa0551950:intron 45.0%
! CGTTTGGATTTGCTTGTGGA+TGG - chr4_1:48306273-48306292 Msa0551950:intron 45.0%
! GATTTGCTTGTGGATGGCTT+GGG - chr4_1:48306279-48306298 Msa0551950:intron 45.0%
ATTTGCTTGTGGATGGCTTG+GGG - chr4_1:48306280-48306299 Msa0551950:intron 45.0%
TCTTTGAGCGGGTGTTTCTT+TGG - chr4_1:48306313-48306332 Msa0551950:intron 45.0%
! CGGCGCGATTTTGTATGTAA+CGG - chr4_1:48306631-48306650 Msa0551950:intron 45.0%
!!! GGCTAGTTTTTGCAACGGTT+AGG - chr4_1:48306704-48306723 Msa0551950:intron 45.0%
TTTCAAGCAAAATCGCGCTG+CGG - chr4_1:48306731-48306750 Msa0551950:intron 45.0%
!! CGGCGCGATTTCTTTAAAAC+AGG - chr4_1:48306768-48306787 Msa0551950:intron 45.0%
! GTAGTGTGTTTTGCTTCCTC+AGG - chr4_1:48306863-48306882 Msa0551950:intron 45.0%
!! AGTGACGATAAAGAAGCGCT+GGG + chr4_1:48307126-48307145 None:intergenic 45.0%
! TAGTGACGATAAAGAAGCGC+TGG + chr4_1:48307127-48307146 None:intergenic 45.0%
! TTGACTGATGACGATCCCTA+AGG - chr4_1:48307149-48307168 Msa0551950:intron 45.0%
GTCTCTCCCTCTTCATTGTT+TGG - chr4_1:48307182-48307201 Msa0551950:intron 45.0%
GGACTCCCAAACAATGAAGA+GGG + chr4_1:48307191-48307210 None:intergenic 45.0%
AGGACTCCCAAACAATGAAG+AGG + chr4_1:48307192-48307211 None:intergenic 45.0%
TGTTTGGGAGTCCTCCTTTA+CGG - chr4_1:48307198-48307217 Msa0551950:intron 45.0%
AAGCTGAAACGGTACCGTAA+AGG + chr4_1:48307215-48307234 None:intergenic 45.0%
GGTGCACAAGGAACTTTCAA+GGG + chr4_1:48307248-48307267 None:intergenic 45.0%
TGGTGCACAAGGAACTTTCA+AGG + chr4_1:48307249-48307268 None:intergenic 45.0%
TTGATGAAGCTGTGGACCTA+AGG + chr4_1:48307277-48307296 None:intergenic 45.0%
!! TTAGGAGGTACTGTGACGAA+GGG + chr4_1:48307319-48307338 None:intergenic 45.0%
!! ATTAGGAGGTACTGTGACGA+AGG + chr4_1:48307320-48307339 None:intergenic 45.0%
GCTTATAAGAGGATTCCCTG+TGG + chr4_1:48307410-48307429 None:intergenic 45.0%
CATCCGTGACAACAAGTATG+GGG + chr4_1:48307492-48307511 None:intergenic 45.0%
GACATCCGTGACAACAAGTA+TGG + chr4_1:48307494-48307513 None:intergenic 45.0%
!! GATAGAGGGTGTTAAGCAAC+TGG + chr4_1:48307555-48307574 None:intergenic 45.0%
TCCACCTCCGTAGATTGAAT+AGG - chr4_1:48307623-48307642 Msa0551950:intron 45.0%
ACCTATTCAATCTACGGAGG+TGG + chr4_1:48307627-48307646 None:intergenic 45.0%
AACGTCAATCCGGTAACACT+TGG - chr4_1:48307685-48307704 Msa0551950:intron 45.0%
ACGTCAATCCGGTAACACTT+GGG - chr4_1:48307686-48307705 Msa0551950:intron 45.0%
TGAAGACTACCTGCTCCTTA+TGG - chr4_1:48307744-48307763 Msa0551950:intron 45.0%
AACGTGGAGAGCTAATGTTG+AGG + chr4_1:48307772-48307791 None:intergenic 45.0%
GAAGACATGCCACTCATTCT+AGG + chr4_1:48307836-48307855 None:intergenic 45.0%
TCAATTGGACCGGTAGACAT+TGG + chr4_1:48308073-48308092 None:intergenic 45.0%
TCTACCGGTCCAATTGAACA+AGG - chr4_1:48308076-48308095 Msa0551950:intron 45.0%
CTACCGGTCCAATTGAACAA+GGG - chr4_1:48308077-48308096 Msa0551950:intron 45.0%
!! CAAGGGATAGTAAAAGCACC+AGG - chr4_1:48308094-48308113 Msa0551950:intron 45.0%
GACTAAACGAAGGAAGCCTA+AGG + chr4_1:48308194-48308213 None:intergenic 45.0%
GAAAGATGGAGACAAACCAC+AGG + chr4_1:48308389-48308408 None:intergenic 45.0%
! TGATGATGTAGTTGAGGTGG+AGG + chr4_1:48308569-48308588 None:intergenic 45.0%
! CAAAGTAAAGGCGGATTCTC+AGG + chr4_1:48308691-48308710 None:intergenic 45.0%
GGGGCAATTAGCTAAGCAAT+TGG + chr4_1:48308719-48308738 None:intergenic 45.0%
!! GGCTTCCTTTGTTGTTGTTG+AGG - chr4_1:48308868-48308887 Msa0551950:intron 45.0%
CTCCTCCTCAACAACAACAA+AGG + chr4_1:48308876-48308895 None:intergenic 45.0%
GAAGAAGCTAACTTCATGGG+AGG + chr4_1:48308994-48309013 None:intergenic 45.0%
AACGGTGAATGTGTTCCAGA+AGG + chr4_1:48309024-48309043 None:intergenic 45.0%
!! TTCTGGAACACATTCACCGT+TGG - chr4_1:48309023-48309042 Msa0551950:intron 45.0%
! TCTGGAACACATTCACCGTT+GGG - chr4_1:48309024-48309043 Msa0551950:intron 45.0%
TGTGGTGAAGAACATCCCAA+CGG + chr4_1:48309042-48309061 None:intergenic 45.0%
GGAGTTTCAAGGCTTCACTT+TGG + chr4_1:48309106-48309125 None:intergenic 45.0%
TCATAGCTGCTTGGTTAGCA+AGG - chr4_1:48309151-48309170 Msa0551950:intron 45.0%
ATGTTCTTAGATGCTTCCGC+GGG + chr4_1:48309306-48309325 None:intergenic 45.0%
TTACCCCCTCAGTGAAGATT+TGG - chr4_1:48309340-48309359 Msa0551950:intron 45.0%
ACCTCCAAATCTTCACTGAG+GGG + chr4_1:48309347-48309366 None:intergenic 45.0%
CTCTAACTTCAAGCAAGGAG+AGG + chr4_1:48309451-48309470 None:intergenic 45.0%
GCTCTAACTCTTCCCATGTT+TGG - chr4_1:48309529-48309548 Msa0551950:intron 45.0%
AAACGGGACTGTCCAAACAT+GGG + chr4_1:48309544-48309563 None:intergenic 45.0%
TGACGGGAAGAGCAAAAGAT+TGG + chr4_1:48309581-48309600 None:intergenic 45.0%
! ATCTTTTGCTCTTCCCGTCA+AGG - chr4_1:48309581-48309600 Msa0551950:intron 45.0%
AAGCGACTCAAGTGTTCATG+AGG - chr4_1:48309681-48309700 Msa0551950:intron 45.0%
CAACTGTCCTCAACGGTTTA+AGG + chr4_1:48309740-48309759 None:intergenic 45.0%
! GGTTAGCTGGTTGAAAAGTG+TGG - chr4_1:48309781-48309800 Msa0551950:intron 45.0%
AGACCTAAGCTTGGAGACTA+CGG + chr4_1:48309834-48309853 None:intergenic 45.0%
TAGTCTCCAAGCTTAGGTCT+TGG - chr4_1:48309834-48309853 Msa0551950:intron 45.0%
TCTGCAACTATGGAAGGAGA+AGG + chr4_1:48309870-48309889 None:intergenic 45.0%
GATTCAGTTGAGAGTTGCTC+CGG - chr4_1:48309912-48309931 Msa0551950:intron 45.0%
GGGTGTTCGAGAACAAATAC+CGG + chr4_1:48309934-48309953 None:intergenic 45.0%
GGTATTTGTTCTCGAACACC+CGG - chr4_1:48309933-48309952 Msa0551950:intron 45.0%
AATGAGCTAACCTTCGCAAC+CGG - chr4_1:48309964-48309983 Msa0551950:intron 45.0%
! TGCATTGTGCAGTGCTACTA+AGG + chr4_1:48310083-48310102 None:intergenic 45.0%
TTGCCACTAGGCAGTAGATT+TGG - chr4_1:48302817-48302836 Msa0551950:CDS 45.0%
ACTACAGCCCCTAATTCCTT+AGG - chr4_1:48303033-48303052 Msa0551950:intron 45.0%
!! GTGCGATTTTAACACCCAGA+AGG + chr4_1:48303454-48303473 None:intergenic 45.0%
CTTTGAGTAGTAAGCAGCTC+GGG - chr4_1:48311448-48311467 Msa0551950:intron 45.0%
GCCCTAAGAAACATGCACAA+AGG + chr4_1:48311635-48311654 None:intergenic 45.0%
CCATTGCTTGACATATGGCA+TGG + chr4_1:48311701-48311720 None:intergenic 45.0%
CCATGCCATATGTCAAGCAA+TGG - chr4_1:48311698-48311717 Msa0551950:intron 45.0%
GGACATGATAGCTGCAACTA+TGG + chr4_1:48311798-48311817 None:intergenic 45.0%
!! GATGGGAATTAGCATTGGTG+CGG - chr4_1:48311977-48311996 Msa0551950:intron 45.0%
TCACTGGCACGCAGAAAATA+TGG - chr4_1:48312018-48312037 Msa0551950:intron 45.0%
!! TTTACAAGCTCTAGGGGCAA+TGG - chr4_1:48312046-48312065 Msa0551950:intron 45.0%
!! GAGGATAATGGAGAAGGAGT+AGG + chr4_1:48312078-48312097 None:intergenic 45.0%
!! ATGGTCTTGTGTTCAGAAGG+AGG + chr4_1:48312218-48312237 None:intergenic 45.0%
GACCATGAAAAAGGCCACTT+TGG - chr4_1:48312232-48312251 Msa0551950:intron 45.0%
!! CACCAAAGTGGCCTTTTTCA+TGG + chr4_1:48312237-48312256 None:intergenic 45.0%
TCCAGGTACATGATCTCCAA+AGG + chr4_1:48312315-48312334 None:intergenic 45.0%
! TTGGGGCATACCAGGTATTT+TGG - chr4_1:48312414-48312433 Msa0551950:intron 45.0%
! AGTTGGTACACACCAATGCA+AGG + chr4_1:48312946-48312965 None:intergenic 45.0%
! AGAGTGTCCTCCAAACTAAG+CGG + chr4_1:48312978-48312997 None:intergenic 45.0%
CTTGCACTTCAGATGCTTAG+TGG - chr4_1:48313153-48313172 Msa0551950:five_prime_UTR 45.0%
! ATCCATTGCTGGAGTGGTTT+TGG - chr4_1:48313212-48313231 Msa0551950:five_prime_UTR 45.0%
ATCCAAAACCACTCCAGCAA+TGG + chr4_1:48313217-48313236 None:intergenic 45.0%
ATCACTGCTGTGATAGGCTC+TGG - chr4_1:48302190-48302209 Msa0551950:CDS 50.0%
!! AGGCTCTGGAGTGCTTTCAT+TGG - chr4_1:48302204-48302223 Msa0551950:CDS 50.0%
! CTGGAGTGCTTTCATTGGCT+TGG - chr4_1:48302209-48302228 Msa0551950:CDS 50.0%
GGCAATAGCTCAGCTTGGTT+GGG - chr4_1:48302231-48302250 Msa0551950:CDS 50.0%
ACAGCCCCTAATTCCTTAGG+TGG - chr4_1:48303036-48303055 Msa0551950:intron 50.0%
TCCCTGTTTGAGGGAAATCG+CGG + chr4_1:48303585-48303604 None:intergenic 50.0%
ATCGCAGCACGGCTTGAAAT+TGG - chr4_1:48303626-48303645 Msa0551950:intron 50.0%
TGCGAGGAGTTGTGAATTGG+TGG + chr4_1:48303935-48303954 None:intergenic 50.0%
ATGTAGACCTGCATGTCGAC+TGG + chr4_1:48303979-48303998 None:intergenic 50.0%
! ACCAACTAAGTTTGGGGTGG+GGG + chr4_1:48304392-48304411 None:intergenic 50.0%
GCAACCAACTAAGTTTGGGG+TGG + chr4_1:48304395-48304414 None:intergenic 50.0%
!! CACACTGAGGCAAAAGTGCT+TGG + chr4_1:48304630-48304649 None:intergenic 50.0%
GGAGGGGTGACTTGATTCAA+AGG + chr4_1:48304820-48304839 None:intergenic 50.0%
CAAGGGGATGGCATCTTTGA+AGG + chr4_1:48305118-48305137 None:intergenic 50.0%
TACCACCGAGCAAGATCAAG+GGG + chr4_1:48305134-48305153 None:intergenic 50.0%
! GGGTCTTATGAGAGGTTTGG+AGG + chr4_1:48305241-48305260 None:intergenic 50.0%
! CGTGGGTCTTATGAGAGGTT+TGG + chr4_1:48305244-48305263 None:intergenic 50.0%
! CGATTCGTGGGTCTTATGAG+AGG + chr4_1:48305249-48305268 None:intergenic 50.0%
! TGCATATGGGTCCGATTCGT+GGG + chr4_1:48305261-48305280 None:intergenic 50.0%
! TTGCATATGGGTCCGATTCG+TGG + chr4_1:48305262-48305281 None:intergenic 50.0%
GCGGAGGCTCAATTGCATAT+GGG + chr4_1:48305274-48305293 None:intergenic 50.0%
TGCGGAGGCTCAATTGCATA+TGG + chr4_1:48305275-48305294 None:intergenic 50.0%
AGTTGTGGGTGAACTGTCCT+AGG + chr4_1:48305315-48305334 None:intergenic 50.0%
TAGGACAGTTCACCCACAAC+TGG - chr4_1:48305314-48305333 Msa0551950:intron 50.0%
TGAGACTTCGGACCAGTTGT+GGG + chr4_1:48305329-48305348 None:intergenic 50.0%
ATGAGACTTCGGACCAGTTG+TGG + chr4_1:48305330-48305349 None:intergenic 50.0%
!! TCCTCAAGCTTTGGGTGAAG+AGG - chr4_1:48305379-48305398 Msa0551950:intron 50.0%
TCCTCTTCACCCAAAGCTTG+AGG + chr4_1:48305383-48305402 None:intergenic 50.0%
AAGGAGGGAGTAGTAGCCAA+GGG + chr4_1:48305414-48305433 None:intergenic 50.0%
!! ATCACCGACTCGGTAATGGA+TGG + chr4_1:48305508-48305527 None:intergenic 50.0%
TCCATTACCGAGTCGGTGAT+TGG - chr4_1:48305508-48305527 Msa0551950:intron 50.0%
GCTTCCATGTCCCAATTGTG+TGG - chr4_1:48305603-48305622 Msa0551950:intron 50.0%
TCCCAATTGTGTGGTGTTCC+CGG - chr4_1:48305612-48305631 Msa0551950:intron 50.0%
ACCGGGAACACCACACAATT+GGG + chr4_1:48305616-48305635 None:intergenic 50.0%
AACCGGGAACACCACACAAT+TGG + chr4_1:48305617-48305636 None:intergenic 50.0%
GAAGACTATTGGCCAAGAGG+CGG - chr4_1:48305647-48305666 Msa0551950:intron 50.0%
! TATAGGGTGCCCCTTGATGA+TGG - chr4_1:48305678-48305697 Msa0551950:intron 50.0%
CTGCCTATGCCATCATCAAG+GGG + chr4_1:48305690-48305709 None:intergenic 50.0%
GCTGCCTATGCCATCATCAA+GGG + chr4_1:48305691-48305710 None:intergenic 50.0%
TGCTGCCTATGCCATCATCA+AGG + chr4_1:48305692-48305711 None:intergenic 50.0%
CAAGGCATGGGTGTCTTATG+TGG + chr4_1:48305770-48305789 None:intergenic 50.0%
CACATAAGACACCCATGCCT+TGG - chr4_1:48305768-48305787 Msa0551950:intron 50.0%
TACCTATGCGGAGATGCTGT+CGG + chr4_1:48305797-48305816 None:intergenic 50.0%
GTCCTGGATGCTTACCTATG+CGG + chr4_1:48305809-48305828 None:intergenic 50.0%
!! GGTCGACTTGGAAAAAGTCC+TGG + chr4_1:48305825-48305844 None:intergenic 50.0%
!! GACTTTTTCCAAGTCGACCC+AGG - chr4_1:48305826-48305845 Msa0551950:intron 50.0%
! GGTGGTGATGATCTCGTCAA+AGG - chr4_1:48305858-48305877 Msa0551950:intron 50.0%
GGAGAGATTTGCCATTACGG+AGG + chr4_1:48305887-48305906 None:intergenic 50.0%
!! GATGGCGTTTTCTGGTGGTT+CGG - chr4_1:48306236-48306255 Msa0551950:intron 50.0%
!! GTTTTCTGGTGGTTCGGATG+CGG - chr4_1:48306242-48306261 Msa0551950:intron 50.0%
! AGGGCGTTTGGATTTGCTTG+TGG - chr4_1:48306269-48306288 Msa0551950:intron 50.0%
! GGATTTGCTTGTGGATGGCT+TGG - chr4_1:48306278-48306297 Msa0551950:intron 50.0%
!! GGTTGGTGGCTTTCTTTGAG+CGG - chr4_1:48306301-48306320 Msa0551950:intron 50.0%
!! GTTGGTGGCTTTCTTTGAGC+GGG - chr4_1:48306302-48306321 Msa0551950:intron 50.0%
TGAGCGGGTGTTTCTTTGGT+TGG - chr4_1:48306317-48306336 Msa0551950:intron 50.0%
CTTTGGTTGGAGGCCATTTG+TGG - chr4_1:48306330-48306349 Msa0551950:intron 50.0%
!! GTGCCGCGATTTTGAAGAAC+AGG + chr4_1:48306805-48306824 None:intergenic 50.0%
!! CGGCGCGATTTTGATGAAAC+AGG - chr4_1:48306841-48306860 Msa0551950:intron 50.0%
!! ACGATAAAGAAGCGCTGGGT+GGG + chr4_1:48307122-48307141 None:intergenic 50.0%
CTGAAACGGTACCGTAAAGG+AGG + chr4_1:48307212-48307231 None:intergenic 50.0%
CTAAGGAAGTCTGGTGCACA+AGG + chr4_1:48307260-48307279 None:intergenic 50.0%
CTTGTGCACCAGACTTCCTT+AGG - chr4_1:48307258-48307277 Msa0551950:intron 50.0%
AGGTCCACAGCTTCATCAAC+AGG - chr4_1:48307278-48307297 Msa0551950:intron 50.0%
! CAAGCCTGTTGATGAAGCTG+TGG + chr4_1:48307285-48307304 None:intergenic 50.0%
TTCCCTGTGGGATGCGTAAT+GGG + chr4_1:48307397-48307416 None:intergenic 50.0%
ATTCCCTGTGGGATGCGTAA+TGG + chr4_1:48307398-48307417 None:intergenic 50.0%
CACTGGTCCAGGTGGTAAAT+TGG + chr4_1:48307432-48307451 None:intergenic 50.0%
CAATTTACCACCTGGACCAG+TGG - chr4_1:48307430-48307449 Msa0551950:intron 50.0%
AAGACTACTACCACTGGTCC+AGG + chr4_1:48307443-48307462 None:intergenic 50.0%
ATCTACGGAGGTGGAAAGTG+TGG + chr4_1:48307618-48307637 None:intergenic 50.0%
GTGTTACCGGATTGACGTTG+TGG + chr4_1:48307684-48307703 None:intergenic 50.0%
GTTGAGGTTCCATAAGGAGC+AGG + chr4_1:48307756-48307775 None:intergenic 50.0%
TCAAAGCACGACCAGTTGCA+AGG - chr4_1:48307801-48307820 Msa0551950:intron 50.0%
GGAAGACCTTTCCTTGCAAC+TGG + chr4_1:48307815-48307834 None:intergenic 50.0%
AAGGAAGCCATCAGCTCTTG+AGG + chr4_1:48308857-48308876 None:intergenic 50.0%
CCTCCAAATCTTCACTGAGG+GGG + chr4_1:48309346-48309365 None:intergenic 50.0%
CAAACGGGACTGTCCAAACA+TGG + chr4_1:48309545-48309564 None:intergenic 50.0%
CATGTTTGGACAGTCCCGTT+TGG - chr4_1:48309543-48309562 Msa0551950:intron 50.0%
! CTTTTGTGCTTCAGTCACGG+TGG - chr4_1:48309626-48309645 Msa0551950:intron 50.0%
TGGTTGCACACAAAACTCGC+AGG - chr4_1:48309650-48309669 Msa0551950:intron 50.0%
GCTTGTCCCTTAAACCGTTG+AGG - chr4_1:48309730-48309749 Msa0551950:intron 50.0%
! TCAAAAGCTACGGGGTTAGC+TGG - chr4_1:48309768-48309787 Msa0551950:intron 50.0%
AACCCGTAGTCTCCAAGCTT+AGG - chr4_1:48309828-48309847 Msa0551950:intron 50.0%
GACCTAAGCTTGGAGACTAC+GGG + chr4_1:48309833-48309852 None:intergenic 50.0%
TCTCCAAGCTTAGGTCTTGG+TGG - chr4_1:48309837-48309856 Msa0551950:intron 50.0%
GTACCACCAAGACCTAAGCT+TGG + chr4_1:48309843-48309862 None:intergenic 50.0%
ATTTGTTCTCGAACACCCGG+TGG - chr4_1:48309936-48309955 Msa0551950:intron 50.0%
TTAGCTCATTCCGTTCCACC+GGG + chr4_1:48309954-48309973 None:intergenic 50.0%
GTTAGCTCATTCCGTTCCAC+CGG + chr4_1:48309955-48309974 None:intergenic 50.0%
! AAAGGACTGCTAGAGCACTC+CGG + chr4_1:48309998-48310017 None:intergenic 50.0%
!!! AAGTTTTTGGCGTCGTTGCC+GGG + chr4_1:48310219-48310238 None:intergenic 50.0%
!!! CAAGTTTTTGGCGTCGTTGC+CGG + chr4_1:48310220-48310239 None:intergenic 50.0%
ACAGCCCCTAATTCCTTAGG+TGG - chr4_1:48303036-48303055 Msa0551950:intron 50.0%
TCCCTGTTTGAGGGAAATCG+CGG + chr4_1:48303585-48303604 None:intergenic 50.0%
ATCGCAGCACGGCTTGAAAT+TGG - chr4_1:48303626-48303645 Msa0551950:intron 50.0%
CTGGCACGCAGAAAATATGG+AGG - chr4_1:48312021-48312040 Msa0551950:intron 50.0%
! GCCTTTGGAGATCATGTACC+TGG - chr4_1:48312311-48312330 Msa0551950:intron 50.0%
GCACTTAATTGGGGCATACC+AGG - chr4_1:48312406-48312425 Msa0551950:intron 50.0%
AGAAGTGGAGTGCACGTAAG+TGG - chr4_1:48312878-48312897 Msa0551950:five_prime_UTR 50.0%
TGTTGGATCCATTGCTGGAG+TGG - chr4_1:48313206-48313225 Msa0551950:five_prime_UTR 50.0%
TCCAAGTGCTTCGACGACGA+CGG - chr4_1:48301996-48302015 Msa0551950:CDS 55.0%
GCTTGGGCAATAGCTCAGCT+TGG - chr4_1:48302226-48302245 Msa0551950:CDS 55.0%
GGGCAATAGCTCAGCTTGGT+TGG - chr4_1:48302230-48302249 Msa0551950:CDS 55.0%
TAACACCCAGAAGGCTGCAG+CGG + chr4_1:48303445-48303464 None:intergenic 55.0%
GCACGCCTATATACATGGCG+CGG + chr4_1:48303563-48303582 None:intergenic 55.0%
TCGCGGCACGCCTATATACA+TGG + chr4_1:48303568-48303587 None:intergenic 55.0%
TGCCGCGATTTCCCTCAAAC+AGG - chr4_1:48303580-48303599 Msa0551950:intron 55.0%
GCCGCGATTTCCCTCAAACA+GGG - chr4_1:48303581-48303600 Msa0551950:intron 55.0%
GCGATTTCCCTCAAACAGGG+AGG - chr4_1:48303584-48303603 Msa0551950:intron 55.0%
AGCACGGCTTGAAATTGGCG+TGG - chr4_1:48303631-48303650 Msa0551950:intron 55.0%
GGTTCTACCAGTCGACATGC+AGG - chr4_1:48303969-48303988 Msa0551950:intron 55.0%
AACGGGGCTTAGGTGAAAGG+TGG - chr4_1:48304077-48304096 Msa0551950:intron 55.0%
ACGGGGCTTAGGTGAAAGGT+GGG - chr4_1:48304078-48304097 Msa0551950:intron 55.0%
ACCCCCACCCCAAACTTAGT+TGG - chr4_1:48304388-48304407 Msa0551950:intron 55.0%
GCCATCCCCTTGATCTTGCT+CGG - chr4_1:48305126-48305145 Msa0551950:intron 55.0%
ACCGAGCAAGATCAAGGGGA+TGG + chr4_1:48305130-48305149 None:intergenic 55.0%
ATCCCCTTGATCTTGCTCGG+TGG - chr4_1:48305129-48305148 Msa0551950:intron 55.0%
! AAGAGTATGGGCTGCGCATG+AGG + chr4_1:48305180-48305199 None:intergenic 55.0%
! GTTCTCAGCTGCGTTTGCTG+CGG + chr4_1:48305293-48305312 None:intergenic 55.0%
GCAAACGCAGCTGAGAACCT+AGG - chr4_1:48305295-48305314 Msa0551950:intron 55.0%
! GAAGAGGAGCATAACCCCCT+TGG - chr4_1:48305395-48305414 Msa0551950:intron 55.0%
AGGAGGGAGTAGTAGCCAAG+GGG + chr4_1:48305413-48305432 None:intergenic 55.0%
CAAGGAGGGAGTAGTAGCCA+AGG + chr4_1:48305415-48305434 None:intergenic 55.0%
AGAGAGAGAGGGAGACAGCA+AGG + chr4_1:48305453-48305472 None:intergenic 55.0%
!! GCCAATCACCGACTCGGTAA+TGG + chr4_1:48305512-48305531 None:intergenic 55.0%
! GTGTGAGCAACAGTTGGTGC+CGG + chr4_1:48305569-48305588 None:intergenic 55.0%
!! GTGCCCCTTGATGATGGCAT+AGG - chr4_1:48305684-48305703 Msa0551950:intron 55.0%
GCAGCAAGTACCCTCTTGAG+AGG - chr4_1:48305706-48305725 Msa0551950:intron 55.0%
TACCGACAGCATCTCCGCAT+AGG - chr4_1:48305792-48305811 Msa0551950:intron 55.0%
CTCCGCATAGGTAAGCATCC+AGG - chr4_1:48305804-48305823 Msa0551950:intron 55.0%
TCACCACCATGTGTAGGCCT+GGG + chr4_1:48305846-48305865 None:intergenic 55.0%
ATCACCACCATGTGTAGGCC+TGG + chr4_1:48305847-48305866 None:intergenic 55.0%
!! TCAAGCACCGGAGGAGTGTT+GGG + chr4_1:48305926-48305945 None:intergenic 55.0%
!! TTCAAGCACCGGAGGAGTGT+TGG + chr4_1:48305927-48305946 None:intergenic 55.0%
!! GCTGAATGTTCAAGCACCGG+AGG + chr4_1:48305935-48305954 None:intergenic 55.0%
!! AGCCATGCGTTGAGAGCATC+CGG - chr4_1:48305952-48305971 Msa0551950:intron 55.0%
GCGGGTGTTTCTTTGGTTGG+AGG - chr4_1:48306320-48306339 Msa0551950:intron 55.0%
GTGCTGTAGGGGCAAAATCG+CGG - chr4_1:48306589-48306608 Msa0551950:intron 55.0%
GCACGCCAATTTGCACAGAG+CGG - chr4_1:48306821-48306840 Msa0551950:intron 55.0%
!! ATAAAGAAGCGCTGGGTGGG+AGG + chr4_1:48307119-48307138 None:intergenic 55.0%
!! GACGATAAAGAAGCGCTGGG+TGG + chr4_1:48307123-48307142 None:intergenic 55.0%
GCTGTGGACCTAAGGAAGTC+TGG + chr4_1:48307269-48307288 None:intergenic 55.0%
!! GAGGTACTGTGACGAAGGGT+TGG + chr4_1:48307315-48307334 None:intergenic 55.0%
!!! ATGGGCCGGCTGCTTTTCAA+TGG + chr4_1:48307379-48307398 None:intergenic 55.0%
ACTACTACCACTGGTCCAGG+TGG + chr4_1:48307440-48307459 None:intergenic 55.0%
GCACGACCAGTTGCAAGGAA+AGG - chr4_1:48307806-48307825 Msa0551950:intron 55.0%
GCACCAGGATCCTTCAGCTT+AGG - chr4_1:48308109-48308128 Msa0551950:intron 55.0%
CCACCTAAGCTGAAGGATCC+TGG + chr4_1:48308115-48308134 None:intergenic 55.0%
CCAGGATCCTTCAGCTTAGG+TGG - chr4_1:48308112-48308131 Msa0551950:intron 55.0%
GAAGCTGCCACCTAAGCTGA+AGG + chr4_1:48308122-48308141 None:intergenic 55.0%
TGATCGAGAGCTTCGCCGAA+AGG - chr4_1:48308250-48308269 Msa0551950:intron 55.0%
TTCTTAGATGCTTCCGCGGG+AGG + chr4_1:48309303-48309322 None:intergenic 55.0%
CCCCCTCAGTGAAGATTTGG+AGG - chr4_1:48309343-48309362 Msa0551950:intron 55.0%
GCTCTTCCCGTCAAGGTGAA+AGG - chr4_1:48309588-48309607 Msa0551950:intron 55.0%
!! TACGGGTTAGCCACTCATCG+CGG + chr4_1:48309816-48309835 None:intergenic 55.0%
TTCTCGAACACCCGGTGGAA+CGG - chr4_1:48309941-48309960 Msa0551950:intron 55.0%
TTCGCAACCGGACAGCTTTC+CGG - chr4_1:48309976-48309995 Msa0551950:intron 55.0%
!!! AGTTTTTGGCGTCGTTGCCG+GGG + chr4_1:48310218-48310237 None:intergenic 55.0%
TAACACCCAGAAGGCTGCAG+CGG + chr4_1:48303445-48303464 None:intergenic 55.0%
GCACGCCTATATACATGGCG+CGG + chr4_1:48303563-48303582 None:intergenic 55.0%
TCGCGGCACGCCTATATACA+TGG + chr4_1:48303568-48303587 None:intergenic 55.0%
TGCCGCGATTTCCCTCAAAC+AGG - chr4_1:48303580-48303599 Msa0551950:intron 55.0%
GCCGCGATTTCCCTCAAACA+GGG - chr4_1:48303581-48303600 Msa0551950:intron 55.0%
GCGATTTCCCTCAAACAGGG+AGG - chr4_1:48303584-48303603 Msa0551950:intron 55.0%
AGCACGGCTTGAAATTGGCG+TGG - chr4_1:48303631-48303650 Msa0551950:intron 55.0%
! CTAGGCATCGCCAAAGTTGC+AGG - chr4_1:48311845-48311864 Msa0551950:intron 55.0%
ATTGGTGCGGTGACACAAGC+CGG - chr4_1:48311990-48312009 Msa0551950:intron 55.0%
ACACAAGCCGGAACAGTCAC+TGG - chr4_1:48312002-48312021 Msa0551950:intron 55.0%
! GGCATGGGTTATGCAGCCTT+TGG - chr4_1:48312296-48312315 Msa0551950:intron 55.0%
GCTGCTGTTGGATCCATTGC+TGG - chr4_1:48313201-48313220 Msa0551950:five_prime_UTR 55.0%
! ACCGTCGTCGTCGAAGCACT+TGG + chr4_1:48302000-48302019 None:intergenic 60.0%
GACGGTCGCCTCAAGAGAAC+AGG - chr4_1:48302014-48302033 Msa0551950:CDS 60.0%
GCTCAGCTTGGTTGGGCTGT+TGG - chr4_1:48302238-48302257 Msa0551950:CDS 60.0%
!! CGGCGCGATTTTGATGGGTC+AGG + chr4_1:48303543-48303562 None:intergenic 60.0%
!! TGGCGCGGCGCGATTTTGAT+GGG + chr4_1:48303548-48303567 None:intergenic 60.0%
! ATGGCGCGGCGCGATTTTGA+TGG + chr4_1:48303549-48303568 None:intergenic 60.0%
TCGCGCCGCGCCATGTATAT+AGG - chr4_1:48303555-48303574 Msa0551950:intron 60.0%
GCGAAGTGTACGGCGTTGCT+AGG + chr4_1:48304798-48304817 None:intergenic 60.0%
TCATCCGAGTGTCCAGCTCC+CGG - chr4_1:48305082-48305101 Msa0551950:intron 60.0%
! GTATGGGCTGCGCATGAGGA+GGG + chr4_1:48305176-48305195 None:intergenic 60.0%
! AGTATGGGCTGCGCATGAGG+AGG + chr4_1:48305177-48305196 None:intergenic 60.0%
GGAGGGAGTAGTAGCCAAGG+GGG + chr4_1:48305412-48305431 None:intergenic 60.0%
GCTGTCGGTACCCAAGGCAT+GGG + chr4_1:48305782-48305801 None:intergenic 60.0%
TGCTGTCGGTACCCAAGGCA+TGG + chr4_1:48305783-48305802 None:intergenic 60.0%
GGAGATGCTGTCGGTACCCA+AGG + chr4_1:48305788-48305807 None:intergenic 60.0%
TGTGTAGGCCTGGGTCGACT+TGG + chr4_1:48305837-48305856 None:intergenic 60.0%
AGTCGACCCAGGCCTACACA+TGG - chr4_1:48305837-48305856 Msa0551950:intron 60.0%
GTCCGGATGCTCTCAACGCA+TGG + chr4_1:48305957-48305976 None:intergenic 60.0%
! GCTTGTGGATGGCTTGGGGT+TGG - chr4_1:48306284-48306303 Msa0551950:intron 60.0%
! TGTGGATGGCTTGGGGTTGG+TGG - chr4_1:48306287-48306306 Msa0551950:intron 60.0%
TCGCGGCACGCCAATTTGCA+AGG - chr4_1:48306606-48306625 Msa0551950:intron 60.0%
GCACGCCAATTTGCAAGGCG+CGG - chr4_1:48306611-48306630 Msa0551950:intron 60.0%
TCGCGCTGCGGCCAATTACA+AGG - chr4_1:48306743-48306762 Msa0551950:intron 60.0%
CTGCGGCCAATTACAAGGCG+CGG - chr4_1:48306748-48306767 Msa0551950:intron 60.0%
ATCGCGCCGCGCCTTGTAAT+TGG + chr4_1:48306757-48306776 None:intergenic 60.0%
TCGCGCCGCTCTGTGCAAAT+TGG + chr4_1:48306829-48306848 None:intergenic 60.0%
!! CTGTGGGATGCGTAATGGGC+CGG + chr4_1:48307393-48307412 None:intergenic 60.0%
GGCCCATTACGCATCCCACA+GGG - chr4_1:48307392-48307411 Msa0551950:intron 60.0%
GCTCTTGAGACTACCTCCCG+CGG - chr4_1:48309287-48309306 Msa0551950:intron 60.0%
TGTGCTTCAGTCACGGTGGC+TGG - chr4_1:48309630-48309649 Msa0551950:intron 60.0%
GGTCAGTTGACCGCGATGAG+TGG - chr4_1:48309803-48309822 Msa0551950:intron 60.0%
GGAAAGCTGTCCGGTTGCGA+AGG + chr4_1:48309977-48309996 None:intergenic 60.0%
GAGCACTCCGGAAAGCTGTC+CGG + chr4_1:48309986-48310005 None:intergenic 60.0%
!! CGGCGCGATTTTGATGGGTC+AGG + chr4_1:48303543-48303562 None:intergenic 60.0%
!! TGGCGCGGCGCGATTTTGAT+GGG + chr4_1:48303548-48303567 None:intergenic 60.0%
! ATGGCGCGGCGCGATTTTGA+TGG + chr4_1:48303549-48303568 None:intergenic 60.0%
TCGCGCCGCGCCATGTATAT+AGG - chr4_1:48303555-48303574 Msa0551950:intron 60.0%
CTGCGTGCCAGTGACTGTTC+CGG + chr4_1:48312012-48312031 None:intergenic 60.0%
TCCTCTCCGCTGCAGCCTTC+TGG - chr4_1:48303436-48303455 Msa0551950:exon 65.0%
CCTCTCCGCTGCAGCCTTCT+GGG - chr4_1:48303437-48303456 Msa0551950:exon 65.0%
GACACCGGGAGCTGGACACT+CGG + chr4_1:48305089-48305108 None:intergenic 65.0%
GGATTGAGGACACCGGGAGC+TGG + chr4_1:48305097-48305116 None:intergenic 65.0%
TGGAGGCTCCCGTGAGCACA+TGG + chr4_1:48305224-48305243 None:intergenic 65.0%
! CTCAGCTGCGTTTGCTGCGG+AGG + chr4_1:48305290-48305309 None:intergenic 65.0%
CGACCCAGGCCTACACATGG+TGG - chr4_1:48305840-48305859 Msa0551950:intron 65.0%
! GTGGTTCGGATGCGGCACGA+GGG - chr4_1:48306250-48306269 Msa0551950:intron 65.0%
TCGCGCCGCGCCTTGCAAAT+TGG + chr4_1:48306619-48306638 None:intergenic 65.0%
CGGCCCATTACGCATCCCAC+AGG - chr4_1:48307391-48307410 Msa0551950:intron 65.0%
TCCTCTCCGCTGCAGCCTTC+TGG - chr4_1:48303436-48303455 Msa0551950:exon 65.0%
CCTCTCCGCTGCAGCCTTCT+GGG - chr4_1:48303437-48303456 Msa0551950:exon 65.0%
CCCAGAAGGCTGCAGCGGAG+AGG + chr4_1:48303440-48303459 None:intergenic 70.0%
! GGTGGTTCGGATGCGGCACG+AGG - chr4_1:48306249-48306268 Msa0551950:intron 70.0%
!! GGATGCGGCACGAGGGCGTT+TGG - chr4_1:48306257-48306276 Msa0551950:intron 70.0%
CCCAGAAGGCTGCAGCGGAG+AGG + chr4_1:48303440-48303459 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 48301684 48313486 48301684 ID=Msa0551950;Name=Msa0551950
chr4_1 mRNA 48301684 48313486 48301684 ID=Msa0551950-mRNA-1;Parent=Msa0551950;Name=Msa0551950-mRNA-1;_AED=0.10;_eAED=0.10;_QI=667|1|1|1|0.85|0.75|8|214|317
chr4_1 exon 48301684 48302323 48301684 ID=Msa0551950-mRNA-1:exon:13182;Parent=Msa0551950-mRNA-1
chr4_1 exon 48302743 48302970 48302743 ID=Msa0551950-mRNA-1:exon:13181;Parent=Msa0551950-mRNA-1
chr4_1 exon 48303061 48303218 48303061 ID=Msa0551950-mRNA-1:exon:13180;Parent=Msa0551950-mRNA-1
chr4_1 exon 48303304 48303518 48303304 ID=Msa0551950-mRNA-1:exon:13179;Parent=Msa0551950-mRNA-1
chr4_1 exon 48312594 48312687 48312594 ID=Msa0551950-mRNA-1:exon:13178;Parent=Msa0551950-mRNA-1
chr4_1 exon 48312776 48313009 48312776 ID=Msa0551950-mRNA-1:exon:13177;Parent=Msa0551950-mRNA-1
chr4_1 exon 48313135 48313270 48313135 ID=Msa0551950-mRNA-1:exon:13176;Parent=Msa0551950-mRNA-1
chr4_1 exon 48313357 48313486 48313357 ID=Msa0551950-mRNA-1:exon:13175;Parent=Msa0551950-mRNA-1
chr4_1 five_prime_UTR 48313357 48313486 48313357 ID=Msa0551950-mRNA-1:five_prime_utr;Parent=Msa0551950-mRNA-1
chr4_1 five_prime_UTR 48313135 48313270 48313135 ID=Msa0551950-mRNA-1:five_prime_utr;Parent=Msa0551950-mRNA-1
chr4_1 five_prime_UTR 48312776 48313009 48312776 ID=Msa0551950-mRNA-1:five_prime_utr;Parent=Msa0551950-mRNA-1
chr4_1 five_prime_UTR 48312594 48312687 48312594 ID=Msa0551950-mRNA-1:five_prime_utr;Parent=Msa0551950-mRNA-1
chr4_1 five_prime_UTR 48303446 48303518 48303446 ID=Msa0551950-mRNA-1:five_prime_utr;Parent=Msa0551950-mRNA-1
chr4_1 CDS 48303304 48303445 48303304 ID=Msa0551950-mRNA-1:cds;Parent=Msa0551950-mRNA-1
chr4_1 CDS 48303061 48303218 48303061 ID=Msa0551950-mRNA-1:cds;Parent=Msa0551950-mRNA-1
chr4_1 CDS 48302743 48302970 48302743 ID=Msa0551950-mRNA-1:cds;Parent=Msa0551950-mRNA-1
chr4_1 CDS 48301898 48302323 48301898 ID=Msa0551950-mRNA-1:cds;Parent=Msa0551950-mRNA-1
chr4_1 three_prime_UTR 48301684 48301897 48301684 ID=Msa0551950-mRNA-1:three_prime_utr;Parent=Msa0551950-mRNA-1
Gene Sequence

>Msa0551950

ATGATAACATTTGCTATAGCAGAAGTGATACTTTCCCAAATCCCAGACTTTGATCAAGTATGGTGGCTATCCATAGTTGCAGCTATCATGTCCTTCACTTATTCTACAGTTGGATTAGGTCTAGGCATCGCCAAAGTTGCAGAAAATGGAAAATTTCAAGGAAGCTTGATGGGAATTAGCATTGGTGCGGTGACACAAGCCGGAACAGTCACTGGCACGCAGAAAATATGGAGGAATTTACAAGCTCTAGGGGCAATGGCTTTTTCCTACTCCTTCTCCATTATCCTCATTGAAATTCAAGACACCTTAAAATCTCCTCCTTCTGAACACAAGACCATGAAAAAGGCCACTTTGGTGAGCATCATAGTTACTACAGTGTTCTATTTACTATGTGGTGGCATGGGTTATGCAGCCTTTGGAGATCATGTACCTGGAAATCTTTTGACTGGTTTTGGATTCTATAACCCTTATTGGCTTCTTGACATTGCCAACTTTGCTATTGTTGTGCACTTAATTGGGGCATACCAGGTATTTTCACAGCCCTTTTTTGCATTTGTTGAGAAGTGGAGTGCACGTAAGTGGCCAAAGAATAATTTTGTGACAGCAGAACATGAAATACCTATTCCTTGCATTGGTGTGTACCAACTCAATTTCTTCCGCTTAGTTTGGAGGACACTCTTTGTGCTATTGACAACAATCATAGCCATGCTATTACCATTTTTTAATGATGTGGTTGGAATACTTGGAGCTTTTGGGTTTTGGCCTTTAACAGTTTATTACCCAATAGACATGTATATTTCACAAAAGAAGATTGGAAGATGGACTAAAAAGTGGCTTGCACTTCAGATGCTTAGTGGATGTTGCCTCATCATTTCAATATTAGCTGCTGTTGGATCCATTGCTGGAGTGGTTTTGGATCTCAAAACTTACAAGCCATTCAAAACTAGTTATTAA
Protein sequence

>Msa0551950

MITFAIAEVILSQIPDFDQVWWLSIVAAIMSFTYSTVGLGLGIAKVAENGKFQGSLMGISIGAVTQAGTVTGTQKIWRNLQALGAMAFSYSFSIILIEIQDTLKSPPSEHKTMKKATLVSIIVTTVFYLLCGGMGYAAFGDHVPGNLLTGFGFYNPYWLLDIANFAIVVHLIGAYQVFSQPFFAFVEKWSARKWPKNNFVTAEHEIPIPCIGVYQLNFFRLVWRTLFVLLTTIIAMLLPFFNDVVGILGAFGFWPLTVYYPIDMYISQKKIGRWTKKWLALQMLSGCCLIISILAAVGSIAGVVLDLKTYKPFKTSY*