AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1305750


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1305750 MtrunA17_Chr1g0191301 99.420 345 2 0 1 345 1 345 0.0 709
Msa1305750 MtrunA17_Chr1g0196311 72.174 345 94 2 1 344 17 360 0.0 530
Msa1305750 MtrunA17_Chr7g0259161 70.655 351 95 6 1 344 1 350 0.0 511
Msa1305750 MtrunA17_Chr6g0477251 40.413 339 195 2 6 341 554 888 2.11e-79 259
Msa1305750 MtrunA17_Chr6g0477251 38.757 338 200 2 7 341 1 334 1.76e-73 244
Msa1305750 MtrunA17_Chr6g0477161 39.053 338 198 3 8 341 351 684 2.75e-76 248
Msa1305750 MtrunA17_Chr6g0477161 39.763 337 196 2 9 342 4 336 3.05e-76 247
Msa1305750 MtrunA17_Chr6g0477231 35.522 335 213 1 10 341 2 336 5.36e-75 234
Msa1305750 MtrunA17_Chr6g0477271 38.065 310 176 3 36 340 53 351 8.07e-67 214
Msa1305750 MtrunA17_Chr6g0477241 30.321 343 182 5 5 341 7 298 1.19e-48 165
Msa1305750 MtrunA17_Chr4g0025291 34.843 287 160 5 67 340 43 315 9.32e-47 161
Msa1305750 MtrunA17_Chr7g0214851 32.143 308 171 7 61 341 54 350 2.24e-41 147
Msa1305750 MtrunA17_Chr1g0210121 31.310 313 175 8 53 343 51 345 7.25e-39 141
Msa1305750 MtrunA17_Chr7g0268091 31.142 289 167 7 67 342 45 314 7.15e-38 137
Msa1305750 MtrunA17_Chr3g0133701 29.373 303 169 7 53 344 32 300 8.33e-37 134
Msa1305750 MtrunA17_Chr8g0351211 29.573 328 191 9 38 345 14 321 3.80e-36 133
Msa1305750 MtrunA17_Chr1g0204211 33.223 301 175 9 32 322 37 321 7.02e-36 132
Msa1305750 MtrunA17_Chr7g0235741 31.046 306 182 8 53 345 65 354 3.13e-35 131
Msa1305750 MtrunA17_Chr1g0149271 33.212 274 158 7 38 305 16 270 3.49e-35 130
Msa1305750 MtrunA17_Chr6g0474541 33.884 242 134 7 32 264 47 271 7.84e-35 130
Msa1305750 MtrunA17_Chr8g0351201 30.368 326 183 10 37 342 25 326 2.39e-34 128
Msa1305750 MtrunA17_Chr8g0351171 31.613 310 178 10 25 321 8 296 8.05e-34 127
Msa1305750 MtrunA17_Chr6g0474411 30.065 306 177 9 32 320 22 307 1.27e-33 126
Msa1305750 MtrunA17_Chr1g0204201 32.270 282 163 7 38 305 24 291 1.35e-33 126
Msa1305750 MtrunA17_Chr3g0081521 32.627 236 148 3 97 322 80 314 5.01e-33 125
Msa1305750 MtrunA17_Chr4g0045181 30.132 302 182 8 53 341 33 318 5.63e-33 124
Msa1305750 MtrunA17_Chr6g0474631 33.032 221 126 5 53 264 38 245 3.85e-32 122
Msa1305750 MtrunA17_Chr6g0474471 30.033 303 186 9 31 319 15 305 3.57e-31 120
Msa1305750 MtrunA17_Chr6g0458881 31.660 259 136 4 105 323 160 417 3.07e-30 119
Msa1305750 MtrunA17_Chr4g0045131 27.575 301 186 10 53 340 73 354 1.04e-29 116
Msa1305750 MtrunA17_Chr6g0474491 30.769 234 143 6 37 263 23 244 1.20e-29 115
Msa1305750 MtrunA17_Chr3g0095711 27.832 309 181 9 54 340 80 368 6.35e-29 114
Msa1305750 MtrunA17_Chr7g0228721 30.712 267 136 5 105 323 165 430 7.11e-29 116
Msa1305750 MtrunA17_Chr4g0045121 29.658 263 156 8 53 305 36 279 8.59e-28 110
Msa1305750 MtrunA17_Chr4g0045191 28.617 311 172 11 38 339 31 300 9.59e-28 110
Msa1305750 MtrunA17_Chr1g0205871 28.956 297 169 9 38 314 21 295 4.38e-26 106
Msa1305750 MtrunA17_Chr5g0394251 27.742 310 189 10 25 315 9 302 1.07e-25 105
Msa1305750 MtrunA17_Chr5g0394241 26.403 303 181 9 23 307 12 290 7.77e-25 102
Msa1305750 MtrunA17_Chr7g0233871 31.343 268 149 8 65 315 48 297 8.45e-25 102
Msa1305750 MtrunA17_Chr8g0353951 26.230 305 190 9 54 341 43 329 1.04e-24 102
Msa1305750 MtrunA17_Chr5g0394211 26.780 295 177 9 38 314 56 329 5.86e-24 100
Msa1305750 MtrunA17_Chr1g0205781 31.359 287 151 11 38 305 25 284 1.87e-23 99.0
Msa1305750 MtrunA17_Chr1g0205791 31.641 256 137 8 65 305 46 278 2.23e-23 99.4
Msa1305750 MtrunA17_Chr6g0474611 37.079 89 49 1 183 264 3 91 4.68e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1305750 AT5G27320.1 76.744 344 79 1 1 344 1 343 0.0 566
Msa1305750 AT3G05120.1 75.072 345 85 1 1 344 1 345 0.0 556
Msa1305750 AT3G63010.1 69.477 344 102 3 1 342 1 343 0.0 510
Msa1305750 AT5G23530.1 36.676 349 191 7 1 341 1 327 2.29e-69 220
Msa1305750 AT5G62180.1 33.449 287 172 7 32 308 15 292 1.64e-41 147
Msa1305750 AT1G68620.1 35.433 254 143 5 62 308 57 296 1.81e-41 148
Msa1305750 AT5G06570.1 33.651 315 170 8 47 342 33 327 1.46e-40 145
Msa1305750 AT5G06570.2 33.651 315 170 8 47 342 33 327 1.46e-40 145
Msa1305750 AT5G06570.3 33.651 315 170 8 47 342 48 342 1.82e-40 145
Msa1305750 AT5G06570.4 33.651 315 170 8 47 342 48 342 1.82e-40 145
Msa1305750 AT5G16080.1 32.000 300 166 8 53 336 53 330 2.45e-37 137
Msa1305750 AT1G47480.1 30.420 286 174 6 33 314 16 280 3.97e-36 133
Msa1305750 AT2G03550.1 31.230 317 180 10 39 341 19 311 2.54e-34 128
Msa1305750 AT1G19190.1 32.039 309 172 11 53 344 30 317 3.07e-34 128
Msa1305750 AT2G45600.1 33.585 265 144 7 65 312 39 288 7.63e-34 127
Msa1305750 AT2G45610.1 31.757 296 172 9 32 312 16 296 1.13e-33 127
Msa1305750 AT3G48700.1 33.231 325 163 13 50 343 27 328 1.61e-33 126
Msa1305750 AT3G48690.1 32.234 273 151 7 50 305 27 282 3.65e-33 125
Msa1305750 AT5G14310.1 31.439 264 135 4 105 323 151 413 1.48e-32 126
Msa1305750 AT3G27320.2 32.576 264 131 6 105 323 134 395 1.79e-30 120
Msa1305750 AT3G27320.1 33.080 263 131 5 105 323 166 427 2.76e-30 120
Msa1305750 AT1G49650.1 30.798 263 158 7 53 305 86 334 2.91e-29 116
Msa1305750 AT1G49640.1 29.020 255 165 5 54 304 32 274 9.07e-27 108
Msa1305750 AT1G49660.1 29.502 261 161 5 53 303 30 277 1.40e-26 107

Find 153 sgRNAs with CRISPR-Local

Find 223 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAGATATGGTTCTATTTC+TGG 0.132714 8_3:-69377021 Msa1305750:three_prime_UTR
GTTATATATATAACTAATTT+TGG 0.139303 8_3:-69376945 Msa1305750:three_prime_UTR
GGGAGCTATGGCCATGTTTA+TGG 0.200844 8_3:-69377096 Msa1305750:three_prime_UTR
CACCCACCCCATCAGGAAAT+TGG 0.222970 8_3:-69377157 Msa1305750:three_prime_UTR
ACAGAGAAATGCTCATTATT+TGG 0.229509 8_3:+69377408 None:intergenic
AAATGCTTCTTCTTTCTTGA+TGG 0.233142 8_3:-69379045 Msa1305750:five_prime_UTR
ACGTCTTTGCAAATGTAAAT+AGG 0.243260 8_3:-69376761 Msa1305750:three_prime_UTR
CCATCAAGGCTTCGACCTTT+TGG 0.246635 8_3:+69377579 None:intergenic
TTGTCGTCTCGGTGAATTAT+AGG 0.247260 8_3:-69377959 Msa1305750:CDS
ATGGGTGGAAAGCTGTTAAA+TGG 0.260029 8_3:-69377899 Msa1305750:CDS
CTTCAGTTGTCCTCCTTGTT+TGG 0.278009 8_3:-69376790 Msa1305750:three_prime_UTR
AAGAGTCTTGTGGTGGTTGC+TGG 0.278599 8_3:-69377543 Msa1305750:CDS
TAATGTTACCTTTGAATCAT+TGG 0.295142 8_3:+69378923 None:intergenic
TGATCTCTGTCTTCCCCTTC+AGG 0.298031 8_3:+69377624 None:intergenic
TGCTGGTTTGGATCTTGTTC+AGG 0.302371 8_3:-69377526 Msa1305750:CDS
TCTCCTCCTTCATTCACCTT+TGG 0.302485 8_3:-69379074 Msa1305750:five_prime_UTR
ATTGTATGCTAACTTGAAAT+TGG 0.306162 8_3:+69378304 None:intergenic
TATCATATAAGTTCCTAATC+AGG 0.325409 8_3:+69377243 None:intergenic
AATGTTACCTTTGAATCATT+GGG 0.326815 8_3:+69378924 None:intergenic
TCTTGTGGTGGTTGCTGGTT+TGG 0.332790 8_3:-69377538 Msa1305750:CDS
TCCAGCTTTCTCAAGTCCTT+TGG 0.334783 8_3:+69377485 None:intergenic
TCCACAGGATTCGCATTTGC+TGG 0.346221 8_3:+69378218 None:intergenic
AGCATCGGACTCTGGGATTC+CGG 0.346427 8_3:-69377772 Msa1305750:CDS
AGGACTTTGCTCCCCTGATT+AGG 0.354879 8_3:-69377256 Msa1305750:three_prime_UTR
GCAACCACCACAAGACTCTT+AGG 0.357754 8_3:+69377546 None:intergenic
ATAGGCGTGCGCCTGAAAAT+AGG 0.363489 8_3:-69377941 Msa1305750:CDS
CTTGTTCAGGATTGGCAATT+GGG 0.363782 8_3:-69377513 Msa1305750:CDS
TCTTGTTCAGGATTGGCAAT+TGG 0.368427 8_3:-69377514 Msa1305750:CDS
TGGCTATGTTGCGGTGTGAT+TGG 0.392294 8_3:-69379177 Msa1305750:five_prime_UTR
ATACTGCTAAACCCTTTGTT+TGG 0.396562 8_3:-69377738 Msa1305750:CDS
ATTAATTGTGTCTGTGAGAT+TGG 0.399827 8_3:-69377221 Msa1305750:three_prime_UTR
GACTCTGGGATTCCGGTGTT+GGG 0.401673 8_3:-69377765 Msa1305750:CDS
GAAGATATGGTTCTATTTCT+GGG 0.401998 8_3:-69377020 Msa1305750:three_prime_UTR
TTCTCGAGCAAGCCACGGTT+GGG 0.404625 8_3:-69377443 Msa1305750:CDS
GGACTCTGGGATTCCGGTGT+TGG 0.405337 8_3:-69377766 Msa1305750:CDS
GGAAGAACCTCAGCAGTAAC+AGG 0.409700 8_3:+69378083 None:intergenic
GTTTGGATCTTGTTCAGGAT+TGG 0.415765 8_3:-69377521 Msa1305750:CDS
AGAAAATGCTAAAGTAAAAC+AGG 0.416926 8_3:+69379136 None:intergenic
GAATCCGAAAAGCGTCTTGA+TGG 0.417426 8_3:-69377699 Msa1305750:CDS
TGAAAGATAGAGACTGGTAT+TGG 0.418998 8_3:-69377659 Msa1305750:CDS
GGAGCTATGGCCATGTTTAT+GGG 0.420489 8_3:-69377095 Msa1305750:three_prime_UTR
TGTTGTTCTTCTCCCTCAAC+AGG 0.421393 8_3:+69378131 None:intergenic
CATCACGCGTGTAACCCTTT+TGG 0.421489 8_3:-69377603 Msa1305750:CDS
CGAATCTACCGTCCTGTTGA+GGG 0.426280 8_3:-69378143 Msa1305750:CDS
TCTGGAGCACCCACCCCATC+AGG 0.427760 8_3:-69377164 Msa1305750:three_prime_UTR
CCAAAAGGTCGAAGCCTTGA+TGG 0.429491 8_3:-69377579 Msa1305750:CDS
TGCTAAACCCTTTGTTTGGC+GGG 0.429653 8_3:-69377734 Msa1305750:CDS
GTGGGTAATCACAACTTTAG+TGG 0.434751 8_3:+69377070 None:intergenic
GCATTGAAAGCATCGGACTC+TGG 0.434852 8_3:-69377780 Msa1305750:CDS
ATTTGGATTGTGGTTGGTTG+TGG 0.435688 8_3:-69379197 Msa1305750:five_prime_UTR
AGTTGGTTACTTCCAGCCAT+TGG 0.441895 8_3:+69378951 None:intergenic
CAGTGGGGCTTGCCCTTGTA+TGG 0.443406 8_3:-69376973 Msa1305750:three_prime_UTR
AACAAAATCAATCCAATGGC+TGG 0.444127 8_3:-69378963 Msa1305750:exon
TTGTCCTCCTTGTTTGGCAA+TGG 0.447399 8_3:-69376784 Msa1305750:three_prime_UTR
ATCAAAACCCACATGTTCAA+TGG 0.451446 8_3:+69378329 None:intergenic
ACCCACCCCATCAGGAAATT+GGG 0.453005 8_3:-69377156 Msa1305750:three_prime_UTR
CCTGTTGTCATGTTCTTCCA+CGG 0.459630 8_3:-69378062 Msa1305750:CDS
TATCCTTGCGCTTATGAAGA+TGG 0.468068 8_3:-69377918 Msa1305750:CDS
ATCATATAAGTTCCTAATCA+GGG 0.469230 8_3:+69377244 None:intergenic
TTTCTCGAGCAAGCCACGGT+TGG 0.476045 8_3:-69377444 Msa1305750:CDS
TGGGTGGAAAGCTGTTAAAT+GGG 0.477103 8_3:-69377898 Msa1305750:CDS
CTAAAGTAAAACAGGAATGA+AGG 0.478351 8_3:+69379144 None:intergenic
CAAGGGCAAGCCCCACTGAT+TGG 0.481696 8_3:+69376978 None:intergenic
GAGTGGTGAAGGATAAGAAA+AGG 0.484696 8_3:+69379103 None:intergenic
CTACATGGTTGGTGATAGCT+CGG 0.486021 8_3:-69377826 Msa1305750:CDS
TTGTAATGCTGTTGTCGTCT+CGG 0.487442 8_3:-69377970 Msa1305750:CDS
GGAGAAGAGAAGAGTGGTGA+AGG 0.487809 8_3:+69379092 None:intergenic
CTTTCTTCCCCGCCAAACAA+AGG 0.487810 8_3:+69377726 None:intergenic
CACCCAATTTCCTGATGGGG+TGG 0.488269 8_3:+69377154 None:intergenic
CTGCTAAACCCTTTGTTTGG+CGG 0.491910 8_3:-69377735 Msa1305750:CDS
GTAGATTCGAGTAAGGAGAT+TGG 0.497470 8_3:+69378157 None:intergenic
CATTGAAAGCATCGGACTCT+GGG 0.497517 8_3:-69377779 Msa1305750:CDS
CCCACTGATTGGCCATCAAA+AGG 0.497804 8_3:+69376989 None:intergenic
TGGAACTTTCAACCGTGACT+TGG 0.499887 8_3:-69378264 Msa1305750:CDS
CCGTGGAAGAACATGACAAC+AGG 0.502089 8_3:+69378062 None:intergenic
TATCCAACCTTGTGTGGCAT+AGG 0.503411 8_3:+69376657 None:intergenic
GCCAAAGGACTTGAGAAAGC+TGG 0.509171 8_3:-69377486 Msa1305750:CDS
TTTCTTCCCCGCCAAACAAA+GGG 0.509175 8_3:+69377727 None:intergenic
TGCCTTTCCTAAGAGTCTTG+TGG 0.514282 8_3:-69377553 Msa1305750:CDS
GGGTGTTGCGGATAGGTGAA+AGG 0.515509 8_3:-69377136 Msa1305750:three_prime_UTR
AATCTTCTCCGTCGTCCTGA+TGG 0.518337 8_3:-69378284 Msa1305750:CDS
CGCAACACCCAATTTCCTGA+TGG 0.518629 8_3:+69377149 None:intergenic
TATATAACACTTGCCATACA+AGG 0.518680 8_3:+69376960 None:intergenic
CAAAAGGTCGAAGCCTTGAT+GGG 0.521272 8_3:-69377578 Msa1305750:CDS
CTTCCTATGCCACACAAGGT+TGG 0.527827 8_3:-69376660 Msa1305750:three_prime_UTR
TTGAATCATTGGGGTTGAGT+TGG 0.528438 8_3:+69378934 None:intergenic
TGATACATTGTGTCGTCGAT+TGG 0.529626 8_3:-69378000 Msa1305750:CDS
AATGGGTTAACTCTAGAACT+TGG 0.530294 8_3:-69377881 Msa1305750:CDS
ACAGGAATGAAGGGAAAGAA+TGG 0.532589 8_3:+69379154 None:intergenic
AACGGTGTGTATTTGGATTG+TGG 0.541471 8_3:-69379207 None:intergenic
TCGAATCTACCGTCCTGTTG+AGG 0.542489 8_3:-69378144 Msa1305750:CDS
GAAGATCCAAAGGTGAATGA+AGG 0.544391 8_3:+69379068 None:intergenic
TCACGGTTGAAAGTTCCATC+AGG 0.545176 8_3:+69378269 None:intergenic
ACTTGGCAGAGTTTCTTGAT+CGG 0.546431 8_3:-69378247 Msa1305750:CDS
ATCCTTGCGCTTATGAAGAT+GGG 0.546497 8_3:-69377917 Msa1305750:CDS
GCAACACCCAATTTCCTGAT+GGG 0.551741 8_3:+69377150 None:intergenic
AAAGCATCAATCATATATGT+TGG 0.556799 8_3:-69376909 Msa1305750:three_prime_UTR
GGAAATTGGGTGTTGCGGAT+AGG 0.557101 8_3:-69377143 Msa1305750:three_prime_UTR
AATCCGAAAAGCGTCTTGAT+GGG 0.557814 8_3:-69377698 Msa1305750:CDS
TCAGAGTGAAAGATAGAGAC+TGG 0.557918 8_3:-69377665 Msa1305750:CDS
AGCAAATATCCAACCTTGTG+TGG 0.558731 8_3:+69376651 None:intergenic
GTGTGTATTTGGATTGTGGT+TGG 0.566404 8_3:-69379203 None:intergenic
GAAGGAGGAGAAGAGAAGAG+TGG 0.568713 8_3:+69379086 None:intergenic
TAAAGTAAAACAGGAATGAA+GGG 0.568741 8_3:+69379145 None:intergenic
AGCAGTATATTTCCCAACAC+CGG 0.572967 8_3:+69377753 None:intergenic
CAGGACGGTAGATTCGAGTA+AGG 0.573555 8_3:+69378150 None:intergenic
TAGGAAAGGCAACCCCATCA+AGG 0.574933 8_3:+69377565 None:intergenic
CACCCATCTTCATAAGCGCA+AGG 0.575641 8_3:+69377915 None:intergenic
AAGGTTCATATCTACATGGT+TGG 0.580511 8_3:-69377837 Msa1305750:CDS
TGAGCATTTCTCTGTTGTCA+TGG 0.580679 8_3:-69377400 Msa1305750:CDS
CTTTCCTAAGAGTCTTGTGG+TGG 0.585467 8_3:-69377550 Msa1305750:CDS
AAGACGTCCATTGCCAAACA+AGG 0.587397 8_3:+69376777 None:intergenic
ATGGTTGGTGATAGCTCGGG+CGG 0.594503 8_3:-69377822 Msa1305750:CDS
TACATGGTTGGTGATAGCTC+GGG 0.594607 8_3:-69377825 Msa1305750:CDS
ACATTGTGTCGTCGATTGGT+TGG 0.596982 8_3:-69377996 Msa1305750:CDS
AGAAGCATTTGAAGATCCAA+AGG 0.597630 8_3:+69379058 None:intergenic
CAGCAGTAACAGGCTTCTCA+AGG 0.598120 8_3:+69378093 None:intergenic
TGGTGGTTCCATTGAACATG+TGG 0.598890 8_3:-69378337 Msa1305750:CDS
CATCAGGAAATTGGGTGTTG+CGG 0.599996 8_3:-69377148 Msa1305750:three_prime_UTR
TGAGAAGCCTGTTACTGCTG+AGG 0.600623 8_3:-69378090 Msa1305750:CDS
ACTCAACCCCAATGATTCAA+AGG 0.601718 8_3:-69378931 Msa1305750:intron
ATGTTACCTTTGAATCATTG+GGG 0.602888 8_3:+69378925 None:intergenic
ACTCAACAAAATCAATCCAA+TGG 0.603090 8_3:-69378967 Msa1305750:exon
GGGTCTTCCTATGCCACACA+AGG 0.603642 8_3:-69376664 Msa1305750:three_prime_UTR
GCTATTTCTCGAGCAAGCCA+CGG 0.605537 8_3:-69377448 Msa1305750:CDS
CCATGTTGCATTGAAAGCAT+CGG 0.608422 8_3:-69377787 Msa1305750:CDS
GCTAAACCCTTTGTTTGGCG+GGG 0.608927 8_3:-69377733 Msa1305750:CDS
AAAGAGAAAACACCATCCAC+AGG 0.610297 8_3:+69378203 None:intergenic
ACCCAATTTCCTGATGGGGT+GGG 0.611604 8_3:+69377155 None:intergenic
CAAGAAACTCTGCCAAGTCA+CGG 0.617005 8_3:+69378252 None:intergenic
TGAAAGTTCCATCAGGACGA+CGG 0.623383 8_3:+69378276 None:intergenic
CAACACCCAATTTCCTGATG+GGG 0.624348 8_3:+69377151 None:intergenic
TAGCAAGGTTCATATCTACA+TGG 0.626488 8_3:-69377841 Msa1305750:CDS
TTTAGTGGTTCCCATAAACA+TGG 0.629664 8_3:+69377085 None:intergenic
GTTCTTCTCCCTCAACAGGA+CGG 0.631361 8_3:+69378135 None:intergenic
TGGCAATTGGGATATGCCAA+AGG 0.633591 8_3:-69377501 Msa1305750:CDS
CTTGCGCTTATGAAGATGGG+TGG 0.634175 8_3:-69377914 Msa1305750:CDS
TCCAGCAAATGCGAATCCTG+TGG 0.635598 8_3:-69378219 Msa1305750:CDS
CACCACAAGACTCTTAGGAA+AGG 0.635838 8_3:+69377551 None:intergenic
GATCCAAAGGTGAATGAAGG+AGG 0.637419 8_3:+69379071 None:intergenic
CCGATGCTTTCAATGCAACA+TGG 0.638442 8_3:+69377787 None:intergenic
GGTTGGTTGTGGCTATGTTG+CGG 0.645031 8_3:-69379186 Msa1305750:five_prime_UTR
GGTGGTTCCATTGAACATGT+GGG 0.653078 8_3:-69378336 Msa1305750:CDS
TCATATAAGTTCCTAATCAG+GGG 0.655979 8_3:+69377245 None:intergenic
AAAAGGTCGAAGCCTTGATG+GGG 0.659766 8_3:-69377577 Msa1305750:CDS
ATATAACACTTGCCATACAA+GGG 0.663659 8_3:+69376961 None:intergenic
TGGTTGGTGATAGCTCGGGC+GGG 0.665839 8_3:-69377821 Msa1305750:CDS
CTATATAGAGAAAAGATGAA+CGG 0.667855 8_3:+69376833 None:intergenic
GTTGTCATGTTCTTCCACGG+TGG 0.676583 8_3:-69378059 Msa1305750:CDS
GCAAATGCGAATCCTGTGGA+TGG 0.677631 8_3:-69378215 Msa1305750:CDS
ACGTCCATTGCCAAACAAGG+AGG 0.708889 8_3:+69376780 None:intergenic
TAGCAAGTAAAACCCAACCG+TGG 0.774514 8_3:+69377431 None:intergenic
AATGTGCAAAACTTCCACCG+TGG 0.777602 8_3:+69378045 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCATTTTTTAATATTGTTA+TGG - chr8_3:69377177-69377196 Msa1305750:three_prime_UTR 10.0%
!!! GTTATATATATAACTAATTT+TGG - chr8_3:69378840-69378859 Msa1305750:intron 10.0%
!!! TTTTGTTTCATACAAATTTA+AGG - chr8_3:69376962-69376981 Msa1305750:three_prime_UTR 15.0%
!! TCTTAATTTCTCTAAATTAA+TGG - chr8_3:69377304-69377323 Msa1305750:three_prime_UTR 15.0%
!! CTTAATTTCTCTAAATTAAT+GGG - chr8_3:69377305-69377324 Msa1305750:three_prime_UTR 15.0%
!!! TTTGGTTTAAAATTTCATTT+TGG - chr8_3:69377328-69377347 Msa1305750:three_prime_UTR 15.0%
!! ATTAAAAACAAGTTAATAAG+TGG + chr8_3:69378507-69378526 None:intergenic 15.0%
!!! TATTAACTTGTTTTTAATGT+AGG - chr8_3:69378509-69378528 Msa1305750:intron 15.0%
!! ACAAAAGAACAAAAAATCAA+AGG + chr8_3:69377020-69377039 None:intergenic 20.0%
!!! ATCAGTGTAATAAATAGTTT+TGG - chr8_3:69377150-69377169 Msa1305750:three_prime_UTR 20.0%
!!! TCAGTGTAATAAATAGTTTT+GGG - chr8_3:69377151-69377170 Msa1305750:three_prime_UTR 20.0%
!!! GATGTAATAGTTTTTTATGT+TGG - chr8_3:69377210-69377229 Msa1305750:three_prime_UTR 20.0%
!!! TAATAGTTTTTTATGTTGGT+TGG - chr8_3:69377214-69377233 Msa1305750:three_prime_UTR 20.0%
!!! TATAGCTATATTATGTTTTC+TGG - chr8_3:69378603-69378622 Msa1305750:intron 20.0%
!!! GTATTGTGTTTTTTTATGTA+TGG - chr8_3:69379083-69379102 Msa1305750:five_prime_UTR 20.0%
!!! TATGGATAAGATATTTTTCA+GGG - chr8_3:69379101-69379120 Msa1305750:five_prime_UTR 20.0%
! TAAAGTAAAACAGGAATGAA+GGG + chr8_3:69376643-69376662 None:intergenic 25.0%
! AGAAAATGCTAAAGTAAAAC+AGG + chr8_3:69376652-69376671 None:intergenic 25.0%
! AATGTTACCTTTGAATCATT+GGG + chr8_3:69376864-69376883 None:intergenic 25.0%
! TAATGTTACCTTTGAATCAT+TGG + chr8_3:69376865-69376884 None:intergenic 25.0%
! TTAGACTTTGTCAATGTTTA+GGG - chr8_3:69377261-69377280 Msa1305750:three_prime_UTR 25.0%
!!! TTTCTCTAAATTAATGGGTT+TGG - chr8_3:69377310-69377329 Msa1305750:three_prime_UTR 25.0%
! TAGATAAAATTTGATGCAGA+TGG - chr8_3:69377428-69377447 Msa1305750:CDS 25.0%
! ATTGTATGCTAACTTGAAAT+TGG + chr8_3:69377484-69377503 None:intergenic 25.0%
!! CTTTTGATGTTATTGTTGAT+CGG - chr8_3:69377601-69377620 Msa1305750:CDS 25.0%
!! TTTTGATGTTATTGTTGATC+GGG - chr8_3:69377602-69377621 Msa1305750:CDS 25.0%
! ATCATATAAGTTCCTAATCA+GGG + chr8_3:69378544-69378563 None:intergenic 25.0%
! TATCATATAAGTTCCTAATC+AGG + chr8_3:69378545-69378564 None:intergenic 25.0%
!!! AAAGGTTTTTAGGACAAAAA+AGG - chr8_3:69378667-69378686 Msa1305750:intron 25.0%
!!! AAGGTTTTTAGGACAAAAAA+GGG - chr8_3:69378668-69378687 Msa1305750:intron 25.0%
!!! ACTAATTTTGGAACTATGAT+AGG - chr8_3:69378852-69378871 Msa1305750:intron 25.0%
!!! CTAATTTTGGAACTATGATA+GGG - chr8_3:69378853-69378872 Msa1305750:intron 25.0%
!! AAAGCATCAATCATATATGT+TGG - chr8_3:69378876-69378895 Msa1305750:intron 25.0%
! CTATATAGAGAAAAGATGAA+CGG + chr8_3:69378955-69378974 None:intergenic 25.0%
!!! TCTTTTACTTTTAGCTGTAA+TGG - chr8_3:69379052-69379071 Msa1305750:five_prime_UTR 25.0%
!! GTATGGATAAGATATTTTTC+AGG - chr8_3:69379100-69379119 Msa1305750:five_prime_UTR 25.0%
CTAAAGTAAAACAGGAATGA+AGG + chr8_3:69376644-69376663 None:intergenic 30.0%
AAATGCTTCTTCTTTCTTGA+TGG - chr8_3:69376740-69376759 Msa1305750:three_prime_UTR 30.0%
! TGATTTTGTTGAGTGTAGAT+CGG + chr8_3:69376812-69376831 None:intergenic 30.0%
ACTCAACAAAATCAATCCAA+TGG - chr8_3:69376818-69376837 Msa1305750:three_prime_UTR 30.0%
ATGTTACCTTTGAATCATTG+GGG + chr8_3:69376863-69376882 None:intergenic 30.0%
ATACTATACTATGTTGCTGT+TGG - chr8_3:69376920-69376939 Msa1305750:three_prime_UTR 30.0%
GGAAAGAAATAAACATCGTA+CGG + chr8_3:69376990-69377009 None:intergenic 30.0%
CAAAAAATCAAAGGCGAAAA+AGG + chr8_3:69377011-69377030 None:intergenic 30.0%
!! GTTTAGTCTTTTTCTTTCGT+TGG - chr8_3:69377038-69377057 Msa1305750:three_prime_UTR 30.0%
!!! AGTTTTTTATGTTGGTTGGT+TGG - chr8_3:69377218-69377237 Msa1305750:three_prime_UTR 30.0%
! ACAAAGTCTAAGATAGAAAC+AGG + chr8_3:69377252-69377271 None:intergenic 30.0%
CTTAGACTTTGTCAATGTTT+AGG - chr8_3:69377260-69377279 Msa1305750:three_prime_UTR 30.0%
! ATGTTTAGGGTTTGGTTATT+TGG - chr8_3:69377274-69377293 Msa1305750:three_prime_UTR 30.0%
AATCAGAAACTAGCTACAAA+AGG + chr8_3:69377368-69377387 None:intergenic 30.0%
ATAAAATTTGATGCAGATGG+TGG - chr8_3:69377431-69377450 Msa1305750:CDS 30.0%
ACAGAGAAATGCTCATTATT+TGG + chr8_3:69378380-69378399 None:intergenic 30.0%
! TTAACTTTTGCCAAACAAGA+AGG - chr8_3:69378447-69378466 Msa1305750:intron 30.0%
! TAACTTTTGCCAAACAAGAA+GGG - chr8_3:69378448-69378467 Msa1305750:intron 30.0%
TCATATAAGTTCCTAATCAG+GGG + chr8_3:69378543-69378562 None:intergenic 30.0%
ATTAATTGTGTCTGTGAGAT+TGG - chr8_3:69378564-69378583 Msa1305750:intron 30.0%
!!! AGGTTTTTAGGACAAAAAAG+GGG - chr8_3:69378669-69378688 Msa1305750:intron 30.0%
! GAAGATATGGTTCTATTTCT+GGG - chr8_3:69378765-69378784 Msa1305750:intron 30.0%
ATATAACACTTGCCATACAA+GGG + chr8_3:69378827-69378846 None:intergenic 30.0%
TATATAACACTTGCCATACA+AGG + chr8_3:69378828-69378847 None:intergenic 30.0%
ACGTCTTTGCAAATGTAAAT+AGG - chr8_3:69379024-69379043 Msa1305750:five_prime_UTR 30.0%
!! TTACTTTTAGCTGTAATGGT+AGG - chr8_3:69379056-69379075 Msa1305750:five_prime_UTR 30.0%
!! TACTTTTAGCTGTAATGGTA+GGG - chr8_3:69379057-69379076 Msa1305750:five_prime_UTR 30.0%
!! AGAAGCATTTGAAGATCCAA+AGG + chr8_3:69376730-69376749 None:intergenic 35.0%
TGAGTGTAGATCGGTAAAAA+AGG + chr8_3:69376803-69376822 None:intergenic 35.0%
AACAAAATCAATCCAATGGC+TGG - chr8_3:69376822-69376841 Msa1305750:three_prime_UTR 35.0%
!! GTCTTTTTCTTTCGTTGGTT+TGG - chr8_3:69377043-69377062 Msa1305750:three_prime_UTR 35.0%
!!! TTTTCTTTCGTTGGTTTGGT+TGG - chr8_3:69377047-69377066 Msa1305750:three_prime_UTR 35.0%
! CTTTGTCAATGTTTAGGGTT+TGG - chr8_3:69377266-69377285 Msa1305750:three_prime_UTR 35.0%
! TAGGGTTTGGTTATTTGGTT+TGG - chr8_3:69377279-69377298 Msa1305750:three_prime_UTR 35.0%
ATCAAAACCCACATGTTCAA+TGG + chr8_3:69377459-69377478 None:intergenic 35.0%
! TGGAAGTTTTGCACATTCTT+CGG - chr8_3:69377746-69377765 Msa1305750:CDS 35.0%
!! AATGGGTTAACTCTAGAACT+TGG - chr8_3:69377904-69377923 Msa1305750:CDS 35.0%
GCAGAGTAAAAAAGATAGCA+AGG - chr8_3:69377929-69377948 Msa1305750:CDS 35.0%
TAGCAAGGTTCATATCTACA+TGG - chr8_3:69377944-69377963 Msa1305750:CDS 35.0%
AAGGTTCATATCTACATGGT+TGG - chr8_3:69377948-69377967 Msa1305750:CDS 35.0%
ATACTGCTAAACCCTTTGTT+TGG - chr8_3:69378047-69378066 Msa1305750:CDS 35.0%
TGAAAGATAGAGACTGGTAT+TGG - chr8_3:69378126-69378145 Msa1305750:CDS 35.0%
! AACTTTTGCCAAACAAGAAG+GGG - chr8_3:69378449-69378468 Msa1305750:intron 35.0%
!!! GGGTTTTAGAAAGATTGTGT+AGG - chr8_3:69378470-69378489 Msa1305750:intron 35.0%
TTTAGTGGTTCCCATAAACA+TGG + chr8_3:69378703-69378722 None:intergenic 35.0%
!! TTTTGGCTGAAAGTCAAAGT+GGG + chr8_3:69378736-69378755 None:intergenic 35.0%
!!! TTTTTGGCTGAAAGTCAAAG+TGG + chr8_3:69378737-69378756 None:intergenic 35.0%
! TTTGACTTTCAGCCAAAAAG+AGG - chr8_3:69378738-69378757 Msa1305750:intron 35.0%
! ATATCTTCCTCTCCTCTTTT+TGG + chr8_3:69378753-69378772 None:intergenic 35.0%
AAAAAGAGGAGAGGAAGATA+TGG - chr8_3:69378752-69378771 Msa1305750:intron 35.0%
! GGAAGATATGGTTCTATTTC+TGG - chr8_3:69378764-69378783 Msa1305750:intron 35.0%
ACAGGAATGAAGGGAAAGAA+TGG + chr8_3:69376634-69376653 None:intergenic 40.0%
GAGTGGTGAAGGATAAGAAA+AGG + chr8_3:69376685-69376704 None:intergenic 40.0%
GAAGATCCAAAGGTGAATGA+AGG + chr8_3:69376720-69376739 None:intergenic 40.0%
TTGAATCATTGGGGTTGAGT+TGG + chr8_3:69376854-69376873 None:intergenic 40.0%
ACTCAACCCCAATGATTCAA+AGG - chr8_3:69376854-69376873 Msa1305750:three_prime_UTR 40.0%
ACTTGGCAGAGTTTCTTGAT+CGG - chr8_3:69377538-69377557 Msa1305750:CDS 40.0%
AAAGAGAAAACACCATCCAC+AGG + chr8_3:69377585-69377604 None:intergenic 40.0%
GTAGATTCGAGTAAGGAGAT+TGG + chr8_3:69377631-69377650 None:intergenic 40.0%
TGATACATTGTGTCGTCGAT+TGG - chr8_3:69377785-69377804 Msa1305750:CDS 40.0%
TTGTAATGCTGTTGTCGTCT+CGG - chr8_3:69377815-69377834 Msa1305750:CDS 40.0%
TTGTCGTCTCGGTGAATTAT+AGG - chr8_3:69377826-69377845 Msa1305750:CDS 40.0%
TATCCTTGCGCTTATGAAGA+TGG - chr8_3:69377867-69377886 Msa1305750:CDS 40.0%
ATCCTTGCGCTTATGAAGAT+GGG - chr8_3:69377868-69377887 Msa1305750:CDS 40.0%
ATGGGTGGAAAGCTGTTAAA+TGG - chr8_3:69377886-69377905 Msa1305750:CDS 40.0%
TGGGTGGAAAGCTGTTAAAT+GGG - chr8_3:69377887-69377906 Msa1305750:CDS 40.0%
! CCATGTTGCATTGAAAGCAT+CGG - chr8_3:69377998-69378017 Msa1305750:CDS 40.0%
AGCAGTATATTTCCCAACAC+CGG + chr8_3:69378035-69378054 None:intergenic 40.0%
!! AATCCGAAAAGCGTCTTGAT+GGG - chr8_3:69378087-69378106 Msa1305750:CDS 40.0%
TCAGAGTGAAAGATAGAGAC+TGG - chr8_3:69378120-69378139 Msa1305750:CDS 40.0%
! TGTAACCCTTTTGGTCCAAA+AGG - chr8_3:69378191-69378210 Msa1305750:CDS 40.0%
! TTCGACCTTTTGGACCAAAA+GGG + chr8_3:69378199-69378218 None:intergenic 40.0%
GTTTGGATCTTGTTCAGGAT+TGG - chr8_3:69378264-69378283 Msa1305750:CDS 40.0%
! TCTTGTTCAGGATTGGCAAT+TGG - chr8_3:69378271-69378290 Msa1305750:CDS 40.0%
! CTTGTTCAGGATTGGCAATT+GGG - chr8_3:69378272-69378291 Msa1305750:CDS 40.0%
TGAGCATTTCTCTGTTGTCA+TGG - chr8_3:69378385-69378404 Msa1305750:intron 40.0%
! ACTTTTGCCAAACAAGAAGG+GGG - chr8_3:69378450-69378469 Msa1305750:intron 40.0%
! TCTAAAACCCCCTTCTTGTT+TGG + chr8_3:69378460-69378479 None:intergenic 40.0%
! CGGATAGGTGAAAGGTTTTT+AGG - chr8_3:69378657-69378676 Msa1305750:intron 40.0%
GTGGGTAATCACAACTTTAG+TGG + chr8_3:69378718-69378737 None:intergenic 40.0%
AGCAAATATCCAACCTTGTG+TGG + chr8_3:69379137-69379156 None:intergenic 40.0%
TCTCCTCCTTCATTCACCTT+TGG - chr8_3:69376711-69376730 Msa1305750:three_prime_UTR 45.0%
GATCCAAAGGTGAATGAAGG+AGG + chr8_3:69376717-69376736 None:intergenic 45.0%
AGTTGGTTACTTCCAGCCAT+TGG + chr8_3:69376837-69376856 None:intergenic 45.0%
TGGTGGTTCCATTGAACATG+TGG - chr8_3:69377448-69377467 Msa1305750:CDS 45.0%
GGTGGTTCCATTGAACATGT+GGG - chr8_3:69377449-69377468 Msa1305750:CDS 45.0%
TGAAAGTTCCATCAGGACGA+CGG + chr8_3:69377512-69377531 None:intergenic 45.0%
TCACGGTTGAAAGTTCCATC+AGG + chr8_3:69377519-69377538 None:intergenic 45.0%
TGGAACTTTCAACCGTGACT+TGG - chr8_3:69377521-69377540 Msa1305750:CDS 45.0%
CAAGAAACTCTGCCAAGTCA+CGG + chr8_3:69377536-69377555 None:intergenic 45.0%
TGTTGTTCTTCTCCCTCAAC+AGG + chr8_3:69377657-69377676 None:intergenic 45.0%
CCTGTTGTCATGTTCTTCCA+CGG - chr8_3:69377723-69377742 Msa1305750:CDS 45.0%
AATGTGCAAAACTTCCACCG+TGG + chr8_3:69377743-69377762 None:intergenic 45.0%
! ACATTGTGTCGTCGATTGGT+TGG - chr8_3:69377789-69377808 Msa1305750:CDS 45.0%
! GCGCAAGGATACCTATTTTC+AGG + chr8_3:69377858-69377877 None:intergenic 45.0%
!! CTACATGGTTGGTGATAGCT+CGG - chr8_3:69377959-69377978 Msa1305750:CDS 45.0%
!! TACATGGTTGGTGATAGCTC+GGG - chr8_3:69377960-69377979 Msa1305750:CDS 45.0%
CCGATGCTTTCAATGCAACA+TGG + chr8_3:69378001-69378020 None:intergenic 45.0%
!! CATTGAAAGCATCGGACTCT+GGG - chr8_3:69378006-69378025 Msa1305750:CDS 45.0%
! CTGCTAAACCCTTTGTTTGG+CGG - chr8_3:69378050-69378069 Msa1305750:CDS 45.0%
! TGCTAAACCCTTTGTTTGGC+GGG - chr8_3:69378051-69378070 Msa1305750:CDS 45.0%
TTTCTTCCCCGCCAAACAAA+GGG + chr8_3:69378061-69378080 None:intergenic 45.0%
!! GAATCCGAAAAGCGTCTTGA+TGG - chr8_3:69378086-69378105 Msa1305750:CDS 45.0%
! TCTCCCATCAAGACGCTTTT+CGG + chr8_3:69378093-69378112 None:intergenic 45.0%
! TGGAGAGCTTTTCTTCCTGA+AGG - chr8_3:69378146-69378165 Msa1305750:CDS 45.0%
! GGAGAGCTTTTCTTCCTGAA+GGG - chr8_3:69378147-69378166 Msa1305750:CDS 45.0%
! GAGAGCTTTTCTTCCTGAAG+GGG - chr8_3:69378148-69378167 Msa1305750:CDS 45.0%
! CTTCGACCTTTTGGACCAAA+AGG + chr8_3:69378200-69378219 None:intergenic 45.0%
CAAAAGGTCGAAGCCTTGAT+GGG - chr8_3:69378207-69378226 Msa1305750:CDS 45.0%
AAAAGGTCGAAGCCTTGATG+GGG - chr8_3:69378208-69378227 Msa1305750:CDS 45.0%
TGCCTTTCCTAAGAGTCTTG+TGG - chr8_3:69378232-69378251 Msa1305750:CDS 45.0%
CACCACAAGACTCTTAGGAA+AGG + chr8_3:69378237-69378256 None:intergenic 45.0%
! CTTTCCTAAGAGTCTTGTGG+TGG - chr8_3:69378235-69378254 Msa1305750:CDS 45.0%
!! TGCTGGTTTGGATCTTGTTC+AGG - chr8_3:69378259-69378278 Msa1305750:CDS 45.0%
TGGCAATTGGGATATGCCAA+AGG - chr8_3:69378284-69378303 Msa1305750:CDS 45.0%
TCCAGCTTTCTCAAGTCCTT+TGG + chr8_3:69378303-69378322 None:intergenic 45.0%
TAGCAAGTAAAACCCAACCG+TGG + chr8_3:69378357-69378376 None:intergenic 45.0%
CAACACCCAATTTCCTGATG+GGG + chr8_3:69378637-69378656 None:intergenic 45.0%
GCAACACCCAATTTCCTGAT+GGG + chr8_3:69378638-69378657 None:intergenic 45.0%
! CATCAGGAAATTGGGTGTTG+CGG - chr8_3:69378637-69378656 Msa1305750:intron 45.0%
AGGACAAAAAAGGGGAGCTA+TGG - chr8_3:69378677-69378696 Msa1305750:intron 45.0%
GGAGCTATGGCCATGTTTAT+GGG - chr8_3:69378690-69378709 Msa1305750:intron 45.0%
CTTTCAGCCAAAAAGAGGAG+AGG - chr8_3:69378743-69378762 Msa1305750:intron 45.0%
! TGGGCTTTCTGACCTTTTGA+TGG - chr8_3:69378784-69378803 Msa1305750:intron 45.0%
!! ACCTTTTGATGGCCAATCAG+TGG - chr8_3:69378795-69378814 Msa1305750:intron 45.0%
!! CCTTTTGATGGCCAATCAGT+GGG - chr8_3:69378796-69378815 Msa1305750:intron 45.0%
!! CTTTTGATGGCCAATCAGTG+GGG - chr8_3:69378797-69378816 Msa1305750:intron 45.0%
CTTCAGTTGTCCTCCTTGTT+TGG - chr8_3:69378995-69379014 Msa1305750:five_prime_UTR 45.0%
! TTGTCCTCCTTGTTTGGCAA+TGG - chr8_3:69379001-69379020 Msa1305750:five_prime_UTR 45.0%
AAGACGTCCATTGCCAAACA+AGG + chr8_3:69379011-69379030 None:intergenic 45.0%
TATCCAACCTTGTGTGGCAT+AGG + chr8_3:69379131-69379150 None:intergenic 45.0%
! GGTTGGTTGTGGCTATGTTG+CGG - chr8_3:69376599-69376618 Msa1305750:three_prime_UTR 50.0%
TGGCTATGTTGCGGTGTGAT+TGG - chr8_3:69376608-69376627 Msa1305750:three_prime_UTR 50.0%
GGAGAAGAGAAGAGTGGTGA+AGG + chr8_3:69376696-69376715 None:intergenic 50.0%
GAAGGAGGAGAAGAGAAGAG+TGG + chr8_3:69376702-69376721 None:intergenic 50.0%
AATCTTCTCCGTCGTCCTGA+TGG - chr8_3:69377501-69377520 Msa1305750:CDS 50.0%
TCCAGCAAATGCGAATCCTG+TGG - chr8_3:69377566-69377585 Msa1305750:CDS 50.0%
TCCACAGGATTCGCATTTGC+TGG + chr8_3:69377570-69377589 None:intergenic 50.0%
GCAAATGCGAATCCTGTGGA+TGG - chr8_3:69377570-69377589 Msa1305750:CDS 50.0%
CAGGACGGTAGATTCGAGTA+AGG + chr8_3:69377638-69377657 None:intergenic 50.0%
TCGAATCTACCGTCCTGTTG+AGG - chr8_3:69377641-69377660 Msa1305750:CDS 50.0%
CGAATCTACCGTCCTGTTGA+GGG - chr8_3:69377642-69377661 Msa1305750:CDS 50.0%
GTTCTTCTCCCTCAACAGGA+CGG + chr8_3:69377653-69377672 None:intergenic 50.0%
CAGCAGTAACAGGCTTCTCA+AGG + chr8_3:69377695-69377714 None:intergenic 50.0%
TGAGAAGCCTGTTACTGCTG+AGG - chr8_3:69377695-69377714 Msa1305750:CDS 50.0%
GGAAGAACCTCAGCAGTAAC+AGG + chr8_3:69377705-69377724 None:intergenic 50.0%
CCGTGGAAGAACATGACAAC+AGG + chr8_3:69377726-69377745 None:intergenic 50.0%
GTTGTCATGTTCTTCCACGG+TGG - chr8_3:69377726-69377745 Msa1305750:CDS 50.0%
ATAGGCGTGCGCCTGAAAAT+AGG - chr8_3:69377844-69377863 Msa1305750:CDS 50.0%
CACCCATCTTCATAAGCGCA+AGG + chr8_3:69377873-69377892 None:intergenic 50.0%
CTTGCGCTTATGAAGATGGG+TGG - chr8_3:69377871-69377890 Msa1305750:CDS 50.0%
!! GCATTGAAAGCATCGGACTC+TGG - chr8_3:69378005-69378024 Msa1305750:CDS 50.0%
! GCTAAACCCTTTGTTTGGCG+GGG - chr8_3:69378052-69378071 Msa1305750:CDS 50.0%
CTTTCTTCCCCGCCAAACAA+AGG + chr8_3:69378062-69378081 None:intergenic 50.0%
TGATCTCTGTCTTCCCCTTC+AGG + chr8_3:69378164-69378183 None:intergenic 50.0%
! CATCACGCGTGTAACCCTTT+TGG - chr8_3:69378182-69378201 Msa1305750:CDS 50.0%
! CCATCAAGGCTTCGACCTTT+TGG + chr8_3:69378209-69378228 None:intergenic 50.0%
CCAAAAGGTCGAAGCCTTGA+TGG - chr8_3:69378206-69378225 Msa1305750:CDS 50.0%
TAGGAAAGGCAACCCCATCA+AGG + chr8_3:69378223-69378242 None:intergenic 50.0%
GCAACCACCACAAGACTCTT+AGG + chr8_3:69378242-69378261 None:intergenic 50.0%
! AAGAGTCTTGTGGTGGTTGC+TGG - chr8_3:69378242-69378261 Msa1305750:CDS 50.0%
! TCTTGTGGTGGTTGCTGGTT+TGG - chr8_3:69378247-69378266 Msa1305750:CDS 50.0%
GCCAAAGGACTTGAGAAAGC+TGG - chr8_3:69378299-69378318 Msa1305750:CDS 50.0%
!! GCTATTTCTCGAGCAAGCCA+CGG - chr8_3:69378337-69378356 Msa1305750:CDS 50.0%
AGGACTTTGCTCCCCTGATT+AGG - chr8_3:69378529-69378548 Msa1305750:intron 50.0%
ACCCACCCCATCAGGAAATT+GGG - chr8_3:69378629-69378648 Msa1305750:intron 50.0%
ACCCAATTTCCTGATGGGGT+GGG + chr8_3:69378633-69378652 None:intergenic 50.0%
CGCAACACCCAATTTCCTGA+TGG + chr8_3:69378639-69378658 None:intergenic 50.0%
! GGAAATTGGGTGTTGCGGAT+AGG - chr8_3:69378642-69378661 Msa1305750:intron 50.0%
GGGAGCTATGGCCATGTTTA+TGG - chr8_3:69378689-69378708 Msa1305750:intron 50.0%
! CCCACTGATTGGCCATCAAA+AGG + chr8_3:69378799-69378818 None:intergenic 50.0%
ACGTCCATTGCCAAACAAGG+AGG + chr8_3:69379008-69379027 None:intergenic 50.0%
CTTCCTATGCCACACAAGGT+TGG - chr8_3:69379125-69379144 Msa1305750:five_prime_UTR 50.0%
!! ATGGTTGGTGATAGCTCGGG+CGG - chr8_3:69377963-69377982 Msa1305750:CDS 55.0%
!! AGCATCGGACTCTGGGATTC+CGG - chr8_3:69378013-69378032 Msa1305750:CDS 55.0%
!! GACTCTGGGATTCCGGTGTT+GGG - chr8_3:69378020-69378039 Msa1305750:CDS 55.0%
TTTCTCGAGCAAGCCACGGT+TGG - chr8_3:69378341-69378360 Msa1305750:CDS 55.0%
TTCTCGAGCAAGCCACGGTT+GGG - chr8_3:69378342-69378361 Msa1305750:intron 55.0%
CACCCACCCCATCAGGAAAT+TGG - chr8_3:69378628-69378647 Msa1305750:intron 55.0%
CACCCAATTTCCTGATGGGG+TGG + chr8_3:69378634-69378653 None:intergenic 55.0%
! GGGTGTTGCGGATAGGTGAA+AGG - chr8_3:69378649-69378668 Msa1305750:intron 55.0%
GGGTCTTCCTATGCCACACA+AGG - chr8_3:69379121-69379140 Msa1305750:five_prime_UTR 55.0%
!! TGGTTGGTGATAGCTCGGGC+GGG - chr8_3:69377964-69377983 Msa1305750:CDS 60.0%
!! GGACTCTGGGATTCCGGTGT+TGG - chr8_3:69378019-69378038 Msa1305750:CDS 60.0%
CAAGGGCAAGCCCCACTGAT+TGG + chr8_3:69378810-69378829 None:intergenic 60.0%
CAGTGGGGCTTGCCCTTGTA+TGG - chr8_3:69378812-69378831 Msa1305750:intron 60.0%
! TCTGGAGCACCCACCCCATC+AGG - chr8_3:69378621-69378640 Msa1305750:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 69376590 69379217 69376590 ID=Msa1305750;Name=Msa1305750
chr8_3 mRNA 69376590 69379217 69376590 ID=Msa1305750-mRNA-1;Parent=Msa1305750;Name=Msa1305750-mRNA-1;_AED=0.00;_eAED=0.00;_QI=247|1|1|1|1|1|2|772|345
chr8_3 exon 69376590 69378360 69376590 ID=Msa1305750-mRNA-1:exon:21490;Parent=Msa1305750-mRNA-1
chr8_3 exon 69378932 69379217 69378932 ID=Msa1305750-mRNA-1:exon:21489;Parent=Msa1305750-mRNA-1
chr8_3 five_prime_UTR 69378971 69379217 69378971 ID=Msa1305750-mRNA-1:five_prime_utr;Parent=Msa1305750-mRNA-1
chr8_3 CDS 69378932 69378970 69378932 ID=Msa1305750-mRNA-1:cds;Parent=Msa1305750-mRNA-1
chr8_3 CDS 69377362 69378360 69377362 ID=Msa1305750-mRNA-1:cds;Parent=Msa1305750-mRNA-1
chr8_3 three_prime_UTR 69376590 69377361 69376590 ID=Msa1305750-mRNA-1:three_prime_utr;Parent=Msa1305750-mRNA-1
Gene Sequence

>Msa1305750

ATGGCTGGAAGTAACCAACTCAACCCCAATGATTCAAAGATGGTGGTTCCATTGAACATGTGGGTTTTGATCTCCAATTTCAAGTTAGCATACAATCTTCTCCGTCGTCCTGATGGAACTTTCAACCGTGACTTGGCAGAGTTTCTTGATCGGAAAGTTCCAGCAAATGCGAATCCTGTGGATGGTGTTTTCTCTTTTGATGTTATTGTTGATCGGGAAACCAATCTCCTTACTCGAATCTACCGTCCTGTTGAGGGAGAAGAACAACATGTGAACATTGTTGACCTTGAGAAGCCTGTTACTGCTGAGGTTCTTCCTGTTGTCATGTTCTTCCACGGTGGAAGTTTTGCACATTCTTCGGCTAACAGTGCTATTTATGATACATTGTGTCGTCGATTGGTTGGTATTTGTAATGCTGTTGTCGTCTCGGTGAATTATAGGCGTGCGCCTGAAAATAGGTATCCTTGCGCTTATGAAGATGGGTGGAAAGCTGTTAAATGGGTTAACTCTAGAACTTGGCTGCAGAGTAAAAAAGATAGCAAGGTTCATATCTACATGGTTGGTGATAGCTCGGGCGGGAACATTGTGCACCATGTTGCATTGAAAGCATCGGACTCTGGGATTCCGGTGTTGGGAAATATACTGCTAAACCCTTTGTTTGGCGGGGAAGAAAGAACAGAATCCGAAAAGCGTCTTGATGGGAGATATTTTGTCAGAGTGAAAGATAGAGACTGGTATTGGAGAGCTTTTCTTCCTGAAGGGGAAGACAGAGATCATCACGCGTGTAACCCTTTTGGTCCAAAAGGTCGAAGCCTTGATGGGGTTGCCTTTCCTAAGAGTCTTGTGGTGGTTGCTGGTTTGGATCTTGTTCAGGATTGGCAATTGGGATATGCCAAAGGACTTGAGAAAGCTGGACAAAATGTGAAGTTGCTATTTCTCGAGCAAGCCACGGTTGGGTTTTACTTGCTACCAAATAATGAGCATTTCTCTGTTGTCATGGATGAGATAAAACATTTTGTCAACTCTGACTGTTCATAG

Protein sequence

>Msa1305750

MAGSNQLNPNDSKMVVPLNMWVLISNFKLAYNLLRRPDGTFNRDLAEFLDRKVPANANPVDGVFSFDVIVDRETNLLTRIYRPVEGEEQHVNIVDLEKPVTAEVLPVVMFFHGGSFAHSSANSAIYDTLCRRLVGICNAVVVSVNYRRAPENRYPCAYEDGWKAVKWVNSRTWLQSKKDSKVHIYMVGDSSGGNIVHHVALKASDSGIPVLGNILLNPLFGGEERTESEKRLDGRYFVRVKDRDWYWRAFLPEGEDRDHHACNPFGPKGRSLDGVAFPKSLVVVAGLDLVQDWQLGYAKGLEKAGQNVKLLFLEQATVGFYLLPNNEHFSVVMDEIKHFVNSDCS*