Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759060 | KAE8010018.1 | 56.410 | 78 | 30 | 2 | 24 | 97 | 102 | 179 | 6.17e-16 | 80.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759060 | sp|Q9M2E8|HDG1_ARATH | 53.623 | 69 | 28 | 2 | 24 | 88 | 173 | 241 | 7.83e-16 | 74.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759060 | A0A5N6QU34 | 56.410 | 78 | 30 | 2 | 24 | 97 | 102 | 179 | 2.95e-16 | 80.5 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa0759060 | 0.845771 | 3.297862e-59 | -8.615850e-47 |
| Msa0050390 | Msa0759060 | 0.805319 | 1.413685e-49 | -8.615850e-47 |
| Msa0067990 | Msa0759060 | 0.802377 | 5.774474e-49 | -8.615850e-47 |
| Msa0078650 | Msa0759060 | 0.818999 | 1.462094e-52 | -8.615850e-47 |
| Msa0101810 | Msa0759060 | -0.818854 | 1.577418e-52 | -8.615850e-47 |
| Msa0110970 | Msa0759060 | 0.823785 | 1.149153e-53 | -8.615850e-47 |
| Msa0663390 | Msa0759060 | 0.802256 | 6.116045e-49 | -8.615850e-47 |
| Msa0669320 | Msa0759060 | 0.816049 | 6.756159e-52 | -8.615850e-47 |
| Msa0691380 | Msa0759060 | 0.808928 | 2.434096e-50 | -8.615850e-47 |
| Msa0737570 | Msa0759060 | 0.801485 | 8.805756e-49 | -8.615850e-47 |
| Msa0745790 | Msa0759060 | 0.803259 | 3.796314e-49 | -8.615850e-47 |
| Msa0759060 | Msa0800380 | 0.817671 | 2.921963e-52 | -8.615850e-47 |
| Msa0759060 | Msa0824660 | 0.819794 | 9.629857e-53 | -8.615850e-47 |
| Msa0759060 | Msa0827040 | 0.816496 | 5.367891e-52 | -8.615850e-47 |
| Msa0759060 | Msa0828560 | 0.816994 | 4.149493e-52 | -8.615850e-47 |
| Msa0759060 | Msa0838380 | 0.936558 | 1.432581e-97 | -8.615850e-47 |
| Msa0759060 | Msa0856920 | 0.805949 | 1.042493e-49 | -8.615850e-47 |
| Msa0759060 | Msa0861870 | 0.810544 | 1.093371e-50 | -8.615850e-47 |
| Msa0759060 | Msa0861930 | 0.814024 | 1.902091e-51 | -8.615850e-47 |
| Msa0759060 | Msa0869100 | 0.808386 | 3.176494e-50 | -8.615850e-47 |
| Msa0759060 | Msa0871270 | 0.808712 | 2.706335e-50 | -8.615850e-47 |
| Msa0759060 | Msa0880140 | 0.846259 | 2.430521e-59 | -8.615850e-47 |
| Msa0759060 | Msa0896750 | 0.815455 | 9.165617e-52 | -8.615850e-47 |
| Msa0759060 | Msa0908050 | 0.809074 | 2.264279e-50 | -8.615850e-47 |
| Msa0759060 | Msa0923330 | 0.804428 | 2.170638e-49 | -8.615850e-47 |
| Msa0759060 | Msa0933310 | 0.811212 | 7.837826e-51 | -8.615850e-47 |
| Msa0759060 | Msa0971090 | 0.820653 | 6.123484e-53 | -8.615850e-47 |
| Msa0759060 | Msa1045200 | 0.812923 | 3.321118e-51 | -8.615850e-47 |
| Msa0759060 | Msa1070000 | 0.800350 | 1.501896e-48 | -8.615850e-47 |
| Msa0759060 | Msa1137570 | 0.812642 | 3.826646e-51 | -8.615850e-47 |
| Msa0759060 | Msa1142020 | 0.800294 | 1.541967e-48 | -8.615850e-47 |
| Msa0759060 | Msa1147900 | 0.804189 | 2.434353e-49 | -8.615850e-47 |
| Msa0759060 | Msa1151910 | 0.851098 | 1.106836e-60 | -8.615850e-47 |
| Msa0759060 | Msa1193290 | 0.812014 | 5.247209e-51 | -8.615850e-47 |
| Msa0759060 | Msa1199570 | 0.806367 | 8.514695e-50 | -8.615850e-47 |
| Msa0759060 | Msa1203250 | 0.800769 | 1.233588e-48 | -8.615850e-47 |
| Msa0759060 | Msa1207270 | 0.801517 | 8.675674e-49 | -8.615850e-47 |
| Msa0759060 | Msa1209460 | 0.801509 | 8.706131e-49 | -8.615850e-47 |
| Msa0759060 | Msa1238930 | 0.800431 | 1.445910e-48 | -8.615850e-47 |
| Msa0759060 | Msa1303250 | 0.812262 | 4.631935e-51 | -8.615850e-47 |
| Msa0759060 | Msa1306850 | 0.810082 | 1.375833e-50 | -8.615850e-47 |
| Msa0759060 | Msa1308380 | 0.818065 | 2.381262e-52 | -8.615850e-47 |
| Msa0759060 | Msa1313150 | 0.803897 | 2.799941e-49 | -8.615850e-47 |
| Msa0759060 | Msa1314340 | 0.810680 | 1.022040e-50 | -8.615850e-47 |
| Msa0759060 | Msa1328710 | 0.804866 | 1.758752e-49 | -8.615850e-47 |
| Msa0759060 | Msa1336570 | 0.818221 | 2.194883e-52 | -8.615850e-47 |
| Msa0759060 | Msa1346370 | 0.817920 | 2.567579e-52 | -8.615850e-47 |
| Msa0759060 | Msa1348490 | 0.815707 | 8.052892e-52 | -8.615850e-47 |
| Msa0759060 | Msa1359040 | 0.800181 | 1.625990e-48 | -8.615850e-47 |
| Msa0759060 | Msa1374550 | 0.803736 | 3.023213e-49 | -8.615850e-47 |
| Msa0759060 | Msa1392260 | 0.802511 | 5.419800e-49 | -8.615850e-47 |
| Msa0759060 | Msa1416150 | 0.813013 | 3.172570e-51 | -8.615850e-47 |
| Msa0759060 | Msa1461300 | 0.817838 | 2.679341e-52 | -8.615850e-47 |
| Msa0759060 | Msa1465300 | 0.811398 | 7.143535e-51 | -8.615850e-47 |
| Msa0126370 | Msa0759060 | 0.824275 | 8.814347e-54 | -8.615850e-47 |
| Msa0140780 | Msa0759060 | 0.815075 | 1.113159e-51 | -8.615850e-47 |
| Msa0157290 | Msa0759060 | 0.846052 | 2.766520e-59 | -8.615850e-47 |
| Msa0171290 | Msa0759060 | 0.812621 | 3.866300e-51 | -8.615850e-47 |
| Msa0193920 | Msa0759060 | 0.813170 | 2.931020e-51 | -8.615850e-47 |
| Msa0200260 | Msa0759060 | 0.831341 | 1.764029e-55 | -8.615850e-47 |
| Msa0212990 | Msa0759060 | 0.810981 | 8.794879e-51 | -8.615850e-47 |
| Msa0215320 | Msa0759060 | -0.800067 | 1.714576e-48 | -8.615850e-47 |
| Msa0216240 | Msa0759060 | 0.800854 | 1.185555e-48 | -8.615850e-47 |
| Msa0237230 | Msa0759060 | 0.803201 | 3.902683e-49 | -8.615850e-47 |
| Msa0366240 | Msa0759060 | 0.807448 | 5.029044e-50 | -8.615850e-47 |
| Msa0376350 | Msa0759060 | 0.803130 | 4.037217e-49 | -8.615850e-47 |
| Msa0388960 | Msa0759060 | 0.801182 | 1.015675e-48 | -8.615850e-47 |
| Msa0393080 | Msa0759060 | 0.806055 | 9.906377e-50 | -8.615850e-47 |
| Msa0395790 | Msa0759060 | 0.806399 | 8.382498e-50 | -8.615850e-47 |
| Msa0410500 | Msa0759060 | 0.820042 | 8.452659e-53 | -8.615850e-47 |
| Msa0410650 | Msa0759060 | 0.805485 | 1.304826e-49 | -8.615850e-47 |
| Msa0419820 | Msa0759060 | 0.805978 | 1.028165e-49 | -8.615850e-47 |
| Msa0440750 | Msa0759060 | 0.817109 | 3.909702e-52 | -8.615850e-47 |
| Msa0475790 | Msa0759060 | 0.801056 | 1.077961e-48 | -8.615850e-47 |
| Msa0481530 | Msa0759060 | 0.804738 | 1.869893e-49 | -8.615850e-47 |
| Msa0243100 | Msa0759060 | 0.831915 | 1.273151e-55 | -8.615850e-47 |
| Msa0261340 | Msa0759060 | 0.810037 | 1.406834e-50 | -8.615850e-47 |
| Msa0271530 | Msa0759060 | 0.802553 | 5.312682e-49 | -8.615850e-47 |
| Msa0274360 | Msa0759060 | 0.820410 | 6.959809e-53 | -8.615850e-47 |
| Msa0283520 | Msa0759060 | 0.800499 | 1.400744e-48 | -8.615850e-47 |
| Msa0287650 | Msa0759060 | 0.837029 | 6.615365e-57 | -8.615850e-47 |
| Msa0300690 | Msa0759060 | 0.819128 | 1.366790e-52 | -8.615850e-47 |
| Msa0314210 | Msa0759060 | 0.816352 | 5.779448e-52 | -8.615850e-47 |
| Msa0330340 | Msa0759060 | 0.806380 | 8.462722e-50 | -8.615850e-47 |
| Msa0336040 | Msa0759060 | -0.802916 | 4.471128e-49 | -8.615850e-47 |
| Msa0339250 | Msa0759060 | 0.818830 | 1.597318e-52 | -8.615850e-47 |
| Msa0345970 | Msa0759060 | 0.804496 | 2.100642e-49 | -8.615850e-47 |
| Msa0351100 | Msa0759060 | 0.800242 | 1.580274e-48 | -8.615850e-47 |
| Msa0359030 | Msa0759060 | 0.811410 | 7.100537e-51 | -8.615850e-47 |
| Msa0488560 | Msa0759060 | 0.809629 | 1.721655e-50 | -8.615850e-47 |
| Msa0498650 | Msa0759060 | 0.807008 | 6.233028e-50 | -8.615850e-47 |
| Msa0507680 | Msa0759060 | 0.806010 | 1.012369e-49 | -8.615850e-47 |
| Msa0515010 | Msa0759060 | 0.802108 | 6.558987e-49 | -8.615850e-47 |
| Msa0569500 | Msa0759060 | 0.808520 | 2.974518e-50 | -8.615850e-47 |
| Msa0574890 | Msa0759060 | 0.820947 | 5.240286e-53 | -8.615850e-47 |
| Msa0585560 | Msa0759060 | 0.801325 | 9.496901e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759060 | MtrunA17_Chr7g0246631 | 60.870 | 69 | 23 | 2 | 24 | 88 | 154 | 222 | 1.35e-17 | 76.3 |
| Msa0759060 | MtrunA17_Chr8g0350321 | 56.522 | 69 | 26 | 2 | 24 | 88 | 178 | 246 | 2.87e-16 | 72.8 |
| Msa0759060 | MtrunA17_Chr1g0203671 | 40.580 | 69 | 37 | 1 | 24 | 88 | 158 | 226 | 1.95e-12 | 61.6 |
| Msa0759060 | MtrunA17_Chr6g0472471 | 44.286 | 70 | 33 | 2 | 24 | 89 | 132 | 199 | 2.48e-12 | 61.2 |
| Msa0759060 | MtrunA17_Chr2g0322731 | 34.091 | 88 | 52 | 3 | 2 | 88 | 149 | 231 | 4.78e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759060 | AT3G61150.1 | 53.623 | 69 | 28 | 2 | 24 | 88 | 173 | 241 | 7.96e-17 | 74.7 |
| Msa0759060 | AT4G00730.2 | 52.174 | 69 | 29 | 2 | 24 | 88 | 197 | 265 | 2.64e-16 | 73.2 |
| Msa0759060 | AT4G00730.1 | 52.174 | 69 | 29 | 2 | 24 | 88 | 197 | 265 | 7.75e-16 | 71.6 |
| Msa0759060 | AT1G05230.3 | 36.232 | 69 | 40 | 1 | 24 | 88 | 127 | 195 | 7.98e-11 | 57.4 |
| Msa0759060 | AT1G05230.8 | 36.232 | 69 | 40 | 1 | 24 | 88 | 127 | 195 | 7.99e-11 | 57.4 |
| Msa0759060 | AT1G05230.4 | 36.232 | 69 | 40 | 1 | 24 | 88 | 127 | 195 | 7.99e-11 | 57.4 |
| Msa0759060 | AT1G05230.9 | 36.232 | 69 | 40 | 1 | 24 | 88 | 127 | 195 | 7.99e-11 | 57.4 |
| Msa0759060 | AT1G05230.10 | 36.232 | 69 | 40 | 1 | 24 | 88 | 127 | 195 | 7.99e-11 | 57.4 |
| Msa0759060 | AT1G05230.7 | 36.232 | 69 | 40 | 1 | 24 | 88 | 127 | 195 | 7.99e-11 | 57.4 |
| Msa0759060 | AT1G05230.11 | 36.232 | 69 | 40 | 1 | 24 | 88 | 127 | 195 | 7.99e-11 | 57.4 |
| Msa0759060 | AT1G05230.2 | 36.232 | 69 | 40 | 1 | 24 | 88 | 127 | 195 | 7.99e-11 | 57.4 |
| Msa0759060 | AT1G05230.6 | 36.232 | 69 | 40 | 1 | 24 | 88 | 127 | 195 | 7.99e-11 | 57.4 |
| Msa0759060 | AT1G05230.5 | 36.232 | 69 | 40 | 1 | 24 | 88 | 127 | 195 | 7.99e-11 | 57.4 |
| Msa0759060 | AT1G05230.1 | 36.232 | 69 | 40 | 1 | 24 | 88 | 127 | 195 | 7.99e-11 | 57.4 |
Find 223 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTTTCGTTCTTTGAAAAT+TGG | 0.138677 | 5_2:-14580459 | Msa0759060:five_prime_UTR |
| ACTGAGCTTGTTTGATTTAA+TGG | 0.143745 | 5_2:-14579770 | Msa0759060:five_prime_UTR |
| GACAGAGTTTGTGCACTTTC+TGG | 0.152436 | 5_2:-14576685 | Msa0759060:CDS |
| TAAACACCTCAAAACAAAAT+TGG | 0.163762 | 5_2:+14578879 | None:intergenic |
| ATTATCAACACAAGCCATTT+TGG | 0.174756 | 5_2:+14580389 | None:intergenic |
| GATTAGAAGCACGGCTTAAA+AGG | 0.188964 | 5_2:+14580607 | None:intergenic |
| CCACTGGGCGGCTCCGATTC+TGG | 0.200814 | 5_2:-14578747 | Msa0759060:five_prime_UTR |
| GGGTTGCCTTGTGCTGATTC+TGG | 0.201078 | 5_2:-14579121 | Msa0759060:five_prime_UTR |
| ATTTGGATGTTGAGCTTTAC+TGG | 0.203581 | 5_2:+14580859 | None:intergenic |
| AATGAACTATCTCATAGATT+TGG | 0.247258 | 5_2:-14579142 | Msa0759060:five_prime_UTR |
| CCCGTCTCTTGTTCCTTTGT+CGG | 0.248912 | 5_2:+14577584 | None:intergenic |
| ATTCTAAGGCTACTTGTCTA+AGG | 0.250611 | 5_2:+14579041 | None:intergenic |
| GAGGATGAGTAGTAGGAATT+TGG | 0.260487 | 5_2:-14579848 | Msa0759060:five_prime_UTR |
| TAAAAGGGTGCGTGATAAAA+AGG | 0.261069 | 5_2:+14580623 | None:intergenic |
| GCTCAATGGGAGAATGTTTC+AGG | 0.264221 | 5_2:-14579301 | Msa0759060:five_prime_UTR |
| TATTAGTGCTTGTTCCAAAA+TGG | 0.280036 | 5_2:-14580403 | Msa0759060:five_prime_UTR |
| AGCTACACATTGTAAGAATT+CGG | 0.282730 | 5_2:-14578304 | Msa0759060:five_prime_UTR |
| TTCGTGGAATGCAATGATTT+TGG | 0.298622 | 5_2:-14579824 | Msa0759060:five_prime_UTR |
| TGTTTGTCTGAGATCGTTCC+TGG | 0.299666 | 5_2:-14578347 | Msa0759060:five_prime_UTR |
| TGGTAATAGGCTAGGTTCTT+AGG | 0.300430 | 5_2:+14579352 | None:intergenic |
| AGTCAGAGAAGTTTGAAATT+TGG | 0.314997 | 5_2:-14578555 | Msa0759060:five_prime_UTR |
| CAAGTCCACAAGATTGCTTC+CGG | 0.318205 | 5_2:+14579237 | None:intergenic |
| ACTTTCGTTCTTTGAAAATT+GGG | 0.331700 | 5_2:-14580458 | Msa0759060:five_prime_UTR |
| GATAAGCAGAAACTGGTAAT+AGG | 0.333863 | 5_2:+14579339 | None:intergenic |
| CTGAGAGGAATTTGGTTACT+TGG | 0.334061 | 5_2:-14580143 | Msa0759060:five_prime_UTR |
| CCAATGAATGTTATTTCATC+AGG | 0.334871 | 5_2:+14579670 | None:intergenic |
| CTTGGAATTGTTTGATTAGT+GGG | 0.335151 | 5_2:-14580125 | Msa0759060:five_prime_UTR |
| GTTGAAGTTGTTTAGAGAAA+TGG | 0.335739 | 5_2:-14580073 | Msa0759060:five_prime_UTR |
| AAGCAAATGATTGATGTGTT+TGG | 0.339748 | 5_2:-14579592 | Msa0759060:five_prime_UTR |
| TGTAATGCCTGAGAGGAATT+TGG | 0.342826 | 5_2:-14580151 | Msa0759060:five_prime_UTR |
| GTAGATTCTGGCCATTCATT+TGG | 0.344151 | 5_2:+14580842 | None:intergenic |
| AAAATGTGACTCAAATTCTA+AGG | 0.356064 | 5_2:+14579027 | None:intergenic |
| CGGTTCATGGGAGTATGATT+AGG | 0.359126 | 5_2:-14579963 | Msa0759060:five_prime_UTR |
| TGGTTGAAATTGCTATAAAT+AGG | 0.360277 | 5_2:-14578443 | Msa0759060:five_prime_UTR |
| AATTCTTTGGTTCATATGTA+TGG | 0.366099 | 5_2:-14580306 | Msa0759060:five_prime_UTR |
| TTTGCCGGTGGAGAATTCTT+TGG | 0.370499 | 5_2:-14580319 | Msa0759060:five_prime_UTR |
| ATGAACTATCTCATAGATTT+GGG | 0.373215 | 5_2:-14579141 | Msa0759060:five_prime_UTR |
| AATTGCTATAAATAGGTGTT+TGG | 0.374168 | 5_2:-14578436 | Msa0759060:five_prime_UTR |
| TGGAATGGTGAGTCGGGATT+TGG | 0.379452 | 5_2:-14580244 | Msa0759060:five_prime_UTR |
| AGCAAATGATTGATGTGTTT+GGG | 0.382492 | 5_2:-14579591 | Msa0759060:five_prime_UTR |
| ATCCATGTCAACAAGAAGTT+TGG | 0.383372 | 5_2:+14579375 | None:intergenic |
| TCTGACTACAAAATCAAGAT+TGG | 0.384014 | 5_2:+14578571 | None:intergenic |
| GTGGGGATGTACTGGTTGCT+AGG | 0.384548 | 5_2:-14580278 | Msa0759060:five_prime_UTR |
| TCAAGAGAATATGTCTAATC+AGG | 0.386275 | 5_2:+14578260 | None:intergenic |
| TGTCTAATCAGGATTCAAAA+AGG | 0.390470 | 5_2:+14578271 | None:intergenic |
| GACAATGGTTTGTGCAGTTA+CGG | 0.391353 | 5_2:-14580022 | Msa0759060:five_prime_UTR |
| TTCATATGTATGGTTCTTGT+GGG | 0.393235 | 5_2:-14580296 | Msa0759060:five_prime_UTR |
| GCTACACATTGTAAGAATTC+GGG | 0.397745 | 5_2:-14578303 | Msa0759060:five_prime_UTR |
| GTTGCTAGGGTGATGTTTGA+TGG | 0.400512 | 5_2:-14580264 | Msa0759060:five_prime_UTR |
| CATAAATGATAAGCAGAAAC+TGG | 0.401288 | 5_2:+14579332 | None:intergenic |
| TTATGCAGTGGCTGCTCAAT+GGG | 0.406358 | 5_2:-14579314 | Msa0759060:five_prime_UTR |
| CTGATGAAGGAAAGAAAGTT+AGG | 0.406971 | 5_2:-14579268 | Msa0759060:five_prime_UTR |
| TATCTAAAGGGTTATTGAAA+TGG | 0.407986 | 5_2:+14580550 | None:intergenic |
| ACTTGGAATTGTTTGATTAG+TGG | 0.408097 | 5_2:-14580126 | Msa0759060:five_prime_UTR |
| GCATTCTTTGTGCGTGTGCT+CGG | 0.409225 | 5_2:-14579648 | Msa0759060:five_prime_UTR |
| ATTGAAAATGAAGATGAGTT+AGG | 0.410523 | 5_2:+14580733 | None:intergenic |
| AAAATGGCTTGTGTTGATAA+TGG | 0.411665 | 5_2:-14580387 | Msa0759060:five_prime_UTR |
| AGTGATGGGGCGTGAGAAGA+AGG | 0.411853 | 5_2:+14580791 | None:intergenic |
| AAAGAAGGAAAATCGGTTCA+TGG | 0.412967 | 5_2:-14579976 | Msa0759060:five_prime_UTR |
| CTCACAGGAGTCATTGTTAT+GGG | 0.413098 | 5_2:-14579455 | Msa0759060:five_prime_UTR |
| AAACACCTCAAAACAAAATT+GGG | 0.413407 | 5_2:+14578880 | None:intergenic |
| TTGAAAGAACTCACCGTAAC+GGG | 0.413539 | 5_2:-14580954 | Msa0759060:five_prime_UTR |
| TCTCACAGGAGTCATTGTTA+TGG | 0.418668 | 5_2:-14579456 | Msa0759060:five_prime_UTR |
| TGGTTCTTGTGGGGATGTAC+TGG | 0.420065 | 5_2:-14580286 | Msa0759060:five_prime_UTR |
| AAGTCCACAAGATTGCTTCC+GGG | 0.423003 | 5_2:+14579238 | None:intergenic |
| TCAAGAGAGATGTGTACTTA+GGG | 0.426186 | 5_2:-14579408 | Msa0759060:five_prime_UTR |
| TGGAGGATCTTAGTTTATAT+AGG | 0.427718 | 5_2:-14578951 | Msa0759060:five_prime_UTR |
| ATGGGCAGGCTGAGAATTAG+AGG | 0.430809 | 5_2:-14580054 | Msa0759060:five_prime_UTR |
| TTGAAGTTGTTTAGAGAAAT+GGG | 0.440354 | 5_2:-14580072 | Msa0759060:five_prime_UTR |
| ATGAAAGTCCAAGTGCAGAT+AGG | 0.440413 | 5_2:-14579711 | Msa0759060:five_prime_UTR |
| GTATGATTAGGTTGTTTATG+AGG | 0.441017 | 5_2:-14579951 | Msa0759060:five_prime_UTR |
| GCTTGTTTGATTTAATGGTT+GGG | 0.447392 | 5_2:-14579765 | Msa0759060:five_prime_UTR |
| AAGAACATGACAAAATTTGA+TGG | 0.449209 | 5_2:-14579484 | Msa0759060:five_prime_UTR |
| GTTTGATGGAATGGTGAGTC+GGG | 0.451653 | 5_2:-14580250 | Msa0759060:five_prime_UTR |
| CATTCTTTGTGCGTGTGCTC+GGG | 0.453720 | 5_2:-14579647 | Msa0759060:five_prime_UTR |
| CCTGATGAAATAACATTCAT+TGG | 0.455391 | 5_2:-14579670 | Msa0759060:five_prime_UTR |
| GAAATCTCACTAATAATAGT+TGG | 0.456589 | 5_2:+14576760 | None:intergenic |
| AGCTTGTTTGATTTAATGGT+TGG | 0.459621 | 5_2:-14579766 | Msa0759060:five_prime_UTR |
| GGCAAGAAACAGAAGGGTTT+AGG | 0.460982 | 5_2:-14576629 | None:intergenic |
| TAGACTTAAAGAAGGAAAAT+CGG | 0.463476 | 5_2:-14579983 | Msa0759060:five_prime_UTR |
| GTAGTAGGAATTTGGTTTCG+TGG | 0.467432 | 5_2:-14579840 | Msa0759060:five_prime_UTR |
| TTCAAGAGAGATGTGTACTT+AGG | 0.470258 | 5_2:-14579409 | Msa0759060:five_prime_UTR |
| GATGCACACCGCACCCGTTA+CGG | 0.471120 | 5_2:+14580941 | None:intergenic |
| GCATTTGATTGAAATTCCAC+TGG | 0.472976 | 5_2:-14578763 | Msa0759060:five_prime_UTR |
| AAAACGCCATGCACCAGAAT+CGG | 0.472982 | 5_2:+14578734 | None:intergenic |
| GTTCATATGTATGGTTCTTG+TGG | 0.473676 | 5_2:-14580297 | Msa0759060:five_prime_UTR |
| TGAAAGTCCAAGTGCAGATA+GGG | 0.473821 | 5_2:-14579710 | Msa0759060:five_prime_UTR |
| TTTATGCAGTGGCTGCTCAA+TGG | 0.474207 | 5_2:-14579315 | Msa0759060:five_prime_UTR |
| TCGTGGAACTCAATGATTGA+TGG | 0.477167 | 5_2:-14580219 | Msa0759060:five_prime_UTR |
| GTTATCTTTATCTATCATCC+TGG | 0.477600 | 5_2:+14579064 | None:intergenic |
| GAAGAAGGTGGTGAGTGGTT+TGG | 0.480861 | 5_2:+14580688 | None:intergenic |
| AATTGAAAATGCTAGGTTGA+AGG | 0.481602 | 5_2:-14576716 | Msa0759060:CDS |
| TCCAAGTGCAGATAGGGGTT+TGG | 0.482943 | 5_2:-14579704 | Msa0759060:five_prime_UTR |
| TTTGGATGTTGAGCTTTACT+GGG | 0.483314 | 5_2:+14580860 | None:intergenic |
| ATCCTCCACGCATCTTTCCC+AGG | 0.488443 | 5_2:+14578329 | None:intergenic |
| GGCAAATCTTCTTGCAAATG+TGG | 0.490410 | 5_2:-14579536 | Msa0759060:five_prime_UTR |
| GTGATGGGGCGTGAGAAGAA+GGG | 0.490784 | 5_2:+14580792 | None:intergenic |
| TAGAGGGAATGCTAGGACAA+TGG | 0.492385 | 5_2:-14580037 | Msa0759060:five_prime_UTR |
| CAAGTAACCAAATTCCTCTC+AGG | 0.494968 | 5_2:+14580144 | None:intergenic |
| TAACACAGAAAGTATCTAAA+GGG | 0.497025 | 5_2:+14580538 | None:intergenic |
| GTTACGGCTTGTGGTCGGTC+GGG | 0.503524 | 5_2:-14580006 | Msa0759060:five_prime_UTR |
| GGCACTGCCACAAGGTATAG+AGG | 0.504114 | 5_2:-14578640 | Msa0759060:five_prime_UTR |
| TTGTTATGGGCAAGTTTGCT+CGG | 0.504522 | 5_2:-14579442 | Msa0759060:five_prime_UTR |
| ATTAGAAGCACGGCTTAAAA+GGG | 0.505730 | 5_2:+14580608 | None:intergenic |
| GCAAATCTTCTTGCAAATGT+GGG | 0.506278 | 5_2:-14579535 | Msa0759060:five_prime_UTR |
| TTAACACAGAAAGTATCTAA+AGG | 0.506538 | 5_2:+14580537 | None:intergenic |
| CTGACTACAAAATCAAGATT+GGG | 0.509068 | 5_2:+14578572 | None:intergenic |
| TGAGTCGGGATTTGGTTTCG+TGG | 0.510221 | 5_2:-14580236 | Msa0759060:five_prime_UTR |
| ATTTCAAAGTGTCAAACAAT+CGG | 0.513261 | 5_2:-14579198 | Msa0759060:five_prime_UTR |
| TAGGGTGATGTTTGATGGAA+TGG | 0.515772 | 5_2:-14580259 | Msa0759060:five_prime_UTR |
| TCTGCTTATCATTTATGCAG+TGG | 0.517278 | 5_2:-14579326 | Msa0759060:five_prime_UTR |
| CGTGGAACTCAATGATTGAT+GGG | 0.518817 | 5_2:-14580218 | Msa0759060:five_prime_UTR |
| TAGATATGTATTGTAAATGC+GGG | 0.519431 | 5_2:-14579900 | Msa0759060:five_prime_UTR |
| TCCGACAAAGGAACAAGAGA+CGG | 0.523267 | 5_2:-14577585 | Msa0759060:CDS |
| AAAGTGGCGAGAGTAGATTC+TGG | 0.525622 | 5_2:+14580830 | None:intergenic |
| TGCTGATTCTGGACAATCAT+CGG | 0.526031 | 5_2:-14579110 | Msa0759060:five_prime_UTR |
| AATAGCTTTATGAGGAACAT+AGG | 0.526307 | 5_2:+14580488 | None:intergenic |
| TGCCAAACTTCTTGTTGACA+TGG | 0.526470 | 5_2:-14579377 | Msa0759060:five_prime_UTR |
| TTGTCACAATTTGAACATGT+AGG | 0.526784 | 5_2:+14576784 | None:intergenic |
| GTTTGATTTAATGGTTGGGA+TGG | 0.529151 | 5_2:-14579761 | Msa0759060:five_prime_UTR |
| AGTTACGGCTTGTGGTCGGT+CGG | 0.531988 | 5_2:-14580007 | Msa0759060:five_prime_UTR |
| TTTCTCATGGGGCATCGATA+CGG | 0.532540 | 5_2:-14578918 | Msa0759060:five_prime_UTR |
| AACAAGCTCAGTCCATCCTC+AGG | 0.533163 | 5_2:+14579781 | None:intergenic |
| AGGTAGCTGCAAGTTTCTCA+TGG | 0.533323 | 5_2:-14578931 | Msa0759060:five_prime_UTR |
| AGAAGACGGAGAAGAAGTGA+TGG | 0.533437 | 5_2:+14580776 | None:intergenic |
| AAGCTCAACATCCAAATGAA+TGG | 0.534703 | 5_2:-14580853 | Msa0759060:five_prime_UTR |
| TTCTAAGGCTACTTGTCTAA+GGG | 0.535254 | 5_2:+14579042 | None:intergenic |
| TGGATGAACATGCTCATGCT+TGG | 0.535554 | 5_2:+14580912 | None:intergenic |
| TCAACGTTTCCTGACAGCAT+TGG | 0.536644 | 5_2:+14578521 | None:intergenic |
| TGGGGATGTACTGGTTGCTA+GGG | 0.537171 | 5_2:-14580277 | Msa0759060:five_prime_UTR |
| GTGTCAAACAATCGGCGCGA+AGG | 0.539425 | 5_2:-14579190 | Msa0759060:five_prime_UTR |
| CAACCACTGAACAACCTTGG+AGG | 0.539692 | 5_2:-14578968 | Msa0759060:five_prime_UTR |
| AAGAAGGAAAATCGGTTCAT+GGG | 0.541008 | 5_2:-14579975 | Msa0759060:five_prime_UTR |
| GCGGCTCCGATTCTGGTGCA+TGG | 0.544061 | 5_2:-14578740 | Msa0759060:five_prime_UTR |
| GAAGGGCTTGAATTTGAAGA+AGG | 0.544248 | 5_2:+14580673 | None:intergenic |
| AGAGAGTCGACAAGAGCAAG+AGG | 0.547069 | 5_2:-14577627 | Msa0759060:CDS |
| TCTTTGTGCGTGTGCTCGGG+CGG | 0.547762 | 5_2:-14579644 | Msa0759060:five_prime_UTR |
| ACCAAACCCCTATCTGCACT+TGG | 0.548692 | 5_2:+14579703 | None:intergenic |
| GGGCTTGAATTTGAAGAAGG+TGG | 0.548838 | 5_2:+14580676 | None:intergenic |
| GCAGAAACTGGTAATAGGCT+AGG | 0.550998 | 5_2:+14579344 | None:intergenic |
| ATAGATATGTATTGTAAATG+CGG | 0.551089 | 5_2:-14579901 | Msa0759060:five_prime_UTR |
| CATTTGATTGAAATTCCACT+GGG | 0.551467 | 5_2:-14578762 | Msa0759060:five_prime_UTR |
| GTGCAGTTACGGCTTGTGGT+CGG | 0.552259 | 5_2:-14580011 | Msa0759060:five_prime_UTR |
| TGAGAAGAAGGGGTTACGGA+AGG | 0.556787 | 5_2:+14580803 | None:intergenic |
| GTTTGTGCAGTTACGGCTTG+TGG | 0.557369 | 5_2:-14580015 | Msa0759060:five_prime_UTR |
| ATTGATGGGTATGTCAAAGT+TGG | 0.557989 | 5_2:-14580204 | Msa0759060:five_prime_UTR |
| TGAATGAAATTTAGCATCAG+TGG | 0.558663 | 5_2:-14578833 | Msa0759060:five_prime_UTR |
| GTCCATCCTCAGGATTCCCA+TGG | 0.558710 | 5_2:+14579791 | None:intergenic |
| GAAGACGGAGAAGAAGTGAT+GGG | 0.560300 | 5_2:+14580777 | None:intergenic |
| TTAGACATATTCTCTTGAGA+TGG | 0.560674 | 5_2:-14578255 | Msa0759060:five_prime_UTR |
| ATTTGATGGGTATATCTCAC+AGG | 0.561363 | 5_2:-14579470 | Msa0759060:five_prime_UTR |
| TGATGGGGCGTGAGAAGAAG+GGG | 0.563612 | 5_2:+14580793 | None:intergenic |
| AACAACTTCAACGCATAACC+AGG | 0.566178 | 5_2:+14580084 | None:intergenic |
| CGGAACTGTTGAGTGAAGGC+AGG | 0.566393 | 5_2:-14579624 | Msa0759060:five_prime_UTR |
| GATCTCAGACAAACAATCAA+AGG | 0.567322 | 5_2:+14578355 | None:intergenic |
| TGAGAATTAGAGGGAATGCT+AGG | 0.567526 | 5_2:-14580044 | Msa0759060:five_prime_UTR |
| GGTAGCTGCAAGTTTCTCAT+GGG | 0.569511 | 5_2:-14578930 | Msa0759060:five_prime_UTR |
| TGGTAGAATGTGTCATGGGC+AGG | 0.572602 | 5_2:-14580367 | Msa0759060:five_prime_UTR |
| AAACAACCACTGAACAACCT+TGG | 0.572690 | 5_2:-14578971 | Msa0759060:five_prime_UTR |
| TTTGAAAGAACTCACCGTAA+CGG | 0.572726 | 5_2:-14580955 | Msa0759060:five_prime_UTR |
| GAAGGTGGTGAAGAAGAAGA+CGG | 0.576728 | 5_2:+14580762 | None:intergenic |
| TTGTAAATGCGGGAGAGTTG+AGG | 0.577950 | 5_2:-14579890 | Msa0759060:five_prime_UTR |
| GTTTGTCTGAGATCGTTCCT+GGG | 0.581994 | 5_2:-14578346 | Msa0759060:five_prime_UTR |
| GTCTTCAAATTGAAAATGCT+AGG | 0.584052 | 5_2:-14576723 | Msa0759060:CDS |
| TGTTTGATGGAATGGTGAGT+CGG | 0.587687 | 5_2:-14580251 | Msa0759060:five_prime_UTR |
| AGTTGTTTAGAGAAATGGGC+AGG | 0.588480 | 5_2:-14580068 | Msa0759060:five_prime_UTR |
| AGAACATGACAAAATTTGAT+GGG | 0.589187 | 5_2:-14579483 | Msa0759060:five_prime_UTR |
| CCGACAAAGGAACAAGAGAC+GGG | 0.589475 | 5_2:-14577584 | Msa0759060:CDS |
| GTTGGGATGGAGAGTGTGAA+AGG | 0.590206 | 5_2:-14579748 | Msa0759060:five_prime_UTR |
| AAAAGCTAGAAGTGATGAGA+AGG | 0.590599 | 5_2:+14580655 | None:intergenic |
| CTTATTTGATGAGATTGAGA+TGG | 0.591562 | 5_2:-14576656 | Msa0759060:CDS |
| CGGGCGGAACTGTTGAGTGA+AGG | 0.593889 | 5_2:-14579628 | Msa0759060:five_prime_UTR |
| AGCATGAGCATGTTCATCCA+TGG | 0.597629 | 5_2:-14580909 | Msa0759060:five_prime_UTR |
| CAATGAATGTTATTTCATCA+GGG | 0.599325 | 5_2:+14579671 | None:intergenic |
| AGAACTCACCGTAACGGGTG+CGG | 0.601266 | 5_2:-14580949 | Msa0759060:five_prime_UTR |
| CAAATCTTCTTGCAAATGTG+GGG | 0.607505 | 5_2:-14579534 | Msa0759060:five_prime_UTR |
| TGAGTGGTTTGGCAATGAGA+AGG | 0.607604 | 5_2:+14580699 | None:intergenic |
| CGGTCGGGTAGACTTAAAGA+AGG | 0.611428 | 5_2:-14579991 | Msa0759060:five_prime_UTR |
| TGGTGAAGGCAAGAAACAGA+AGG | 0.611876 | 5_2:-14576636 | Msa0759060:CDS |
| GGCGTGAGAAGAAGGGGTTA+CGG | 0.611910 | 5_2:+14580799 | None:intergenic |
| CTGTGCAGAGATTAGAAGCA+CGG | 0.617414 | 5_2:+14580598 | None:intergenic |
| GATGGTGCTCATCGATGAGA+AGG | 0.622187 | 5_2:-14578237 | Msa0759060:intron |
| GAGAAGAAGGGGTTACGGAA+GGG | 0.625703 | 5_2:+14580804 | None:intergenic |
| ATCCATGGGAATCCTGAGGA+TGG | 0.626380 | 5_2:-14579793 | Msa0759060:five_prime_UTR |
| ATTCTGTGGGCACTGCCACA+AGG | 0.627631 | 5_2:-14578648 | Msa0759060:five_prime_UTR |
| AATACCCGGAAGCAATCTTG+TGG | 0.628479 | 5_2:-14579242 | Msa0759060:five_prime_UTR |
| CCAGAATCGGAGCCGCCCAG+TGG | 0.629224 | 5_2:+14578747 | None:intergenic |
| TGATGAGATTGAGATGGTGA+AGG | 0.630063 | 5_2:-14576650 | Msa0759060:CDS |
| GATCCTCCAAGGTTGTTCAG+TGG | 0.630118 | 5_2:+14578965 | None:intergenic |
| TGAACCAAAGAATTCTCCAC+CGG | 0.633870 | 5_2:+14580315 | None:intergenic |
| TGAGTTAGGAATTGTGAAGG+TGG | 0.635180 | 5_2:+14580747 | None:intergenic |
| CAAGAGAGATGTGTACTTAG+GGG | 0.635874 | 5_2:-14579407 | Msa0759060:five_prime_UTR |
| GATAATGGTAGAATGTGTCA+TGG | 0.637159 | 5_2:-14580372 | Msa0759060:five_prime_UTR |
| TCGTTCCTGGGAAAGATGCG+TGG | 0.643650 | 5_2:-14578334 | Msa0759060:five_prime_UTR |
| TGAAAGGTGGTGAATCGCCA+TGG | 0.645182 | 5_2:+14580892 | None:intergenic |
| AAATGTGGGGCTTATTGACG+AGG | 0.649002 | 5_2:-14579521 | Msa0759060:five_prime_UTR |
| GAAAGTCCAAGTGCAGATAG+GGG | 0.649358 | 5_2:-14579709 | Msa0759060:five_prime_UTR |
| ATATAAACTAAGATCCTCCA+AGG | 0.650209 | 5_2:+14578954 | None:intergenic |
| ACACATTGTAAGAATTCGGG+AGG | 0.655466 | 5_2:-14578300 | Msa0759060:five_prime_UTR |
| TCATATGTATGGTTCTTGTG+GGG | 0.661405 | 5_2:-14580295 | Msa0759060:five_prime_UTR |
| AATTTGAAGAAGGTGGTGAG+TGG | 0.664496 | 5_2:+14580683 | None:intergenic |
| AAAAGAGTACAATCCGACAA+AGG | 0.664827 | 5_2:-14577597 | Msa0759060:CDS |
| ATAATGGTAGAATGTGTCAT+GGG | 0.665219 | 5_2:-14580371 | Msa0759060:five_prime_UTR |
| GTGCAGATAGGGGTTTGGTG+AGG | 0.665872 | 5_2:-14579699 | Msa0759060:five_prime_UTR |
| TGGGCAGGCTGAGAATTAGA+GGG | 0.668023 | 5_2:-14580053 | Msa0759060:five_prime_UTR |
| AAAGCTAGAAGTGATGAGAA+GGG | 0.668279 | 5_2:+14580656 | None:intergenic |
| GAGTGTGAAAGGTGAAGTTG+AGG | 0.671225 | 5_2:-14579737 | Msa0759060:five_prime_UTR |
| GGTGAAGGCAAGAAACAGAA+GGG | 0.672932 | 5_2:-14576635 | Msa0759060:CDS |
| AGAAAGTTAGGCATAATACC+CGG | 0.674773 | 5_2:-14579256 | Msa0759060:five_prime_UTR |
| TAAATGCGGGAGAGTTGAGG+CGG | 0.675286 | 5_2:-14579887 | Msa0759060:five_prime_UTR |
| TTGCATCCATGGGAATCCTG+AGG | 0.677504 | 5_2:-14579797 | Msa0759060:five_prime_UTR |
| CAAACTACCTCTATACCTTG+TGG | 0.678540 | 5_2:+14578633 | None:intergenic |
| AAGACGGAGAAGAAGTGATG+GGG | 0.679671 | 5_2:+14580778 | None:intergenic |
| AGATGAGTTAGGAATTGTGA+AGG | 0.680145 | 5_2:+14580744 | None:intergenic |
| ACGGAAAACTCATTTGACGA+AGG | 0.684179 | 5_2:-14577659 | Msa0759060:CDS |
| GTAGCTGCAAGTTTCTCATG+GGG | 0.694431 | 5_2:-14578929 | Msa0759060:five_prime_UTR |
| AAGAGACGGGAAAACACCAG+TGG | 0.694738 | 5_2:-14577571 | Msa0759060:CDS |
| TTGATTGAAATTCCACTGGG+CGG | 0.695084 | 5_2:-14578759 | Msa0759060:five_prime_UTR |
| AAAGACAGCTGCTGACACGA+AGG | 0.698157 | 5_2:+14578490 | None:intergenic |
| GATTGTCCAGAATCAGCACA+AGG | 0.701391 | 5_2:+14579115 | None:intergenic |
| TTCCTGGGAAAGATGCGTGG+AGG | 0.701822 | 5_2:-14578331 | Msa0759060:five_prime_UTR |
| TGTTTGATGTAATGCCTGAG+AGG | 0.710908 | 5_2:-14580158 | Msa0759060:five_prime_UTR |
| TGATTCTGGACAATCATCGG+TGG | 0.718267 | 5_2:-14579107 | Msa0759060:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACAAACAATTTTTTAAAAAA+AGG | + | chr5_2:14579918-14579937 | None:intergenic | 10.0% |
| !! | ATTATATAATATCTTTATGA+TGG | - | chr5_2:14580815-14580834 | Msa0759060:five_prime_UTR | 10.0% |
| !!! | TAATATGTTTCAGATATTTT+TGG | - | chr5_2:14580597-14580616 | Msa0759060:five_prime_UTR | 15.0% |
| !!! | CATTTGTGTTATATTTTTAA+TGG | + | chr5_2:14580726-14580745 | None:intergenic | 15.0% |
| !! | ATATTATATAATCTAAGCTT+AGG | + | chr5_2:14580807-14580826 | None:intergenic | 15.0% |
| !!! | TAAAAAACAATAGCTTTATG+AGG | + | chr5_2:14577158-14577177 | None:intergenic | 20.0% |
| !! | ATAGATATGTATTGTAAATG+CGG | - | chr5_2:14577734-14577753 | Msa0759060:intron | 20.0% |
| !!! | GAAATCTGTTTTTGAATTTA+TGG | - | chr5_2:14579489-14579508 | Msa0759060:five_prime_UTR | 20.0% |
| !!! | GGATAATTTAAAACAGAATA+GGG | + | chr5_2:14579740-14579759 | None:intergenic | 20.0% |
| !!! | TGGATAATTTAAAACAGAAT+AGG | + | chr5_2:14579741-14579760 | None:intergenic | 20.0% |
| !!! | TAGACTGAGTTATTTTTTAT+TGG | - | chr5_2:14579881-14579900 | Msa0759060:five_prime_UTR | 20.0% |
| !!! | AAATATAAAGAAGGTATTGT+TGG | + | chr5_2:14580152-14580171 | None:intergenic | 20.0% |
| !! | TCTATACCTTAAAATAATGT+GGG | + | chr5_2:14580267-14580286 | None:intergenic | 20.0% |
| !! | TTCTATACCTTAAAATAATG+TGG | + | chr5_2:14580268-14580287 | None:intergenic | 20.0% |
| !!! | TTTAGAGGTATTGTTAATAT+TGG | - | chr5_2:14580367-14580386 | Msa0759060:five_prime_UTR | 20.0% |
| !!! | AGTTGTTATTTGTTTTCTTT+TGG | - | chr5_2:14580421-14580440 | Msa0759060:five_prime_UTR | 20.0% |
| !!! | GTTGTTATTTGTTTTCTTTT+GGG | - | chr5_2:14580422-14580441 | Msa0759060:five_prime_UTR | 20.0% |
| !! | AAGCTATTATTTGGAAAATA+AGG | + | chr5_2:14580483-14580502 | None:intergenic | 20.0% |
| !! | TAAAGTTTAGAAAAATTGTG+AGG | + | chr5_2:14580512-14580531 | None:intergenic | 20.0% |
| !! | TTTGAATCTGAAAAAATAGT+AGG | + | chr5_2:14580565-14580584 | None:intergenic | 20.0% |
| !!! | AGCTTGTTTTTAACTGTTTT+GGG | + | chr5_2:14576651-14576670 | None:intergenic | 25.0% |
| !!! | TAGCTTGTTTTTAACTGTTT+TGG | + | chr5_2:14576652-14576671 | None:intergenic | 25.0% |
| ! | ATTGAAAATGAAGATGAGTT+AGG | + | chr5_2:14576905-14576924 | None:intergenic | 25.0% |
| ! | TATCTAAAGGGTTATTGAAA+TGG | + | chr5_2:14577088-14577107 | None:intergenic | 25.0% |
| !!! | TAACACAGAAAGTATCTAAA+GGG | + | chr5_2:14577100-14577119 | None:intergenic | 25.0% |
| !!! | TTAACACAGAAAGTATCTAA+AGG | + | chr5_2:14577101-14577120 | None:intergenic | 25.0% |
| !! | TACTTTCGTTCTTTGAAAAT+TGG | - | chr5_2:14577176-14577195 | Msa0759060:intron | 25.0% |
| !! | ACTTTCGTTCTTTGAAAATT+GGG | - | chr5_2:14577177-14577196 | Msa0759060:intron | 25.0% |
| !! | AATTCTTTGGTTCATATGTA+TGG | - | chr5_2:14577329-14577348 | Msa0759060:intron | 25.0% |
| ! | TTGAAGTTGTTTAGAGAAAT+GGG | - | chr5_2:14577563-14577582 | Msa0759060:CDS | 25.0% |
| ! | TAGACTTAAAGAAGGAAAAT+CGG | - | chr5_2:14577652-14577671 | Msa0759060:CDS | 25.0% |
| ! | TAGATATGTATTGTAAATGC+GGG | - | chr5_2:14577735-14577754 | Msa0759060:intron | 25.0% |
| !!! | CAATGAATGTTATTTCATCA+GGG | + | chr5_2:14577967-14577986 | None:intergenic | 25.0% |
| ! | AAGAACATGACAAAATTTGA+TGG | - | chr5_2:14578151-14578170 | Msa0759060:intron | 25.0% |
| ! | AGAACATGACAAAATTTGAT+GGG | - | chr5_2:14578152-14578171 | Msa0759060:intron | 25.0% |
| !! | ATTTCAAAGTGTCAAACAAT+CGG | - | chr5_2:14578437-14578456 | Msa0759060:five_prime_UTR | 25.0% |
| ! | AATGAACTATCTCATAGATT+TGG | - | chr5_2:14578493-14578512 | Msa0759060:five_prime_UTR | 25.0% |
| ! | ATGAACTATCTCATAGATTT+GGG | - | chr5_2:14578494-14578513 | Msa0759060:five_prime_UTR | 25.0% |
| ! | AAAATGTGACTCAAATTCTA+AGG | + | chr5_2:14578611-14578630 | None:intergenic | 25.0% |
| !! | TAAGTTTCCTTGATTTTTAC+TGG | - | chr5_2:14578638-14578657 | Msa0759060:five_prime_UTR | 25.0% |
| !!! | AATATCCCAATTTTGTTTTG+AGG | - | chr5_2:14578750-14578769 | Msa0759060:five_prime_UTR | 25.0% |
| ! | AAACACCTCAAAACAAAATT+GGG | + | chr5_2:14578758-14578777 | None:intergenic | 25.0% |
| ! | TAAACACCTCAAAACAAAAT+TGG | + | chr5_2:14578759-14578778 | None:intergenic | 25.0% |
| !!! | TTGTTTTTGATCAAATTCTG+TGG | - | chr5_2:14578973-14578992 | Msa0759060:five_prime_UTR | 25.0% |
| !!! | TGTTTTTGATCAAATTCTGT+GGG | - | chr5_2:14578974-14578993 | Msa0759060:five_prime_UTR | 25.0% |
| !!! | CATTTTTCAATGGAGATTTT+GGG | + | chr5_2:14579035-14579054 | None:intergenic | 25.0% |
| !!! | TCATTTTTCAATGGAGATTT+TGG | + | chr5_2:14579036-14579055 | None:intergenic | 25.0% |
| ! | TGGTTGAAATTGCTATAAAT+AGG | - | chr5_2:14579192-14579211 | Msa0759060:five_prime_UTR | 25.0% |
| ! | AATTGCTATAAATAGGTGTT+TGG | - | chr5_2:14579199-14579218 | Msa0759060:five_prime_UTR | 25.0% |
| !!! | TATGATTTTGGTGAATTTGT+AGG | - | chr5_2:14579520-14579539 | Msa0759060:five_prime_UTR | 25.0% |
| !!! | ATGATTTTGGTGAATTTGTA+GGG | - | chr5_2:14579521-14579540 | Msa0759060:five_prime_UTR | 25.0% |
| ! | ATTTATCAATCTTTGTATGC+AGG | + | chr5_2:14579690-14579709 | None:intergenic | 25.0% |
| ! | ATGTGATTTATACTTGAAGA+AGG | + | chr5_2:14579778-14579797 | None:intergenic | 25.0% |
| ! | ACCTTCTTTATATTTAGTTG+CGG | - | chr5_2:14580157-14580176 | Msa0759060:five_prime_UTR | 25.0% |
| !! | GCTAAATTTTACTTCCAAAA+GGG | + | chr5_2:14580347-14580366 | None:intergenic | 25.0% |
| !! | AGCTAAATTTTACTTCCAAA+AGG | + | chr5_2:14580348-14580367 | None:intergenic | 25.0% |
| !!! | GAAGTAAAATTTAGCTTTAG+AGG | - | chr5_2:14580352-14580371 | Msa0759060:five_prime_UTR | 25.0% |
| ! | ATAAACATGTCAATTGTTAG+GGG | + | chr5_2:14580395-14580414 | None:intergenic | 25.0% |
| ! | CATAAACATGTCAATTGTTA+GGG | + | chr5_2:14580396-14580415 | None:intergenic | 25.0% |
| ! | ACATAAACATGTCAATTGTT+AGG | + | chr5_2:14580397-14580416 | None:intergenic | 25.0% |
| ! | ACAATTGACATGTTTATGTT+CGG | - | chr5_2:14580398-14580417 | Msa0759060:five_prime_UTR | 25.0% |
| ! | AGGAAAGATAAGCTATTATT+TGG | + | chr5_2:14580492-14580511 | None:intergenic | 25.0% |
| ! | TAGGATGAAATTAAGAGTAA+AGG | + | chr5_2:14580546-14580565 | None:intergenic | 25.0% |
| !!! | AAGTTGATGTCATTTTTACA+TGG | - | chr5_2:14580747-14580766 | Msa0759060:five_prime_UTR | 25.0% |
| !!! | TTTACATGGTTTTATCTTTC+TGG | - | chr5_2:14580761-14580780 | Msa0759060:five_prime_UTR | 25.0% |
| ! | GAAATCTCACTAATAATAGT+TGG | + | chr5_2:14580878-14580897 | None:intergenic | 25.0% |
| !! | TAGCATTTTCAATTTGAAGA+CGG | + | chr5_2:14580913-14580932 | None:intergenic | 25.0% |
| !!! | TTGTTTTTAACTGTTTTGGG+GGG | + | chr5_2:14576648-14576667 | None:intergenic | 30.0% |
| !!! | CTTGTTTTTAACTGTTTTGG+GGG | + | chr5_2:14576649-14576668 | None:intergenic | 30.0% |
| !!! | GCTTGTTTTTAACTGTTTTG+GGG | + | chr5_2:14576650-14576669 | None:intergenic | 30.0% |
| !! | AATAGCTTTATGAGGAACAT+AGG | + | chr5_2:14577150-14577169 | None:intergenic | 30.0% |
| TATTAGTGCTTGTTCCAAAA+TGG | - | chr5_2:14577232-14577251 | Msa0759060:intron | 30.0% | |
| ! | ATTATCAACACAAGCCATTT+TGG | + | chr5_2:14577249-14577268 | None:intergenic | 30.0% |
| ! | AAAATGGCTTGTGTTGATAA+TGG | - | chr5_2:14577248-14577267 | Msa0759060:intron | 30.0% |
| ATAATGGTAGAATGTGTCAT+GGG | - | chr5_2:14577264-14577283 | Msa0759060:intron | 30.0% | |
| TTCATATGTATGGTTCTTGT+GGG | - | chr5_2:14577339-14577358 | Msa0759060:intron | 30.0% | |
| ACTTGGAATTGTTTGATTAG+TGG | - | chr5_2:14577509-14577528 | Msa0759060:intron | 30.0% | |
| CTTGGAATTGTTTGATTAGT+GGG | - | chr5_2:14577510-14577529 | Msa0759060:intron | 30.0% | |
| GTTGAAGTTGTTTAGAGAAA+TGG | - | chr5_2:14577562-14577581 | Msa0759060:CDS | 30.0% | |
| ! | GTATGATTAGGTTGTTTATG+AGG | - | chr5_2:14577684-14577703 | Msa0759060:intron | 30.0% |
| ! | ACTGAGCTTGTTTGATTTAA+TGG | - | chr5_2:14577865-14577884 | Msa0759060:intron | 30.0% |
| ! | AGCTTGTTTGATTTAATGGT+TGG | - | chr5_2:14577869-14577888 | Msa0759060:intron | 30.0% |
| ! | GCTTGTTTGATTTAATGGTT+GGG | - | chr5_2:14577870-14577889 | Msa0759060:intron | 30.0% |
| !! | CCAATGAATGTTATTTCATC+AGG | + | chr5_2:14577968-14577987 | None:intergenic | 30.0% |
| CCTGATGAAATAACATTCAT+TGG | - | chr5_2:14577965-14577984 | Msa0759060:intron | 30.0% | |
| AAGCAAATGATTGATGTGTT+TGG | - | chr5_2:14578043-14578062 | Msa0759060:intron | 30.0% | |
| AGCAAATGATTGATGTGTTT+GGG | - | chr5_2:14578044-14578063 | Msa0759060:intron | 30.0% | |
| ! | CAAATTTTGTCATGTTCTTC+AGG | + | chr5_2:14578150-14578169 | None:intergenic | 30.0% |
| CATAAATGATAAGCAGAAAC+TGG | + | chr5_2:14578306-14578325 | None:intergenic | 30.0% | |
| GTTATCTTTATCTATCATCC+TGG | + | chr5_2:14578574-14578593 | None:intergenic | 30.0% | |
| !! | GTTTTGACCAGTAAAAATCA+AGG | + | chr5_2:14578648-14578667 | None:intergenic | 30.0% |
| ATATAAACTAAGATCCTCCA+AGG | + | chr5_2:14578684-14578703 | None:intergenic | 30.0% | |
| TGGAGGATCTTAGTTTATAT+AGG | - | chr5_2:14578684-14578703 | Msa0759060:five_prime_UTR | 30.0% | |
| TGAATGAAATTTAGCATCAG+TGG | - | chr5_2:14578802-14578821 | Msa0759060:five_prime_UTR | 30.0% | |
| CATTTGATTGAAATTCCACT+GGG | - | chr5_2:14578873-14578892 | Msa0759060:five_prime_UTR | 30.0% | |
| !!! | GCGTTTTTTCTCTAATTTTC+TGG | - | chr5_2:14578917-14578936 | Msa0759060:five_prime_UTR | 30.0% |
| CTCCATTGAAAAATGAAATG+CGG | - | chr5_2:14579040-14579059 | Msa0759060:five_prime_UTR | 30.0% | |
| CTGACTACAAAATCAAGATT+GGG | + | chr5_2:14579066-14579085 | None:intergenic | 30.0% | |
| TCTGACTACAAAATCAAGAT+TGG | + | chr5_2:14579067-14579086 | None:intergenic | 30.0% | |
| ! | AGTCAGAGAAGTTTGAAATT+TGG | - | chr5_2:14579080-14579099 | Msa0759060:five_prime_UTR | 30.0% |
| AGAGAAAAACAATGGCAATT+CGG | + | chr5_2:14579173-14579192 | None:intergenic | 30.0% | |
| TTTCAACCAGAGAAAAACAA+TGG | + | chr5_2:14579181-14579200 | None:intergenic | 30.0% | |
| AGCTACACATTGTAAGAATT+CGG | - | chr5_2:14579331-14579350 | Msa0759060:five_prime_UTR | 30.0% | |
| TAATCAGGATTCAAAAAGGT+TGG | + | chr5_2:14579363-14579382 | None:intergenic | 30.0% | |
| TGTCTAATCAGGATTCAAAA+AGG | + | chr5_2:14579367-14579386 | None:intergenic | 30.0% | |
| TCAAGAGAATATGTCTAATC+AGG | + | chr5_2:14579378-14579397 | None:intergenic | 30.0% | |
| TTAGACATATTCTCTTGAGA+TGG | - | chr5_2:14579380-14579399 | Msa0759060:five_prime_UTR | 30.0% | |
| ! | TTTGAAACAAAACATGAGCA+AGG | + | chr5_2:14579452-14579471 | None:intergenic | 30.0% |
| !! | ATGGTCGTTTTGTATGATTT+TGG | - | chr5_2:14579508-14579527 | Msa0759060:five_prime_UTR | 30.0% |
| AATCTTTGTATGCAGGATAT+GGG | + | chr5_2:14579683-14579702 | None:intergenic | 30.0% | |
| ! | ATTGTTTTCGTTGTTGAAGA+CGG | - | chr5_2:14579957-14579976 | Msa0759060:five_prime_UTR | 30.0% |
| ! | AAAACACCAGTGGAATTTTT+CGG | - | chr5_2:14580074-14580093 | Msa0759060:five_prime_UTR | 30.0% |
| !! | TTTTCGGTCAGTTTGATTTA+AGG | - | chr5_2:14580090-14580109 | Msa0759060:five_prime_UTR | 30.0% |
| ! | TTTCGGTCAGTTTGATTTAA+GGG | - | chr5_2:14580091-14580110 | Msa0759060:five_prime_UTR | 30.0% |
| ACCGCAACTAAATATAAAGA+AGG | + | chr5_2:14580161-14580180 | None:intergenic | 30.0% | |
| !! | GTTGTTCCCACATTATTTTA+AGG | - | chr5_2:14580258-14580277 | Msa0759060:five_prime_UTR | 30.0% |
| !! | GTTTTCTTTTGGGAATGAAA+TGG | - | chr5_2:14580432-14580451 | Msa0759060:five_prime_UTR | 30.0% |
| AATGAAATGGTTTATCACCA+AGG | - | chr5_2:14580445-14580464 | Msa0759060:five_prime_UTR | 30.0% | |
| ATTAAGAGTAAAGGTGACAA+TGG | + | chr5_2:14580537-14580556 | None:intergenic | 30.0% | |
| !!! | TGTTTCAGATATTTTTGGCA+AGG | - | chr5_2:14580602-14580621 | Msa0759060:five_prime_UTR | 30.0% |
| !! | ATCTTTATGATGGATGCAAT+AGG | - | chr5_2:14580825-14580844 | Msa0759060:five_prime_UTR | 30.0% |
| TTGTCACAATTTGAACATGT+AGG | + | chr5_2:14580854-14580873 | None:intergenic | 30.0% | |
| GTCTTCAAATTGAAAATGCT+AGG | - | chr5_2:14580912-14580931 | Msa0759060:five_prime_UTR | 30.0% | |
| ! | AATTGAAAATGCTAGGTTGA+AGG | - | chr5_2:14580919-14580938 | Msa0759060:five_prime_UTR | 30.0% |
| CTTATTTGATGAGATTGAGA+TGG | - | chr5_2:14580979-14580998 | Msa0759060:five_prime_UTR | 30.0% | |
| TTTGAAAGAACTCACCGTAA+CGG | - | chr5_2:14576680-14576699 | Msa0759060:CDS | 35.0% | |
| !!! | TACTGGGTTTTGAGATTGAA+AGG | + | chr5_2:14576762-14576781 | None:intergenic | 35.0% |
| TTTGGATGTTGAGCTTTACT+GGG | + | chr5_2:14576778-14576797 | None:intergenic | 35.0% | |
| ATTTGGATGTTGAGCTTTAC+TGG | + | chr5_2:14576779-14576798 | None:intergenic | 35.0% | |
| AAGCTCAACATCCAAATGAA+TGG | - | chr5_2:14576782-14576801 | Msa0759060:CDS | 35.0% | |
| AGATGAGTTAGGAATTGTGA+AGG | + | chr5_2:14576894-14576913 | None:intergenic | 35.0% | |
| AAAGCTAGAAGTGATGAGAA+GGG | + | chr5_2:14576982-14577001 | None:intergenic | 35.0% | |
| AAAAGCTAGAAGTGATGAGA+AGG | + | chr5_2:14576983-14577002 | None:intergenic | 35.0% | |
| ! | AAAAGGGTGCGTGATAAAAA+GGG | + | chr5_2:14577014-14577033 | None:intergenic | 35.0% |
| ! | TAAAAGGGTGCGTGATAAAA+AGG | + | chr5_2:14577015-14577034 | None:intergenic | 35.0% |
| ! | ATTAGAAGCACGGCTTAAAA+GGG | + | chr5_2:14577030-14577049 | None:intergenic | 35.0% |
| ! | GATAATGGTAGAATGTGTCA+TGG | - | chr5_2:14577263-14577282 | Msa0759060:intron | 35.0% |
| GTTCATATGTATGGTTCTTG+TGG | - | chr5_2:14577338-14577357 | Msa0759060:intron | 35.0% | |
| TCATATGTATGGTTCTTGTG+GGG | - | chr5_2:14577340-14577359 | Msa0759060:intron | 35.0% | |
| ! | ATTGATGGGTATGTCAAAGT+TGG | - | chr5_2:14577431-14577450 | Msa0759060:intron | 35.0% |
| !!! | TTTGATTAGTGGGTTTTCGA+AGG | - | chr5_2:14577520-14577539 | Msa0759060:intron | 35.0% |
| !!! | TTGATTAGTGGGTTTTCGAA+GGG | - | chr5_2:14577521-14577540 | Msa0759060:intron | 35.0% |
| ! | AAAGAAGGAAAATCGGTTCA+TGG | - | chr5_2:14577659-14577678 | Msa0759060:CDS | 35.0% |
| ! | AAGAAGGAAAATCGGTTCAT+GGG | - | chr5_2:14577660-14577679 | Msa0759060:CDS | 35.0% |
| !! | TTTTTGAGAGGATGAGTAGT+AGG | - | chr5_2:14577780-14577799 | Msa0759060:intron | 35.0% |
| ! | TTCGTGGAATGCAATGATTT+TGG | - | chr5_2:14577811-14577830 | Msa0759060:intron | 35.0% |
| ! | TCGTGGAATGCAATGATTTT+GGG | - | chr5_2:14577812-14577831 | Msa0759060:intron | 35.0% |
| ! | GTTTGATTTAATGGTTGGGA+TGG | - | chr5_2:14577874-14577893 | Msa0759060:intron | 35.0% |
| CACCAAAAATGAGCGAAATT+CGG | + | chr5_2:14578076-14578095 | None:intergenic | 35.0% | |
| GCAAATCTTCTTGCAAATGT+GGG | - | chr5_2:14578100-14578119 | Msa0759060:intron | 35.0% | |
| CAAATCTTCTTGCAAATGTG+GGG | - | chr5_2:14578101-14578120 | Msa0759060:intron | 35.0% | |
| ! | ATTTGATGGGTATATCTCAC+AGG | - | chr5_2:14578165-14578184 | Msa0759060:intron | 35.0% |
| TTCAAGAGAGATGTGTACTT+AGG | - | chr5_2:14578226-14578245 | Msa0759060:intron | 35.0% | |
| TCAAGAGAGATGTGTACTTA+GGG | - | chr5_2:14578227-14578246 | Msa0759060:intron | 35.0% | |
| ATCCATGTCAACAAGAAGTT+TGG | + | chr5_2:14578263-14578282 | None:intergenic | 35.0% | |
| GATAAGCAGAAACTGGTAAT+AGG | + | chr5_2:14578299-14578318 | None:intergenic | 35.0% | |
| TCTGCTTATCATTTATGCAG+TGG | - | chr5_2:14578309-14578328 | Msa0759060:five_prime_UTR | 35.0% | |
| CTGATGAAGGAAAGAAAGTT+AGG | - | chr5_2:14578367-14578386 | Msa0759060:five_prime_UTR | 35.0% | |
| AGAAAGTTAGGCATAATACC+CGG | - | chr5_2:14578379-14578398 | Msa0759060:five_prime_UTR | 35.0% | |
| !! | TTCTAAGGCTACTTGTCTAA+GGG | + | chr5_2:14578596-14578615 | None:intergenic | 35.0% |
| !! | ATTCTAAGGCTACTTGTCTA+AGG | + | chr5_2:14578597-14578616 | None:intergenic | 35.0% |
| GCATTTGATTGAAATTCCAC+TGG | - | chr5_2:14578872-14578891 | Msa0759060:five_prime_UTR | 35.0% | |
| !! | GAATTGCCATTGTTTTTCTC+TGG | - | chr5_2:14579172-14579191 | Msa0759060:five_prime_UTR | 35.0% |
| GATCTCAGACAAACAATCAA+AGG | + | chr5_2:14579283-14579302 | None:intergenic | 35.0% | |
| GCTACACATTGTAAGAATTC+GGG | - | chr5_2:14579332-14579351 | Msa0759060:five_prime_UTR | 35.0% | |
| AAAAAGAGCAACATCAAACC+TGG | + | chr5_2:14579606-14579625 | None:intergenic | 35.0% | |
| CAATCTTTGTATGCAGGATA+TGG | + | chr5_2:14579684-14579703 | None:intergenic | 35.0% | |
| TGAAGAAGGACAAATATGAG+AGG | + | chr5_2:14579764-14579783 | None:intergenic | 35.0% | |
| AGATTTCAACACTGAATGGA+TGG | + | chr5_2:14579835-14579854 | None:intergenic | 35.0% | |
| ATCGAGATTTCAACACTGAA+TGG | + | chr5_2:14579839-14579858 | None:intergenic | 35.0% | |
| ! | AAAAGAGTACAATCCGACAA+AGG | - | chr5_2:14580038-14580057 | Msa0759060:five_prime_UTR | 35.0% |
| ! | AGGTATTGTTGGAGAAGAAA+GGG | + | chr5_2:14580141-14580160 | None:intergenic | 35.0% |
| !! | AAGGTATTGTTGGAGAAGAA+AGG | + | chr5_2:14580142-14580161 | None:intergenic | 35.0% |
| CTATGACTAGAGGAACTATT+GGG | - | chr5_2:14580208-14580227 | Msa0759060:five_prime_UTR | 35.0% | |
| ! | CTTTCATCAAATAGCCCTTT+TGG | - | chr5_2:14580330-14580349 | Msa0759060:five_prime_UTR | 35.0% |
| !!! | GATATTTTTGGCAAGGATCA+TGG | - | chr5_2:14580609-14580628 | Msa0759060:five_prime_UTR | 35.0% |
| CAATCTCTCTTTAACTCAGA+AGG | + | chr5_2:14580648-14580667 | None:intergenic | 35.0% | |
| CTGAGTTAAAGAGAGATTGT+CGG | - | chr5_2:14580649-14580668 | Msa0759060:five_prime_UTR | 35.0% | |
| !!! | TTTTAACTGTTTTGGGGGGT+TGG | + | chr5_2:14576644-14576663 | None:intergenic | 40.0% |
| TTGAAAGAACTCACCGTAAC+GGG | - | chr5_2:14576681-14576700 | Msa0759060:CDS | 40.0% | |
| !!! | TGGGTTTTGAGATTGAAAGG+TGG | + | chr5_2:14576759-14576778 | None:intergenic | 40.0% |
| GTAGATTCTGGCCATTCATT+TGG | + | chr5_2:14576796-14576815 | None:intergenic | 40.0% | |
| TGAGTTAGGAATTGTGAAGG+TGG | + | chr5_2:14576891-14576910 | None:intergenic | 40.0% | |
| AATTTGAAGAAGGTGGTGAG+TGG | + | chr5_2:14576955-14576974 | None:intergenic | 40.0% | |
| GAAGGGCTTGAATTTGAAGA+AGG | + | chr5_2:14576965-14576984 | None:intergenic | 40.0% | |
| ! | AAAGGGTGCGTGATAAAAAG+GGG | + | chr5_2:14577013-14577032 | None:intergenic | 40.0% |
| ! | GATTAGAAGCACGGCTTAAA+AGG | + | chr5_2:14577031-14577050 | None:intergenic | 40.0% |
| !!! | TGGGGTTGATTTTGTTTTGC+CGG | - | chr5_2:14577301-14577320 | Msa0759060:intron | 40.0% |
| TGAACCAAAGAATTCTCCAC+CGG | + | chr5_2:14577323-14577342 | None:intergenic | 40.0% | |
| TAGGGTGATGTTTGATGGAA+TGG | - | chr5_2:14577376-14577395 | Msa0759060:intron | 40.0% | |
| TGTTTGATGGAATGGTGAGT+CGG | - | chr5_2:14577384-14577403 | Msa0759060:intron | 40.0% | |
| TCGTGGAACTCAATGATTGA+TGG | - | chr5_2:14577416-14577435 | Msa0759060:intron | 40.0% | |
| CGTGGAACTCAATGATTGAT+GGG | - | chr5_2:14577417-14577436 | Msa0759060:intron | 40.0% | |
| TGTTTGATGTAATGCCTGAG+AGG | - | chr5_2:14577477-14577496 | Msa0759060:intron | 40.0% | |
| TGTAATGCCTGAGAGGAATT+TGG | - | chr5_2:14577484-14577503 | Msa0759060:intron | 40.0% | |
| CAAGTAACCAAATTCCTCTC+AGG | + | chr5_2:14577494-14577513 | None:intergenic | 40.0% | |
| CTGAGAGGAATTTGGTTACT+TGG | - | chr5_2:14577492-14577511 | Msa0759060:intron | 40.0% | |
| AACAACTTCAACGCATAACC+AGG | + | chr5_2:14577554-14577573 | None:intergenic | 40.0% | |
| AGTTGTTTAGAGAAATGGGC+AGG | - | chr5_2:14577567-14577586 | Msa0759060:CDS | 40.0% | |
| TGAGAATTAGAGGGAATGCT+AGG | - | chr5_2:14577591-14577610 | Msa0759060:CDS | 40.0% | |
| ! | GACAATGGTTTGTGCAGTTA+CGG | - | chr5_2:14577613-14577632 | Msa0759060:CDS | 40.0% |
| GAGGATGAGTAGTAGGAATT+TGG | - | chr5_2:14577787-14577806 | Msa0759060:intron | 40.0% | |
| ! | GTAGTAGGAATTTGGTTTCG+TGG | - | chr5_2:14577795-14577814 | Msa0759060:intron | 40.0% |
| ! | CGTGGAATGCAATGATTTTG+GGG | - | chr5_2:14577813-14577832 | Msa0759060:intron | 40.0% |
| ATGAAAGTCCAAGTGCAGAT+AGG | - | chr5_2:14577924-14577943 | Msa0759060:intron | 40.0% | |
| TGAAAGTCCAAGTGCAGATA+GGG | - | chr5_2:14577925-14577944 | Msa0759060:intron | 40.0% | |
| ! | AGCCGAATTTCGCTCATTTT+TGG | - | chr5_2:14578071-14578090 | Msa0759060:intron | 40.0% |
| !!! | TTTCGCTCATTTTTGGTGCA+TGG | - | chr5_2:14578078-14578097 | Msa0759060:intron | 40.0% |
| GGCAAATCTTCTTGCAAATG+TGG | - | chr5_2:14578099-14578118 | Msa0759060:intron | 40.0% | |
| TCTCACAGGAGTCATTGTTA+TGG | - | chr5_2:14578179-14578198 | Msa0759060:intron | 40.0% | |
| CTCACAGGAGTCATTGTTAT+GGG | - | chr5_2:14578180-14578199 | Msa0759060:intron | 40.0% | |
| ! | TTGTTATGGGCAAGTTTGCT+CGG | - | chr5_2:14578193-14578212 | Msa0759060:intron | 40.0% |
| CAAGAGAGATGTGTACTTAG+GGG | - | chr5_2:14578228-14578247 | Msa0759060:intron | 40.0% | |
| TGCCAAACTTCTTGTTGACA+TGG | - | chr5_2:14578258-14578277 | Msa0759060:five_prime_UTR | 40.0% | |
| TGGTAATAGGCTAGGTTCTT+AGG | + | chr5_2:14578286-14578305 | None:intergenic | 40.0% | |
| ! | AGGAGTGCAAAAACTGATGA+AGG | - | chr5_2:14578354-14578373 | Msa0759060:five_prime_UTR | 40.0% |
| !! | TGCTGATTCTGGACAATCAT+CGG | - | chr5_2:14578525-14578544 | Msa0759060:five_prime_UTR | 40.0% |
| !! | CTGGTTTTTGCAATTCTCTC+TGG | + | chr5_2:14578555-14578574 | None:intergenic | 40.0% |
| CAGAGAGAATTGCAAAAACC+AGG | - | chr5_2:14578553-14578572 | Msa0759060:five_prime_UTR | 40.0% | |
| AAACAACCACTGAACAACCT+TGG | - | chr5_2:14578664-14578683 | Msa0759060:five_prime_UTR | 40.0% | |
| TTGATTGAAATTCCACTGGG+CGG | - | chr5_2:14578876-14578895 | Msa0759060:five_prime_UTR | 40.0% | |
| CAAACTACCTCTATACCTTG+TGG | + | chr5_2:14579005-14579024 | None:intergenic | 40.0% | |
| !! | GGCCGCATTTCATTTTTCAA+TGG | + | chr5_2:14579045-14579064 | None:intergenic | 40.0% |
| ACACATTGTAAGAATTCGGG+AGG | - | chr5_2:14579335-14579354 | Msa0759060:five_prime_UTR | 40.0% | |
| TTGTATGCAGGATATGGGTT+GGG | + | chr5_2:14579678-14579697 | None:intergenic | 40.0% | |
| TTTGTATGCAGGATATGGGT+TGG | + | chr5_2:14579679-14579698 | None:intergenic | 40.0% | |
| !! | ACAGAATAGGGTGTTGAACT+TGG | + | chr5_2:14579728-14579747 | None:intergenic | 40.0% |
| AGAAGGACAAATATGAGAGG+TGG | + | chr5_2:14579761-14579780 | None:intergenic | 40.0% | |
| ACGGAAAACTCATTTGACGA+AGG | - | chr5_2:14579976-14579995 | Msa0759060:five_prime_UTR | 40.0% | |
| AACTGACCGAAAAATTCCAC+TGG | + | chr5_2:14580083-14580102 | None:intergenic | 40.0% | |
| GGTATTGTTGGAGAAGAAAG+GGG | + | chr5_2:14580140-14580159 | None:intergenic | 40.0% | |
| AATGCTTCTGCTATGACTAG+AGG | - | chr5_2:14580198-14580217 | Msa0759060:five_prime_UTR | 40.0% | |
| GCTATGACTAGAGGAACTAT+TGG | - | chr5_2:14580207-14580226 | Msa0759060:five_prime_UTR | 40.0% | |
| AATGGTTTATCACCAAGGCA+AGG | - | chr5_2:14580450-14580469 | Msa0759060:five_prime_UTR | 40.0% | |
| TGATGAGATTGAGATGGTGA+AGG | - | chr5_2:14580985-14581004 | Msa0759060:five_prime_UTR | 40.0% | |
| TGGATGAACATGCTCATGCT+TGG | + | chr5_2:14576726-14576745 | None:intergenic | 45.0% | |
| AGCATGAGCATGTTCATCCA+TGG | - | chr5_2:14576726-14576745 | Msa0759060:CDS | 45.0% | |
| AAAGTGGCGAGAGTAGATTC+TGG | + | chr5_2:14576808-14576827 | None:intergenic | 45.0% | |
| GGTTACGGAAGGGAAAAAAG+TGG | + | chr5_2:14576824-14576843 | None:intergenic | 45.0% | |
| AAGACGGAGAAGAAGTGATG+GGG | + | chr5_2:14576860-14576879 | None:intergenic | 45.0% | |
| GAAGACGGAGAAGAAGTGAT+GGG | + | chr5_2:14576861-14576880 | None:intergenic | 45.0% | |
| AGAAGACGGAGAAGAAGTGA+TGG | + | chr5_2:14576862-14576881 | None:intergenic | 45.0% | |
| GAAGGTGGTGAAGAAGAAGA+CGG | + | chr5_2:14576876-14576895 | None:intergenic | 45.0% | |
| ! | TGAGTGGTTTGGCAATGAGA+AGG | + | chr5_2:14576939-14576958 | None:intergenic | 45.0% |
| GGGCTTGAATTTGAAGAAGG+TGG | + | chr5_2:14576962-14576981 | None:intergenic | 45.0% | |
| TGCGTGATAAAAAGGGGTTG+CGG | + | chr5_2:14577007-14577026 | None:intergenic | 45.0% | |
| CTGTGCAGAGATTAGAAGCA+CGG | + | chr5_2:14577040-14577059 | None:intergenic | 45.0% | |
| ATGGGCAGGCTGTGAAAAAT+GGG | - | chr5_2:14577282-14577301 | Msa0759060:intron | 45.0% | |
| !!! | GGTTGATTTTGTTTTGCCGG+TGG | - | chr5_2:14577304-14577323 | Msa0759060:intron | 45.0% |
| TTTGCCGGTGGAGAATTCTT+TGG | - | chr5_2:14577316-14577335 | Msa0759060:intron | 45.0% | |
| GTTGCTAGGGTGATGTTTGA+TGG | - | chr5_2:14577371-14577390 | Msa0759060:intron | 45.0% | |
| GTTTGATGGAATGGTGAGTC+GGG | - | chr5_2:14577385-14577404 | Msa0759060:intron | 45.0% | |
| !!! | TTAGTGGGTTTTCGAAGGGT+AGG | - | chr5_2:14577525-14577544 | Msa0759060:intron | 45.0% |
| ! | TTTTCGAAGGGTAGGAATCC+TGG | - | chr5_2:14577533-14577552 | Msa0759060:intron | 45.0% |
| TAGAGGGAATGCTAGGACAA+TGG | - | chr5_2:14577598-14577617 | Msa0759060:CDS | 45.0% | |
| ! | CGGTTCATGGGAGTATGATT+AGG | - | chr5_2:14577672-14577691 | Msa0759060:intron | 45.0% |
| TTGTAAATGCGGGAGAGTTG+AGG | - | chr5_2:14577745-14577764 | Msa0759060:intron | 45.0% | |
| !! | CGGCTAGTGAAGTTTTTGAG+AGG | - | chr5_2:14577768-14577787 | Msa0759060:intron | 45.0% |
| !!! | ATTTTGGGGCATTGCATCCA+TGG | - | chr5_2:14577827-14577846 | Msa0759060:intron | 45.0% |
| !!! | TTTTGGGGCATTGCATCCAT+GGG | - | chr5_2:14577828-14577847 | Msa0759060:intron | 45.0% |
| GAGTGTGAAAGGTGAAGTTG+AGG | - | chr5_2:14577898-14577917 | Msa0759060:intron | 45.0% | |
| GAAAGTCCAAGTGCAGATAG+GGG | - | chr5_2:14577926-14577945 | Msa0759060:intron | 45.0% | |
| AAATGTGGGGCTTATTGACG+AGG | - | chr5_2:14578114-14578133 | Msa0759060:intron | 45.0% | |
| GCAGAAACTGGTAATAGGCT+AGG | + | chr5_2:14578294-14578313 | None:intergenic | 45.0% | |
| TTTATGCAGTGGCTGCTCAA+TGG | - | chr5_2:14578320-14578339 | Msa0759060:five_prime_UTR | 45.0% | |
| TTATGCAGTGGCTGCTCAAT+GGG | - | chr5_2:14578321-14578340 | Msa0759060:five_prime_UTR | 45.0% | |
| GCTCAATGGGAGAATGTTTC+AGG | - | chr5_2:14578334-14578353 | Msa0759060:five_prime_UTR | 45.0% | |
| AATACCCGGAAGCAATCTTG+TGG | - | chr5_2:14578393-14578412 | Msa0759060:five_prime_UTR | 45.0% | |
| AAGTCCACAAGATTGCTTCC+GGG | + | chr5_2:14578400-14578419 | None:intergenic | 45.0% | |
| CAAGTCCACAAGATTGCTTC+CGG | + | chr5_2:14578401-14578420 | None:intergenic | 45.0% | |
| GATTGTCCAGAATCAGCACA+AGG | + | chr5_2:14578523-14578542 | None:intergenic | 45.0% | |
| TGATTCTGGACAATCATCGG+TGG | - | chr5_2:14578528-14578547 | Msa0759060:five_prime_UTR | 45.0% | |
| AGGTAGCTGCAAGTTTCTCA+TGG | - | chr5_2:14578704-14578723 | Msa0759060:five_prime_UTR | 45.0% | |
| GGTAGCTGCAAGTTTCTCAT+GGG | - | chr5_2:14578705-14578724 | Msa0759060:five_prime_UTR | 45.0% | |
| GTAGCTGCAAGTTTCTCATG+GGG | - | chr5_2:14578706-14578725 | Msa0759060:five_prime_UTR | 45.0% | |
| !! | TTTCTCATGGGGCATCGATA+CGG | - | chr5_2:14578717-14578736 | Msa0759060:five_prime_UTR | 45.0% |
| AAAACGCCATGCACCAGAAT+CGG | + | chr5_2:14578904-14578923 | None:intergenic | 45.0% | |
| ! | GATTTTGTGCCAATGCTGTC+AGG | - | chr5_2:14579105-14579124 | Msa0759060:five_prime_UTR | 45.0% |
| TCAACGTTTCCTGACAGCAT+TGG | + | chr5_2:14579117-14579136 | None:intergenic | 45.0% | |
| ! | TGTTTGTCTGAGATCGTTCC+TGG | - | chr5_2:14579288-14579307 | Msa0759060:five_prime_UTR | 45.0% |
| ! | GTTTGTCTGAGATCGTTCCT+GGG | - | chr5_2:14579289-14579308 | Msa0759060:five_prime_UTR | 45.0% |
| TCAACATTAGCATCACCACC+AGG | - | chr5_2:14579585-14579604 | Msa0759060:five_prime_UTR | 45.0% | |
| AAGAGCAACATCAAACCTGG+TGG | + | chr5_2:14579603-14579622 | None:intergenic | 45.0% | |
| !! | CAGGATATGGGTTGGGTTTA+TGG | + | chr5_2:14579671-14579690 | None:intergenic | 45.0% |
| TCCGACAAAGGAACAAGAGA+CGG | - | chr5_2:14580050-14580069 | Msa0759060:five_prime_UTR | 45.0% | |
| GGAACTATTGGGTTTGTGCA+TGG | - | chr5_2:14580219-14580238 | Msa0759060:five_prime_UTR | 45.0% | |
| TTTATCACCAAGGCAAGGAC+TGG | - | chr5_2:14580455-14580474 | Msa0759060:five_prime_UTR | 45.0% | |
| GACAGAGTTTGTGCACTTTC+TGG | - | chr5_2:14580950-14580969 | Msa0759060:five_prime_UTR | 45.0% | |
| TGGTGAAGGCAAGAAACAGA+AGG | - | chr5_2:14580999-14581018 | Msa0759060:five_prime_UTR | 45.0% | |
| GGTGAAGGCAAGAAACAGAA+GGG | - | chr5_2:14581000-14581019 | Msa0759060:five_prime_UTR | 45.0% | |
| TGAAAGGTGGTGAATCGCCA+TGG | + | chr5_2:14576746-14576765 | None:intergenic | 50.0% | |
| GAGAAGAAGGGGTTACGGAA+GGG | + | chr5_2:14576834-14576853 | None:intergenic | 50.0% | |
| TGAGAAGAAGGGGTTACGGA+AGG | + | chr5_2:14576835-14576854 | None:intergenic | 50.0% | |
| GAAGAAGGTGGTGAGTGGTT+TGG | + | chr5_2:14576950-14576969 | None:intergenic | 50.0% | |
| TGGTAGAATGTGTCATGGGC+AGG | - | chr5_2:14577268-14577287 | Msa0759060:intron | 50.0% | |
| CATGGGCAGGCTGTGAAAAA+TGG | - | chr5_2:14577281-14577300 | Msa0759060:intron | 50.0% | |
| TGGGCAGGCTGTGAAAAATG+GGG | - | chr5_2:14577283-14577302 | Msa0759060:intron | 50.0% | |
| TGGTTCTTGTGGGGATGTAC+TGG | - | chr5_2:14577349-14577368 | Msa0759060:intron | 50.0% | |
| !! | TGGGGATGTACTGGTTGCTA+GGG | - | chr5_2:14577358-14577377 | Msa0759060:intron | 50.0% |
| TGGAATGGTGAGTCGGGATT+TGG | - | chr5_2:14577391-14577410 | Msa0759060:intron | 50.0% | |
| ! | TGAGTCGGGATTTGGTTTCG+TGG | - | chr5_2:14577399-14577418 | Msa0759060:intron | 50.0% |
| ATGGGCAGGCTGAGAATTAG+AGG | - | chr5_2:14577581-14577600 | Msa0759060:CDS | 50.0% | |
| TGGGCAGGCTGAGAATTAGA+GGG | - | chr5_2:14577582-14577601 | Msa0759060:CDS | 50.0% | |
| GTTTGTGCAGTTACGGCTTG+TGG | - | chr5_2:14577620-14577639 | Msa0759060:CDS | 50.0% | |
| CGGTCGGGTAGACTTAAAGA+AGG | - | chr5_2:14577644-14577663 | Msa0759060:CDS | 50.0% | |
| TAAATGCGGGAGAGTTGAGG+CGG | - | chr5_2:14577748-14577767 | Msa0759060:intron | 50.0% | |
| TTGCATCCATGGGAATCCTG+AGG | - | chr5_2:14577838-14577857 | Msa0759060:intron | 50.0% | |
| ATCCATGGGAATCCTGAGGA+TGG | - | chr5_2:14577842-14577861 | Msa0759060:intron | 50.0% | |
| AACAAGCTCAGTCCATCCTC+AGG | + | chr5_2:14577857-14577876 | None:intergenic | 50.0% | |
| ! | GTTGGGATGGAGAGTGTGAA+AGG | - | chr5_2:14577887-14577906 | Msa0759060:intron | 50.0% |
| TCCAAGTGCAGATAGGGGTT+TGG | - | chr5_2:14577931-14577950 | Msa0759060:intron | 50.0% | |
| ACCAAACCCCTATCTGCACT+TGG | + | chr5_2:14577935-14577954 | None:intergenic | 50.0% | |
| GCATTCTTTGTGCGTGTGCT+CGG | - | chr5_2:14577987-14578006 | Msa0759060:intron | 50.0% | |
| CATTCTTTGTGCGTGTGCTC+GGG | - | chr5_2:14577988-14578007 | Msa0759060:intron | 50.0% | |
| CAACCACTGAACAACCTTGG+AGG | - | chr5_2:14578667-14578686 | Msa0759060:five_prime_UTR | 50.0% | |
| GATCCTCCAAGGTTGTTCAG+TGG | + | chr5_2:14578673-14578692 | None:intergenic | 50.0% | |
| AAAGACAGCTGCTGACACGA+AGG | + | chr5_2:14579148-14579167 | None:intergenic | 50.0% | |
| GATGGTGCTCATCGATGAGA+AGG | - | chr5_2:14579398-14579417 | Msa0759060:five_prime_UTR | 50.0% | |
| AGAGAGTCGACAAGAGCAAG+AGG | - | chr5_2:14580008-14580027 | Msa0759060:five_prime_UTR | 50.0% | |
| CCCGTCTCTTGTTCCTTTGT+CGG | + | chr5_2:14580054-14580073 | None:intergenic | 50.0% | |
| CCGACAAAGGAACAAGAGAC+GGG | - | chr5_2:14580051-14580070 | Msa0759060:five_prime_UTR | 50.0% | |
| AAGAGACGGGAAAACACCAG+TGG | - | chr5_2:14580064-14580083 | Msa0759060:five_prime_UTR | 50.0% | |
| TAAGGATCCAGTCCTTGCCT+TGG | + | chr5_2:14580465-14580484 | None:intergenic | 50.0% | |
| !! | AGAACTCACCGTAACGGGTG+CGG | - | chr5_2:14576686-14576705 | Msa0759060:CDS | 55.0% |
| GGCGTGAGAAGAAGGGGTTA+CGG | + | chr5_2:14576839-14576858 | None:intergenic | 55.0% | |
| TGATGGGGCGTGAGAAGAAG+GGG | + | chr5_2:14576845-14576864 | None:intergenic | 55.0% | |
| ! | GTGATGGGGCGTGAGAAGAA+GGG | + | chr5_2:14576846-14576865 | None:intergenic | 55.0% |
| ! | AGTGATGGGGCGTGAGAAGA+AGG | + | chr5_2:14576847-14576866 | None:intergenic | 55.0% |
| !! | GTGGGGATGTACTGGTTGCT+AGG | - | chr5_2:14577357-14577376 | Msa0759060:intron | 55.0% |
| GTGCAGTTACGGCTTGTGGT+CGG | - | chr5_2:14577624-14577643 | Msa0759060:CDS | 55.0% | |
| AGTTACGGCTTGTGGTCGGT+CGG | - | chr5_2:14577628-14577647 | Msa0759060:CDS | 55.0% | |
| GTCCATCCTCAGGATTCCCA+TGG | + | chr5_2:14577847-14577866 | None:intergenic | 55.0% | |
| !! | GTGCAGATAGGGGTTTGGTG+AGG | - | chr5_2:14577936-14577955 | Msa0759060:intron | 55.0% |
| CGGAACTGTTGAGTGAAGGC+AGG | - | chr5_2:14578011-14578030 | Msa0759060:intron | 55.0% | |
| GTGTCAAACAATCGGCGCGA+AGG | - | chr5_2:14578445-14578464 | Msa0759060:five_prime_UTR | 55.0% | |
| !! | GGGTTGCCTTGTGCTGATTC+TGG | - | chr5_2:14578514-14578533 | Msa0759060:five_prime_UTR | 55.0% |
| ! | ATTCTGTGGGCACTGCCACA+AGG | - | chr5_2:14578987-14579006 | Msa0759060:five_prime_UTR | 55.0% |
| GGCACTGCCACAAGGTATAG+AGG | - | chr5_2:14578995-14579014 | Msa0759060:five_prime_UTR | 55.0% | |
| TCGTTCCTGGGAAAGATGCG+TGG | - | chr5_2:14579301-14579320 | Msa0759060:five_prime_UTR | 55.0% | |
| TTCCTGGGAAAGATGCGTGG+AGG | - | chr5_2:14579304-14579323 | Msa0759060:five_prime_UTR | 55.0% | |
| ATCCTCCACGCATCTTTCCC+AGG | + | chr5_2:14579309-14579328 | None:intergenic | 55.0% | |
| GATGCACACCGCACCCGTTA+CGG | + | chr5_2:14576697-14576716 | None:intergenic | 60.0% | |
| GTTACGGCTTGTGGTCGGTC+GGG | - | chr5_2:14577629-14577648 | Msa0759060:CDS | 60.0% | |
| TCTTTGTGCGTGTGCTCGGG+CGG | - | chr5_2:14577991-14578010 | Msa0759060:intron | 60.0% | |
| CGGGCGGAACTGTTGAGTGA+AGG | - | chr5_2:14578007-14578026 | Msa0759060:intron | 60.0% | |
| GCGGCTCCGATTCTGGTGCA+TGG | - | chr5_2:14578895-14578914 | Msa0759060:five_prime_UTR | 65.0% | |
| CCAGAATCGGAGCCGCCCAG+TGG | + | chr5_2:14578891-14578910 | None:intergenic | 70.0% | |
| CCACTGGGCGGCTCCGATTC+TGG | - | chr5_2:14578888-14578907 | Msa0759060:five_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 14576630 | 14581027 | 14576630 | ID=Msa0759060;Name=Msa0759060 |
| chr5_2 | mRNA | 14576630 | 14581027 | 14576630 | ID=Msa0759060-mRNA-1;Parent=Msa0759060;Name=Msa0759060-mRNA-1;_AED=0.07;_eAED=0.10;_QI=2782|0|0.66|1|0|0.66|3|0|102 |
| chr5_2 | exon | 14576630 | 14576810 | 14576630 | ID=Msa0759060-mRNA-1:exon:6619;Parent=Msa0759060-mRNA-1 |
| chr5_2 | exon | 14577562 | 14577681 | 14577562 | ID=Msa0759060-mRNA-1:exon:6618;Parent=Msa0759060-mRNA-1 |
| chr5_2 | exon | 14578238 | 14581027 | 14578238 | ID=Msa0759060-mRNA-1:exon:6617;Parent=Msa0759060-mRNA-1 |
| chr5_2 | five_prime_UTR | 14578246 | 14581027 | 14578246 | ID=Msa0759060-mRNA-1:five_prime_utr;Parent=Msa0759060-mRNA-1 |
| chr5_2 | CDS | 14578238 | 14578245 | 14578238 | ID=Msa0759060-mRNA-1:cds;Parent=Msa0759060-mRNA-1 |
| chr5_2 | CDS | 14577562 | 14577681 | 14577562 | ID=Msa0759060-mRNA-1:cds;Parent=Msa0759060-mRNA-1 |
| chr5_2 | CDS | 14576630 | 14576810 | 14576630 | ID=Msa0759060-mRNA-1:cds;Parent=Msa0759060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
