Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0800380 | AES95186.1 | 80.519 | 77 | 1 | 1 | 4 | 66 | 588 | 664 | 1.91e-31 | 127 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0800380 | sp|Q0WV12|ANL2_ARATH | 45.000 | 80 | 40 | 1 | 5 | 84 | 190 | 265 | 1.18e-14 | 71.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0800380 | G7JXL5 | 80.519 | 77 | 1 | 1 | 4 | 66 | 588 | 664 | 9.13e-32 | 127 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0800380 | 0.812689 | 3.736786e-51 | -8.615850e-47 |
| Msa0006110 | Msa0800380 | 0.804735 | 1.872856e-49 | -8.615850e-47 |
| Msa0008670 | Msa0800380 | 0.818384 | 2.016612e-52 | -8.615850e-47 |
| Msa0012080 | Msa0800380 | 0.810860 | 9.341709e-51 | -8.615850e-47 |
| Msa0015390 | Msa0800380 | 0.803091 | 4.113578e-49 | -8.615850e-47 |
| Msa0017510 | Msa0800380 | 0.843221 | 1.601355e-58 | -8.615850e-47 |
| Msa0024210 | Msa0800380 | -0.818504 | 1.893673e-52 | -8.615850e-47 |
| Msa0027230 | Msa0800380 | 0.812440 | 4.235846e-51 | -8.615850e-47 |
| Msa0028640 | Msa0800380 | 0.812305 | 4.533843e-51 | -8.615850e-47 |
| Msa0050390 | Msa0800380 | 0.846265 | 2.421762e-59 | -8.615850e-47 |
| Msa0052730 | Msa0800380 | 0.802736 | 4.869783e-49 | -8.615850e-47 |
| Msa0054480 | Msa0800380 | 0.818604 | 1.797795e-52 | -8.615850e-47 |
| Msa0061080 | Msa0800380 | 0.819687 | 1.018994e-52 | -8.615850e-47 |
| Msa0074240 | Msa0800380 | 0.808041 | 3.763809e-50 | -8.615850e-47 |
| Msa0075220 | Msa0800380 | 0.823610 | 1.262428e-53 | -8.615850e-47 |
| Msa0078900 | Msa0800380 | 0.806937 | 6.453349e-50 | -8.615850e-47 |
| Msa0090360 | Msa0800380 | 0.805730 | 1.159496e-49 | -8.615850e-47 |
| Msa0097810 | Msa0800380 | 0.807100 | 5.962078e-50 | -8.615850e-47 |
| Msa0101810 | Msa0800380 | -0.821990 | 3.009324e-53 | -8.615850e-47 |
| Msa0110970 | Msa0800380 | 0.810954 | 8.914323e-51 | -8.615850e-47 |
| Msa0116770 | Msa0800380 | 0.805802 | 1.119583e-49 | -8.615850e-47 |
| Msa0120010 | Msa0800380 | -0.808921 | 2.441681e-50 | -8.615850e-47 |
| Msa0120020 | Msa0800380 | -0.818390 | 2.009728e-52 | -8.615850e-47 |
| Msa0610430 | Msa0800380 | 0.830129 | 3.493549e-55 | -8.615850e-47 |
| Msa0617640 | Msa0800380 | 0.804418 | 2.180810e-49 | -8.615850e-47 |
| Msa0625720 | Msa0800380 | 0.811167 | 8.015736e-51 | -8.615850e-47 |
| Msa0663390 | Msa0800380 | 0.823726 | 1.185835e-53 | -8.615850e-47 |
| Msa0669320 | Msa0800380 | 0.807935 | 3.963965e-50 | -8.615850e-47 |
| Msa0677290 | Msa0800380 | 0.803672 | 3.117397e-49 | -8.615850e-47 |
| Msa0680200 | Msa0800380 | 0.819222 | 1.300977e-52 | -8.615850e-47 |
| Msa0689260 | Msa0800380 | 0.801770 | 7.698342e-49 | -8.615850e-47 |
| Msa0691380 | Msa0800380 | 0.817746 | 2.809689e-52 | -8.615850e-47 |
| Msa0698920 | Msa0800380 | 0.828798 | 7.356907e-55 | -8.615850e-47 |
| Msa0703050 | Msa0800380 | 0.807930 | 3.973523e-50 | -8.615850e-47 |
| Msa0709500 | Msa0800380 | 0.800854 | 1.185589e-48 | -8.615850e-47 |
| Msa0711790 | Msa0800380 | 0.813621 | 2.332750e-51 | -8.615850e-47 |
| Msa0715700 | Msa0800380 | 0.803812 | 2.914966e-49 | -8.615850e-47 |
| Msa0731940 | Msa0800380 | 0.812959 | 3.260543e-51 | -8.615850e-47 |
| Msa0735170 | Msa0800380 | 0.800291 | 1.544261e-48 | -8.615850e-47 |
| Msa0743720 | Msa0800380 | 0.820833 | 5.566599e-53 | -8.615850e-47 |
| Msa0745790 | Msa0800380 | 0.810083 | 1.375066e-50 | -8.615850e-47 |
| Msa0756630 | Msa0800380 | -0.818111 | 2.324268e-52 | -8.615850e-47 |
| Msa0757450 | Msa0800380 | -0.818041 | 2.411206e-52 | -8.615850e-47 |
| Msa0757500 | Msa0800380 | -0.823066 | 1.692120e-53 | -8.615850e-47 |
| Msa0759060 | Msa0800380 | 0.817671 | 2.921963e-52 | -8.615850e-47 |
| Msa0762970 | Msa0800380 | 0.804208 | 2.412097e-49 | -8.615850e-47 |
| Msa0793800 | Msa0800380 | 0.845414 | 4.123303e-59 | -8.615850e-47 |
| Msa0796530 | Msa0800380 | 0.800274 | 1.556669e-48 | -8.615850e-47 |
| Msa0800380 | Msa0810220 | 0.821629 | 3.647335e-53 | -8.615850e-47 |
| Msa0800380 | Msa0813740 | 0.802263 | 6.094934e-49 | -8.615850e-47 |
| Msa0800380 | Msa0822870 | 0.810794 | 9.654765e-51 | -8.615850e-47 |
| Msa0800380 | Msa0824680 | 0.810245 | 1.268662e-50 | -8.615850e-47 |
| Msa0800380 | Msa0827040 | 0.820674 | 6.056003e-53 | -8.615850e-47 |
| Msa0800380 | Msa0828560 | 0.826734 | 2.305694e-54 | -8.615850e-47 |
| Msa0800380 | Msa0830530 | 0.816850 | 4.470330e-52 | -8.615850e-47 |
| Msa0800380 | Msa0831530 | 0.813740 | 2.196822e-51 | -8.615850e-47 |
| Msa0800380 | Msa0834770 | 0.800580 | 1.348061e-48 | -8.615850e-47 |
| Msa0800380 | Msa0838380 | 0.801765 | 7.716135e-49 | -8.615850e-47 |
| Msa0800380 | Msa0838580 | 0.816892 | 4.375310e-52 | -8.615850e-47 |
| Msa0800380 | Msa0844570 | 0.801298 | 9.619582e-49 | -8.615850e-47 |
| Msa0800380 | Msa0850960 | 0.800649 | 1.305385e-48 | -8.615850e-47 |
| Msa0800380 | Msa0861510 | 0.808332 | 3.262879e-50 | -8.615850e-47 |
| Msa0800380 | Msa0861530 | 0.801161 | 1.025974e-48 | -8.615850e-47 |
| Msa0800380 | Msa0861600 | 0.804646 | 1.954524e-49 | -8.615850e-47 |
| Msa0800380 | Msa0861930 | 0.804589 | 2.008915e-49 | -8.615850e-47 |
| Msa0800380 | Msa0871270 | 0.800027 | 1.747304e-48 | -8.615850e-47 |
| Msa0800380 | Msa0876190 | 0.806794 | 6.918356e-50 | -8.615850e-47 |
| Msa0800380 | Msa0876200 | 0.801447 | 8.965105e-49 | -8.615850e-47 |
| Msa0800380 | Msa0880140 | 0.842840 | 2.022850e-58 | -8.615850e-47 |
| Msa0800380 | Msa0896750 | 0.801709 | 7.923966e-49 | -8.615850e-47 |
| Msa0800380 | Msa0908050 | 0.806636 | 7.473091e-50 | -8.615850e-47 |
| Msa0800380 | Msa0930780 | 0.814079 | 1.849044e-51 | -8.615850e-47 |
| Msa0800380 | Msa0933100 | 0.804839 | 1.781681e-49 | -8.615850e-47 |
| Msa0800380 | Msa0936340 | 0.800154 | 1.646393e-48 | -8.615850e-47 |
| Msa0800380 | Msa0938220 | 0.812071 | 5.097292e-51 | -8.615850e-47 |
| Msa0800380 | Msa0947660 | 0.809780 | 1.598044e-50 | -8.615850e-47 |
| Msa0800380 | Msa0959360 | 0.801122 | 1.045009e-48 | -8.615850e-47 |
| Msa0800380 | Msa0968680 | 0.827078 | 1.908472e-54 | -8.615850e-47 |
| Msa0800380 | Msa0969520 | 0.812089 | 5.051593e-51 | -8.615850e-47 |
| Msa0800380 | Msa0974070 | 0.807432 | 5.068716e-50 | -8.615850e-47 |
| Msa0800380 | Msa1003620 | 0.810488 | 1.124469e-50 | -8.615850e-47 |
| Msa0800380 | Msa1014540 | 0.808699 | 2.724741e-50 | -8.615850e-47 |
| Msa0800380 | Msa1023920 | 0.801249 | 9.844927e-49 | -8.615850e-47 |
| Msa0800380 | Msa1046460 | 0.802990 | 4.316636e-49 | -8.615850e-47 |
| Msa0800380 | Msa1051200 | 0.802656 | 5.057994e-49 | -8.615850e-47 |
| Msa0800380 | Msa1075540 | 0.815780 | 7.756331e-52 | -8.615850e-47 |
| Msa0800380 | Msa1081330 | 0.810183 | 1.308475e-50 | -8.615850e-47 |
| Msa0800380 | Msa1093530 | 0.801648 | 8.153392e-49 | -8.615850e-47 |
| Msa0800380 | Msa1093840 | 0.823870 | 1.097062e-53 | -8.615850e-47 |
| Msa0800380 | Msa1100050 | 0.803714 | 3.055165e-49 | -8.615850e-47 |
| Msa0800380 | Msa1106700 | 0.811377 | 7.218384e-51 | -8.615850e-47 |
| Msa0800380 | Msa1107900 | 0.804317 | 2.289357e-49 | -8.615850e-47 |
| Msa0800380 | Msa1108160 | 0.810951 | 8.927995e-51 | -8.615850e-47 |
| Msa0800380 | Msa1123380 | 0.824397 | 8.253272e-54 | -8.615850e-47 |
| Msa0800380 | Msa1125760 | 0.802938 | 4.423634e-49 | -8.615850e-47 |
| Msa0800380 | Msa1137570 | 0.834777 | 2.463452e-56 | -8.615850e-47 |
| Msa0800380 | Msa1140690 | 0.809251 | 2.074798e-50 | -8.615850e-47 |
| Msa0800380 | Msa1144890 | 0.801953 | 7.058061e-49 | -8.615850e-47 |
| Msa0800380 | Msa1147900 | 0.854972 | 8.617715e-62 | -8.615850e-47 |
| Msa0800380 | Msa1154030 | 0.802923 | 4.455406e-49 | -8.615850e-47 |
| Msa0800380 | Msa1154280 | 0.802612 | 5.166245e-49 | -8.615850e-47 |
| Msa0800380 | Msa1169550 | 0.808954 | 2.402886e-50 | -8.615850e-47 |
| Msa0800380 | Msa1171360 | 0.802664 | 5.038408e-49 | -8.615850e-47 |
| Msa0800380 | Msa1173100 | 0.810632 | 1.046641e-50 | -8.615850e-47 |
| Msa0800380 | Msa1186950 | -0.808846 | 2.533502e-50 | -8.615850e-47 |
| Msa0800380 | Msa1193290 | 0.845166 | 4.812369e-59 | -8.615850e-47 |
| Msa0800380 | Msa1201650 | 0.800847 | 1.189290e-48 | -8.615850e-47 |
| Msa0800380 | Msa1208880 | 0.813569 | 2.394748e-51 | -8.615850e-47 |
| Msa0800380 | Msa1214890 | 0.808897 | 2.471405e-50 | -8.615850e-47 |
| Msa0800380 | Msa1218280 | -0.804629 | 1.970559e-49 | -8.615850e-47 |
| Msa0800380 | Msa1221060 | 0.806256 | 8.984391e-50 | -8.615850e-47 |
| Msa0800380 | Msa1228620 | -0.803274 | 3.769600e-49 | -8.615850e-47 |
| Msa0800380 | Msa1231790 | 0.815729 | 7.961675e-52 | -8.615850e-47 |
| Msa0800380 | Msa1245930 | 0.806511 | 7.938919e-50 | -8.615850e-47 |
| Msa0800380 | Msa1253020 | 0.808210 | 3.463954e-50 | -8.615850e-47 |
| Msa0800380 | Msa1277660 | 0.809376 | 1.951028e-50 | -8.615850e-47 |
| Msa0800380 | Msa1283840 | 0.804039 | 2.615517e-49 | -8.615850e-47 |
| Msa0800380 | Msa1284260 | 0.821402 | 4.115773e-53 | -8.615850e-47 |
| Msa0800380 | Msa1287460 | 0.802928 | 4.444500e-49 | -8.615850e-47 |
| Msa0800380 | Msa1300490 | 0.809981 | 1.446053e-50 | -8.615850e-47 |
| Msa0800380 | Msa1303240 | 0.813827 | 2.101446e-51 | -8.615850e-47 |
| Msa0800380 | Msa1303250 | 0.843296 | 1.528718e-58 | -8.615850e-47 |
| Msa0800380 | Msa1306840 | 0.807234 | 5.583758e-50 | -8.615850e-47 |
| Msa0800380 | Msa1306850 | 0.801481 | 8.823521e-49 | -8.615850e-47 |
| Msa0800380 | Msa1317980 | 0.817355 | 3.442049e-52 | -8.615850e-47 |
| Msa0800380 | Msa1320740 | 0.805360 | 1.385766e-49 | -8.615850e-47 |
| Msa0800380 | Msa1322860 | 0.807138 | 5.850681e-50 | -8.615850e-47 |
| Msa0800380 | Msa1327050 | 0.815359 | 9.624023e-52 | -8.615850e-47 |
| Msa0800380 | Msa1327680 | 0.800911 | 1.154201e-48 | -8.615850e-47 |
| Msa0800380 | Msa1336570 | 0.993304 | 8.171451e-199 | -8.615850e-47 |
| Msa0800380 | Msa1346370 | 0.811192 | 7.918394e-51 | -8.615850e-47 |
| Msa0800380 | Msa1348490 | 0.818833 | 1.594384e-52 | -8.615850e-47 |
| Msa0800380 | Msa1357240 | 0.826001 | 3.446170e-54 | -8.615850e-47 |
| Msa0800380 | Msa1358250 | 0.801619 | 8.265712e-49 | -8.615850e-47 |
| Msa0800380 | Msa1359040 | 0.833531 | 5.054536e-56 | -8.615850e-47 |
| Msa0800380 | Msa1361400 | 0.809828 | 1.560433e-50 | -8.615850e-47 |
| Msa0800380 | Msa1372760 | 0.819919 | 9.017632e-53 | -8.615850e-47 |
| Msa0800380 | Msa1374550 | 0.825009 | 5.920105e-54 | -8.615850e-47 |
| Msa0800380 | Msa1382560 | 0.807202 | 5.672411e-50 | -8.615850e-47 |
| Msa0800380 | Msa1389800 | 0.805383 | 1.370910e-49 | -8.615850e-47 |
| Msa0800380 | Msa1392780 | 0.816613 | 5.053174e-52 | -8.615850e-47 |
| Msa0800380 | Msa1402400 | 0.802591 | 5.217885e-49 | -8.615850e-47 |
| Msa0800380 | Msa1408620 | -0.814045 | 1.881269e-51 | -8.615850e-47 |
| Msa0800380 | Msa1410100 | 0.800245 | 1.577643e-48 | -8.615850e-47 |
| Msa0800380 | Msa1416150 | 0.814639 | 1.390667e-51 | -8.615850e-47 |
| Msa0800380 | Msa1423350 | 0.813330 | 2.703302e-51 | -8.615850e-47 |
| Msa0800380 | Msa1448640 | 0.803856 | 2.855023e-49 | -8.615850e-47 |
| Msa0800380 | Msa1451160 | 0.816605 | 5.074077e-52 | -8.615850e-47 |
| Msa0800380 | Msa1461300 | 0.823855 | 1.106176e-53 | -8.615850e-47 |
| Msa0800380 | Msa1466540 | 0.833657 | 4.702369e-56 | -8.615850e-47 |
| Msa0144540 | Msa0800380 | 0.806125 | 9.572739e-50 | -8.615850e-47 |
| Msa0150820 | Msa0800380 | 0.816285 | 5.982917e-52 | -8.615850e-47 |
| Msa0157290 | Msa0800380 | 0.844240 | 8.543844e-59 | -8.615850e-47 |
| Msa0160550 | Msa0800380 | 0.809769 | 1.606688e-50 | -8.615850e-47 |
| Msa0166560 | Msa0800380 | 0.806802 | 6.892944e-50 | -8.615850e-47 |
| Msa0168500 | Msa0800380 | 0.804339 | 2.265689e-49 | -8.615850e-47 |
| Msa0169310 | Msa0800380 | 0.802064 | 6.696583e-49 | -8.615850e-47 |
| Msa0171540 | Msa0800380 | 0.806734 | 7.124963e-50 | -8.615850e-47 |
| Msa0184040 | Msa0800380 | 0.801160 | 1.026553e-48 | -8.615850e-47 |
| Msa0187120 | Msa0800380 | 0.836234 | 1.054419e-56 | -8.615850e-47 |
| Msa0195000 | Msa0800380 | 0.818207 | 2.210490e-52 | -8.615850e-47 |
| Msa0197420 | Msa0800380 | 0.819031 | 1.437948e-52 | -8.615850e-47 |
| Msa0197930 | Msa0800380 | 0.814238 | 1.705807e-51 | -8.615850e-47 |
| Msa0212930 | Msa0800380 | 0.809835 | 1.554642e-50 | -8.615850e-47 |
| Msa0212990 | Msa0800380 | 0.803716 | 3.052408e-49 | -8.615850e-47 |
| Msa0215320 | Msa0800380 | -0.833798 | 4.334744e-56 | -8.615850e-47 |
| Msa0228070 | Msa0800380 | 0.806372 | 8.494146e-50 | -8.615850e-47 |
| Msa0237070 | Msa0800380 | 0.806855 | 6.716536e-50 | -8.615850e-47 |
| Msa0366240 | Msa0800380 | 0.803320 | 3.687468e-49 | -8.615850e-47 |
| Msa0376350 | Msa0800380 | 0.806117 | 9.612537e-50 | -8.615850e-47 |
| Msa0383500 | Msa0800380 | 0.818814 | 1.610430e-52 | -8.615850e-47 |
| Msa0395790 | Msa0800380 | 0.829316 | 5.511723e-55 | -8.615850e-47 |
| Msa0410500 | Msa0800380 | 0.801080 | 1.065953e-48 | -8.615850e-47 |
| Msa0410650 | Msa0800380 | 0.800271 | 1.558445e-48 | -8.615850e-47 |
| Msa0419820 | Msa0800380 | 0.817739 | 2.820326e-52 | -8.615850e-47 |
| Msa0464680 | Msa0800380 | 0.806062 | 9.871171e-50 | -8.615850e-47 |
| Msa0466390 | Msa0800380 | 0.810166 | 1.319153e-50 | -8.615850e-47 |
| Msa0475790 | Msa0800380 | 0.810565 | 1.082217e-50 | -8.615850e-47 |
| Msa0480980 | Msa0800380 | 0.800540 | 1.374023e-48 | -8.615850e-47 |
| Msa0481530 | Msa0800380 | 0.808594 | 2.868759e-50 | -8.615850e-47 |
| Msa0243100 | Msa0800380 | 0.801479 | 8.832335e-49 | -8.615850e-47 |
| Msa0253200 | Msa0800380 | 0.816678 | 4.885214e-52 | -8.615850e-47 |
| Msa0257460 | Msa0800380 | 0.802136 | 6.473600e-49 | -8.615850e-47 |
| Msa0259370 | Msa0800380 | 0.800329 | 1.516850e-48 | -8.615850e-47 |
| Msa0261340 | Msa0800380 | 0.820208 | 7.742760e-53 | -8.615850e-47 |
| Msa0262340 | Msa0800380 | 0.807798 | 4.238038e-50 | -8.615850e-47 |
| Msa0264150 | Msa0800380 | 0.835658 | 1.476028e-56 | -8.615850e-47 |
| Msa0271530 | Msa0800380 | 0.827190 | 1.793412e-54 | -8.615850e-47 |
| Msa0279790 | Msa0800380 | 0.825845 | 3.754212e-54 | -8.615850e-47 |
| Msa0284410 | Msa0800380 | 0.800385 | 1.477138e-48 | -8.615850e-47 |
| Msa0285170 | Msa0800380 | 0.818468 | 1.930122e-52 | -8.615850e-47 |
| Msa0287650 | Msa0800380 | 0.820472 | 6.736781e-53 | -8.615850e-47 |
| Msa0292030 | Msa0800380 | 0.819950 | 8.872266e-53 | -8.615850e-47 |
| Msa0294560 | Msa0800380 | -0.816122 | 6.506296e-52 | -8.615850e-47 |
| Msa0300690 | Msa0800380 | 0.817075 | 3.979596e-52 | -8.615850e-47 |
| Msa0316810 | Msa0800380 | 0.813610 | 2.345986e-51 | -8.615850e-47 |
| Msa0321860 | Msa0800380 | 0.806758 | 7.042270e-50 | -8.615850e-47 |
| Msa0336420 | Msa0800380 | 0.827971 | 1.164783e-54 | -8.615850e-47 |
| Msa0337620 | Msa0800380 | 0.816284 | 5.986262e-52 | -8.615850e-47 |
| Msa0339250 | Msa0800380 | 0.820582 | 6.355070e-53 | -8.615850e-47 |
| Msa0345970 | Msa0800380 | 0.806487 | 8.034201e-50 | -8.615850e-47 |
| Msa0363070 | Msa0800380 | 0.813345 | 2.683125e-51 | -8.615850e-47 |
| Msa0483850 | Msa0800380 | 0.800087 | 1.698951e-48 | -8.615850e-47 |
| Msa0488560 | Msa0800380 | 0.811847 | 5.703602e-51 | -8.615850e-47 |
| Msa0498060 | Msa0800380 | 0.813866 | 2.060838e-51 | -8.615850e-47 |
| Msa0516170 | Msa0800380 | 0.801548 | 8.549449e-49 | -8.615850e-47 |
| Msa0529040 | Msa0800380 | 0.800609 | 1.330123e-48 | -8.615850e-47 |
| Msa0529890 | Msa0800380 | 0.812393 | 4.337305e-51 | -8.615850e-47 |
| Msa0563840 | Msa0800380 | 0.804687 | 1.916313e-49 | -8.615850e-47 |
| Msa0574890 | Msa0800380 | 0.804054 | 2.597275e-49 | -8.615850e-47 |
| Msa0576690 | Msa0800380 | 0.803791 | 2.944983e-49 | -8.615850e-47 |
| Msa0577500 | Msa0800380 | 0.806219 | 9.149352e-50 | -8.615850e-47 |
| Msa0585300 | Msa0800380 | 0.815023 | 1.142938e-51 | -8.615850e-47 |
| Msa0585560 | Msa0800380 | 0.819429 | 1.167127e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0800380 | MtrunA17_Chr7g0246631 | 50.000 | 80 | 36 | 1 | 5 | 84 | 147 | 222 | 1.32e-16 | 73.6 |
| Msa0800380 | MtrunA17_Chr8g0350321 | 47.500 | 80 | 38 | 1 | 5 | 84 | 171 | 246 | 8.84e-16 | 71.2 |
| Msa0800380 | MtrunA17_Chr1g0203671 | 42.500 | 80 | 42 | 1 | 5 | 84 | 151 | 226 | 6.34e-14 | 65.9 |
| Msa0800380 | MtrunA17_Chr6g0472471 | 44.444 | 81 | 39 | 2 | 5 | 85 | 125 | 199 | 8.27e-13 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0800380 | AT4G00730.1 | 45.000 | 80 | 40 | 1 | 5 | 84 | 190 | 265 | 1.20e-15 | 71.2 |
| Msa0800380 | AT4G00730.2 | 45.000 | 80 | 40 | 1 | 5 | 84 | 190 | 265 | 1.26e-15 | 70.9 |
| Msa0800380 | AT3G61150.1 | 45.000 | 80 | 40 | 1 | 5 | 84 | 166 | 241 | 2.87e-15 | 70.1 |
| Msa0800380 | AT5G52170.3 | 37.363 | 91 | 53 | 1 | 5 | 95 | 113 | 199 | 2.55e-11 | 58.9 |
| Msa0800380 | AT5G52170.1 | 37.363 | 91 | 53 | 1 | 5 | 95 | 113 | 199 | 2.55e-11 | 58.9 |
| Msa0800380 | AT5G52170.2 | 37.363 | 91 | 53 | 1 | 5 | 95 | 113 | 199 | 2.56e-11 | 58.9 |
Find 219 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTACACATTGTAAGAATT+TGG | 0.115014 | 5_3:-13749269 | Msa0800380:five_prime_UTR |
| TATTAGTGCTTGTTCTAAAA+TGG | 0.120788 | 5_3:-13751370 | Msa0800380:five_prime_UTR |
| ACTGAGCTTGTTTGATTTAA+TGG | 0.143745 | 5_3:-13750737 | Msa0800380:five_prime_UTR |
| GACAGAGTTTGTGCACTTTC+TGG | 0.152436 | 5_3:-13747645 | Msa0800380:CDS |
| TAAACACCTCAAAACAAAAT+TGG | 0.163762 | 5_3:+13749846 | None:intergenic |
| CTGAAAAGAATTTGGTTAAT+TGG | 0.170791 | 5_3:-13751110 | Msa0800380:five_prime_UTR |
| GGGTTGCCTTGTGCTGATTC+TGG | 0.201078 | 5_3:-13750088 | Msa0800380:five_prime_UTR |
| GATTAGAAGCGCGGCTTAAA+AGG | 0.202123 | 5_3:+13751574 | None:intergenic |
| ATTTGGATGTTGAGCTTTAC+TGG | 0.203581 | 5_3:+13751841 | None:intergenic |
| CCACTGGGTGGCTCCGATTC+TGG | 0.237156 | 5_3:-13749714 | Msa0800380:five_prime_UTR |
| AATGAACTATCTCATAGATT+TGG | 0.247258 | 5_3:-13750109 | Msa0800380:five_prime_UTR |
| CCCGTCTCTTGTTCCTTTGT+CGG | 0.248912 | 5_3:+13748549 | None:intergenic |
| ATTCTAAGGCTACTTGTCTA+AGG | 0.250611 | 5_3:+13750008 | None:intergenic |
| TGTAATGCCTGAAAAGAATT+TGG | 0.256648 | 5_3:-13751118 | Msa0800380:five_prime_UTR |
| GAGGATGAGTAGTAGGAATT+TGG | 0.260487 | 5_3:-13750815 | Msa0800380:five_prime_UTR |
| TAAAAGGGTGCGTGATAAAA+AGG | 0.261069 | 5_3:+13751590 | None:intergenic |
| GCTCAATGGGAGAATGTTTC+AGG | 0.264221 | 5_3:-13750268 | Msa0800380:five_prime_UTR |
| TTCGTGGAATGCAATGATTT+TGG | 0.298622 | 5_3:-13750791 | Msa0800380:five_prime_UTR |
| TGTTTGTCTGAGATCGTTCC+TGG | 0.299666 | 5_3:-13749312 | Msa0800380:five_prime_UTR |
| TGGTAATAGGCTAGGTTCTT+AGG | 0.300430 | 5_3:+13750319 | None:intergenic |
| AGTCAGAGAAGTTTGAAATT+TGG | 0.314997 | 5_3:-13749522 | Msa0800380:five_prime_UTR |
| CAAGTCCACAAGATTGCTTC+CGG | 0.318205 | 5_3:+13750204 | None:intergenic |
| GTTGAAGTTGTTTAGAGAAA+TGG | 0.322258 | 5_3:-13751040 | Msa0800380:five_prime_UTR |
| GATAAGCAGAAACTGGTAAT+AGG | 0.333863 | 5_3:+13750306 | None:intergenic |
| CCAATGAATGTTATTTCATC+AGG | 0.334871 | 5_3:+13750637 | None:intergenic |
| GCTACACATTGTAAGAATTT+GGG | 0.338427 | 5_3:-13749268 | Msa0800380:five_prime_UTR |
| AAGCAAATGATTGATGTGTT+TGG | 0.339748 | 5_3:-13750559 | Msa0800380:five_prime_UTR |
| TACTTTACCTCTTTGAAGAT+TGG | 0.340769 | 5_3:-13751426 | Msa0800380:five_prime_UTR |
| GTAGATTCTGGCCATTCATT+TGG | 0.344151 | 5_3:+13751824 | None:intergenic |
| AAAATGTGACTCAAATTCTA+AGG | 0.356064 | 5_3:+13749994 | None:intergenic |
| TTCATATGTATGGTTCTTGC+GGG | 0.358774 | 5_3:-13751263 | Msa0800380:five_prime_UTR |
| CGGTTCATGGGAGTATGATT+AGG | 0.359126 | 5_3:-13750930 | Msa0800380:five_prime_UTR |
| AAAATGGGTTGCGTTGATAA+AGG | 0.359635 | 5_3:-13751354 | Msa0800380:five_prime_UTR |
| TGGTTGAAATTGCTATAAAT+AGG | 0.360277 | 5_3:-13749408 | Msa0800380:five_prime_UTR |
| TGTCTGATCAGGATTCAAAA+AGG | 0.363349 | 5_3:+13749237 | None:intergenic |
| GACTATGGTTTGTGTGGTTA+CGG | 0.370138 | 5_3:-13750989 | Msa0800380:five_prime_UTR |
| ATGAACTATCTCATAGATTT+GGG | 0.373215 | 5_3:-13750108 | Msa0800380:five_prime_UTR |
| AATTCGTTGGTTCATATGTA+TGG | 0.376964 | 5_3:-13751273 | Msa0800380:five_prime_UTR |
| TGGAATGGTGAGTCGGGATT+TGG | 0.379452 | 5_3:-13751211 | Msa0800380:five_prime_UTR |
| AGCAAATGATTGATGTGTTT+GGG | 0.382492 | 5_3:-13750558 | Msa0800380:five_prime_UTR |
| ATCCATGTCAACAAGAAGTT+TGG | 0.383372 | 5_3:+13750342 | None:intergenic |
| TCTGACTACAAAATCAAGAT+TGG | 0.384014 | 5_3:+13749538 | None:intergenic |
| TCAAGAGAATTTGTCTGATC+AGG | 0.384979 | 5_3:+13749226 | None:intergenic |
| GCGGGGATGTGGAGGTTGCT+AGG | 0.387040 | 5_3:-13751245 | Msa0800380:five_prime_UTR |
| CATAAATGATAAGCAGAAAC+TGG | 0.401288 | 5_3:+13750299 | None:intergenic |
| ATTGGAATTGTTTGATTAGT+GGG | 0.401309 | 5_3:-13751092 | Msa0800380:five_prime_UTR |
| TAGAGGGAATGATAGGACTA+TGG | 0.401460 | 5_3:-13751004 | Msa0800380:five_prime_UTR |
| ATTAGTGCTTGTTCTAAAAT+GGG | 0.405600 | 5_3:-13751369 | Msa0800380:five_prime_UTR |
| TTATGCAGTGGCTGCTCAAT+GGG | 0.406358 | 5_3:-13750281 | Msa0800380:five_prime_UTR |
| CTGATGAAGGAAAGAAAGTT+AGG | 0.406971 | 5_3:-13750235 | Msa0800380:five_prime_UTR |
| GTTGCTAGGGTGATGTTTGA+TGG | 0.407845 | 5_3:-13751231 | Msa0800380:five_prime_UTR |
| TATCTAAAGGGTTATTGAAA+TGG | 0.407986 | 5_3:+13751517 | None:intergenic |
| GCATTCTTTGTGCGTGTGCT+CGG | 0.409225 | 5_3:-13750615 | Msa0800380:five_prime_UTR |
| ATTGAAAATGAAGATGAGTT+AGG | 0.410523 | 5_3:+13751700 | None:intergenic |
| AGTGATGGGGCGTGAGAAGA+AGG | 0.411853 | 5_3:+13751773 | None:intergenic |
| CTCACAGGAGTCATTGTTAT+GGG | 0.413098 | 5_3:-13750422 | Msa0800380:five_prime_UTR |
| AAACACCTCAAAACAAAATT+GGG | 0.413407 | 5_3:+13749847 | None:intergenic |
| TTGAAAGAACTCACCGTAAC+GGG | 0.413539 | 5_3:-13751936 | Msa0800380:five_prime_UTR |
| ATGGGTCGACTGAGAATTAG+AGG | 0.415368 | 5_3:-13751021 | Msa0800380:five_prime_UTR |
| TCTCACAGGAGTCATTGTTA+TGG | 0.418668 | 5_3:-13750423 | Msa0800380:five_prime_UTR |
| TTGAAGTTGTTTAGAGAAAT+GGG | 0.421788 | 5_3:-13751039 | Msa0800380:five_prime_UTR |
| AAGTCCACAAGATTGCTTCC+GGG | 0.423003 | 5_3:+13750205 | None:intergenic |
| TCAAGAGAGATGTGTACTTA+GGG | 0.426186 | 5_3:-13750375 | Msa0800380:five_prime_UTR |
| TGGAGGATCTTAGTTTATAT+AGG | 0.427718 | 5_3:-13749918 | Msa0800380:five_prime_UTR |
| AATTGGAATTGTTTGATTAG+TGG | 0.434120 | 5_3:-13751093 | Msa0800380:five_prime_UTR |
| ATGAAAGTCCAAGTGCAGAT+AGG | 0.440413 | 5_3:-13750678 | Msa0800380:five_prime_UTR |
| GCTTGTTTGATTTAATGGTT+GGG | 0.447392 | 5_3:-13750732 | Msa0800380:five_prime_UTR |
| AAGAACATGACAAAATTTGA+TGG | 0.449209 | 5_3:-13750451 | Msa0800380:five_prime_UTR |
| GTTTGATGGAATGGTGAGTC+GGG | 0.451653 | 5_3:-13751217 | Msa0800380:five_prime_UTR |
| CATTCTTTGTGCGTGTGCTC+GGG | 0.453720 | 5_3:-13750614 | Msa0800380:five_prime_UTR |
| TGAGAATTAGAGGGAATGAT+AGG | 0.454088 | 5_3:-13751011 | Msa0800380:five_prime_UTR |
| ATAGAAGGAAAATCGGTTCA+TGG | 0.454789 | 5_3:-13750943 | Msa0800380:five_prime_UTR |
| CCTGATGAAATAACATTCAT+TGG | 0.455391 | 5_3:-13750637 | Msa0800380:five_prime_UTR |
| GAAATCTCACTAATAATAGT+TGG | 0.456589 | 5_3:+13747720 | None:intergenic |
| AGCTTGTTTGATTTAATGGT+TGG | 0.459621 | 5_3:-13750733 | Msa0800380:five_prime_UTR |
| GTATGGTTCTTGCGGGGATG+TGG | 0.459721 | 5_3:-13751256 | Msa0800380:five_prime_UTR |
| GGCAAGAAACAGAAGGGTTT+AGG | 0.460982 | 5_3:-13747589 | None:intergenic |
| GTAGTAGGAATTTGGTTTCG+TGG | 0.467432 | 5_3:-13750807 | Msa0800380:five_prime_UTR |
| TAGACTTATAGAAGGAAAAT+CGG | 0.467627 | 5_3:-13750950 | Msa0800380:five_prime_UTR |
| TTCAAGAGAGATGTGTACTT+AGG | 0.470258 | 5_3:-13750376 | Msa0800380:five_prime_UTR |
| GATGCACACCGCACCCGTTA+CGG | 0.471120 | 5_3:+13751923 | None:intergenic |
| AAAACGCCATGCACCAGAAT+CGG | 0.472982 | 5_3:+13749701 | None:intergenic |
| TGAAAGTCCAAGTGCAGATA+GGG | 0.473821 | 5_3:-13750677 | Msa0800380:five_prime_UTR |
| TTTATGCAGTGGCTGCTCAA+TGG | 0.474207 | 5_3:-13750282 | Msa0800380:five_prime_UTR |
| GCATTTGATTGAAATTCCAC+TGG | 0.475158 | 5_3:-13749730 | Msa0800380:five_prime_UTR |
| TCGTGGAACTCAATGATTGA+TGG | 0.477167 | 5_3:-13751186 | Msa0800380:five_prime_UTR |
| GTTATCTTTATCTATCATCC+TGG | 0.477600 | 5_3:+13750031 | None:intergenic |
| GAAGAAGGTGGTGAGTGGTT+TGG | 0.480861 | 5_3:+13751655 | None:intergenic |
| AATTGAAAATGCTAGGTTGA+AGG | 0.481602 | 5_3:-13747676 | Msa0800380:CDS |
| TCCAAGTGCAGATAGGGGTT+TGG | 0.482943 | 5_3:-13750671 | Msa0800380:five_prime_UTR |
| TTTGGATGTTGAGCTTTACT+GGG | 0.483314 | 5_3:+13751842 | None:intergenic |
| CGGGGATGTGGAGGTTGCTA+GGG | 0.488402 | 5_3:-13751244 | Msa0800380:five_prime_UTR |
| ATCCTCCACGCATCTTTCCC+AGG | 0.488443 | 5_3:+13749294 | None:intergenic |
| GTGATGGGGCGTGAGAAGAA+GGG | 0.490784 | 5_3:+13751774 | None:intergenic |
| AGAAGAAGGGGTTACGGAAG+GGG | 0.491745 | 5_3:+13751787 | None:intergenic |
| TAACACAGAAAGTATCTAAA+GGG | 0.497025 | 5_3:+13751505 | None:intergenic |
| AGATGAAGAGGAAGAAGTGA+TGG | 0.497880 | 5_3:+13751758 | None:intergenic |
| CGGTCGGGTAGACTTATAGA+AGG | 0.500455 | 5_3:-13750958 | Msa0800380:five_prime_UTR |
| TTGTTATGGGCAAGTTTGCT+CGG | 0.504522 | 5_3:-13750409 | Msa0800380:five_prime_UTR |
| TTAACACAGAAAGTATCTAA+AGG | 0.506538 | 5_3:+13751504 | None:intergenic |
| GTTACGGCTTGTGGACGGTC+GGG | 0.506979 | 5_3:-13750973 | Msa0800380:five_prime_UTR |
| CTGACTACAAAATCAAGATT+GGG | 0.509068 | 5_3:+13749539 | None:intergenic |
| GTTCATATGTATGGTTCTTG+CGG | 0.509908 | 5_3:-13751264 | Msa0800380:five_prime_UTR |
| TGAGTCGGGATTTGGTTTCG+TGG | 0.510221 | 5_3:-13751203 | Msa0800380:five_prime_UTR |
| ATTGATGGGTATGTTAAAGT+TGG | 0.510277 | 5_3:-13751171 | Msa0800380:five_prime_UTR |
| AGCAAATCTTCTTGCAAATG+TGG | 0.511922 | 5_3:-13750503 | Msa0800380:five_prime_UTR |
| ATTTCAAAGTGTCAAACAAT+CGG | 0.513261 | 5_3:-13750165 | Msa0800380:five_prime_UTR |
| GCAAATCTTCTTGCAAATGT+GGG | 0.515737 | 5_3:-13750502 | Msa0800380:five_prime_UTR |
| TAGGGTGATGTTTGATGGAA+TGG | 0.515772 | 5_3:-13751226 | Msa0800380:five_prime_UTR |
| TCTGCTTATCATTTATGCAG+TGG | 0.517278 | 5_3:-13750293 | Msa0800380:five_prime_UTR |
| CGTGGAACTCAATGATTGAT+GGG | 0.518817 | 5_3:-13751185 | Msa0800380:five_prime_UTR |
| TAGATATGTATTGTAAATGC+GGG | 0.519431 | 5_3:-13750867 | Msa0800380:five_prime_UTR |
| ATTAGAAGCGCGGCTTAAAA+GGG | 0.521185 | 5_3:+13751575 | None:intergenic |
| AATTGCTATAAATAGGTGCT+TGG | 0.521619 | 5_3:-13749401 | Msa0800380:five_prime_UTR |
| GTTTGTGTGGTTACGGCTTG+TGG | 0.522446 | 5_3:-13750982 | Msa0800380:five_prime_UTR |
| TCCGACAAAGGAACAAGAGA+CGG | 0.523267 | 5_3:-13748550 | Msa0800380:CDS |
| TGCTGATTCTGGACAATCAT+CGG | 0.526031 | 5_3:-13750077 | Msa0800380:five_prime_UTR |
| AATAGCTTTATGAGGAACAT+AGG | 0.526307 | 5_3:+13751455 | None:intergenic |
| TGCCAAACTTCTTGTTGACA+TGG | 0.526470 | 5_3:-13750344 | Msa0800380:five_prime_UTR |
| TTGTCACAATTTGAACATGT+AGG | 0.526784 | 5_3:+13747744 | None:intergenic |
| GTTTGATTTAATGGTTGGGA+TGG | 0.529151 | 5_3:-13750728 | Msa0800380:five_prime_UTR |
| GTGGCTCCGATTCTGGTGCA+TGG | 0.529383 | 5_3:-13749707 | Msa0800380:five_prime_UTR |
| AAAGTGGCGAGAGTAGATTC+TGG | 0.532443 | 5_3:+13751812 | None:intergenic |
| TTTCTCATGGGGCATCGATA+CGG | 0.532540 | 5_3:-13749885 | Msa0800380:five_prime_UTR |
| AACAAGCTCAGTCCATCCTC+AGG | 0.533163 | 5_3:+13750748 | None:intergenic |
| AGGTAGCTGCAAGTTTCTCA+TGG | 0.533323 | 5_3:-13749898 | Msa0800380:five_prime_UTR |
| AAGCTCAACATCCAAATGAA+TGG | 0.534703 | 5_3:-13751835 | Msa0800380:five_prime_UTR |
| TTCTAAGGCTACTTGTCTAA+GGG | 0.535254 | 5_3:+13750009 | None:intergenic |
| GATGAAGAGGAAGAAGTGAT+GGG | 0.535716 | 5_3:+13751759 | None:intergenic |
| TCAACGTTTCCTGACAGCAT+TGG | 0.536644 | 5_3:+13749488 | None:intergenic |
| GGTTACGGCTTGTGGACGGT+CGG | 0.538390 | 5_3:-13750974 | Msa0800380:five_prime_UTR |
| GAGAAGAAGGGGTTACGGAA+GGG | 0.538827 | 5_3:+13751786 | None:intergenic |
| GTGTCAAACAATCGGCGCGA+AGG | 0.539425 | 5_3:-13750157 | Msa0800380:five_prime_UTR |
| CAACCACTGAACAACCTTGG+AGG | 0.539692 | 5_3:-13749935 | Msa0800380:five_prime_UTR |
| GAAGGGCTTGAATTTGAAGA+AGG | 0.544248 | 5_3:+13751640 | None:intergenic |
| AGAGAGTCGACAAGAGCAAG+AGG | 0.547069 | 5_3:-13748592 | Msa0800380:CDS |
| TCTTTGTGCGTGTGCTCGGG+CGG | 0.547762 | 5_3:-13750611 | Msa0800380:five_prime_UTR |
| TAGAAGGAAAATCGGTTCAT+GGG | 0.547828 | 5_3:-13750942 | Msa0800380:five_prime_UTR |
| TTTGCCGGTGGAAAATTCGT+TGG | 0.547974 | 5_3:-13751286 | Msa0800380:five_prime_UTR |
| ACCAAACCCCTATCTGCACT+TGG | 0.548692 | 5_3:+13750670 | None:intergenic |
| GGGCTTGAATTTGAAGAAGG+TGG | 0.548838 | 5_3:+13751643 | None:intergenic |
| GCAGAAACTGGTAATAGGCT+AGG | 0.550998 | 5_3:+13750311 | None:intergenic |
| ATAGATATGTATTGTAAATG+CGG | 0.551089 | 5_3:-13750868 | Msa0800380:five_prime_UTR |
| CATTTGATTGAAATTCCACT+GGG | 0.556285 | 5_3:-13749729 | Msa0800380:five_prime_UTR |
| TGAGAAGAAGGGGTTACGGA+AGG | 0.556787 | 5_3:+13751785 | None:intergenic |
| TGAATGAAATTTAGCATCAG+TGG | 0.558663 | 5_3:-13749800 | Msa0800380:five_prime_UTR |
| GTCCATCCTCAGGATTCCCA+TGG | 0.558710 | 5_3:+13750758 | None:intergenic |
| ATTTGATGGGTATATCTCAC+AGG | 0.561363 | 5_3:-13750437 | Msa0800380:five_prime_UTR |
| TGGATGAACATGCTCGTGCT+CGG | 0.562106 | 5_3:+13751894 | None:intergenic |
| TGATGGGGCGTGAGAAGAAG+GGG | 0.563612 | 5_3:+13751775 | None:intergenic |
| AACAACTTCAACGCATAACC+AGG | 0.566178 | 5_3:+13751051 | None:intergenic |
| CGGAACTGTTGAGTGAAGGC+AGG | 0.566393 | 5_3:-13750591 | Msa0800380:five_prime_UTR |
| GATCTCAGACAAACAATCAA+AGG | 0.567322 | 5_3:+13749320 | None:intergenic |
| GGTAGCTGCAAGTTTCTCAT+GGG | 0.569511 | 5_3:-13749897 | Msa0800380:five_prime_UTR |
| AAACAACCACTGAACAACCT+TGG | 0.572690 | 5_3:-13749938 | Msa0800380:five_prime_UTR |
| TTTGAAAGAACTCACCGTAA+CGG | 0.572726 | 5_3:-13751937 | Msa0800380:five_prime_UTR |
| TCAGACAAATTCTCTTGAGA+TGG | 0.573396 | 5_3:-13749221 | Msa0800380:five_prime_UTR |
| TTGTAAATGCGGGAGAGTTG+AGG | 0.577950 | 5_3:-13750857 | Msa0800380:five_prime_UTR |
| GTTTGTCTGAGATCGTTCCT+GGG | 0.581994 | 5_3:-13749311 | Msa0800380:five_prime_UTR |
| GTCTTCAAATTGAAAATGCT+AGG | 0.584052 | 5_3:-13747683 | Msa0800380:CDS |
| TTGTGAAGGTGAAGATGAAG+AGG | 0.587669 | 5_3:+13751746 | None:intergenic |
| TGTTTGATGGAATGGTGAGT+CGG | 0.587687 | 5_3:-13751218 | Msa0800380:five_prime_UTR |
| AGAACATGACAAAATTTGAT+GGG | 0.589187 | 5_3:-13750450 | Msa0800380:five_prime_UTR |
| CCGACAAAGGAACAAGAGAC+GGG | 0.589475 | 5_3:-13748549 | Msa0800380:CDS |
| TGGTTCTTGCGGGGATGTGG+AGG | 0.590048 | 5_3:-13751253 | Msa0800380:five_prime_UTR |
| GTTGGGATGGAGAGTGTGAA+AGG | 0.590206 | 5_3:-13750715 | Msa0800380:five_prime_UTR |
| AAAAGCTAGAAGTGATGAGA+AGG | 0.590599 | 5_3:+13751622 | None:intergenic |
| CTTATTTGATGAGATTGAGA+TGG | 0.591562 | 5_3:-13747616 | Msa0800380:CDS |
| CGGGCGGAACTGTTGAGTGA+AGG | 0.593889 | 5_3:-13750595 | Msa0800380:five_prime_UTR |
| ATAAAGGTAGAATGTGTCAT+GGG | 0.597799 | 5_3:-13751338 | Msa0800380:five_prime_UTR |
| CAATGAATGTTATTTCATCA+GGG | 0.599325 | 5_3:+13750638 | None:intergenic |
| AGAACTCACCGTAACGGGTG+CGG | 0.601266 | 5_3:-13751931 | Msa0800380:five_prime_UTR |
| ATGAAGAGGAAGAAGTGATG+GGG | 0.602644 | 5_3:+13751760 | None:intergenic |
| GATAAAGGTAGAATGTGTCA+TGG | 0.602858 | 5_3:-13751339 | Msa0800380:five_prime_UTR |
| AGCACGAGCATGTTCATCCA+TGG | 0.605297 | 5_3:-13751891 | Msa0800380:five_prime_UTR |
| TGAGTGGTTTGGCAATGAGA+AGG | 0.607604 | 5_3:+13751666 | None:intergenic |
| TGGTGAAGGCAAGAAACAGA+AGG | 0.611876 | 5_3:-13747596 | Msa0800380:CDS |
| GGCGTGAGAAGAAGGGGTTA+CGG | 0.611910 | 5_3:+13751781 | None:intergenic |
| GTGTGGTTACGGCTTGTGGA+CGG | 0.612414 | 5_3:-13750978 | Msa0800380:five_prime_UTR |
| ACACATTGTAAGAATTTGGG+AGG | 0.613467 | 5_3:-13749265 | Msa0800380:five_prime_UTR |
| AAAGAAGCCAATCTTCAAAG+AGG | 0.615028 | 5_3:+13751419 | None:intergenic |
| CAAATCTTCTTGCAAATGTG+GGG | 0.621908 | 5_3:-13750501 | Msa0800380:five_prime_UTR |
| GATGGTGCTCATCGATGAGA+AGG | 0.622187 | 5_3:-13749203 | Msa0800380:intron |
| GTGACTTGAGTGCTGCACAC+AGG | 0.626096 | 5_3:-13751149 | Msa0800380:five_prime_UTR |
| ATCCATGGGAATCCTGAGGA+TGG | 0.626380 | 5_3:-13750760 | Msa0800380:five_prime_UTR |
| ATTCTGTGGGCACTGCCACA+AGG | 0.627631 | 5_3:-13749615 | Msa0800380:five_prime_UTR |
| TTGATTGAAATTCCACTGGG+TGG | 0.628370 | 5_3:-13749726 | Msa0800380:five_prime_UTR |
| AATACCCGGAAGCAATCTTG+TGG | 0.628479 | 5_3:-13750209 | Msa0800380:five_prime_UTR |
| TGATAGGACTATGGTTTGTG+TGG | 0.628784 | 5_3:-13750995 | Msa0800380:five_prime_UTR |
| TGATGAGATTGAGATGGTGA+AGG | 0.630063 | 5_3:-13747610 | Msa0800380:CDS |
| GATCCTCCAAGGTTGTTCAG+TGG | 0.630118 | 5_3:+13749932 | None:intergenic |
| GGCACTGCCACAAGGTATCG+AGG | 0.631654 | 5_3:-13749607 | Msa0800380:five_prime_UTR |
| CAAGAGAGATGTGTACTTAG+GGG | 0.635874 | 5_3:-13750374 | Msa0800380:five_prime_UTR |
| TCGTTCCTGGGAAAGATGCG+TGG | 0.643650 | 5_3:-13749299 | Msa0800380:five_prime_UTR |
| TGAAAGGTGGTGAATCGCCA+TGG | 0.645182 | 5_3:+13751874 | None:intergenic |
| CTGTGCAGAGATTAGAAGCG+CGG | 0.647693 | 5_3:+13751565 | None:intergenic |
| AAATGTGGGGCTTATTGACG+AGG | 0.649002 | 5_3:-13750488 | Msa0800380:five_prime_UTR |
| GAAAGTCCAAGTGCAGATAG+GGG | 0.649358 | 5_3:-13750676 | Msa0800380:five_prime_UTR |
| ATATAAACTAAGATCCTCCA+AGG | 0.650209 | 5_3:+13749921 | None:intergenic |
| AATTTGAAGAAGGTGGTGAG+TGG | 0.664496 | 5_3:+13751650 | None:intergenic |
| AGACAGAGCTGCTGACACAA+AGG | 0.664638 | 5_3:+13749457 | None:intergenic |
| AAAAGAGTACAATCCGACAA+AGG | 0.664827 | 5_3:-13748562 | Msa0800380:CDS |
| GTGCAGATAGGGGTTTGGTG+AGG | 0.665872 | 5_3:-13750666 | Msa0800380:five_prime_UTR |
| TGGGTCGACTGAGAATTAGA+GGG | 0.667867 | 5_3:-13751020 | Msa0800380:five_prime_UTR |
| AAAGCTAGAAGTGATGAGAA+GGG | 0.668279 | 5_3:+13751623 | None:intergenic |
| GAGTGTGAAAGGTGAAGTTG+AGG | 0.671225 | 5_3:-13750704 | Msa0800380:five_prime_UTR |
| GGTGAAGGCAAGAAACAGAA+GGG | 0.672932 | 5_3:-13747595 | Msa0800380:CDS |
| AGAAAGTTAGGCATAATACC+CGG | 0.674773 | 5_3:-13750223 | Msa0800380:five_prime_UTR |
| TAAATGCGGGAGAGTTGAGG+CGG | 0.675286 | 5_3:-13750854 | Msa0800380:five_prime_UTR |
| TTGCATCCATGGGAATCCTG+AGG | 0.677504 | 5_3:-13750764 | Msa0800380:five_prime_UTR |
| ACGGAAAACTCATTTGACGA+AGG | 0.684179 | 5_3:-13748625 | Msa0800380:CDS |
| CCAGAATCGGAGCCACCCAG+TGG | 0.684519 | 5_3:+13749714 | None:intergenic |
| GTATGATTAGGTTGTTTACG+AGG | 0.684922 | 5_3:-13750918 | Msa0800380:five_prime_UTR |
| CAAACTACCTCGATACCTTG+TGG | 0.686876 | 5_3:+13749600 | None:intergenic |
| GTAGCTGCAAGTTTCTCATG+GGG | 0.694431 | 5_3:-13749896 | Msa0800380:five_prime_UTR |
| GATTGTCCAGAATCAGCACA+AGG | 0.701391 | 5_3:+13750082 | None:intergenic |
| TTCCTGGGAAAGATGCGTGG+AGG | 0.701822 | 5_3:-13749296 | Msa0800380:five_prime_UTR |
| TCATATGTATGGTTCTTGCG+GGG | 0.702184 | 5_3:-13751262 | Msa0800380:five_prime_UTR |
| TGATTCTGGACAATCATCGG+TGG | 0.718267 | 5_3:-13750074 | Msa0800380:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACAAACAATTTTTAAAAAA+AGG | + | chr5_3:13750893-13750912 | None:intergenic | 10.0% |
| !! | ATTATATAATATCTTTATGA+TGG | - | chr5_3:13751795-13751814 | Msa0800380:five_prime_UTR | 10.0% |
| !!! | TAATATGTTTCAGATATTTT+TGG | - | chr5_3:13751577-13751596 | Msa0800380:five_prime_UTR | 15.0% |
| !!! | CATTTGTGTTATATTTTTAA+TGG | + | chr5_3:13751706-13751725 | None:intergenic | 15.0% |
| !! | ATATTATATAATCTAAGCTT+AGG | + | chr5_3:13751787-13751806 | None:intergenic | 15.0% |
| !!! | TTTTGTTTTTAACTGTTTTG+GGG | + | chr5_3:13747606-13747625 | None:intergenic | 20.0% |
| !!! | CTTTTGTTTTTAACTGTTTT+GGG | + | chr5_3:13747607-13747626 | None:intergenic | 20.0% |
| !!! | TAAAAAACAATAGCTTTATG+AGG | + | chr5_3:13748131-13748150 | None:intergenic | 20.0% |
| !! | ATAGATATGTATTGTAAATG+CGG | - | chr5_3:13748707-13748726 | Msa0800380:intron | 20.0% |
| !!! | GAAATCTGTTTTTGAATTTA+TGG | - | chr5_3:13750463-13750482 | Msa0800380:five_prime_UTR | 20.0% |
| !!! | GGATAATTTAAAACAGAATA+GGG | + | chr5_3:13750715-13750734 | None:intergenic | 20.0% |
| !!! | TGGATAATTTAAAACAGAAT+AGG | + | chr5_3:13750716-13750735 | None:intergenic | 20.0% |
| !!! | TAGACTGAGTTATTTTTTAT+TGG | - | chr5_3:13750856-13750875 | Msa0800380:five_prime_UTR | 20.0% |
| !!! | AAATATAAAGAAGGTATTGT+TGG | + | chr5_3:13751127-13751146 | None:intergenic | 20.0% |
| !! | TCTATACCTTAAAATAATGT+GGG | + | chr5_3:13751242-13751261 | None:intergenic | 20.0% |
| !! | TTCTATACCTTAAAATAATG+TGG | + | chr5_3:13751243-13751262 | None:intergenic | 20.0% |
| !!! | TTTAGAGGTATTGTTAATAT+TGG | - | chr5_3:13751347-13751366 | Msa0800380:five_prime_UTR | 20.0% |
| !!! | AGTTGTTATTTGTTTTCTTT+TGG | - | chr5_3:13751401-13751420 | Msa0800380:five_prime_UTR | 20.0% |
| !!! | GTTGTTATTTGTTTTCTTTT+GGG | - | chr5_3:13751402-13751421 | Msa0800380:five_prime_UTR | 20.0% |
| !! | AAGCTATTATTTGGAAAATA+AGG | + | chr5_3:13751463-13751482 | None:intergenic | 20.0% |
| !! | AAGAAAGATAAGCTATTATT+TGG | + | chr5_3:13751472-13751491 | None:intergenic | 20.0% |
| !! | TTTGAATCTGAAAAAATAGT+AGG | + | chr5_3:13751545-13751564 | None:intergenic | 20.0% |
| !!! | TTTGTTTTTAACTGTTTTGG+GGG | + | chr5_3:13747605-13747624 | None:intergenic | 25.0% |
| !!! | GCTTTTGTTTTTAACTGTTT+TGG | + | chr5_3:13747608-13747627 | None:intergenic | 25.0% |
| ! | ATTGAAAATGAAGATGAGTT+AGG | + | chr5_3:13747878-13747897 | None:intergenic | 25.0% |
| ! | TATCTAAAGGGTTATTGAAA+TGG | + | chr5_3:13748061-13748080 | None:intergenic | 25.0% |
| !!! | TAACACAGAAAGTATCTAAA+GGG | + | chr5_3:13748073-13748092 | None:intergenic | 25.0% |
| !!! | TTAACACAGAAAGTATCTAA+AGG | + | chr5_3:13748074-13748093 | None:intergenic | 25.0% |
| !!! | TATTAGTGCTTGTTCTAAAA+TGG | - | chr5_3:13748205-13748224 | Msa0800380:intron | 25.0% |
| !!! | ATTAGTGCTTGTTCTAAAAT+GGG | - | chr5_3:13748206-13748225 | Msa0800380:intron | 25.0% |
| !! | CAATTAACCAAATTCTTTTC+AGG | + | chr5_3:13748467-13748486 | None:intergenic | 25.0% |
| ! | CTGAAAAGAATTTGGTTAAT+TGG | - | chr5_3:13748465-13748484 | Msa0800380:intron | 25.0% |
| ! | AATTGGAATTGTTTGATTAG+TGG | - | chr5_3:13748482-13748501 | Msa0800380:intron | 25.0% |
| ! | ATTGGAATTGTTTGATTAGT+GGG | - | chr5_3:13748483-13748502 | Msa0800380:intron | 25.0% |
| ! | TTGAAGTTGTTTAGAGAAAT+GGG | - | chr5_3:13748536-13748555 | Msa0800380:intron | 25.0% |
| ! | TAGACTTATAGAAGGAAAAT+CGG | - | chr5_3:13748625-13748644 | Msa0800380:CDS | 25.0% |
| ! | TAGATATGTATTGTAAATGC+GGG | - | chr5_3:13748708-13748727 | Msa0800380:intron | 25.0% |
| !!! | CAATGAATGTTATTTCATCA+GGG | + | chr5_3:13748940-13748959 | None:intergenic | 25.0% |
| ! | AAGAACATGACAAAATTTGA+TGG | - | chr5_3:13749124-13749143 | Msa0800380:intron | 25.0% |
| ! | AGAACATGACAAAATTTGAT+GGG | - | chr5_3:13749125-13749144 | Msa0800380:intron | 25.0% |
| !! | ATTTCAAAGTGTCAAACAAT+CGG | - | chr5_3:13749410-13749429 | Msa0800380:five_prime_UTR | 25.0% |
| ! | AATGAACTATCTCATAGATT+TGG | - | chr5_3:13749466-13749485 | Msa0800380:five_prime_UTR | 25.0% |
| ! | ATGAACTATCTCATAGATTT+GGG | - | chr5_3:13749467-13749486 | Msa0800380:five_prime_UTR | 25.0% |
| ! | AAAATGTGACTCAAATTCTA+AGG | + | chr5_3:13749584-13749603 | None:intergenic | 25.0% |
| !!! | AATATCCCAATTTTGTTTTG+AGG | - | chr5_3:13749723-13749742 | Msa0800380:five_prime_UTR | 25.0% |
| ! | AAACACCTCAAAACAAAATT+GGG | + | chr5_3:13749731-13749750 | None:intergenic | 25.0% |
| ! | TAAACACCTCAAAACAAAAT+TGG | + | chr5_3:13749732-13749751 | None:intergenic | 25.0% |
| !!! | TTGTTTTTGATCAAATTCTG+TGG | - | chr5_3:13749946-13749965 | Msa0800380:five_prime_UTR | 25.0% |
| !!! | TGTTTTTGATCAAATTCTGT+GGG | - | chr5_3:13749947-13749966 | Msa0800380:five_prime_UTR | 25.0% |
| !!! | CATTTTTCAATGGAGATTTT+GGG | + | chr5_3:13750008-13750027 | None:intergenic | 25.0% |
| !!! | TCATTTTTCAATGGAGATTT+TGG | + | chr5_3:13750009-13750028 | None:intergenic | 25.0% |
| ! | TGGTTGAAATTGCTATAAAT+AGG | - | chr5_3:13750167-13750186 | Msa0800380:five_prime_UTR | 25.0% |
| ! | ATTTATCAATCTTTGTATGC+AGG | + | chr5_3:13750665-13750684 | None:intergenic | 25.0% |
| !! | ATTGTTTTCTTTGTTGAAGA+CGG | - | chr5_3:13750931-13750950 | Msa0800380:five_prime_UTR | 25.0% |
| ! | ACCTTCTTTATATTTAGTTG+TGG | - | chr5_3:13751132-13751151 | Msa0800380:five_prime_UTR | 25.0% |
| ! | ACCACAACTAAATATAAAGA+AGG | + | chr5_3:13751136-13751155 | None:intergenic | 25.0% |
| !! | GCTAAATTTTACTTCCAAAA+GGG | + | chr5_3:13751327-13751346 | None:intergenic | 25.0% |
| !! | AGCTAAATTTTACTTCCAAA+AGG | + | chr5_3:13751328-13751347 | None:intergenic | 25.0% |
| !!! | GAAGTAAAATTTAGCTTTAG+AGG | - | chr5_3:13751332-13751351 | Msa0800380:five_prime_UTR | 25.0% |
| ! | TAGGATGAAATTAAGAGTAA+AGG | + | chr5_3:13751526-13751545 | None:intergenic | 25.0% |
| !!! | AAGTTGATGTCATTTTTACA+TGG | - | chr5_3:13751727-13751746 | Msa0800380:five_prime_UTR | 25.0% |
| ! | GAAATCTCACTAATAATAGT+TGG | + | chr5_3:13751858-13751877 | None:intergenic | 25.0% |
| !! | TAGCATTTTCAATTTGAAGA+CGG | + | chr5_3:13751893-13751912 | None:intergenic | 25.0% |
| !!! | TTGTTTTTAACTGTTTTGGG+GGG | + | chr5_3:13747604-13747623 | None:intergenic | 30.0% |
| !!! | GTTGTTTTTTTGTCTTGTGA+AGG | + | chr5_3:13747846-13747865 | None:intergenic | 30.0% |
| !! | AATAGCTTTATGAGGAACAT+AGG | + | chr5_3:13748123-13748142 | None:intergenic | 30.0% |
| ! | TACTTTACCTCTTTGAAGAT+TGG | - | chr5_3:13748149-13748168 | Msa0800380:intron | 30.0% |
| ATAAAGGTAGAATGTGTCAT+GGG | - | chr5_3:13748237-13748256 | Msa0800380:intron | 30.0% | |
| !! | AATTCGTTGGTTCATATGTA+TGG | - | chr5_3:13748302-13748321 | Msa0800380:intron | 30.0% |
| ! | ATTGATGGGTATGTTAAAGT+TGG | - | chr5_3:13748404-13748423 | Msa0800380:intron | 30.0% |
| TGTAATGCCTGAAAAGAATT+TGG | - | chr5_3:13748457-13748476 | Msa0800380:intron | 30.0% | |
| !!! | TTTGATTAGTGGGTTTTTGA+AGG | - | chr5_3:13748493-13748512 | Msa0800380:intron | 30.0% |
| !!! | TTGATTAGTGGGTTTTTGAA+GGG | - | chr5_3:13748494-13748513 | Msa0800380:intron | 30.0% |
| GTTGAAGTTGTTTAGAGAAA+TGG | - | chr5_3:13748535-13748554 | Msa0800380:intron | 30.0% | |
| ! | ACTGAGCTTGTTTGATTTAA+TGG | - | chr5_3:13748838-13748857 | Msa0800380:intron | 30.0% |
| ! | AGCTTGTTTGATTTAATGGT+TGG | - | chr5_3:13748842-13748861 | Msa0800380:intron | 30.0% |
| ! | GCTTGTTTGATTTAATGGTT+GGG | - | chr5_3:13748843-13748862 | Msa0800380:intron | 30.0% |
| !! | CCAATGAATGTTATTTCATC+AGG | + | chr5_3:13748941-13748960 | None:intergenic | 30.0% |
| CCTGATGAAATAACATTCAT+TGG | - | chr5_3:13748938-13748957 | Msa0800380:intron | 30.0% | |
| AAGCAAATGATTGATGTGTT+TGG | - | chr5_3:13749016-13749035 | Msa0800380:intron | 30.0% | |
| AGCAAATGATTGATGTGTTT+GGG | - | chr5_3:13749017-13749036 | Msa0800380:intron | 30.0% | |
| ! | CAAATTTTGTCATGTTCTTC+AGG | + | chr5_3:13749123-13749142 | None:intergenic | 30.0% |
| CATAAATGATAAGCAGAAAC+TGG | + | chr5_3:13749279-13749298 | None:intergenic | 30.0% | |
| GTTATCTTTATCTATCATCC+TGG | + | chr5_3:13749547-13749566 | None:intergenic | 30.0% | |
| ! | TAAGCTTCCTTGATTTTTAC+TGG | - | chr5_3:13749611-13749630 | Msa0800380:five_prime_UTR | 30.0% |
| !! | GTTTTGACCAGTAAAAATCA+AGG | + | chr5_3:13749621-13749640 | None:intergenic | 30.0% |
| ATATAAACTAAGATCCTCCA+AGG | + | chr5_3:13749657-13749676 | None:intergenic | 30.0% | |
| TGGAGGATCTTAGTTTATAT+AGG | - | chr5_3:13749657-13749676 | Msa0800380:five_prime_UTR | 30.0% | |
| TGAATGAAATTTAGCATCAG+TGG | - | chr5_3:13749775-13749794 | Msa0800380:five_prime_UTR | 30.0% | |
| CATTTGATTGAAATTCCACT+GGG | - | chr5_3:13749846-13749865 | Msa0800380:five_prime_UTR | 30.0% | |
| !!! | GCGTTTTTTCTCTAATTTTC+TGG | - | chr5_3:13749890-13749909 | Msa0800380:five_prime_UTR | 30.0% |
| CTCCATTGAAAAATGAAATG+CGG | - | chr5_3:13750013-13750032 | Msa0800380:five_prime_UTR | 30.0% | |
| CTGACTACAAAATCAAGATT+GGG | + | chr5_3:13750039-13750058 | None:intergenic | 30.0% | |
| TCTGACTACAAAATCAAGAT+TGG | + | chr5_3:13750040-13750059 | None:intergenic | 30.0% | |
| ! | AGTCAGAGAAGTTTGAAATT+TGG | - | chr5_3:13750053-13750072 | Msa0800380:five_prime_UTR | 30.0% |
| AGAGAAAAACAATGGCAATT+CGG | + | chr5_3:13750148-13750167 | None:intergenic | 30.0% | |
| TTTCAACCAGAGAAAAACAA+TGG | + | chr5_3:13750156-13750175 | None:intergenic | 30.0% | |
| AATTGCTATAAATAGGTGCT+TGG | - | chr5_3:13750174-13750193 | Msa0800380:five_prime_UTR | 30.0% | |
| AGCTACACATTGTAAGAATT+TGG | - | chr5_3:13750306-13750325 | Msa0800380:five_prime_UTR | 30.0% | |
| GCTACACATTGTAAGAATTT+GGG | - | chr5_3:13750307-13750326 | Msa0800380:five_prime_UTR | 30.0% | |
| ! | TTTGAAACAAAACATGAGCA+AGG | + | chr5_3:13750426-13750445 | None:intergenic | 30.0% |
| !! | TGGTCGTTTTGTTATGATTT+TGG | - | chr5_3:13750483-13750502 | Msa0800380:five_prime_UTR | 30.0% |
| !! | TATGATTTTGGTGAATTCGT+AGG | - | chr5_3:13750495-13750514 | Msa0800380:five_prime_UTR | 30.0% |
| !! | ATGATTTTGGTGAATTCGTA+GGG | - | chr5_3:13750496-13750515 | Msa0800380:five_prime_UTR | 30.0% |
| AATCTTTGTATGCAGGATAT+GGG | + | chr5_3:13750658-13750677 | None:intergenic | 30.0% | |
| ATGTGATCTATACTTGAAGA+AGG | + | chr5_3:13750753-13750772 | None:intergenic | 30.0% | |
| ! | AAAACACCAGTGGAATTTTT+CGG | - | chr5_3:13751049-13751068 | Msa0800380:five_prime_UTR | 30.0% |
| !! | TTTTCGGTCAGTTTGATTTA+AGG | - | chr5_3:13751065-13751084 | Msa0800380:five_prime_UTR | 30.0% |
| ! | TTTCGGTCAGTTTGATTTAA+GGG | - | chr5_3:13751066-13751085 | Msa0800380:five_prime_UTR | 30.0% |
| GAACAACTAGAAATATAGCA+AGG | + | chr5_3:13751220-13751239 | None:intergenic | 30.0% | |
| !! | GTTGTTCCCACATTATTTTA+AGG | - | chr5_3:13751233-13751252 | Msa0800380:five_prime_UTR | 30.0% |
| ATAAACATGTCAACTGTTAG+GGG | + | chr5_3:13751375-13751394 | None:intergenic | 30.0% | |
| CATAAACATGTCAACTGTTA+GGG | + | chr5_3:13751376-13751395 | None:intergenic | 30.0% | |
| ACATAAACATGTCAACTGTT+AGG | + | chr5_3:13751377-13751396 | None:intergenic | 30.0% | |
| ACAGTTGACATGTTTATGTT+CGG | - | chr5_3:13751378-13751397 | Msa0800380:five_prime_UTR | 30.0% | |
| !! | GTTTTCTTTTGGGAATGAAA+TGG | - | chr5_3:13751412-13751431 | Msa0800380:five_prime_UTR | 30.0% |
| AATGAAATGGTTTATCACCA+AGG | - | chr5_3:13751425-13751444 | Msa0800380:five_prime_UTR | 30.0% | |
| ATTAAGAGTAAAGGTGACAA+TGG | + | chr5_3:13751517-13751536 | None:intergenic | 30.0% | |
| !!! | TGTTTCAGATATTTTTGGCA+AGG | - | chr5_3:13751582-13751601 | Msa0800380:five_prime_UTR | 30.0% |
| CAATCTCTCTTTAACTCAAA+AGG | + | chr5_3:13751628-13751647 | None:intergenic | 30.0% | |
| TTGAGTTAAAGAGAGATTGT+CGG | - | chr5_3:13751629-13751648 | Msa0800380:five_prime_UTR | 30.0% | |
| TTTACATGGTTTGATCTTTC+TGG | - | chr5_3:13751741-13751760 | Msa0800380:five_prime_UTR | 30.0% | |
| !! | ATCTTTATGATGGATGCAAT+AGG | - | chr5_3:13751805-13751824 | Msa0800380:five_prime_UTR | 30.0% |
| TTGTCACAATTTGAACATGT+AGG | + | chr5_3:13751834-13751853 | None:intergenic | 30.0% | |
| GTCTTCAAATTGAAAATGCT+AGG | - | chr5_3:13751892-13751911 | Msa0800380:five_prime_UTR | 30.0% | |
| ! | AATTGAAAATGCTAGGTTGA+AGG | - | chr5_3:13751899-13751918 | Msa0800380:five_prime_UTR | 30.0% |
| CTTATTTGATGAGATTGAGA+TGG | - | chr5_3:13751959-13751978 | Msa0800380:five_prime_UTR | 30.0% | |
| TTTGAAAGAACTCACCGTAA+CGG | - | chr5_3:13747638-13747657 | Msa0800380:CDS | 35.0% | |
| !!! | TACTGGGTTTTGAGATTGAA+AGG | + | chr5_3:13747720-13747739 | None:intergenic | 35.0% |
| TTTGGATGTTGAGCTTTACT+GGG | + | chr5_3:13747736-13747755 | None:intergenic | 35.0% | |
| ATTTGGATGTTGAGCTTTAC+TGG | + | chr5_3:13747737-13747756 | None:intergenic | 35.0% | |
| AAGCTCAACATCCAAATGAA+TGG | - | chr5_3:13747740-13747759 | Msa0800380:CDS | 35.0% | |
| AAAGCTAGAAGTGATGAGAA+GGG | + | chr5_3:13747955-13747974 | None:intergenic | 35.0% | |
| AAAAGCTAGAAGTGATGAGA+AGG | + | chr5_3:13747956-13747975 | None:intergenic | 35.0% | |
| ! | AAAAGGGTGCGTGATAAAAA+GGG | + | chr5_3:13747987-13748006 | None:intergenic | 35.0% |
| ! | TAAAAGGGTGCGTGATAAAA+AGG | + | chr5_3:13747988-13748007 | None:intergenic | 35.0% |
| AAAGAAGCCAATCTTCAAAG+AGG | + | chr5_3:13748159-13748178 | None:intergenic | 35.0% | |
| !! | AAAATGGGTTGCGTTGATAA+AGG | - | chr5_3:13748221-13748240 | Msa0800380:intron | 35.0% |
| GATAAAGGTAGAATGTGTCA+TGG | - | chr5_3:13748236-13748255 | Msa0800380:intron | 35.0% | |
| GTTCATATGTATGGTTCTTG+CGG | - | chr5_3:13748311-13748330 | Msa0800380:intron | 35.0% | |
| TTCATATGTATGGTTCTTGC+GGG | - | chr5_3:13748312-13748331 | Msa0800380:intron | 35.0% | |
| TGAGAATTAGAGGGAATGAT+AGG | - | chr5_3:13748564-13748583 | Msa0800380:CDS | 35.0% | |
| ! | ATAGAAGGAAAATCGGTTCA+TGG | - | chr5_3:13748632-13748651 | Msa0800380:intron | 35.0% |
| ! | TAGAAGGAAAATCGGTTCAT+GGG | - | chr5_3:13748633-13748652 | Msa0800380:intron | 35.0% |
| ! | GTATGATTAGGTTGTTTACG+AGG | - | chr5_3:13748657-13748676 | Msa0800380:intron | 35.0% |
| !! | TTTTTGAGAGGATGAGTAGT+AGG | - | chr5_3:13748753-13748772 | Msa0800380:intron | 35.0% |
| ! | TTCGTGGAATGCAATGATTT+TGG | - | chr5_3:13748784-13748803 | Msa0800380:intron | 35.0% |
| ! | TCGTGGAATGCAATGATTTT+GGG | - | chr5_3:13748785-13748804 | Msa0800380:intron | 35.0% |
| ! | GTTTGATTTAATGGTTGGGA+TGG | - | chr5_3:13748847-13748866 | Msa0800380:intron | 35.0% |
| CACCAAAAATGAGCGAAATT+CGG | + | chr5_3:13749049-13749068 | None:intergenic | 35.0% | |
| AGCAAATCTTCTTGCAAATG+TGG | - | chr5_3:13749072-13749091 | Msa0800380:intron | 35.0% | |
| GCAAATCTTCTTGCAAATGT+GGG | - | chr5_3:13749073-13749092 | Msa0800380:intron | 35.0% | |
| CAAATCTTCTTGCAAATGTG+GGG | - | chr5_3:13749074-13749093 | Msa0800380:intron | 35.0% | |
| ! | ATTTGATGGGTATATCTCAC+AGG | - | chr5_3:13749138-13749157 | Msa0800380:intron | 35.0% |
| TTCAAGAGAGATGTGTACTT+AGG | - | chr5_3:13749199-13749218 | Msa0800380:intron | 35.0% | |
| TCAAGAGAGATGTGTACTTA+GGG | - | chr5_3:13749200-13749219 | Msa0800380:intron | 35.0% | |
| ATCCATGTCAACAAGAAGTT+TGG | + | chr5_3:13749236-13749255 | None:intergenic | 35.0% | |
| GATAAGCAGAAACTGGTAAT+AGG | + | chr5_3:13749272-13749291 | None:intergenic | 35.0% | |
| TCTGCTTATCATTTATGCAG+TGG | - | chr5_3:13749282-13749301 | Msa0800380:five_prime_UTR | 35.0% | |
| CTGATGAAGGAAAGAAAGTT+AGG | - | chr5_3:13749340-13749359 | Msa0800380:five_prime_UTR | 35.0% | |
| AGAAAGTTAGGCATAATACC+CGG | - | chr5_3:13749352-13749371 | Msa0800380:five_prime_UTR | 35.0% | |
| !! | TTCTAAGGCTACTTGTCTAA+GGG | + | chr5_3:13749569-13749588 | None:intergenic | 35.0% |
| !! | ATTCTAAGGCTACTTGTCTA+AGG | + | chr5_3:13749570-13749589 | None:intergenic | 35.0% |
| GCATTTGATTGAAATTCCAC+TGG | - | chr5_3:13749845-13749864 | Msa0800380:five_prime_UTR | 35.0% | |
| !! | GAATTGCCATTGTTTTTCTC+TGG | - | chr5_3:13750147-13750166 | Msa0800380:five_prime_UTR | 35.0% |
| GATCTCAGACAAACAATCAA+AGG | + | chr5_3:13750258-13750277 | None:intergenic | 35.0% | |
| ACACATTGTAAGAATTTGGG+AGG | - | chr5_3:13750310-13750329 | Msa0800380:five_prime_UTR | 35.0% | |
| TGTCTGATCAGGATTCAAAA+AGG | + | chr5_3:13750341-13750360 | None:intergenic | 35.0% | |
| TCAAGAGAATTTGTCTGATC+AGG | + | chr5_3:13750352-13750371 | None:intergenic | 35.0% | |
| TCAGACAAATTCTCTTGAGA+TGG | - | chr5_3:13750354-13750373 | Msa0800380:five_prime_UTR | 35.0% | |
| AAAAAGAGCAACATCAAACC+TGG | + | chr5_3:13750581-13750600 | None:intergenic | 35.0% | |
| CAATCTTTGTATGCAGGATA+TGG | + | chr5_3:13750659-13750678 | None:intergenic | 35.0% | |
| TGAAGAAGGACAAATATGAG+AGG | + | chr5_3:13750739-13750758 | None:intergenic | 35.0% | |
| AGATTTCAACACTGAATGGA+TGG | + | chr5_3:13750810-13750829 | None:intergenic | 35.0% | |
| ATCGAGATTTCAACACTGAA+TGG | + | chr5_3:13750814-13750833 | None:intergenic | 35.0% | |
| ! | AAAAGAGTACAATCCGACAA+AGG | - | chr5_3:13751013-13751032 | Msa0800380:five_prime_UTR | 35.0% |
| ! | AGGTATTGTTGGAGAAGAAA+GGG | + | chr5_3:13751116-13751135 | None:intergenic | 35.0% |
| !! | AAGGTATTGTTGGAGAAGAA+AGG | + | chr5_3:13751117-13751136 | None:intergenic | 35.0% |
| CTATGACTAGAGGAACTATT+GGG | - | chr5_3:13751183-13751202 | Msa0800380:five_prime_UTR | 35.0% | |
| ! | CTTTCATCAAATAGCCCTTT+TGG | - | chr5_3:13751310-13751329 | Msa0800380:five_prime_UTR | 35.0% |
| !!! | GATATTTTTGGCAAGGATCA+TGG | - | chr5_3:13751589-13751608 | Msa0800380:five_prime_UTR | 35.0% |
| TTGAAAGAACTCACCGTAAC+GGG | - | chr5_3:13747639-13747658 | Msa0800380:CDS | 40.0% | |
| !!! | TGGGTTTTGAGATTGAAAGG+TGG | + | chr5_3:13747717-13747736 | None:intergenic | 40.0% |
| GTAGATTCTGGCCATTCATT+TGG | + | chr5_3:13747754-13747773 | None:intergenic | 40.0% | |
| ATGAAGAGGAAGAAGTGATG+GGG | + | chr5_3:13747818-13747837 | None:intergenic | 40.0% | |
| GATGAAGAGGAAGAAGTGAT+GGG | + | chr5_3:13747819-13747838 | None:intergenic | 40.0% | |
| AGATGAAGAGGAAGAAGTGA+TGG | + | chr5_3:13747820-13747839 | None:intergenic | 40.0% | |
| TTGTGAAGGTGAAGATGAAG+AGG | + | chr5_3:13747832-13747851 | None:intergenic | 40.0% | |
| AATTTGAAGAAGGTGGTGAG+TGG | + | chr5_3:13747928-13747947 | None:intergenic | 40.0% | |
| GAAGGGCTTGAATTTGAAGA+AGG | + | chr5_3:13747938-13747957 | None:intergenic | 40.0% | |
| ! | AAAGGGTGCGTGATAAAAAG+GGG | + | chr5_3:13747986-13748005 | None:intergenic | 40.0% |
| ! | ATTAGAAGCGCGGCTTAAAA+GGG | + | chr5_3:13748003-13748022 | None:intergenic | 40.0% |
| ATGGGCAAGCTGTGAAAAAT+GGG | - | chr5_3:13748255-13748274 | Msa0800380:intron | 40.0% | |
| !!! | TGGGGTTGATTTTGTTTTGC+CGG | - | chr5_3:13748274-13748293 | Msa0800380:intron | 40.0% |
| ! | TGAACCAACGAATTTTCCAC+CGG | + | chr5_3:13748296-13748315 | None:intergenic | 40.0% |
| TCATATGTATGGTTCTTGCG+GGG | - | chr5_3:13748313-13748332 | Msa0800380:intron | 40.0% | |
| TAGGGTGATGTTTGATGGAA+TGG | - | chr5_3:13748349-13748368 | Msa0800380:intron | 40.0% | |
| TGTTTGATGGAATGGTGAGT+CGG | - | chr5_3:13748357-13748376 | Msa0800380:intron | 40.0% | |
| TCGTGGAACTCAATGATTGA+TGG | - | chr5_3:13748389-13748408 | Msa0800380:intron | 40.0% | |
| CGTGGAACTCAATGATTGAT+GGG | - | chr5_3:13748390-13748409 | Msa0800380:intron | 40.0% | |
| !!! | TTAGTGGGTTTTTGAAGGGT+AGG | - | chr5_3:13748498-13748517 | Msa0800380:intron | 40.0% |
| !! | TTTTTGAAGGGTAGGAATCC+TGG | - | chr5_3:13748506-13748525 | Msa0800380:intron | 40.0% |
| AACAACTTCAACGCATAACC+AGG | + | chr5_3:13748527-13748546 | None:intergenic | 40.0% | |
| TAGAGGGAATGATAGGACTA+TGG | - | chr5_3:13748571-13748590 | Msa0800380:CDS | 40.0% | |
| ! | TGATAGGACTATGGTTTGTG+TGG | - | chr5_3:13748580-13748599 | Msa0800380:CDS | 40.0% |
| ! | GACTATGGTTTGTGTGGTTA+CGG | - | chr5_3:13748586-13748605 | Msa0800380:CDS | 40.0% |
| !! | CGGCTAGTAAAGTTTTTGAG+AGG | - | chr5_3:13748741-13748760 | Msa0800380:intron | 40.0% |
| GAGGATGAGTAGTAGGAATT+TGG | - | chr5_3:13748760-13748779 | Msa0800380:intron | 40.0% | |
| ! | GTAGTAGGAATTTGGTTTCG+TGG | - | chr5_3:13748768-13748787 | Msa0800380:intron | 40.0% |
| ! | CGTGGAATGCAATGATTTTG+GGG | - | chr5_3:13748786-13748805 | Msa0800380:intron | 40.0% |
| ATGAAAGTCCAAGTGCAGAT+AGG | - | chr5_3:13748897-13748916 | Msa0800380:intron | 40.0% | |
| TGAAAGTCCAAGTGCAGATA+GGG | - | chr5_3:13748898-13748917 | Msa0800380:intron | 40.0% | |
| ! | AGCCGAATTTCGCTCATTTT+TGG | - | chr5_3:13749044-13749063 | Msa0800380:intron | 40.0% |
| TCTCACAGGAGTCATTGTTA+TGG | - | chr5_3:13749152-13749171 | Msa0800380:intron | 40.0% | |
| CTCACAGGAGTCATTGTTAT+GGG | - | chr5_3:13749153-13749172 | Msa0800380:intron | 40.0% | |
| ! | TTGTTATGGGCAAGTTTGCT+CGG | - | chr5_3:13749166-13749185 | Msa0800380:intron | 40.0% |
| CAAGAGAGATGTGTACTTAG+GGG | - | chr5_3:13749201-13749220 | Msa0800380:intron | 40.0% | |
| TGCCAAACTTCTTGTTGACA+TGG | - | chr5_3:13749231-13749250 | Msa0800380:five_prime_UTR | 40.0% | |
| TGGTAATAGGCTAGGTTCTT+AGG | + | chr5_3:13749259-13749278 | None:intergenic | 40.0% | |
| ! | AGGAGTGCAAAAACTGATGA+AGG | - | chr5_3:13749327-13749346 | Msa0800380:five_prime_UTR | 40.0% |
| !! | TGCTGATTCTGGACAATCAT+CGG | - | chr5_3:13749498-13749517 | Msa0800380:five_prime_UTR | 40.0% |
| !! | CTGGTTTTTGCAATTCTCTC+TGG | + | chr5_3:13749528-13749547 | None:intergenic | 40.0% |
| CAGAGAGAATTGCAAAAACC+AGG | - | chr5_3:13749526-13749545 | Msa0800380:five_prime_UTR | 40.0% | |
| AAACAACCACTGAACAACCT+TGG | - | chr5_3:13749637-13749656 | Msa0800380:five_prime_UTR | 40.0% | |
| TTGATTGAAATTCCACTGGG+TGG | - | chr5_3:13749849-13749868 | Msa0800380:five_prime_UTR | 40.0% | |
| !! | GGCCGCATTTCATTTTTCAA+TGG | + | chr5_3:13750018-13750037 | None:intergenic | 40.0% |
| TTGTATGCAGGATATGGGTT+GGG | + | chr5_3:13750653-13750672 | None:intergenic | 40.0% | |
| TTTGTATGCAGGATATGGGT+TGG | + | chr5_3:13750654-13750673 | None:intergenic | 40.0% | |
| !! | ACAGAATAGGGTGTTGAACT+TGG | + | chr5_3:13750703-13750722 | None:intergenic | 40.0% |
| AGAAGGACAAATATGAGAGG+TGG | + | chr5_3:13750736-13750755 | None:intergenic | 40.0% | |
| ACGGAAAACTCATTTGACGA+AGG | - | chr5_3:13750950-13750969 | Msa0800380:five_prime_UTR | 40.0% | |
| AACTGACCGAAAAATTCCAC+TGG | + | chr5_3:13751058-13751077 | None:intergenic | 40.0% | |
| GGTATTGTTGGAGAAGAAAG+GGG | + | chr5_3:13751115-13751134 | None:intergenic | 40.0% | |
| AATGCTTCTGCTATGACTAG+AGG | - | chr5_3:13751173-13751192 | Msa0800380:five_prime_UTR | 40.0% | |
| GCTATGACTAGAGGAACTAT+TGG | - | chr5_3:13751182-13751201 | Msa0800380:five_prime_UTR | 40.0% | |
| AATGGTTTATCACCAAGGCA+AGG | - | chr5_3:13751430-13751449 | Msa0800380:five_prime_UTR | 40.0% | |
| TGATGAGATTGAGATGGTGA+AGG | - | chr5_3:13751965-13751984 | Msa0800380:five_prime_UTR | 40.0% | |
| AAAGTGGCGAGAGTAGATTC+TGG | + | chr5_3:13747766-13747785 | None:intergenic | 45.0% | |
| ! | TGAGTGGTTTGGCAATGAGA+AGG | + | chr5_3:13747912-13747931 | None:intergenic | 45.0% |
| GGGCTTGAATTTGAAGAAGG+TGG | + | chr5_3:13747935-13747954 | None:intergenic | 45.0% | |
| TGCGTGATAAAAAGGGGTTG+CGG | + | chr5_3:13747980-13747999 | None:intergenic | 45.0% | |
| ! | GATTAGAAGCGCGGCTTAAA+AGG | + | chr5_3:13748004-13748023 | None:intergenic | 45.0% |
| CATGGGCAAGCTGTGAAAAA+TGG | - | chr5_3:13748254-13748273 | Msa0800380:intron | 45.0% | |
| TGGGCAAGCTGTGAAAAATG+GGG | - | chr5_3:13748256-13748275 | Msa0800380:intron | 45.0% | |
| !!! | GGTTGATTTTGTTTTGCCGG+TGG | - | chr5_3:13748277-13748296 | Msa0800380:intron | 45.0% |
| TTTGCCGGTGGAAAATTCGT+TGG | - | chr5_3:13748289-13748308 | Msa0800380:intron | 45.0% | |
| GTTGCTAGGGTGATGTTTGA+TGG | - | chr5_3:13748344-13748363 | Msa0800380:intron | 45.0% | |
| GTTTGATGGAATGGTGAGTC+GGG | - | chr5_3:13748358-13748377 | Msa0800380:intron | 45.0% | |
| ATGGGTCGACTGAGAATTAG+AGG | - | chr5_3:13748554-13748573 | Msa0800380:CDS | 45.0% | |
| TGGGTCGACTGAGAATTAGA+GGG | - | chr5_3:13748555-13748574 | Msa0800380:CDS | 45.0% | |
| ! | CGGTTCATGGGAGTATGATT+AGG | - | chr5_3:13748645-13748664 | Msa0800380:intron | 45.0% |
| TTGTAAATGCGGGAGAGTTG+AGG | - | chr5_3:13748718-13748737 | Msa0800380:intron | 45.0% | |
| !!! | ATTTTGGGGCATTGCATCCA+TGG | - | chr5_3:13748800-13748819 | Msa0800380:intron | 45.0% |
| !!! | TTTTGGGGCATTGCATCCAT+GGG | - | chr5_3:13748801-13748820 | Msa0800380:intron | 45.0% |
| GAGTGTGAAAGGTGAAGTTG+AGG | - | chr5_3:13748871-13748890 | Msa0800380:intron | 45.0% | |
| GAAAGTCCAAGTGCAGATAG+GGG | - | chr5_3:13748899-13748918 | Msa0800380:intron | 45.0% | |
| AAATGTGGGGCTTATTGACG+AGG | - | chr5_3:13749087-13749106 | Msa0800380:intron | 45.0% | |
| GCAGAAACTGGTAATAGGCT+AGG | + | chr5_3:13749267-13749286 | None:intergenic | 45.0% | |
| TTTATGCAGTGGCTGCTCAA+TGG | - | chr5_3:13749293-13749312 | Msa0800380:five_prime_UTR | 45.0% | |
| TTATGCAGTGGCTGCTCAAT+GGG | - | chr5_3:13749294-13749313 | Msa0800380:five_prime_UTR | 45.0% | |
| GCTCAATGGGAGAATGTTTC+AGG | - | chr5_3:13749307-13749326 | Msa0800380:five_prime_UTR | 45.0% | |
| AATACCCGGAAGCAATCTTG+TGG | - | chr5_3:13749366-13749385 | Msa0800380:five_prime_UTR | 45.0% | |
| AAGTCCACAAGATTGCTTCC+GGG | + | chr5_3:13749373-13749392 | None:intergenic | 45.0% | |
| CAAGTCCACAAGATTGCTTC+CGG | + | chr5_3:13749374-13749393 | None:intergenic | 45.0% | |
| GATTGTCCAGAATCAGCACA+AGG | + | chr5_3:13749496-13749515 | None:intergenic | 45.0% | |
| TGATTCTGGACAATCATCGG+TGG | - | chr5_3:13749501-13749520 | Msa0800380:five_prime_UTR | 45.0% | |
| AGGTAGCTGCAAGTTTCTCA+TGG | - | chr5_3:13749677-13749696 | Msa0800380:five_prime_UTR | 45.0% | |
| GGTAGCTGCAAGTTTCTCAT+GGG | - | chr5_3:13749678-13749697 | Msa0800380:five_prime_UTR | 45.0% | |
| GTAGCTGCAAGTTTCTCATG+GGG | - | chr5_3:13749679-13749698 | Msa0800380:five_prime_UTR | 45.0% | |
| !! | TTTCTCATGGGGCATCGATA+CGG | - | chr5_3:13749690-13749709 | Msa0800380:five_prime_UTR | 45.0% |
| AAAACGCCATGCACCAGAAT+CGG | + | chr5_3:13749877-13749896 | None:intergenic | 45.0% | |
| CAAACTACCTCGATACCTTG+TGG | + | chr5_3:13749978-13749997 | None:intergenic | 45.0% | |
| ! | GATTTTGTGCCAATGCTGTC+AGG | - | chr5_3:13750078-13750097 | Msa0800380:five_prime_UTR | 45.0% |
| TCAACGTTTCCTGACAGCAT+TGG | + | chr5_3:13750090-13750109 | None:intergenic | 45.0% | |
| ! | TGTTTGTCTGAGATCGTTCC+TGG | - | chr5_3:13750263-13750282 | Msa0800380:five_prime_UTR | 45.0% |
| ! | GTTTGTCTGAGATCGTTCCT+GGG | - | chr5_3:13750264-13750283 | Msa0800380:five_prime_UTR | 45.0% |
| TCAACATTAGCATCACCACC+AGG | - | chr5_3:13750560-13750579 | Msa0800380:five_prime_UTR | 45.0% | |
| AAGAGCAACATCAAACCTGG+TGG | + | chr5_3:13750578-13750597 | None:intergenic | 45.0% | |
| !! | CAGGATATGGGTTGGGTTTA+TGG | + | chr5_3:13750646-13750665 | None:intergenic | 45.0% |
| TCCGACAAAGGAACAAGAGA+CGG | - | chr5_3:13751025-13751044 | Msa0800380:five_prime_UTR | 45.0% | |
| GGAACTATTGGGTTTGTGCA+TGG | - | chr5_3:13751194-13751213 | Msa0800380:five_prime_UTR | 45.0% | |
| TTTATCACCAAGGCAAGGAC+TGG | - | chr5_3:13751435-13751454 | Msa0800380:five_prime_UTR | 45.0% | |
| GACAGAGTTTGTGCACTTTC+TGG | - | chr5_3:13751930-13751949 | Msa0800380:five_prime_UTR | 45.0% | |
| TGGTGAAGGCAAGAAACAGA+AGG | - | chr5_3:13751979-13751998 | Msa0800380:five_prime_UTR | 45.0% | |
| GGTGAAGGCAAGAAACAGAA+GGG | - | chr5_3:13751980-13751999 | Msa0800380:five_prime_UTR | 45.0% | |
| TGGATGAACATGCTCGTGCT+CGG | + | chr5_3:13747684-13747703 | None:intergenic | 50.0% | |
| AGCACGAGCATGTTCATCCA+TGG | - | chr5_3:13747684-13747703 | Msa0800380:CDS | 50.0% | |
| TGAAAGGTGGTGAATCGCCA+TGG | + | chr5_3:13747704-13747723 | None:intergenic | 50.0% | |
| GGTTACGGAAGGGGAAAAAG+TGG | + | chr5_3:13747782-13747801 | None:intergenic | 50.0% | |
| AGAAGAAGGGGTTACGGAAG+GGG | + | chr5_3:13747791-13747810 | None:intergenic | 50.0% | |
| GAGAAGAAGGGGTTACGGAA+GGG | + | chr5_3:13747792-13747811 | None:intergenic | 50.0% | |
| TGAGAAGAAGGGGTTACGGA+AGG | + | chr5_3:13747793-13747812 | None:intergenic | 50.0% | |
| GAAGAAGGTGGTGAGTGGTT+TGG | + | chr5_3:13747923-13747942 | None:intergenic | 50.0% | |
| CTGTGCAGAGATTAGAAGCG+CGG | + | chr5_3:13748013-13748032 | None:intergenic | 50.0% | |
| TGGAATGGTGAGTCGGGATT+TGG | - | chr5_3:13748364-13748383 | Msa0800380:intron | 50.0% | |
| ! | TGAGTCGGGATTTGGTTTCG+TGG | - | chr5_3:13748372-13748391 | Msa0800380:intron | 50.0% |
| GTTTGTGTGGTTACGGCTTG+TGG | - | chr5_3:13748593-13748612 | Msa0800380:CDS | 50.0% | |
| CGGTCGGGTAGACTTATAGA+AGG | - | chr5_3:13748617-13748636 | Msa0800380:CDS | 50.0% | |
| TAAATGCGGGAGAGTTGAGG+CGG | - | chr5_3:13748721-13748740 | Msa0800380:intron | 50.0% | |
| TTGCATCCATGGGAATCCTG+AGG | - | chr5_3:13748811-13748830 | Msa0800380:intron | 50.0% | |
| ATCCATGGGAATCCTGAGGA+TGG | - | chr5_3:13748815-13748834 | Msa0800380:intron | 50.0% | |
| AACAAGCTCAGTCCATCCTC+AGG | + | chr5_3:13748830-13748849 | None:intergenic | 50.0% | |
| ! | GTTGGGATGGAGAGTGTGAA+AGG | - | chr5_3:13748860-13748879 | Msa0800380:intron | 50.0% |
| TCCAAGTGCAGATAGGGGTT+TGG | - | chr5_3:13748904-13748923 | Msa0800380:intron | 50.0% | |
| ACCAAACCCCTATCTGCACT+TGG | + | chr5_3:13748908-13748927 | None:intergenic | 50.0% | |
| GCATTCTTTGTGCGTGTGCT+CGG | - | chr5_3:13748960-13748979 | Msa0800380:intron | 50.0% | |
| CATTCTTTGTGCGTGTGCTC+GGG | - | chr5_3:13748961-13748980 | Msa0800380:intron | 50.0% | |
| CAACCACTGAACAACCTTGG+AGG | - | chr5_3:13749640-13749659 | Msa0800380:five_prime_UTR | 50.0% | |
| GATCCTCCAAGGTTGTTCAG+TGG | + | chr5_3:13749646-13749665 | None:intergenic | 50.0% | |
| AGACAGAGCTGCTGACACAA+AGG | + | chr5_3:13750121-13750140 | None:intergenic | 50.0% | |
| GATGGTGCTCATCGATGAGA+AGG | - | chr5_3:13750372-13750391 | Msa0800380:five_prime_UTR | 50.0% | |
| AGAGAGTCGACAAGAGCAAG+AGG | - | chr5_3:13750983-13751002 | Msa0800380:five_prime_UTR | 50.0% | |
| CCCGTCTCTTGTTCCTTTGT+CGG | + | chr5_3:13751029-13751048 | None:intergenic | 50.0% | |
| CCGACAAAGGAACAAGAGAC+GGG | - | chr5_3:13751026-13751045 | Msa0800380:five_prime_UTR | 50.0% | |
| AAGAGACGGGAAAACACCAG+TGG | - | chr5_3:13751039-13751058 | Msa0800380:five_prime_UTR | 50.0% | |
| TAAGGATCCAGTCCTTGCCT+TGG | + | chr5_3:13751445-13751464 | None:intergenic | 50.0% | |
| !! | AGAACTCACCGTAACGGGTG+CGG | - | chr5_3:13747644-13747663 | Msa0800380:CDS | 55.0% |
| GGCGTGAGAAGAAGGGGTTA+CGG | + | chr5_3:13747797-13747816 | None:intergenic | 55.0% | |
| TGATGGGGCGTGAGAAGAAG+GGG | + | chr5_3:13747803-13747822 | None:intergenic | 55.0% | |
| ! | GTGATGGGGCGTGAGAAGAA+GGG | + | chr5_3:13747804-13747823 | None:intergenic | 55.0% |
| ! | AGTGATGGGGCGTGAGAAGA+AGG | + | chr5_3:13747805-13747824 | None:intergenic | 55.0% |
| GTATGGTTCTTGCGGGGATG+TGG | - | chr5_3:13748319-13748338 | Msa0800380:intron | 55.0% | |
| ! | GTGACTTGAGTGCTGCACAC+AGG | - | chr5_3:13748426-13748445 | Msa0800380:intron | 55.0% |
| GTGTGGTTACGGCTTGTGGA+CGG | - | chr5_3:13748597-13748616 | Msa0800380:CDS | 55.0% | |
| GTCCATCCTCAGGATTCCCA+TGG | + | chr5_3:13748820-13748839 | None:intergenic | 55.0% | |
| !! | GTGCAGATAGGGGTTTGGTG+AGG | - | chr5_3:13748909-13748928 | Msa0800380:intron | 55.0% |
| CGGAACTGTTGAGTGAAGGC+AGG | - | chr5_3:13748984-13749003 | Msa0800380:intron | 55.0% | |
| GTGTCAAACAATCGGCGCGA+AGG | - | chr5_3:13749418-13749437 | Msa0800380:five_prime_UTR | 55.0% | |
| !! | GGGTTGCCTTGTGCTGATTC+TGG | - | chr5_3:13749487-13749506 | Msa0800380:five_prime_UTR | 55.0% |
| ! | ATTCTGTGGGCACTGCCACA+AGG | - | chr5_3:13749960-13749979 | Msa0800380:five_prime_UTR | 55.0% |
| TCGTTCCTGGGAAAGATGCG+TGG | - | chr5_3:13750276-13750295 | Msa0800380:five_prime_UTR | 55.0% | |
| TTCCTGGGAAAGATGCGTGG+AGG | - | chr5_3:13750279-13750298 | Msa0800380:five_prime_UTR | 55.0% | |
| ATCCTCCACGCATCTTTCCC+AGG | + | chr5_3:13750284-13750303 | None:intergenic | 55.0% | |
| GATGCACACCGCACCCGTTA+CGG | + | chr5_3:13747655-13747674 | None:intergenic | 60.0% | |
| TGGTTCTTGCGGGGATGTGG+AGG | - | chr5_3:13748322-13748341 | Msa0800380:intron | 60.0% | |
| CGGGGATGTGGAGGTTGCTA+GGG | - | chr5_3:13748331-13748350 | Msa0800380:intron | 60.0% | |
| GGTTACGGCTTGTGGACGGT+CGG | - | chr5_3:13748601-13748620 | Msa0800380:CDS | 60.0% | |
| GTTACGGCTTGTGGACGGTC+GGG | - | chr5_3:13748602-13748621 | Msa0800380:CDS | 60.0% | |
| TCTTTGTGCGTGTGCTCGGG+CGG | - | chr5_3:13748964-13748983 | Msa0800380:intron | 60.0% | |
| CGGGCGGAACTGTTGAGTGA+AGG | - | chr5_3:13748980-13748999 | Msa0800380:intron | 60.0% | |
| GTGGCTCCGATTCTGGTGCA+TGG | - | chr5_3:13749868-13749887 | Msa0800380:five_prime_UTR | 60.0% | |
| !! | GGCACTGCCACAAGGTATCG+AGG | - | chr5_3:13749968-13749987 | Msa0800380:five_prime_UTR | 60.0% |
| GCGGGGATGTGGAGGTTGCT+AGG | - | chr5_3:13748330-13748349 | Msa0800380:intron | 65.0% | |
| CCAGAATCGGAGCCACCCAG+TGG | + | chr5_3:13749864-13749883 | None:intergenic | 65.0% | |
| CCACTGGGTGGCTCCGATTC+TGG | - | chr5_3:13749861-13749880 | Msa0800380:five_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 13747590 | 13752007 | 13747590 | ID=Msa0800380;Name=Msa0800380 |
| chr5_3 | mRNA | 13747590 | 13752007 | 13747590 | ID=Msa0800380-mRNA-1;Parent=Msa0800380;Name=Msa0800380-mRNA-1;_AED=0.07;_eAED=0.10;_QI=2796|0|0.33|1|0|0.33|3|0|98 |
| chr5_3 | exon | 13747590 | 13747770 | 13747590 | ID=Msa0800380-mRNA-1:exon:5754;Parent=Msa0800380-mRNA-1 |
| chr5_3 | exon | 13748540 | 13748647 | 13748540 | ID=Msa0800380-mRNA-1:exon:5753;Parent=Msa0800380-mRNA-1 |
| chr5_3 | exon | 13749204 | 13752007 | 13749204 | ID=Msa0800380-mRNA-1:exon:5752;Parent=Msa0800380-mRNA-1 |
| chr5_3 | five_prime_UTR | 13749212 | 13752007 | 13749212 | ID=Msa0800380-mRNA-1:five_prime_utr;Parent=Msa0800380-mRNA-1 |
| chr5_3 | CDS | 13749204 | 13749211 | 13749204 | ID=Msa0800380-mRNA-1:cds;Parent=Msa0800380-mRNA-1 |
| chr5_3 | CDS | 13748540 | 13748647 | 13748540 | ID=Msa0800380-mRNA-1:cds;Parent=Msa0800380-mRNA-1 |
| chr5_3 | CDS | 13747590 | 13747770 | 13747590 | ID=Msa0800380-mRNA-1:cds;Parent=Msa0800380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
