AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0487420


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0487420 MtrunA17_Chr3g0080991 74.878 617 62 6 1 556 1441 2025 1.28e-163 514
Msa0487420 MtrunA17_Chr3g0080991 77.922 154 15 4 105 239 1985 2138 6.94e-44 168
Msa0487420 MtrunA17_Chr3g0119021 36.269 193 96 8 46 237 145 311 5.20e-24 106
Msa0487420 MtrunA17_Chr3g0119021 34.197 193 101 7 17 209 145 311 3.21e-22 100
Msa0487420 MtrunA17_Chr3g0119021 33.333 135 82 4 16 150 185 311 7.38e-14 74.3
Msa0487420 MtrunA17_Chr5g0439981 28.261 276 148 7 17 252 281 546 2.70e-23 104
Msa0487420 MtrunA17_Chr3g0145151 31.818 220 90 6 17 209 70 256 4.52e-21 93.6
Msa0487420 MtrunA17_Chr3g0145151 31.193 218 88 6 48 237 53 236 2.90e-20 90.9
Msa0487420 MtrunA17_Chr3g0145141 32.189 233 95 8 17 237 73 254 1.04e-19 89.4
Msa0487420 MtrunA17_Chr3g0145141 29.381 194 94 5 74 237 53 233 1.01e-16 80.5
Msa0487420 MtrunA17_Chr8g0371801 41.714 175 59 5 106 241 105 275 3.62e-19 87.8
Msa0487420 MtrunA17_Chr8g0371801 42.529 174 60 5 77 213 105 275 3.98e-19 87.8
Msa0487420 MtrunA17_Chr8g0371801 41.714 175 59 5 48 183 105 275 7.34e-19 87.0
Msa0487420 MtrunA17_Chr8g0371801 40.805 174 62 5 19 154 105 275 2.82e-18 85.5
Msa0487420 MtrunA17_Chr8g0371801 47.656 128 51 4 136 251 105 228 1.28e-15 77.4
Msa0487420 MtrunA17_Chr8g0371801 42.754 138 45 4 18 124 141 275 5.37e-14 72.8
Msa0487420 MtrunA17_Chr1g0203191 29.101 189 113 7 98 281 61 233 7.31e-14 72.0
Msa0487420 MtrunA17_Chr1g0203191 30.488 164 98 5 40 200 61 211 1.01e-13 71.6
Msa0487420 MtrunA17_Chr1g0203191 30.612 147 89 4 14 160 64 197 5.16e-12 66.6
Msa0487420 MtrunA17_Chr1g0203191 30.380 158 94 6 69 224 61 204 2.04e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0487420 AT4G36020.1 49.261 203 82 8 48 237 102 296 7.98e-44 158
Msa0487420 AT4G36020.1 47.549 204 85 6 19 209 102 296 2.57e-43 157
Msa0487420 AT4G36020.1 48.333 120 50 4 5 120 185 296 7.93e-22 96.7
Msa0487420 AT4G36020.1 46.218 119 53 3 136 243 102 220 2.56e-21 95.1
Msa0487420 AT4G36020.3 49.261 203 82 8 48 237 102 296 7.98e-44 158
Msa0487420 AT4G36020.3 47.549 204 85 6 19 209 102 296 2.57e-43 157
Msa0487420 AT4G36020.3 48.333 120 50 4 5 120 185 296 7.93e-22 96.7
Msa0487420 AT4G36020.3 46.218 119 53 3 136 243 102 220 2.56e-21 95.1
Msa0487420 AT4G36020.2 50.296 169 68 6 77 237 102 262 1.86e-36 137
Msa0487420 AT4G36020.2 48.824 170 70 5 48 209 102 262 6.41e-36 135
Msa0487420 AT4G36020.2 47.647 170 71 6 19 179 102 262 5.40e-34 130
Msa0487420 AT4G36020.2 47.934 121 51 4 4 120 150 262 2.70e-22 97.4
Msa0487420 AT2G17870.1 51.675 209 83 5 16 209 93 298 1.08e-27 113
Msa0487420 AT2G17870.1 51.415 212 84 6 42 237 90 298 1.33e-27 113
Msa0487420 AT2G17870.1 51.648 182 72 4 71 238 90 269 1.28e-24 104
Msa0487420 AT2G17870.1 54.128 109 47 3 13 120 192 298 7.46e-11 63.9
Msa0487420 AT3G43590.1 28.674 279 141 11 18 280 167 403 2.03e-20 95.5
Msa0487420 AT3G43590.1 31.973 147 81 6 16 150 233 372 9.73e-12 68.2
Msa0487420 AT1G75560.2 31.696 224 95 8 45 268 54 219 5.51e-20 90.5
Msa0487420 AT1G75560.2 30.435 207 89 6 16 222 54 205 3.13e-17 82.4
Msa0487420 AT1G75560.2 30.233 215 83 7 18 209 75 245 2.59e-15 76.6
Msa0487420 AT1G75560.1 31.696 224 95 8 45 268 54 219 5.51e-20 90.5
Msa0487420 AT1G75560.1 30.435 207 89 6 16 222 54 205 3.13e-17 82.4
Msa0487420 AT1G75560.1 30.233 215 83 7 18 209 75 245 2.59e-15 76.6
Msa0487420 AT3G42860.1 41.322 121 57 3 103 209 236 356 2.17e-19 90.9
Msa0487420 AT3G42860.1 39.062 128 62 3 126 237 229 356 4.33e-19 89.7
Msa0487420 AT3G42860.1 38.760 129 63 4 8 120 228 356 1.75e-18 88.2

Find 338 sgRNAs with CRISPR-Local

Find 544 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCACCTCCACCACCTTCT+TGG 0.185459 3_4:+6304301 None:intergenic
CTTCTGGTGGTGCGAGTAAA+TGG 0.191497 3_4:-6303383 Msa0487420:CDS
GGTGGTGGAGGTGGAGGGAG+GGG 0.222281 3_4:-6304294 Msa0487420:CDS
CTCCACCTCCACCGCCCTCT+TGG 0.226886 3_4:+6304478 None:intergenic
CTCCACCTCCACCGCCCTCT+TGG 0.226886 3_4:+6304655 None:intergenic
CCCTTCCTCCACCACCCTCC+TGG 0.242378 3_4:+6303163 None:intergenic
GGTGGTGGAGGTGGAGGGAG+AGG 0.252019 3_4:-6304735 Msa0487420:CDS
AGGAGAGTGGTGGTGGAGGG+TGG 0.263253 3_4:-6304215 Msa0487420:CDS
GGGAGGGGAGGTGGCGGTGG+TGG 0.265333 3_4:-6304372 Msa0487420:CDS
GGTGGTGGAGGAAGGGGAGG+TGG 0.271844 3_4:-6303156 Msa0487420:CDS
GGTGGAGGAAGGGGTGGTGG+TGG 0.273853 3_4:-6304462 Msa0487420:CDS
GGTGGAGGAAGGGGTGGTGG+TGG 0.273853 3_4:-6304639 Msa0487420:CDS
GGTGGTGGTGGAGGGAGGGG+AGG 0.275508 3_4:-6304384 Msa0487420:CDS
AGTGGTGGTGGAGGGTGGGG+TGG 0.279758 3_4:-6304210 Msa0487420:CDS
TCCCTCCACCACCACCCTCT+TGG 0.283301 3_4:+6304391 None:intergenic
TCCCTCCACCACCACCCTCT+TGG 0.283301 3_4:+6304568 None:intergenic
ACCCTCCACCACCACTCTCC+TGG 0.284636 3_4:+6304217 None:intergenic
GACATGGAAATTTAGAATTC+AGG 0.290086 3_4:-6302170 Msa0487420:CDS
CCCTCCACCACCACCCTCTT+GGG 0.290297 3_4:+6304392 None:intergenic
CCCTCCACCACCACCCTCTT+GGG 0.290297 3_4:+6304569 None:intergenic
TCCACCTCCACCACCTTCTT+GGG 0.290342 3_4:+6304302 None:intergenic
GGAGGGAGGGGTGGTGGCGG+TGG 0.291000 3_4:-6304552 Msa0487420:CDS
GGTGGTGGAGGTGGAGGAAG+GGG 0.296899 3_4:-6304822 Msa0487420:CDS
CTCCACCTCCACCACCCTCT+TGG 0.297226 3_4:+6304742 None:intergenic
GGCGGTGGAGGTGGAGGAAG+GGG 0.297326 3_4:-6304471 Msa0487420:CDS
GGCGGTGGAGGTGGAGGAAG+GGG 0.297326 3_4:-6304648 Msa0487420:CDS
GGTGGTGGTGGAGGGAGGGG+TGG 0.301066 3_4:-6304561 Msa0487420:CDS
GAGGGTGGTGGTGGAGGGAG+GGG 0.304775 3_4:-6304564 Msa0487420:CDS
GGAAGGGGAGGTGGTGGACG+AGG 0.307459 3_4:-6303147 Msa0487420:CDS
CGAGGAGGCGGAAGAGGTGG+TGG 0.308524 3_4:-6303129 Msa0487420:CDS
GGGAGGGGTGGTGGCGGTGG+TGG 0.309236 3_4:-6304549 Msa0487420:CDS
CTCCACCTCCACCACCCTCT+TGG 0.309544 3_4:+6304829 None:intergenic
GGAGGGAGGGGAGGTGGCGG+TGG 0.309624 3_4:-6304375 Msa0487420:CDS
GGTGGTGGAGGGAGGGGTGG+TGG 0.310955 3_4:-6304558 Msa0487420:CDS
GAGAGTGGTGGTGGAGGGTG+GGG 0.312348 3_4:-6304213 Msa0487420:CDS
GGTGGTGGAGGGAGGGGAGG+TGG 0.316222 3_4:-6304381 Msa0487420:CDS
CCATGTCCAACCAAGATTAC+TGG 0.316752 3_4:+6302186 None:intergenic
CAAGAAAGCAATACGGAAAA+AGG 0.316994 3_4:-6303492 Msa0487420:CDS
GGTGGAGGTGGAGGAAGGGG+TGG 0.324576 3_4:-6304819 Msa0487420:CDS
GGAGGTGGAGGAAGGGGTGG+TGG 0.324839 3_4:-6304816 Msa0487420:CDS
CGCGGTCGTGGTCGTGGTGG+TGG 0.326242 3_4:-6304900 Msa0487420:CDS
AATATATCAGAAGGAAGTTT+CGG 0.327753 3_4:-6302218 Msa0487420:intron
GGTGGAGGAAGGGGAGGTGG+TGG 0.331646 3_4:-6303153 Msa0487420:CDS
GGAGGTGGAGGAAGGGGTGG+TGG 0.333307 3_4:-6304465 Msa0487420:CDS
GGAGGTGGAGGAAGGGGTGG+TGG 0.333307 3_4:-6304642 Msa0487420:CDS
TCCACCTCCACCGCCCTCTT+GGG 0.334772 3_4:+6304479 None:intergenic
TCCACCTCCACCGCCCTCTT+GGG 0.334772 3_4:+6304656 None:intergenic
TCTGGATGGGGTGCTGCTCC+TGG 0.336527 3_4:-6303941 Msa0487420:CDS
CAATACAACTGAAGCTGGTT+GGG 0.337736 3_4:-6303657 Msa0487420:CDS
GGTAGTGGATGGGGAGGGAC+TGG 0.338643 3_4:-6304067 Msa0487420:CDS
GGCTCAGTTGCCAGTAATCT+TGG 0.340296 3_4:-6302196 Msa0487420:CDS
TCCACCTCCACCACCCTCTT+GGG 0.345489 3_4:+6304743 None:intergenic
TCCACCTCCACCACCCTCTT+GGG 0.345489 3_4:+6304830 None:intergenic
ATATATCAGAAGGAAGTTTC+GGG 0.347909 3_4:-6302217 Msa0487420:intron
GGAGGGTGGGGTGGCAGCGG+TGG 0.349671 3_4:-6304201 Msa0487420:CDS
CAGGAGGGTGGTGGAGGAAG+GGG 0.350288 3_4:-6303162 Msa0487420:CDS
ATTTCCAGCTCCACCGTTGC+TGG 0.350513 3_4:+6303449 None:intergenic
GGGAGTGGATGGGGAGGGAC+TGG 0.352801 3_4:-6303345 Msa0487420:CDS
GAGGGTGGTGGTGGAGGGAG+GGG 0.352879 3_4:-6304387 Msa0487420:CDS
AAGAGGGTGGTGGTGGAGGG+AGG 0.360137 3_4:-6304566 Msa0487420:CDS
TGGGGTGGCAGCGGTGGACG+TGG 0.362388 3_4:-6304195 Msa0487420:CDS
GGAGGTGGAGGGAGGGGCAG+CGG 0.362598 3_4:-6304288 Msa0487420:CDS
GGATCTGGAAATGAAAATTC+TGG 0.364032 3_4:-6303959 Msa0487420:CDS
AAGAGGGTGGTGGTGGAGGG+AGG 0.367572 3_4:-6304389 Msa0487420:CDS
AGCTACTGGTGGTAAAAGTT+GGG 0.368679 3_4:-6303879 Msa0487420:CDS
GAGCTACTGGTGGTAAAAGT+TGG 0.368811 3_4:-6303880 Msa0487420:CDS
GAGGGACTGGTGGTAAAAGT+TGG 0.369358 3_4:-6303332 Msa0487420:CDS
GAGGGACTGGTGGTAAAAGT+TGG 0.369358 3_4:-6304054 Msa0487420:CDS
GGAGGTGGAGGGAGAGGCGG+TGG 0.369384 3_4:-6304729 Msa0487420:CDS
TTCTGGTGGTGCGAGTAAAT+GGG 0.373549 3_4:-6303382 Msa0487420:CDS
GGTGGAGGGAGGGGTGGTGG+CGG 0.374969 3_4:-6304555 Msa0487420:CDS
GGTGGAGGGTGGGGTGGCAG+CGG 0.375355 3_4:-6304204 Msa0487420:CDS
CCCTCCACCACCACTCTCCT+GGG 0.380469 3_4:+6304218 None:intergenic
GGAGGTGGTAGAGGTGGTGG+TGG 0.380856 3_4:-6303234 Msa0487420:CDS
CTCTGGTGGCGAGAGTGGAT+GGG 0.381885 3_4:-6303729 Msa0487420:CDS
CTCTGGTGGCGAGAGTGGAT+GGG 0.381885 3_4:-6303903 Msa0487420:CDS
GCGGTCGTGGTCGTGGTGGT+GGG 0.383057 3_4:-6304899 Msa0487420:CDS
ACTCTCCTGGGTGCACTCCC+TGG 0.383345 3_4:+6304230 None:intergenic
GGTGGAGGGAGGGGAGGTGG+CGG 0.383367 3_4:-6304378 Msa0487420:CDS
GGTGGAGGGAGAGGCGGTGG+CGG 0.384546 3_4:-6304726 Msa0487420:CDS
GGAGGTGGTGGACGAGGAGG+CGG 0.385575 3_4:-6303141 Msa0487420:CDS
CAAGAGGGTGGTGGAGGTGG+AGG 0.386517 3_4:-6304741 Msa0487420:CDS
ACCCAAGAGGGTGGTGGTGG+AGG 0.388393 3_4:-6304393 Msa0487420:CDS
ACCCAAGAGGGTGGTGGTGG+AGG 0.388393 3_4:-6304570 Msa0487420:CDS
GACTGGTAGTGGGAGTGGAT+GGG 0.391518 3_4:-6303355 Msa0487420:CDS
GGTGGAGGTGGAGGGAGAGG+CGG 0.393927 3_4:-6304732 Msa0487420:CDS
AGGGACTGGTGGTAAAAGTT+GGG 0.393947 3_4:-6303331 Msa0487420:CDS
AGGGACTGGTGGTAAAAGTT+GGG 0.393947 3_4:-6304053 Msa0487420:CDS
CCTCTGGTGGCGAGAGTGGA+TGG 0.397100 3_4:-6303730 Msa0487420:CDS
CCTCTGGTGGCGAGAGTGGA+TGG 0.397100 3_4:-6303904 Msa0487420:CDS
CCTTCCTCCACCACCCTCCT+GGG 0.398848 3_4:+6303164 None:intergenic
GGAGAGTGGTGGTGGAGGGT+GGG 0.399635 3_4:-6304214 Msa0487420:CDS
AGTGGAGGTGGTCGCGGCCG+CGG 0.400212 3_4:-6304918 Msa0487420:CDS
ACTGGTAGTGGGAGTGGATG+GGG 0.400345 3_4:-6303354 Msa0487420:CDS
GGTGGAGGAAGGGGTGGTGG+CGG 0.403150 3_4:-6304813 Msa0487420:CDS
ACCCAGGAGAGTGGTGGTGG+AGG 0.404155 3_4:-6304219 Msa0487420:CDS
AGACTGGTAGTGGGAGTGGA+TGG 0.404164 3_4:-6303356 Msa0487420:CDS
CAAGAGGGCGGTGGAGGTGG+AGG 0.408123 3_4:-6304477 Msa0487420:CDS
CAAGAGGGCGGTGGAGGTGG+AGG 0.408123 3_4:-6304654 Msa0487420:CDS
TGCACCCAAGAGGGCGGTGG+AGG 0.409832 3_4:-6304483 Msa0487420:CDS
TGCACCCAAGAGGGCGGTGG+AGG 0.409832 3_4:-6304660 Msa0487420:CDS
CAAGAAGGTGGTGGAGGTGG+AGG 0.412241 3_4:-6304300 Msa0487420:CDS
TGCACCCAAGAGGGTGGTGG+TGG 0.413051 3_4:-6304396 Msa0487420:CDS
TGCACCCAAGAGGGTGGTGG+TGG 0.413051 3_4:-6304573 Msa0487420:CDS
GGTGGAGGTGGAGGAAGGGG+TGG 0.413352 3_4:-6304468 Msa0487420:CDS
GGTGGAGGTGGAGGAAGGGG+TGG 0.413352 3_4:-6304645 Msa0487420:CDS
GGTGGACGAGGAGGCGGAAG+AGG 0.413595 3_4:-6303135 Msa0487420:CDS
ACCCAAGAGGGTGGTGGAGG+TGG 0.414259 3_4:-6304831 Msa0487420:CDS
ATTTAGAATTCAGGATGAAC+TGG 0.414435 3_4:-6302161 Msa0487420:CDS
TGCTACAAATGTGGTGAGTC+TGG 0.414956 3_4:-6304435 Msa0487420:CDS
TGCTACAAATGTGGTGAGTC+TGG 0.414956 3_4:-6304612 Msa0487420:CDS
AGGGTGGTGGAGGTGGAGGA+AGG 0.415758 3_4:-6304824 Msa0487420:CDS
GAGGGTGGTGGAGGAAGGGG+AGG 0.417277 3_4:-6303159 Msa0487420:CDS
CCCAGGAGGGTGGTGGAGGA+AGG 0.417443 3_4:-6303164 Msa0487420:CDS
TGCTTCAAGTGTGGTGAGTC+GGG 0.417671 3_4:-6303207 Msa0487420:CDS
AGGGACTGGTGGTAAAAGTT+GGG 0.418414 3_4:-6303532 Msa0487420:CDS
GGAGCTGGAAATGAAAATTC+TGG 0.419846 3_4:-6303438 Msa0487420:CDS
ACCCAAGAGGGTGGTGGAGG+TGG 0.421694 3_4:-6304744 Msa0487420:CDS
CAATACATCAAAAGGTGGTT+GGG 0.423336 3_4:-6303831 Msa0487420:CDS
CGAGGAGGTGGTAGAGGTGG+TGG 0.425434 3_4:-6303237 Msa0487420:CDS
AGTGGATGGGGAGGGACTGG+TGG 0.427986 3_4:-6303342 Msa0487420:CDS
AGTGGATGGGGAGGGACTGG+TGG 0.427986 3_4:-6304064 Msa0487420:CDS
GTGAGTCAGGTCACATGGCC+AGG 0.428407 3_4:-6304248 Msa0487420:CDS
AGAGGGTGGTGGTGGAGGGA+GGG 0.428582 3_4:-6304565 Msa0487420:CDS
AGCGACTGGTGGTAAAAGTT+GGG 0.428689 3_4:-6303705 Msa0487420:CDS
ACCCAAGAGGGCGGTGGAGG+TGG 0.428869 3_4:-6304480 Msa0487420:CDS
ACCCAAGAGGGCGGTGGAGG+TGG 0.428869 3_4:-6304657 Msa0487420:CDS
GAGCGACTGGTGGTAAAAGT+TGG 0.431107 3_4:-6303706 Msa0487420:CDS
GGAGGGGAGGTGGCGGTGGT+GGG 0.431251 3_4:-6304371 Msa0487420:CDS
GCTGCCAGCAACGGTGGAGC+TGG 0.432118 3_4:-6303453 Msa0487420:CDS
CGCGGCCGCGGTCGTGGTCG+TGG 0.432612 3_4:-6304906 Msa0487420:CDS
TGCACCCAGGAGGGTGGTGG+AGG 0.432750 3_4:-6303168 Msa0487420:CDS
GGCAGCGGTGGACGTGGAAG+AGG 0.433243 3_4:-6304189 Msa0487420:intron
TGCTACAAATGTGGTGAGTC+GGG 0.434343 3_4:-6304522 Msa0487420:CDS
TGCTACAAATGTGGTGAGTC+GGG 0.434343 3_4:-6304699 Msa0487420:CDS
ATGTGGTGAGTCCGGTCATA+TGG 0.434582 3_4:-6304337 Msa0487420:CDS
GGAGAGACTGGTAGTGGGAG+TGG 0.436982 3_4:-6303360 Msa0487420:CDS
GAGGGACTGGTGGTAAAAGT+TGG 0.437405 3_4:-6303533 Msa0487420:CDS
AGGTGGTAGAGGTGGTGGTG+GGG 0.438162 3_4:-6303232 Msa0487420:CDS
TGCACCCAGGAGAGTGGTGG+TGG 0.438928 3_4:-6304222 Msa0487420:CDS
TGCACCCAAGAGGGTGGTGG+AGG 0.439089 3_4:-6304834 Msa0487420:CDS
CAAGAGGGTGGTGGAGGTGG+AGG 0.439512 3_4:-6304828 Msa0487420:CDS
GGTGGTGGTGGACGAGGAGG+TGG 0.440584 3_4:-6303249 Msa0487420:CDS
TGCTACAAATGTGGTGAGTC+CGG 0.440913 3_4:-6304345 Msa0487420:CDS
GGTGGACGAGGAGGTGGTAG+AGG 0.440941 3_4:-6303243 Msa0487420:CDS
TGCTACAAATGTGGTGAGTC+TGG 0.442473 3_4:-6304786 Msa0487420:CDS
GTGCTTCAAGTGTGGTGAGT+CGG 0.443928 3_4:-6303208 Msa0487420:CDS
AGGTGGTGGAGGTGGAGGGA+GGG 0.445783 3_4:-6304295 Msa0487420:CDS
GGGTGGTGGAGGTGGAGGAA+GGG 0.445783 3_4:-6304823 Msa0487420:CDS
CCCAGGAGAGTGGTGGTGGA+GGG 0.445960 3_4:-6304218 Msa0487420:CDS
TGCACCCAAGAGGGTGGTGG+AGG 0.446525 3_4:-6304747 Msa0487420:CDS
GAGAGTGGATGGGGAGCGAC+TGG 0.447058 3_4:-6303719 Msa0487420:CDS
CCCACCATTGCTGGCAGTTG+TGG 0.447135 3_4:+6303631 None:intergenic
GGTGGTCGCGGCCGCGGTCG+TGG 0.447484 3_4:-6304912 Msa0487420:CDS
GAGAGTGGATGGGGAGCTAC+TGG 0.448033 3_4:-6303893 Msa0487420:CDS
CCCAAGAGGGTGGTGGTGGA+GGG 0.449577 3_4:-6304392 Msa0487420:CDS
CCCAAGAGGGTGGTGGTGGA+GGG 0.449577 3_4:-6304569 Msa0487420:CDS
GGGCGGTGGAGGTGGAGGAA+GGG 0.450570 3_4:-6304472 Msa0487420:CDS
GGGCGGTGGAGGTGGAGGAA+GGG 0.450570 3_4:-6304649 Msa0487420:CDS
TAACTGATGGTGGTAGTGGA+TGG 0.450754 3_4:-6304078 Msa0487420:CDS
TGCCACAAATGTGGTGAGTC+GGG 0.450923 3_4:-6304873 Msa0487420:CDS
AAGGTGGTGGAGGTGGAGGG+AGG 0.452284 3_4:-6304296 Msa0487420:CDS
GGAGTAACTGATGGTGGTAG+TGG 0.453091 3_4:-6304082 Msa0487420:intron
CAAGAAAGCAATACATCAAA+AGG 0.454901 3_4:-6303839 Msa0487420:CDS
CTGGATGGGGTGCTGCTCCT+GGG 0.455652 3_4:-6303940 Msa0487420:CDS
GGCAGTGGCTACGGAGGTGG+TGG 0.455677 3_4:-6303264 Msa0487420:CDS
GGAGGCAGTGGCTACGGAGG+TGG 0.456283 3_4:-6303267 Msa0487420:CDS
CCAGTAATCTTGGTTGGACA+TGG 0.456424 3_4:-6302186 Msa0487420:CDS
GAGTGCACCCAGGAGGGTGG+TGG 0.457740 3_4:-6303171 Msa0487420:CDS
TACGGAGGTGGTGGTGGACG+AGG 0.458092 3_4:-6303255 Msa0487420:CDS
AGTGGCTACGGAGGTGGTGG+TGG 0.458529 3_4:-6303261 Msa0487420:CDS
GACCCGACTCACCACATTTG+TGG 0.459364 3_4:+6304871 None:intergenic
ATTTCCGGACCCACCATTGC+TGG 0.459789 3_4:+6303622 None:intergenic
AGGGGAGGTGGTGGACGAGG+AGG 0.463825 3_4:-6303144 Msa0487420:CDS
AAATGGGGAGAGACTGGTAG+TGG 0.465346 3_4:-6303366 Msa0487420:CDS
TGCTACAAATGTGGTGAGTC+AGG 0.467452 3_4:-6304261 Msa0487420:CDS
AGGGCGGTGGAGGTGGAGGA+AGG 0.469514 3_4:-6304473 Msa0487420:CDS
AGGGCGGTGGAGGTGGAGGA+AGG 0.469514 3_4:-6304650 Msa0487420:CDS
GTGAGTCGGGTCACATGGCT+AGG 0.471912 3_4:-6303194 Msa0487420:CDS
GTGAGTCGGGTCACATGGCT+AGG 0.471912 3_4:-6304509 Msa0487420:CDS
GTGAGTCGGGTCACATGGCT+AGG 0.471912 3_4:-6304686 Msa0487420:CDS
GTGAGTCGGGTCACATGGCT+AGG 0.471912 3_4:-6304860 Msa0487420:CDS
GCTGCTGATAATAGTGGATC+TGG 0.473938 3_4:-6303974 Msa0487420:CDS
GAGGTGGTAGAGGTGGTGGT+GGG 0.473956 3_4:-6303233 Msa0487420:CDS
GGTGCTGCTCCTGGGAAGAA+TGG 0.477146 3_4:-6303932 Msa0487420:CDS
AACTGATGGTGGTAGTGGAT+GGG 0.480708 3_4:-6304077 Msa0487420:CDS
GAGTGCACCCAAGAGGGCGG+TGG 0.480749 3_4:-6304486 Msa0487420:CDS
GAGTGCACCCAAGAGGGCGG+TGG 0.480749 3_4:-6304663 Msa0487420:CDS
GCGAGTAAATGGGGAGAGAC+TGG 0.480961 3_4:-6303372 Msa0487420:CDS
AGGGAGTGCACCCAGGAGGG+TGG 0.483523 3_4:-6303174 Msa0487420:CDS
ACTGATGGTGGTAGTGGATG+GGG 0.486445 3_4:-6304076 Msa0487420:CDS
CCAGGAGGGTGGTGGAGGAA+GGG 0.486960 3_4:-6303163 Msa0487420:CDS
GAGTGCACCCAAGAGGGTGG+TGG 0.488332 3_4:-6304837 Msa0487420:CDS
GCAATACAACTGAAGCTGGT+TGG 0.489541 3_4:-6303658 Msa0487420:CDS
GAAAGCAATATAACAGAAAG+TGG 0.492707 3_4:-6303288 Msa0487420:CDS
AGAGGGTGGTGGTGGAGGGA+GGG 0.493550 3_4:-6304388 Msa0487420:CDS
GGGACTGGTGGTAAAAGTTG+GGG 0.493682 3_4:-6303330 Msa0487420:CDS
GGGACTGGTGGTAAAAGTTG+GGG 0.493682 3_4:-6304052 Msa0487420:CDS
GGGAAGAATGGAACTCCCTC+TGG 0.494060 3_4:-6303920 Msa0487420:CDS
GCAATACATCAAAAGGTGGT+TGG 0.494196 3_4:-6303832 Msa0487420:CDS
ACTCCCTCTGGTGGCGAGAG+TGG 0.497770 3_4:-6303734 Msa0487420:CDS
CAGTTGCCAGTAATCTTGGT+TGG 0.501799 3_4:-6302192 Msa0487420:CDS
TCTGGTGGCGAGAGTGGATG+GGG 0.501865 3_4:-6303728 Msa0487420:CDS
TCTGGTGGCGAGAGTGGATG+GGG 0.501865 3_4:-6303902 Msa0487420:CDS
AATGACAGTGGAGGTGGTCG+CGG 0.502728 3_4:-6304924 Msa0487420:CDS
ACTCCCTCTGGTGGCGAGAG+TGG 0.503804 3_4:-6303908 Msa0487420:CDS
GGTAGTGGGAGTGGATGGGG+AGG 0.505056 3_4:-6303351 Msa0487420:CDS
GAATGCACCCAAGAGGGTGG+TGG 0.509223 3_4:-6304750 Msa0487420:CDS
GGGACTGGTGGTAAAAGTTG+GGG 0.510446 3_4:-6303531 Msa0487420:CDS
GAAAGCAATACAACTGAAGC+TGG 0.511463 3_4:-6303662 Msa0487420:CDS
ATGCTACAAATGTGGTGAGT+CGG 0.513248 3_4:-6304523 Msa0487420:CDS
ATGCTACAAATGTGGTGAGT+CGG 0.513248 3_4:-6304700 Msa0487420:CDS
GGACGAGGAGGCGGAAGAGG+TGG 0.513583 3_4:-6303132 Msa0487420:CDS
ACCCAAGAAGGTGGTGGAGG+TGG 0.513816 3_4:-6304303 Msa0487420:CDS
GTGAGTCCGGTCATATGGCT+AGG 0.515473 3_4:-6304332 Msa0487420:CDS
TGCATCATTATTGGCAGCTG+TGG 0.515919 3_4:+6303805 None:intergenic
GTCGCAGCTGCTGATAATAG+TGG 0.516382 3_4:-6303980 Msa0487420:CDS
GAGGAGGCGGAAGAGGTGGT+GGG 0.519389 3_4:-6303128 Msa0487420:CDS
GAAAGTGGAGGCAGTGGCTA+CGG 0.522195 3_4:-6303273 Msa0487420:CDS
GCTGGATGGAGTGCTTCTCA+TGG 0.527188 3_4:-6303767 Msa0487420:CDS
AAGAAGGTGGTGGAGGTGGA+GGG 0.530382 3_4:-6304299 Msa0487420:CDS
AAGAGGGTGGTGGAGGTGGA+GGG 0.530382 3_4:-6304740 Msa0487420:CDS
TCAGGATGAACTGGTTCTCA+TGG 0.533250 3_4:-6302152 None:intergenic
CGGTCGTGGTCGTGGTGGTG+GGG 0.541302 3_4:-6304898 Msa0487420:CDS
AATACAACTGAAGCTGGTTG+GGG 0.541597 3_4:-6303656 Msa0487420:CDS
GTCACAGCTGCCAGCAACGG+TGG 0.543660 3_4:-6303459 Msa0487420:CDS
ATGCCACAAATGTGGTGAGT+CGG 0.544579 3_4:-6304874 Msa0487420:CDS
AATACATCAAAAGGTGGTTG+GGG 0.544982 3_4:-6303830 Msa0487420:CDS
GAATGCACCCAAGAGGGTGG+TGG 0.545728 3_4:-6304399 Msa0487420:CDS
GAATGCACCCAAGAGGGTGG+TGG 0.545728 3_4:-6304576 Msa0487420:CDS
GGTGGATGGGGAGTAACTGA+TGG 0.546397 3_4:-6304091 Msa0487420:intron
GGACGAGGAGGTGGTAGAGG+TGG 0.546661 3_4:-6303240 Msa0487420:CDS
GAGGGAGTTCCATTCTTCCC+AGG 0.548706 3_4:+6303923 None:intergenic
TGCACCCAAGAAGGTGGTGG+AGG 0.549904 3_4:-6304306 Msa0487420:CDS
GTGAGTCTGGTCACATGGCT+AGG 0.550474 3_4:-6304422 Msa0487420:CDS
GTGAGTCTGGTCACATGGCT+AGG 0.550474 3_4:-6304599 Msa0487420:CDS
GTGAGTCTGGTCACATGGCT+AGG 0.550474 3_4:-6304773 Msa0487420:CDS
TGGAAATGAAAATTCTGGAT+GGG 0.550691 3_4:-6303433 Msa0487420:CDS
GATTACAATGACAGTGGAGG+TGG 0.550847 3_4:-6304930 Msa0487420:CDS
CATGGCCAGGGAGTGCACCC+AGG 0.552753 3_4:-6304235 Msa0487420:CDS
ATGTGGTGAGTCGGGTCACA+TGG 0.553061 3_4:-6304514 Msa0487420:CDS
ATGTGGTGAGTCGGGTCACA+TGG 0.553061 3_4:-6304691 Msa0487420:CDS
ATGTGGTGAGTCGGGTCACA+TGG 0.553061 3_4:-6304865 Msa0487420:CDS
GTGTGGTGAGTCGGGTCACA+TGG 0.554881 3_4:-6303199 Msa0487420:CDS
GCTAGGGAATGCACCCAAGA+AGG 0.556730 3_4:-6304315 Msa0487420:CDS
CTGGAAATGAAAATTCTGGA+TGG 0.558998 3_4:-6303955 Msa0487420:CDS
GCTAGGGAGTGCACCCAGGA+GGG 0.559663 3_4:-6303177 Msa0487420:CDS
AGGGAGTGCACCCAGGAGAG+TGG 0.559924 3_4:-6304228 Msa0487420:CDS
ATAACAGAAAGTGGAGGCAG+TGG 0.561445 3_4:-6303279 Msa0487420:CDS
CTGGAAATGAAAATTCTGGA+TGG 0.561663 3_4:-6303434 Msa0487420:CDS
CCATCCACTCTCGCCACCAG+AGG 0.568519 3_4:+6303730 None:intergenic
CCATCCACTCTCGCCACCAG+AGG 0.568519 3_4:+6303904 None:intergenic
ATGTGGTGAGTCAGGTCACA+TGG 0.570843 3_4:-6304253 Msa0487420:CDS
TGGAAATGAAAATTCTGGAT+GGG 0.571890 3_4:-6303954 Msa0487420:CDS
TGAGTCTGGTCACATGGCTA+GGG 0.573329 3_4:-6304421 Msa0487420:CDS
TGAGTCTGGTCACATGGCTA+GGG 0.573329 3_4:-6304598 Msa0487420:CDS
TGAGTCTGGTCACATGGCTA+GGG 0.573329 3_4:-6304772 Msa0487420:CDS
CTGGATGGAGTGCTTCTCAT+GGG 0.573833 3_4:-6303766 Msa0487420:CDS
AGGGAGTGCACCCAAGAGGG+TGG 0.574509 3_4:-6304840 Msa0487420:CDS
GGGAAGAATGAAACTCCCTC+TGG 0.575224 3_4:-6303746 Msa0487420:CDS
GGAAATGAAAATTCTGGATG+GGG 0.575924 3_4:-6303432 Msa0487420:CDS
AGTGGATGGGGAGGGACTGG+TGG 0.578164 3_4:-6303543 Msa0487420:intron
AATGGGGAGAGACTGGTAGT+GGG 0.579243 3_4:-6303365 Msa0487420:CDS
GAATGCACCCAAGAAGGTGG+TGG 0.582297 3_4:-6304309 Msa0487420:CDS
GGAGTCACAGCTGCCAGCAA+CGG 0.582358 3_4:-6303462 Msa0487420:CDS
GGAGGTGGTGGTGGACGAGG+AGG 0.583344 3_4:-6303252 Msa0487420:CDS
TACAAACCAAGAAAGCAATA+CGG 0.586376 3_4:-6303499 Msa0487420:CDS
CATCCACTCTCGCCACCAGA+GGG 0.587096 3_4:+6303731 None:intergenic
CATCCACTCTCGCCACCAGA+GGG 0.587096 3_4:+6303905 None:intergenic
GGCCGCGGTCGTGGTCGTGG+TGG 0.592231 3_4:-6304903 Msa0487420:CDS
CACCACCACGACCACGACCG+CGG 0.593732 3_4:+6304901 None:intergenic
GGAGCCACAACTGCCAGCAA+TGG 0.593774 3_4:-6303635 Msa0487420:intron
CATGGCTAGGGAGTGCACCC+AGG 0.595292 3_4:-6303181 Msa0487420:CDS
GCATTCCCTAGCCATATGAC+CGG 0.596586 3_4:+6304326 None:intergenic
GCTAGGGAGTGCACCCAAGA+GGG 0.598136 3_4:-6304492 Msa0487420:CDS
GCTAGGGAGTGCACCCAAGA+GGG 0.598136 3_4:-6304669 Msa0487420:CDS
ACTGGTGGTAAAAGTTGGGG+TGG 0.598430 3_4:-6303327 Msa0487420:CDS
TGAGTCAGGTCACATGGCCA+GGG 0.598844 3_4:-6304247 Msa0487420:CDS
GGATGGGGAGTAACTGATGG+TGG 0.599411 3_4:-6304088 Msa0487420:intron
AGGGAGTGCACCCAAGAGGG+CGG 0.599753 3_4:-6304489 Msa0487420:CDS
AGGGAGTGCACCCAAGAGGG+CGG 0.599753 3_4:-6304666 Msa0487420:CDS
GCTAGGGAATGCACCCAAGA+GGG 0.600117 3_4:-6304405 Msa0487420:CDS
GCTAGGGAATGCACCCAAGA+GGG 0.600117 3_4:-6304582 Msa0487420:CDS
GCTAGGGAATGCACCCAAGA+GGG 0.600117 3_4:-6304756 Msa0487420:CDS
TGAGTCGGGTCACATGGCTA+GGG 0.601697 3_4:-6303193 Msa0487420:CDS
TGAGTCGGGTCACATGGCTA+GGG 0.601697 3_4:-6304508 Msa0487420:CDS
TGAGTCGGGTCACATGGCTA+GGG 0.601697 3_4:-6304685 Msa0487420:CDS
TGAGTCGGGTCACATGGCTA+GGG 0.601697 3_4:-6304859 Msa0487420:CDS
TACATCAAAAGGTGGTTGGG+GGG 0.605720 3_4:-6303828 Msa0487420:CDS
GGTGGGGCGTGCTTCAAGTG+TGG 0.608021 3_4:-6303216 Msa0487420:CDS
AGGAGGCGGAAGAGGTGGTG+GGG 0.610117 3_4:-6303127 Msa0487420:CDS
ACTGGTGGTAAAAGTTGGGG+TGG 0.611061 3_4:-6304049 Msa0487420:CDS
GGTGGGGCATGCCACAAATG+TGG 0.611968 3_4:-6304882 Msa0487420:CDS
GGTGGGGCGTGCTACAAGTG+TGG 0.612759 3_4:-6303111 Msa0487420:intron
TGAGTCCGGTCATATGGCTA+GGG 0.612897 3_4:-6304331 Msa0487420:CDS
AGGGAATGCACCCAAGAGGG+TGG 0.618422 3_4:-6304402 Msa0487420:CDS
AGGGAATGCACCCAAGAGGG+TGG 0.618422 3_4:-6304579 Msa0487420:CDS
AGGGAATGCACCCAAGAGGG+TGG 0.618422 3_4:-6304753 Msa0487420:CDS
GGCTAGGGAGTGCACCCAGG+AGG 0.618939 3_4:-6303178 Msa0487420:CDS
GCTAGGGAGTGCACCCAAGA+GGG 0.620907 3_4:-6304843 Msa0487420:CDS
GAGTGCACCCAGGAGAGTGG+TGG 0.621168 3_4:-6304225 Msa0487420:CDS
GGAAATGAAAATTCTGGATG+GGG 0.623863 3_4:-6303953 Msa0487420:CDS
ATACATCAAAAGGTGGTTGG+GGG 0.624775 3_4:-6303829 Msa0487420:CDS
ATGTGGTGAGTCTGGTCACA+TGG 0.627541 3_4:-6304427 Msa0487420:CDS
ATGTGGTGAGTCTGGTCACA+TGG 0.627541 3_4:-6304604 Msa0487420:CDS
ATGTGGTGAGTCTGGTCACA+TGG 0.627541 3_4:-6304778 Msa0487420:CDS
ACTGGTGGTAAAAGTTGGGG+TGG 0.629796 3_4:-6303875 Msa0487420:CDS
AAGAATGAAACTCCCTCTGG+TGG 0.630344 3_4:-6303743 Msa0487420:CDS
AAGAATGGAACTCCCTCTGG+TGG 0.630344 3_4:-6303917 Msa0487420:CDS
GGCTAGGGAGTGCACCCAAG+AGG 0.630370 3_4:-6304493 Msa0487420:CDS
GGCTAGGGAGTGCACCCAAG+AGG 0.630370 3_4:-6304670 Msa0487420:CDS
GTAGTGGGAGTGGATGGGGA+GGG 0.630371 3_4:-6303350 Msa0487420:CDS
AGTGGAGGCAGTGGCTACGG+AGG 0.630984 3_4:-6303270 Msa0487420:CDS
AGTGGATGGGGAGCGACTGG+TGG 0.633134 3_4:-6303716 Msa0487420:CDS
GAAAGCAATACATCAAAAGG+TGG 0.636891 3_4:-6303836 Msa0487420:CDS
ACTGGTGGTAAAAGTTGGGG+TGG 0.644058 3_4:-6303701 Msa0487420:CDS
GCGACTGGTGGTAAAAGTTG+GGG 0.646093 3_4:-6303704 Msa0487420:CDS
AGGGAATGCACCCAAGAAGG+TGG 0.646439 3_4:-6304312 Msa0487420:CDS
GCTACTGGTGGTAAAAGTTG+GGG 0.646666 3_4:-6303878 Msa0487420:CDS
GGCTAGGGAATGCACCCAAG+AGG 0.648734 3_4:-6304406 Msa0487420:CDS
GGCTAGGGAATGCACCCAAG+AGG 0.648734 3_4:-6304583 Msa0487420:CDS
GGCTAGGGAATGCACCCAAG+AGG 0.648734 3_4:-6304757 Msa0487420:CDS
GGCTAGGGAGTGCACCCAAG+AGG 0.648734 3_4:-6304844 Msa0487420:CDS
TCAGATTACAATGACAGTGG+AGG 0.652180 3_4:-6304933 None:intergenic
ATGGTGGTAGTGGATGGGGA+GGG 0.659703 3_4:-6304072 Msa0487420:CDS
TCTGGTGGTGCGAGTAAATG+GGG 0.666630 3_4:-6303381 Msa0487420:CDS
GATGGTGGTAGTGGATGGGG+AGG 0.669727 3_4:-6304073 Msa0487420:CDS
AGCAATATAACAGAAAGTGG+AGG 0.671066 3_4:-6303285 Msa0487420:CDS
AGTGGATGGGGAGCTACTGG+TGG 0.672760 3_4:-6303890 Msa0487420:CDS
ACTGGTGGTAAAAGTTGGGG+CGG 0.680063 3_4:-6303528 Msa0487420:CDS
GGTGGATCTTGCTACAAATG+TGG 0.681383 3_4:-6304444 Msa0487420:CDS
GGTGGATCTTGCTACAAATG+TGG 0.681383 3_4:-6304621 Msa0487420:CDS
AGCGGTGCGTGCTACAAATG+TGG 0.691215 3_4:-6304270 Msa0487420:CDS
CTTTCAGATTACAATGACAG+TGG 0.691843 3_4:-6304936 None:intergenic
GGCGGATCATGCTACAAATG+TGG 0.703648 3_4:-6304795 Msa0487420:CDS
GGCGGCACATGCTACAAATG+TGG 0.708371 3_4:-6304708 Msa0487420:CDS
GGTGGGACATGCTACAAATG+TGG 0.724678 3_4:-6304354 Msa0487420:CDS
GGTGGCACATGCTACAAATG+TGG 0.724678 3_4:-6304531 Msa0487420:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATATTTTAATTTAA+AGG - chr3_4:6304616-6304635 Msa0487420:CDS 0.0%
!!! TTTGTTTTTTAATTAATAAC+AGG - chr3_4:6304706-6304725 Msa0487420:CDS 10.0%
!!! TTTTTTAATTAATAACAGGT+TGG - chr3_4:6304710-6304729 Msa0487420:CDS 15.0%
!!! TTTTTAATTAATAACAGGTT+GGG - chr3_4:6304711-6304730 Msa0487420:CDS 15.0%
!! ATGAAAATAAATATATCAGA+AGG - chr3_4:6304853-6304872 Msa0487420:CDS 15.0%
! TAAACAAGCATATAAGTAGT+AGG + chr3_4:6304578-6304597 None:intergenic 25.0%
!!! TGGGATTTGAAATTCTATTT+TGG - chr3_4:6304763-6304782 Msa0487420:CDS 25.0%
! AATATATCAGAAGGAAGTTT+CGG - chr3_4:6304862-6304881 Msa0487420:CDS 25.0%
GAAAGCAATACAGAAAAAAG+TGG - chr3_4:6303070-6303089 Msa0487420:intron 30.0%
CAATACAGAAAAAAGTGGTT+GGG - chr3_4:6303075-6303094 Msa0487420:intron 30.0%
AATACAGAAAAAAGTGGTTG+GGG - chr3_4:6303076-6303095 Msa0487420:intron 30.0%
TGGAAATGAAAATTCTGGAT+GGG - chr3_4:6303126-6303145 Msa0487420:CDS 30.0%
! CTTTTGATGTATTGCTTTCT+TGG + chr3_4:6303243-6303262 None:intergenic 30.0%
CAAGAAAGCAATACATCAAA+AGG - chr3_4:6303241-6303260 Msa0487420:CDS 30.0%
!!! ATTTTCAGGTGCATCATTAT+TGG + chr3_4:6303287-6303306 None:intergenic 30.0%
TACAAACCAAGAAAGCAATA+CGG - chr3_4:6303581-6303600 Msa0487420:intron 30.0%
TGGAAATGAAAATTCTGGAT+GGG - chr3_4:6303126-6303145 Msa0487420:CDS 30.0%
GAAAGCAATATAACAGAAAG+TGG - chr3_4:6303792-6303811 Msa0487420:CDS 30.0%
! TATGCTTGTTTATCTTTTGC+AGG - chr3_4:6304586-6304605 Msa0487420:CDS 30.0%
!! TCTGTTTTGCAATAGCTTTA+AGG - chr3_4:6304640-6304659 Msa0487420:CDS 30.0%
AAGAGTAAGAACAGATAATG+AGG + chr3_4:6304680-6304699 None:intergenic 30.0%
!!! TTTTTTAATGCGTCGTGATA+TGG - chr3_4:6304740-6304759 Msa0487420:CDS 30.0%
ATATATCAGAAGGAAGTTTC+GGG - chr3_4:6304863-6304882 Msa0487420:CDS 30.0%
! GACATGGAAATTTAGAATTC+AGG - chr3_4:6304910-6304929 Msa0487420:CDS 30.0%
! ATTTAGAATTCAGGATGAAC+TGG - chr3_4:6304919-6304938 Msa0487420:CDS 30.0%
GCAATACAGAAAAAAGTGGT+TGG - chr3_4:6303074-6303093 Msa0487420:intron 35.0%
GGATCTGGAAATGAAAATTC+TGG - chr3_4:6303121-6303140 Msa0487420:CDS 35.0%
CTGGAAATGAAAATTCTGGA+TGG - chr3_4:6303125-6303144 Msa0487420:CDS 35.0%
GGAAATGAAAATTCTGGATG+GGG - chr3_4:6303127-6303146 Msa0487420:CDS 35.0%
GAAAGCAATACATCAAAAGG+TGG - chr3_4:6303244-6303263 Msa0487420:CDS 35.0%
CAATACATCAAAAGGTGGTT+GGG - chr3_4:6303249-6303268 Msa0487420:CDS 35.0%
AATACATCAAAAGGTGGTTG+GGG - chr3_4:6303250-6303269 Msa0487420:CDS 35.0%
!!! CATCCAGCTTTTTCATTTTC+AGG + chr3_4:6303301-6303320 None:intergenic 35.0%
CTGAAAATGAAAAAGCTGGA+TGG - chr3_4:6303299-6303318 Msa0487420:CDS 35.0%
! CCATCCAGAATTTTCATTTC+CGG + chr3_4:6303128-6303147 None:intergenic 35.0%
CGGAAATGAAAATTCTGGAT+GGG - chr3_4:6303474-6303493 Msa0487420:CDS 35.0%
! CTTTTTCCGTATTGCTTTCT+TGG + chr3_4:6303590-6303609 None:intergenic 35.0%
CAAGAAAGCAATACGGAAAA+AGG - chr3_4:6303588-6303607 Msa0487420:intron 35.0%
CTGGAAATGAAAATTCTGGA+TGG - chr3_4:6303125-6303144 Msa0487420:CDS 35.0%
GGAAATGAAAATTCTGGATG+GGG - chr3_4:6303127-6303146 Msa0487420:CDS 35.0%
AGCAATATAACAGAAAGTGG+AGG - chr3_4:6303795-6303814 Msa0487420:CDS 35.0%
TGCTATAAATGTGGTGAATC+AGG - chr3_4:6304185-6304204 Msa0487420:intron 35.0%
GTGGAAACTGTTACAAATGT+GGG - chr3_4:6304498-6304517 Msa0487420:CDS 35.0%
TGGAAACTGTTACAAATGTG+GGG - chr3_4:6304499-6304518 Msa0487420:CDS 35.0%
!!! GTTTTGCAATAGCTTTAAGG+AGG - chr3_4:6304643-6304662 Msa0487420:CDS 35.0%
ATGCTACAAATGTGGTGAGT+CGG - chr3_4:6302293-6302312 Msa0487420:intron 40.0%
ATGCTACAAATGTGGTGAGT+CGG - chr3_4:6302293-6302312 Msa0487420:intron 40.0%
GATAACGTTGATGTCAACGA+TGG - chr3_4:6302960-6302979 Msa0487420:intron 40.0%
AGCTACTGGTGGTAAAAGTT+GGG - chr3_4:6303201-6303220 Msa0487420:CDS 40.0%
GCAATACATCAAAAGGTGGT+TGG - chr3_4:6303248-6303267 Msa0487420:CDS 40.0%
ATACATCAAAAGGTGGTTGG+GGG - chr3_4:6303251-6303270 Msa0487420:CDS 40.0%
GCACCTGAAAATGAAAAAGC+TGG - chr3_4:6303295-6303314 Msa0487420:CDS 40.0%
GAAAGCAATACAACTGAAGC+TGG - chr3_4:6303418-6303437 Msa0487420:CDS 40.0%
CAATACAACTGAAGCTGGTT+GGG - chr3_4:6303423-6303442 Msa0487420:CDS 40.0%
AATACAACTGAAGCTGGTTG+GGG - chr3_4:6303424-6303443 Msa0487420:CDS 40.0%
CCGGAAATGAAAATTCTGGA+TGG - chr3_4:6303473-6303492 Msa0487420:CDS 40.0%
AAGAATGTAACTCCTTCTGG+TGG - chr3_4:6303510-6303529 Msa0487420:CDS 40.0%
GAAAGCAATACGGAAAAAGG+TGG - chr3_4:6303591-6303610 Msa0487420:intron 40.0%
CAATACGGAAAAAGGTGGTT+GGG - chr3_4:6303596-6303615 Msa0487420:intron 40.0%
AATACGGAAAAAGGTGGTTG+GGG - chr3_4:6303597-6303616 Msa0487420:intron 40.0%
GGAGCTGGAAATGAAAATTC+TGG - chr3_4:6303642-6303661 Msa0487420:CDS 40.0%
AAAAATGCAACTGCTTCTGG+TGG - chr3_4:6303684-6303703 Msa0487420:CDS 40.0%
GGTGGAAACTGTTACAAATG+TGG - chr3_4:6304497-6304516 Msa0487420:CDS 40.0%
TTTAATGCGTCGTGATATGG+TGG - chr3_4:6304743-6304762 Msa0487420:CDS 40.0%
TTAATGCGTCGTGATATGGT+GGG - chr3_4:6304744-6304763 Msa0487420:CDS 40.0%
!! CAGAGCAGATTTTGTTTGAG+AGG + chr3_4:6304791-6304810 None:intergenic 40.0%
ACACGTTTCACCATAGAACA+GGG + chr3_4:6304818-6304837 None:intergenic 40.0%
ATGCCACAAATGTGGTGAGT+CGG - chr3_4:6302206-6302225 Msa0487420:CDS 45.0%
TGCTACAAATGTGGTGAGTC+TGG - chr3_4:6302294-6302313 Msa0487420:intron 45.0%
TGCTACAAATGTGGTGAGTC+GGG - chr3_4:6302294-6302313 Msa0487420:intron 45.0%
GGTGGATCTTGCTACAAATG+TGG - chr3_4:6302459-6302478 Msa0487420:intron 45.0%
TGCTACAAATGTGGTGAGTC+TGG - chr3_4:6302294-6302313 Msa0487420:intron 45.0%
TGCTACAAATGTGGTGAGTC+GGG - chr3_4:6302294-6302313 Msa0487420:intron 45.0%
GGTGGATCTTGCTACAAATG+TGG - chr3_4:6302459-6302478 Msa0487420:intron 45.0%
TGCTACAAATGTGGTGAGTC+TGG - chr3_4:6302294-6302313 Msa0487420:intron 45.0%
TGCTACAAATGTGGTGAGTC+CGG - chr3_4:6302294-6302313 Msa0487420:intron 45.0%
TGCTACAAATGTGGTGAGTC+AGG - chr3_4:6302294-6302313 Msa0487420:intron 45.0%
TATGACTAGATCCACGTCCA+CGG + chr3_4:6302923-6302942 None:intergenic 45.0%
AACGTTGATGTCAACGATGG+TGG - chr3_4:6302963-6302982 Msa0487420:intron 45.0%
! TTGATGTCAACGATGGTGGT+GGG - chr3_4:6302967-6302986 Msa0487420:intron 45.0%
!! TAACTGATGGTGGTAGTGGA+TGG - chr3_4:6303002-6303021 Msa0487420:intron 45.0%
!! AACTGATGGTGGTAGTGGAT+GGG - chr3_4:6303003-6303022 Msa0487420:intron 45.0%
! AGGGACTGGTGGTAAAAGTT+GGG - chr3_4:6303027-6303046 Msa0487420:intron 45.0%
!! GCTGCTGATAATAGTGGATC+TGG - chr3_4:6303106-6303125 Msa0487420:intron 45.0%
GAGCTACTGGTGGTAAAAGT+TGG - chr3_4:6303200-6303219 Msa0487420:CDS 45.0%
GCTACTGGTGGTAAAAGTTG+GGG - chr3_4:6303202-6303221 Msa0487420:CDS 45.0%
TACATCAAAAGGTGGTTGGG+GGG - chr3_4:6303252-6303271 Msa0487420:CDS 45.0%
TGCATCATTATTGGCAGCTG+TGG + chr3_4:6303278-6303297 None:intergenic 45.0%
AAGAATGAAACTCCCTCTGG+TGG - chr3_4:6303337-6303356 Msa0487420:CDS 45.0%
AGCGACTGGTGGTAAAAGTT+GGG - chr3_4:6303375-6303394 Msa0487420:CDS 45.0%
GCAATACAACTGAAGCTGGT+TGG - chr3_4:6303422-6303441 Msa0487420:CDS 45.0%
GGGTCCGGAAATGAAAATTC+TGG - chr3_4:6303469-6303488 Msa0487420:CDS 45.0%
GAAGGAGTTACATTCTTCCC+AGG + chr3_4:6303507-6303526 None:intergenic 45.0%
GGGAAGAATGTAACTCCTTC+TGG - chr3_4:6303507-6303526 Msa0487420:CDS 45.0%
! AGGGACTGGTGGTAAAAGTT+GGG - chr3_4:6303027-6303046 Msa0487420:intron 45.0%
GCAATACGGAAAAAGGTGGT+TGG - chr3_4:6303595-6303614 Msa0487420:intron 45.0%
GCGAAAAATGCAACTGCTTC+TGG - chr3_4:6303681-6303700 Msa0487420:CDS 45.0%
! TTCTGGTGGTGCGAGTAAAT+GGG - chr3_4:6303698-6303717 Msa0487420:CDS 45.0%
! AGGGACTGGTGGTAAAAGTT+GGG - chr3_4:6303027-6303046 Msa0487420:intron 45.0%
ATAACAGAAAGTGGAGGCAG+TGG - chr3_4:6303801-6303820 Msa0487420:CDS 45.0%
TGCTACAAGTGTGGTGAATC+TGG - chr3_4:6304074-6304093 Msa0487420:CDS 45.0%
TGAATCTGGTCACATGGCTA+GGG - chr3_4:6304088-6304107 Msa0487420:intron 45.0%
GGTGGGTCATGCTATAAATG+TGG - chr3_4:6304176-6304195 Msa0487420:intron 45.0%
ATGTGGTGAATCAGGTCACA+TGG - chr3_4:6304193-6304212 Msa0487420:CDS 45.0%
TGAATCAGGTCACATGGCTA+GGG - chr3_4:6304199-6304218 Msa0487420:CDS 45.0%
GATTCACCACACTTGTAGCA+CGG + chr3_4:6304074-6304093 None:intergenic 45.0%
TGCTACAAGTGTGGTGAATC+AGG - chr3_4:6304074-6304093 Msa0487420:CDS 45.0%
TGAATCAGGTCACATGGCTA+GGG - chr3_4:6304199-6304218 Msa0487420:CDS 45.0%
TGTTACAAATGTGGGGAGTC+CGG - chr3_4:6304506-6304525 Msa0487420:CDS 45.0%
!! AGCTTTAAGGAGGTGTCTGT+TGG - chr3_4:6304653-6304672 Msa0487420:CDS 45.0%
GACACGTTTCACCATAGAAC+AGG + chr3_4:6304819-6304838 None:intergenic 45.0%
CAGTTGCCAGTAATCTTGGT+TGG - chr3_4:6304888-6304907 Msa0487420:CDS 45.0%
CCATGTCCAACCAAGATTAC+TGG + chr3_4:6304897-6304916 None:intergenic 45.0%
CCAGTAATCTTGGTTGGACA+TGG - chr3_4:6304894-6304913 Msa0487420:CDS 45.0%
TGCCACAAATGTGGTGAGTC+GGG - chr3_4:6302207-6302226 Msa0487420:CDS 50.0%
GGCGGATCATGCTACAAATG+TGG - chr3_4:6302285-6302304 Msa0487420:intron 50.0%
ATGTGGTGAGTCTGGTCACA+TGG - chr3_4:6302302-6302321 Msa0487420:intron 50.0%
TGAGTCTGGTCACATGGCTA+GGG - chr3_4:6302308-6302327 Msa0487420:intron 50.0%
ATGTGGTGAGTCTGGTCACA+TGG - chr3_4:6302302-6302321 Msa0487420:intron 50.0%
TGAGTCTGGTCACATGGCTA+GGG - chr3_4:6302308-6302327 Msa0487420:intron 50.0%
GGTGGCACATGCTACAAATG+TGG - chr3_4:6302549-6302568 Msa0487420:intron 50.0%
ATGTGGTGAGTCTGGTCACA+TGG - chr3_4:6302302-6302321 Msa0487420:intron 50.0%
TGAGTCTGGTCACATGGCTA+GGG - chr3_4:6302308-6302327 Msa0487420:intron 50.0%
GGTGGGACATGCTACAAATG+TGG - chr3_4:6302726-6302745 Msa0487420:intron 50.0%
ATGTGGTGAGTCCGGTCATA+TGG - chr3_4:6302743-6302762 Msa0487420:intron 50.0%
TGAGTCCGGTCATATGGCTA+GGG - chr3_4:6302749-6302768 Msa0487420:intron 50.0%
GCATTCCCTAGCCATATGAC+CGG + chr3_4:6302757-6302776 None:intergenic 50.0%
ATGTGGTGAGTCAGGTCACA+TGG - chr3_4:6302827-6302846 Msa0487420:intron 50.0%
! GTTGATGTCAACGATGGTGG+TGG - chr3_4:6302966-6302985 Msa0487420:intron 50.0%
! TGATGTCAACGATGGTGGTG+GGG - chr3_4:6302968-6302987 Msa0487420:intron 50.0%
!! GGAGTAACTGATGGTGGTAG+TGG - chr3_4:6302998-6303017 Msa0487420:intron 50.0%
!! ACTGATGGTGGTAGTGGATG+GGG - chr3_4:6303004-6303023 Msa0487420:intron 50.0%
! GAGGGACTGGTGGTAAAAGT+TGG - chr3_4:6303026-6303045 Msa0487420:intron 50.0%
! GGGACTGGTGGTAAAAGTTG+GGG - chr3_4:6303028-6303047 Msa0487420:intron 50.0%
ACTGGTGGTAAAAGTTGGGG+TGG - chr3_4:6303031-6303050 Msa0487420:intron 50.0%
GTCGCAGCTGCTGATAATAG+TGG - chr3_4:6303100-6303119 Msa0487420:intron 50.0%
AAGAATGGAACTCCCTCTGG+TGG - chr3_4:6303163-6303182 Msa0487420:CDS 50.0%
ACTGGTGGTAAAAGTTGGGG+TGG - chr3_4:6303031-6303050 Msa0487420:intron 50.0%
! CTGGATGGAGTGCTTCTCAT+GGG - chr3_4:6303314-6303333 Msa0487420:CDS 50.0%
GGGAAGAATGAAACTCCCTC+TGG - chr3_4:6303334-6303353 Msa0487420:CDS 50.0%
GAGCGACTGGTGGTAAAAGT+TGG - chr3_4:6303374-6303393 Msa0487420:CDS 50.0%
GCGACTGGTGGTAAAAGTTG+GGG - chr3_4:6303376-6303395 Msa0487420:CDS 50.0%
ACTGGTGGTAAAAGTTGGGG+TGG - chr3_4:6303031-6303050 Msa0487420:intron 50.0%
! GAGGGACTGGTGGTAAAAGT+TGG - chr3_4:6303026-6303045 Msa0487420:intron 50.0%
! GGGACTGGTGGTAAAAGTTG+GGG - chr3_4:6303028-6303047 Msa0487420:intron 50.0%
ACTGGTGGTAAAAGTTGGGG+CGG - chr3_4:6303031-6303050 Msa0487420:intron 50.0%
! CTTCTGGTGGTGCGAGTAAA+TGG - chr3_4:6303697-6303716 Msa0487420:CDS 50.0%
! TCTGGTGGTGCGAGTAAATG+GGG - chr3_4:6303699-6303718 Msa0487420:CDS 50.0%
AAATGGGGAGAGACTGGTAG+TGG - chr3_4:6303714-6303733 Msa0487420:CDS 50.0%
AATGGGGAGAGACTGGTAGT+GGG - chr3_4:6303715-6303734 Msa0487420:CDS 50.0%
! GAGGGACTGGTGGTAAAAGT+TGG - chr3_4:6303026-6303045 Msa0487420:intron 50.0%
! GGGACTGGTGGTAAAAGTTG+GGG - chr3_4:6303028-6303047 Msa0487420:intron 50.0%
ACTGGTGGTAAAAGTTGGGG+TGG - chr3_4:6303031-6303050 Msa0487420:intron 50.0%
GTGCTTCAAGTGTGGTGAGT+CGG - chr3_4:6303872-6303891 Msa0487420:CDS 50.0%
TGCTTCAAGTGTGGTGAGTC+GGG - chr3_4:6303873-6303892 Msa0487420:CDS 50.0%
GTGCTACAAGTGTGGTGAGT+CGG - chr3_4:6303977-6303996 Msa0487420:CDS 50.0%
TGCTACAAGTGTGGTGAGTC+GGG - chr3_4:6303978-6303997 Msa0487420:CDS 50.0%
GTGTGGTGAATCTGGTCACA+TGG - chr3_4:6304082-6304101 Msa0487420:intron 50.0%
GTGAATCTGGTCACATGGCT+AGG - chr3_4:6304087-6304106 Msa0487420:intron 50.0%
GTGAATCAGGTCACATGGCT+AGG - chr3_4:6304198-6304217 Msa0487420:CDS 50.0%
GTGCTACAAGTGTGGTGAGT+CGG - chr3_4:6303977-6303996 Msa0487420:CDS 50.0%
TGCTACAAGTGTGGTGAGTC+GGG - chr3_4:6303978-6303997 Msa0487420:CDS 50.0%
GTGTGGTGAATCAGGTCACA+TGG - chr3_4:6304406-6304425 Msa0487420:CDS 50.0%
GTGAATCAGGTCACATGGCT+AGG - chr3_4:6304198-6304217 Msa0487420:CDS 50.0%
GTTACAAATGTGGGGAGTCC+GGG - chr3_4:6304507-6304526 Msa0487420:CDS 50.0%
GCATTCTCTCGCAAAATGCC+CGG + chr3_4:6304528-6304547 None:intergenic 50.0%
!! AACTTCAAGCAGTGCTGGCT+GGG + chr3_4:6304550-6304569 None:intergenic 50.0%
GCTCTGACTTCCCTGTTCTA+TGG - chr3_4:6304805-6304824 Msa0487420:CDS 50.0%
GGCTCAGTTGCCAGTAATCT+TGG - chr3_4:6304884-6304903 Msa0487420:CDS 50.0%
AATGACAGTGGAGGTGGTCG+CGG - chr3_4:6302156-6302175 Msa0487420:CDS 55.0%
GACCCGACTCACCACATTTG+TGG + chr3_4:6302212-6302231 None:intergenic 55.0%
ATGTGGTGAGTCGGGTCACA+TGG - chr3_4:6302215-6302234 Msa0487420:intron 55.0%
TGAGTCGGGTCACATGGCTA+GGG - chr3_4:6302221-6302240 Msa0487420:intron 55.0%
GTGAGTCTGGTCACATGGCT+AGG - chr3_4:6302307-6302326 Msa0487420:intron 55.0%
GCTAGGGAATGCACCCAAGA+GGG - chr3_4:6302324-6302343 Msa0487420:intron 55.0%
GGCGGCACATGCTACAAATG+TGG - chr3_4:6302372-6302391 Msa0487420:intron 55.0%
ATGTGGTGAGTCGGGTCACA+TGG - chr3_4:6302215-6302234 Msa0487420:intron 55.0%
TGAGTCGGGTCACATGGCTA+GGG - chr3_4:6302221-6302240 Msa0487420:intron 55.0%
GTGAGTCTGGTCACATGGCT+AGG - chr3_4:6302307-6302326 Msa0487420:intron 55.0%
GCTAGGGAATGCACCCAAGA+GGG - chr3_4:6302324-6302343 Msa0487420:intron 55.0%
ATGTGGTGAGTCGGGTCACA+TGG - chr3_4:6302215-6302234 Msa0487420:intron 55.0%
TGAGTCGGGTCACATGGCTA+GGG - chr3_4:6302221-6302240 Msa0487420:intron 55.0%
GTGAGTCTGGTCACATGGCT+AGG - chr3_4:6302307-6302326 Msa0487420:intron 55.0%
GCTAGGGAATGCACCCAAGA+GGG - chr3_4:6302324-6302343 Msa0487420:intron 55.0%
GTGAGTCCGGTCATATGGCT+AGG - chr3_4:6302748-6302767 Msa0487420:intron 55.0%
GCTAGGGAATGCACCCAAGA+AGG - chr3_4:6302324-6302343 Msa0487420:intron 55.0%
AGGGAATGCACCCAAGAAGG+TGG - chr3_4:6302768-6302787 Msa0487420:intron 55.0%
GAATGCACCCAAGAAGGTGG+TGG - chr3_4:6302771-6302790 Msa0487420:intron 55.0%
TCCACCTCCACCACCTTCTT+GGG + chr3_4:6302781-6302800 None:intergenic 55.0%
!! AAGAAGGTGGTGGAGGTGGA+GGG - chr3_4:6302781-6302800 Msa0487420:intron 55.0%
AGCGGTGCGTGCTACAAATG+TGG - chr3_4:6302810-6302829 Msa0487420:intron 55.0%
TGAGTCAGGTCACATGGCCA+GGG - chr3_4:6302833-6302852 Msa0487420:intron 55.0%
GGTGGATGGGGAGTAACTGA+TGG - chr3_4:6302989-6303008 Msa0487420:intron 55.0%
GGATGGGGAGTAACTGATGG+TGG - chr3_4:6302992-6303011 Msa0487420:intron 55.0%
!! ATGGTGGTAGTGGATGGGGA+GGG - chr3_4:6303008-6303027 Msa0487420:intron 55.0%
GAGGGAGTTCCATTCTTCCC+AGG + chr3_4:6303160-6303179 None:intergenic 55.0%
GGGAAGAATGGAACTCCCTC+TGG - chr3_4:6303160-6303179 Msa0487420:CDS 55.0%
! GCTGGATGGAGTGCTTCTCA+TGG - chr3_4:6303313-6303332 Msa0487420:CDS 55.0%
CCACAACTGCCAGCAATGGT+GGG - chr3_4:6303449-6303468 Msa0487420:CDS 55.0%
ATTTCCGGACCCACCATTGC+TGG + chr3_4:6303461-6303480 None:intergenic 55.0%
! TTCTGGTGGCGAGAGTGGAT+GGG - chr3_4:6303524-6303543 Msa0487420:CDS 55.0%
ATTTCCAGCTCCACCGTTGC+TGG + chr3_4:6303634-6303653 None:intergenic 55.0%
GCGAGTAAATGGGGAGAGAC+TGG - chr3_4:6303708-6303727 Msa0487420:CDS 55.0%
!! AGACTGGTAGTGGGAGTGGA+TGG - chr3_4:6303724-6303743 Msa0487420:CDS 55.0%
!! GACTGGTAGTGGGAGTGGAT+GGG - chr3_4:6303725-6303744 Msa0487420:CDS 55.0%
!! ACTGGTAGTGGGAGTGGATG+GGG - chr3_4:6303726-6303745 Msa0487420:CDS 55.0%
GAAAGTGGAGGCAGTGGCTA+CGG - chr3_4:6303807-6303826 Msa0487420:CDS 55.0%
TGAGTCGGGTCACATGGCTA+GGG - chr3_4:6302221-6302240 Msa0487420:intron 55.0%
TGAGTCGGGTCACATGGCTA+GGG - chr3_4:6302221-6302240 Msa0487420:intron 55.0%
GCTAGGGAATGCACCCAAGA+GGG - chr3_4:6302324-6302343 Msa0487420:intron 55.0%
CATGGCTAGGGAATGCACTC+AGG - chr3_4:6304100-6304119 Msa0487420:intron 55.0%
GCTAGGGAATGCACTCAGGA+GGG - chr3_4:6304104-6304123 Msa0487420:intron 55.0%
TGAGTCGGGTCACATGGCTA+GGG - chr3_4:6302221-6302240 Msa0487420:intron 55.0%
!! GAACTTCAAGCAGTGCTGGC+TGG + chr3_4:6304551-6304570 None:intergenic 55.0%
CAGCGAACTTCAAGCAGTGC+TGG + chr3_4:6304555-6304574 None:intergenic 55.0%
GGTGGGGCATGCCACAAATG+TGG - chr3_4:6302198-6302217 Msa0487420:CDS 60.0%
GTGAGTCGGGTCACATGGCT+AGG - chr3_4:6302220-6302239 Msa0487420:intron 60.0%
! GCTAGGGAGTGCACCCAAGA+GGG - chr3_4:6302237-6302256 Msa0487420:intron 60.0%
TCCACCTCCACCACCCTCTT+GGG + chr3_4:6302253-6302272 None:intergenic 60.0%
GGCTAGGGAATGCACCCAAG+AGG - chr3_4:6302323-6302342 Msa0487420:intron 60.0%
AGGGAATGCACCCAAGAGGG+TGG - chr3_4:6302327-6302346 Msa0487420:intron 60.0%
GAATGCACCCAAGAGGGTGG+TGG - chr3_4:6302330-6302349 Msa0487420:intron 60.0%
TCCACCTCCACCACCCTCTT+GGG + chr3_4:6302253-6302272 None:intergenic 60.0%
!! AAGAGGGTGGTGGAGGTGGA+GGG - chr3_4:6302253-6302272 Msa0487420:intron 60.0%
GTGAGTCGGGTCACATGGCT+AGG - chr3_4:6302220-6302239 Msa0487420:intron 60.0%
! GCTAGGGAGTGCACCCAAGA+GGG - chr3_4:6302237-6302256 Msa0487420:intron 60.0%
GGCTAGGGAATGCACCCAAG+AGG - chr3_4:6302323-6302342 Msa0487420:intron 60.0%
AGGGAATGCACCCAAGAGGG+TGG - chr3_4:6302327-6302346 Msa0487420:intron 60.0%
GAATGCACCCAAGAGGGTGG+TGG - chr3_4:6302330-6302349 Msa0487420:intron 60.0%
GTGAGTCGGGTCACATGGCT+AGG - chr3_4:6302220-6302239 Msa0487420:intron 60.0%
! GCTAGGGAGTGCACCCAAGA+GGG - chr3_4:6302237-6302256 Msa0487420:intron 60.0%
GGCTAGGGAATGCACCCAAG+AGG - chr3_4:6302323-6302342 Msa0487420:intron 60.0%
AGGGAATGCACCCAAGAGGG+TGG - chr3_4:6302327-6302346 Msa0487420:intron 60.0%
GAATGCACCCAAGAGGGTGG+TGG - chr3_4:6302330-6302349 Msa0487420:intron 60.0%
! TGCACCCAAGAAGGTGGTGG+AGG - chr3_4:6302774-6302793 Msa0487420:intron 60.0%
!! ACCCAAGAAGGTGGTGGAGG+TGG - chr3_4:6302777-6302796 Msa0487420:intron 60.0%
CTCCACCTCCACCACCTTCT+TGG + chr3_4:6302782-6302801 None:intergenic 60.0%
!! CAAGAAGGTGGTGGAGGTGG+AGG - chr3_4:6302780-6302799 Msa0487420:intron 60.0%
GTGAGTCAGGTCACATGGCC+AGG - chr3_4:6302832-6302851 Msa0487420:intron 60.0%
!! TGTCAACGATGGTGGTGGGG+TGG - chr3_4:6302971-6302990 Msa0487420:intron 60.0%
!! AACGATGGTGGTGGGGTGGA+TGG - chr3_4:6302975-6302994 Msa0487420:intron 60.0%
!! ACGATGGTGGTGGGGTGGAT+GGG - chr3_4:6302976-6302995 Msa0487420:intron 60.0%
!! GATGGTGGTAGTGGATGGGG+AGG - chr3_4:6303007-6303026 Msa0487420:intron 60.0%
!! GGTGCTGCTCCTGGGAAGAA+TGG - chr3_4:6303148-6303167 Msa0487420:CDS 60.0%
CATCCACTCTCGCCACCAGA+GGG + chr3_4:6303178-6303197 None:intergenic 60.0%
! CTCTGGTGGCGAGAGTGGAT+GGG - chr3_4:6303177-6303196 Msa0487420:CDS 60.0%
! TCTGGTGGCGAGAGTGGATG+GGG - chr3_4:6303178-6303197 Msa0487420:CDS 60.0%
GAGAGTGGATGGGGAGCTAC+TGG - chr3_4:6303187-6303206 Msa0487420:CDS 60.0%
AGTGGATGGGGAGCTACTGG+TGG - chr3_4:6303190-6303209 Msa0487420:CDS 60.0%
CATCCACTCTCGCCACCAGA+GGG + chr3_4:6303178-6303197 None:intergenic 60.0%
! CTCTGGTGGCGAGAGTGGAT+GGG - chr3_4:6303177-6303196 Msa0487420:CDS 60.0%
! TCTGGTGGCGAGAGTGGATG+GGG - chr3_4:6303178-6303197 Msa0487420:CDS 60.0%
GGAGCCACAACTGCCAGCAA+TGG - chr3_4:6303445-6303464 Msa0487420:CDS 60.0%
GCCACAACTGCCAGCAATGG+TGG - chr3_4:6303448-6303467 Msa0487420:CDS 60.0%
CCCACCATTGCTGGCAGTTG+TGG + chr3_4:6303452-6303471 None:intergenic 60.0%
!! ACTGCCAGCAATGGTGGGTC+CGG - chr3_4:6303454-6303473 Msa0487420:CDS 60.0%
!! TTCTGGATGGGTGCTGCTCC+TGG - chr3_4:6303486-6303505 Msa0487420:CDS 60.0%
!! TCTGGATGGGTGCTGCTCCT+GGG - chr3_4:6303487-6303506 Msa0487420:CDS 60.0%
! ACTCCTTCTGGTGGCGAGAG+TGG - chr3_4:6303519-6303538 Msa0487420:CDS 60.0%
CATCCACTCTCGCCACCAGA+AGG + chr3_4:6303178-6303197 None:intergenic 60.0%
! CTTCTGGTGGCGAGAGTGGA+TGG - chr3_4:6303523-6303542 Msa0487420:CDS 60.0%
! TCTGGTGGCGAGAGTGGATG+GGG - chr3_4:6303178-6303197 Msa0487420:CDS 60.0%
GGAGTCACAGCTGCCAGCAA+CGG - chr3_4:6303618-6303637 Msa0487420:intron 60.0%
!! GGAGAGACTGGTAGTGGGAG+TGG - chr3_4:6303720-6303739 Msa0487420:CDS 60.0%
! GTAGTGGGAGTGGATGGGGA+GGG - chr3_4:6303730-6303749 Msa0487420:CDS 60.0%
! GAGGTGGTAGAGGTGGTGGT+GGG - chr3_4:6303847-6303866 Msa0487420:CDS 60.0%
! AGGTGGTAGAGGTGGTGGTG+GGG - chr3_4:6303848-6303867 Msa0487420:CDS 60.0%
GTGTGGTGAGTCGGGTCACA+TGG - chr3_4:6303881-6303900 Msa0487420:CDS 60.0%
GTGAGTCGGGTCACATGGCT+AGG - chr3_4:6302220-6302239 Msa0487420:intron 60.0%
GTGTGGTGAGTCGGGTCACA+TGG - chr3_4:6303881-6303900 Msa0487420:CDS 60.0%
GTGAGTCGGGTCACATGGCT+AGG - chr3_4:6302220-6302239 Msa0487420:intron 60.0%
GGCTAGGGAATGCACCCAAG+AGG - chr3_4:6302323-6302342 Msa0487420:intron 60.0%
AGGGAATGCACCCAAGAGGG+TGG - chr3_4:6302327-6302346 Msa0487420:intron 60.0%
GAATGCACCCAAGAGGGTGG+TGG - chr3_4:6302330-6302349 Msa0487420:intron 60.0%
ACCACCTCCACCACCCTCTT+GGG + chr3_4:6304024-6304043 None:intergenic 60.0%
GGCTAGGGAATGCACTCAGG+AGG - chr3_4:6304103-6304122 Msa0487420:intron 60.0%
AGGGAATGCACTCAGGAGGG+TGG - chr3_4:6304107-6304126 Msa0487420:intron 60.0%
GAATGCACTCAGGAGGGTGG+TGG - chr3_4:6304110-6304129 Msa0487420:intron 60.0%
CATGGCTAGGGACTGCACTC+AGG - chr3_4:6304211-6304230 Msa0487420:CDS 60.0%
GCTAGGGACTGCACTCAGGA+GGG - chr3_4:6304215-6304234 Msa0487420:CDS 60.0%
GTGTGGTGAGTCGGGTCACA+TGG - chr3_4:6303881-6303900 Msa0487420:CDS 60.0%
GTGAGTCGGGTCACATGGCT+AGG - chr3_4:6302220-6302239 Msa0487420:intron 60.0%
! GGCTAGGGAGTGCACCCAAG+AGG - chr3_4:6302236-6302255 Msa0487420:intron 65.0%
! AGGGAGTGCACCCAAGAGGG+TGG - chr3_4:6302240-6302259 Msa0487420:intron 65.0%
GAGTGCACCCAAGAGGGTGG+TGG - chr3_4:6302243-6302262 Msa0487420:intron 65.0%
! TGCACCCAAGAGGGTGGTGG+AGG - chr3_4:6302246-6302265 Msa0487420:intron 65.0%
!! ACCCAAGAGGGTGGTGGAGG+TGG - chr3_4:6302249-6302268 Msa0487420:intron 65.0%
CTCCACCTCCACCACCCTCT+TGG + chr3_4:6302254-6302273 None:intergenic 65.0%
!! CAAGAGGGTGGTGGAGGTGG+AGG - chr3_4:6302252-6302271 Msa0487420:intron 65.0%
!! AGGGTGGTGGAGGTGGAGGA+AGG - chr3_4:6302256-6302275 Msa0487420:intron 65.0%
!! GGGTGGTGGAGGTGGAGGAA+GGG - chr3_4:6302257-6302276 Msa0487420:intron 65.0%
!! GGTGGTGGAGGTGGAGGAAG+GGG - chr3_4:6302258-6302277 Msa0487420:intron 65.0%
! TGCACCCAAGAGGGTGGTGG+AGG - chr3_4:6302246-6302265 Msa0487420:intron 65.0%
!! ACCCAAGAGGGTGGTGGAGG+TGG - chr3_4:6302249-6302268 Msa0487420:intron 65.0%
CTCCACCTCCACCACCCTCT+TGG + chr3_4:6302254-6302273 None:intergenic 65.0%
!! CAAGAGGGTGGTGGAGGTGG+AGG - chr3_4:6302252-6302271 Msa0487420:intron 65.0%
! GGCTAGGGAGTGCACCCAAG+AGG - chr3_4:6302236-6302255 Msa0487420:intron 65.0%
! AGGGAGTGCACCCAAGAGGG+CGG - chr3_4:6302240-6302259 Msa0487420:intron 65.0%
TCCACCTCCACCGCCCTCTT+GGG + chr3_4:6302427-6302446 None:intergenic 65.0%
! TGCACCCAAGAGGGTGGTGG+TGG - chr3_4:6302246-6302265 Msa0487420:intron 65.0%
!! ACCCAAGAGGGTGGTGGTGG+AGG - chr3_4:6302510-6302529 Msa0487420:intron 65.0%
CCCTCCACCACCACCCTCTT+GGG + chr3_4:6302514-6302533 None:intergenic 65.0%
!! CCCAAGAGGGTGGTGGTGGA+GGG - chr3_4:6302511-6302530 Msa0487420:intron 65.0%
TCCCTCCACCACCACCCTCT+TGG + chr3_4:6302515-6302534 None:intergenic 65.0%
!! AAGAGGGTGGTGGTGGAGGG+AGG - chr3_4:6302514-6302533 Msa0487420:intron 65.0%
!! AGAGGGTGGTGGTGGAGGGA+GGG - chr3_4:6302515-6302534 Msa0487420:intron 65.0%
! GGCTAGGGAGTGCACCCAAG+AGG - chr3_4:6302236-6302255 Msa0487420:intron 65.0%
! AGGGAGTGCACCCAAGAGGG+CGG - chr3_4:6302240-6302259 Msa0487420:intron 65.0%
TCCACCTCCACCGCCCTCTT+GGG + chr3_4:6302427-6302446 None:intergenic 65.0%
! TGCACCCAAGAGGGTGGTGG+TGG - chr3_4:6302246-6302265 Msa0487420:intron 65.0%
!! ACCCAAGAGGGTGGTGGTGG+AGG - chr3_4:6302510-6302529 Msa0487420:intron 65.0%
CCCTCCACCACCACCCTCTT+GGG + chr3_4:6302514-6302533 None:intergenic 65.0%
!! CCCAAGAGGGTGGTGGTGGA+GGG - chr3_4:6302511-6302530 Msa0487420:intron 65.0%
TCCCTCCACCACCACCCTCT+TGG + chr3_4:6302515-6302534 None:intergenic 65.0%
!! AAGAGGGTGGTGGTGGAGGG+AGG - chr3_4:6302514-6302533 Msa0487420:intron 65.0%
!! AGAGGGTGGTGGTGGAGGGA+GGG - chr3_4:6302515-6302534 Msa0487420:intron 65.0%
!! AAGGTGGTGGAGGTGGAGGG+AGG - chr3_4:6302784-6302803 Msa0487420:intron 65.0%
!! AGGTGGTGGAGGTGGAGGGA+GGG - chr3_4:6302785-6302804 Msa0487420:intron 65.0%
ACTCTCCTGGGTGCACTCCC+TGG + chr3_4:6302853-6302872 None:intergenic 65.0%
! AGGGAGTGCACCCAGGAGAG+TGG - chr3_4:6302852-6302871 Msa0487420:intron 65.0%
GAGTGCACCCAGGAGAGTGG+TGG - chr3_4:6302855-6302874 Msa0487420:intron 65.0%
TGCACCCAGGAGAGTGGTGG+TGG - chr3_4:6302858-6302877 Msa0487420:intron 65.0%
!! ACCCAGGAGAGTGGTGGTGG+AGG - chr3_4:6302861-6302880 Msa0487420:intron 65.0%
CCCTCCACCACCACTCTCCT+GGG + chr3_4:6302865-6302884 None:intergenic 65.0%
!! CCCAGGAGAGTGGTGGTGGA+GGG - chr3_4:6302862-6302881 Msa0487420:intron 65.0%
ACCCTCCACCACCACTCTCC+TGG + chr3_4:6302866-6302885 None:intergenic 65.0%
!! AGGAGAGTGGTGGTGGAGGG+TGG - chr3_4:6302865-6302884 Msa0487420:intron 65.0%
!! GGAGAGTGGTGGTGGAGGGT+GGG - chr3_4:6302866-6302885 Msa0487420:intron 65.0%
!! GAGAGTGGTGGTGGAGGGTG+GGG - chr3_4:6302867-6302886 Msa0487420:intron 65.0%
GGTGGACGTGGAAGAGGTCG+TGG - chr3_4:6302897-6302916 Msa0487420:intron 65.0%
!! CGATGGTGGTGGGGTGGATG+GGG - chr3_4:6302977-6302996 Msa0487420:intron 65.0%
!! GGTAGTGGATGGGGAGGGAC+TGG - chr3_4:6303013-6303032 Msa0487420:intron 65.0%
AGTGGATGGGGAGGGACTGG+TGG - chr3_4:6303016-6303035 Msa0487420:intron 65.0%
!! TCTGGATGGGGTGCTGCTCC+TGG - chr3_4:6303139-6303158 Msa0487420:CDS 65.0%
!! CTGGATGGGGTGCTGCTCCT+GGG - chr3_4:6303140-6303159 Msa0487420:CDS 65.0%
! ACTCCCTCTGGTGGCGAGAG+TGG - chr3_4:6303172-6303191 Msa0487420:CDS 65.0%
CCATCCACTCTCGCCACCAG+AGG + chr3_4:6303179-6303198 None:intergenic 65.0%
! CCTCTGGTGGCGAGAGTGGA+TGG - chr3_4:6303176-6303195 Msa0487420:CDS 65.0%
! ACTCCCTCTGGTGGCGAGAG+TGG - chr3_4:6303172-6303191 Msa0487420:CDS 65.0%
CCATCCACTCTCGCCACCAG+AGG + chr3_4:6303179-6303198 None:intergenic 65.0%
! CCTCTGGTGGCGAGAGTGGA+TGG - chr3_4:6303176-6303195 Msa0487420:CDS 65.0%
GAGAGTGGATGGGGAGCGAC+TGG - chr3_4:6303361-6303380 Msa0487420:CDS 65.0%
AGTGGATGGGGAGCGACTGG+TGG - chr3_4:6303364-6303383 Msa0487420:CDS 65.0%
GTGGCGAGAGTGGATGGGGA+GGG - chr3_4:6303182-6303201 Msa0487420:CDS 65.0%
GAGAGTGGATGGGGAGGGAC+TGG - chr3_4:6303534-6303553 Msa0487420:intron 65.0%
AGTGGATGGGGAGGGACTGG+TGG - chr3_4:6303016-6303035 Msa0487420:intron 65.0%
GTCACAGCTGCCAGCAACGG+TGG - chr3_4:6303621-6303640 Msa0487420:intron 65.0%
!! GGTAGTGGGAGTGGATGGGG+AGG - chr3_4:6303729-6303748 Msa0487420:CDS 65.0%
AGTGGATGGGGAGGGACTGG+TGG - chr3_4:6303016-6303035 Msa0487420:intron 65.0%
AGTGGAGGCAGTGGCTACGG+AGG - chr3_4:6303810-6303829 Msa0487420:CDS 65.0%
! AGTGGCTACGGAGGTGGTGG+TGG - chr3_4:6303819-6303838 Msa0487420:CDS 65.0%
!! TACGGAGGTGGTGGTGGACG+AGG - chr3_4:6303825-6303844 Msa0487420:CDS 65.0%
GGTGGACGAGGAGGTGGTAG+AGG - chr3_4:6303837-6303856 Msa0487420:CDS 65.0%
GGACGAGGAGGTGGTAGAGG+TGG - chr3_4:6303840-6303859 Msa0487420:CDS 65.0%
CGAGGAGGTGGTAGAGGTGG+TGG - chr3_4:6303843-6303862 Msa0487420:CDS 65.0%
! GGAGGTGGTAGAGGTGGTGG+TGG - chr3_4:6303846-6303865 Msa0487420:CDS 65.0%
GGTGGGGCGTGCTTCAAGTG+TGG - chr3_4:6303864-6303883 Msa0487420:CDS 65.0%
! CATGGCTAGGGAGTGCACCC+AGG - chr3_4:6302233-6302252 Msa0487420:intron 65.0%
! GCTAGGGAGTGCACCCAGGA+GGG - chr3_4:6303903-6303922 Msa0487420:CDS 65.0%
CCTTCCTCCACCACCCTCCT+GGG + chr3_4:6303919-6303938 None:intergenic 65.0%
!! CCAGGAGGGTGGTGGAGGAA+GGG - chr3_4:6303917-6303936 Msa0487420:CDS 65.0%
!! CAGGAGGGTGGTGGAGGAAG+GGG - chr3_4:6303918-6303937 Msa0487420:CDS 65.0%
GAGGAGGCGGAAGAGGTGGT+GGG - chr3_4:6303952-6303971 Msa0487420:CDS 65.0%
AGGAGGCGGAAGAGGTGGTG+GGG - chr3_4:6303953-6303972 Msa0487420:CDS 65.0%
GGTGGGGCGTGCTACAAGTG+TGG - chr3_4:6303969-6303988 Msa0487420:CDS 65.0%
! TGCACCCAAGAGGGTGGTGG+AGG - chr3_4:6302246-6302265 Msa0487420:intron 65.0%
!! ACCCAAGAGGGTGGTGGAGG+TGG - chr3_4:6302249-6302268 Msa0487420:intron 65.0%
CACCACCTCCACCACCCTCT+TGG + chr3_4:6304025-6304044 None:intergenic 65.0%
!! CAAGAGGGTGGTGGAGGTGG+TGG - chr3_4:6302252-6302271 Msa0487420:intron 65.0%
GAGGAGGCGGAAGAGGTGGT+GGG - chr3_4:6303952-6303971 Msa0487420:CDS 65.0%
AGGAGGCGGAAGAGGTGGTG+GGG - chr3_4:6303953-6303972 Msa0487420:CDS 65.0%
GGTGGGGCGTGCTACAAGTG+TGG - chr3_4:6303969-6303988 Msa0487420:CDS 65.0%
! TGCACTCAGGAGGGTGGTGG+AGG - chr3_4:6304113-6304132 Msa0487420:intron 65.0%
!! ACTCAGGAGGGTGGTGGAGG+CGG - chr3_4:6304116-6304135 Msa0487420:intron 65.0%
AGTGGACGAGGAGGCGGAAG+TGG - chr3_4:6304152-6304171 Msa0487420:intron 65.0%
GAGGAGGCGGAAGTGGTGGT+GGG - chr3_4:6304159-6304178 Msa0487420:intron 65.0%
GGCTAGGGACTGCACTCAGG+AGG - chr3_4:6304214-6304233 Msa0487420:CDS 65.0%
AGGGACTGCACTCAGGAGGG+TGG - chr3_4:6304218-6304237 Msa0487420:CDS 65.0%
GACTGCACTCAGGAGGGTGG+TGG - chr3_4:6304221-6304240 Msa0487420:CDS 65.0%
! TGCACTCAGGAGGGTGGTGG+AGG - chr3_4:6304113-6304132 Msa0487420:intron 65.0%
!! ACTCAGGAGGGTGGTGGAGG+CGG - chr3_4:6304116-6304135 Msa0487420:intron 65.0%
GGTGGGGCGTGCTACAAGTG+TGG - chr3_4:6303969-6303988 Msa0487420:CDS 65.0%
! CATGGCTAGGGAGTGCACCC+AGG - chr3_4:6302233-6302252 Msa0487420:intron 65.0%
! GCTAGGGAGTGCACCCAGGA+GGG - chr3_4:6303903-6303922 Msa0487420:CDS 65.0%
CCTTCCTCCACCACCCTCCT+GGG + chr3_4:6303919-6303938 None:intergenic 65.0%
!! CCAGGAGGGTGGTGGAGGAA+GGG - chr3_4:6303917-6303936 Msa0487420:CDS 65.0%
!! CAGGAGGGTGGTGGAGGAAG+GGG - chr3_4:6303918-6303937 Msa0487420:CDS 65.0%
!! AGGAGGGTGGTGGAGGAAGG+GGG - chr3_4:6303919-6303938 Msa0487420:CDS 65.0%
GAGGAGGCGGAAGTGGTGGT+GGG - chr3_4:6304159-6304178 Msa0487420:intron 65.0%
GGTGGGCCGTGCTACAAGTG+TGG - chr3_4:6304389-6304408 Msa0487420:CDS 65.0%
! CATGGCTAGGGAGTGCACCC+AGG - chr3_4:6302233-6302252 Msa0487420:intron 65.0%
! GCTAGGGAGTGCACCCAGGA+GGG - chr3_4:6303903-6303922 Msa0487420:CDS 65.0%
CACCACCACGACCACGACCG+CGG + chr3_4:6302182-6302201 None:intergenic 70.0%
GCGGTCGTGGTCGTGGTGGT+GGG - chr3_4:6302181-6302200 Msa0487420:CDS 70.0%
! CGGTCGTGGTCGTGGTGGTG+GGG - chr3_4:6302182-6302201 Msa0487420:CDS 70.0%
GGTGGAGGTGGAGGAAGGGG+TGG - chr3_4:6302261-6302280 Msa0487420:intron 70.0%
GGAGGTGGAGGAAGGGGTGG+TGG - chr3_4:6302264-6302283 Msa0487420:intron 70.0%
! GGTGGAGGAAGGGGTGGTGG+CGG - chr3_4:6302267-6302286 Msa0487420:intron 70.0%
!! GGTGGTGGAGGTGGAGGGAG+AGG - chr3_4:6302345-6302364 Msa0487420:intron 70.0%
GGTGGAGGTGGAGGGAGAGG+CGG - chr3_4:6302348-6302367 Msa0487420:intron 70.0%
GAGTGCACCCAAGAGGGCGG+TGG - chr3_4:6302417-6302436 Msa0487420:intron 70.0%
TGCACCCAAGAGGGCGGTGG+AGG - chr3_4:6302420-6302439 Msa0487420:intron 70.0%
ACCCAAGAGGGCGGTGGAGG+TGG - chr3_4:6302423-6302442 Msa0487420:intron 70.0%
CTCCACCTCCACCGCCCTCT+TGG + chr3_4:6302428-6302447 None:intergenic 70.0%
CAAGAGGGCGGTGGAGGTGG+AGG - chr3_4:6302426-6302445 Msa0487420:intron 70.0%
AGGGCGGTGGAGGTGGAGGA+AGG - chr3_4:6302430-6302449 Msa0487420:intron 70.0%
GGGCGGTGGAGGTGGAGGAA+GGG - chr3_4:6302431-6302450 Msa0487420:intron 70.0%
GGCGGTGGAGGTGGAGGAAG+GGG - chr3_4:6302432-6302451 Msa0487420:intron 70.0%
GGTGGAGGTGGAGGAAGGGG+TGG - chr3_4:6302261-6302280 Msa0487420:intron 70.0%
GGAGGTGGAGGAAGGGGTGG+TGG - chr3_4:6302264-6302283 Msa0487420:intron 70.0%
! GGTGGAGGAAGGGGTGGTGG+TGG - chr3_4:6302267-6302286 Msa0487420:intron 70.0%
!! GAGGGTGGTGGTGGAGGGAG+GGG - chr3_4:6302516-6302535 Msa0487420:intron 70.0%
GAGTGCACCCAAGAGGGCGG+TGG - chr3_4:6302417-6302436 Msa0487420:intron 70.0%
TGCACCCAAGAGGGCGGTGG+AGG - chr3_4:6302420-6302439 Msa0487420:intron 70.0%
ACCCAAGAGGGCGGTGGAGG+TGG - chr3_4:6302423-6302442 Msa0487420:intron 70.0%
CTCCACCTCCACCGCCCTCT+TGG + chr3_4:6302428-6302447 None:intergenic 70.0%
CAAGAGGGCGGTGGAGGTGG+AGG - chr3_4:6302426-6302445 Msa0487420:intron 70.0%
AGGGCGGTGGAGGTGGAGGA+AGG - chr3_4:6302430-6302449 Msa0487420:intron 70.0%
GGGCGGTGGAGGTGGAGGAA+GGG - chr3_4:6302431-6302450 Msa0487420:intron 70.0%
GGCGGTGGAGGTGGAGGAAG+GGG - chr3_4:6302432-6302451 Msa0487420:intron 70.0%
GGTGGAGGTGGAGGAAGGGG+TGG - chr3_4:6302261-6302280 Msa0487420:intron 70.0%
GGAGGTGGAGGAAGGGGTGG+TGG - chr3_4:6302264-6302283 Msa0487420:intron 70.0%
! GGTGGAGGAAGGGGTGGTGG+TGG - chr3_4:6302267-6302286 Msa0487420:intron 70.0%
!! GAGGGTGGTGGTGGAGGGAG+GGG - chr3_4:6302516-6302535 Msa0487420:intron 70.0%
!! GGTGGTGGAGGTGGAGGGAG+GGG - chr3_4:6302345-6302364 Msa0487420:intron 70.0%
! CATGGCCAGGGAGTGCACCC+AGG - chr3_4:6302845-6302864 Msa0487420:intron 70.0%
!! AGTGGTGGTGGAGGGTGGGG+TGG - chr3_4:6302870-6302889 Msa0487420:intron 70.0%
GGCAGCGGTGGACGTGGAAG+AGG - chr3_4:6302891-6302910 Msa0487420:intron 70.0%
CGTGGAAGAGGTCGTGGCCG+TGG - chr3_4:6302903-6302922 Msa0487420:intron 70.0%
AGAGGTCGTGGCCGTGGACG+TGG - chr3_4:6302909-6302928 Msa0487420:intron 70.0%
GGTGGCGAGAGTGGATGGGG+AGG - chr3_4:6303181-6303200 Msa0487420:CDS 70.0%
GCTGCCAGCAACGGTGGAGC+TGG - chr3_4:6303627-6303646 Msa0487420:intron 70.0%
GGGAGTGGATGGGGAGGGAC+TGG - chr3_4:6303735-6303754 Msa0487420:CDS 70.0%
GGAGGCAGTGGCTACGGAGG+TGG - chr3_4:6303813-6303832 Msa0487420:CDS 70.0%
GGCAGTGGCTACGGAGGTGG+TGG - chr3_4:6303816-6303835 Msa0487420:CDS 70.0%
!! GGAGGTGGTGGTGGACGAGG+AGG - chr3_4:6303828-6303847 Msa0487420:CDS 70.0%
!! GGTGGTGGTGGACGAGGAGG+TGG - chr3_4:6303831-6303850 Msa0487420:CDS 70.0%
! GGCTAGGGAGTGCACCCAGG+AGG - chr3_4:6303902-6303921 Msa0487420:CDS 70.0%
! AGGGAGTGCACCCAGGAGGG+TGG - chr3_4:6303906-6303925 Msa0487420:CDS 70.0%
GAGTGCACCCAGGAGGGTGG+TGG - chr3_4:6303909-6303928 Msa0487420:CDS 70.0%
! TGCACCCAGGAGGGTGGTGG+AGG - chr3_4:6303912-6303931 Msa0487420:CDS 70.0%
!! CCCAGGAGGGTGGTGGAGGA+AGG - chr3_4:6303916-6303935 Msa0487420:CDS 70.0%
CCCTTCCTCCACCACCCTCC+TGG + chr3_4:6303920-6303939 None:intergenic 70.0%
!! GAGGGTGGTGGAGGAAGGGG+AGG - chr3_4:6303921-6303940 Msa0487420:CDS 70.0%
!! GGTGGTGGAGGAAGGGGAGG+TGG - chr3_4:6303924-6303943 Msa0487420:CDS 70.0%
GGTGGAGGAAGGGGAGGTGG+TGG - chr3_4:6303927-6303946 Msa0487420:CDS 70.0%
!! GGAAGGGGAGGTGGTGGACG+AGG - chr3_4:6303933-6303952 Msa0487420:CDS 70.0%
!! AGGGGAGGTGGTGGACGAGG+AGG - chr3_4:6303936-6303955 Msa0487420:CDS 70.0%
!! GGAGGTGGTGGACGAGGAGG+CGG - chr3_4:6303939-6303958 Msa0487420:CDS 70.0%
GGTGGACGAGGAGGCGGAAG+AGG - chr3_4:6303945-6303964 Msa0487420:CDS 70.0%
GGACGAGGAGGCGGAAGAGG+TGG - chr3_4:6303948-6303967 Msa0487420:CDS 70.0%
CGAGGAGGCGGAAGAGGTGG+TGG - chr3_4:6303951-6303970 Msa0487420:CDS 70.0%
!! GGTGGTGGAGGTGGTGGACG+AGG - chr3_4:6304029-6304048 Msa0487420:CDS 70.0%
!! GGTGGAGGTGGTGGACGAGG+AGG - chr3_4:6304032-6304051 Msa0487420:CDS 70.0%
!! GGAGGTGGTGGACGAGGAGG+CGG - chr3_4:6303939-6303958 Msa0487420:CDS 70.0%
GGTGGACGAGGAGGCGGAAG+AGG - chr3_4:6303945-6303964 Msa0487420:CDS 70.0%
GGACGAGGAGGCGGAAGAGG+TGG - chr3_4:6303948-6303967 Msa0487420:CDS 70.0%
CGAGGAGGCGGAAGAGGTGG+TGG - chr3_4:6303951-6303970 Msa0487420:CDS 70.0%
!! AGGAGGGTGGTGGAGGCGGA+GGG - chr3_4:6304120-6304139 Msa0487420:intron 70.0%
TGGGGAGGCAGTGGACGAGG+AGG - chr3_4:6304143-6304162 Msa0487420:intron 70.0%
GGAGGCAGTGGACGAGGAGG+CGG - chr3_4:6304146-6304165 Msa0487420:intron 70.0%
GGACGAGGAGGCGGAAGTGG+TGG - chr3_4:6304155-6304174 Msa0487420:intron 70.0%
CGAGGAGGCGGAAGTGGTGG+TGG - chr3_4:6304158-6304177 Msa0487420:intron 70.0%
!! AGGAGGGTGGTGGAGGCGGA+GGG - chr3_4:6304120-6304139 Msa0487420:intron 70.0%
! GGCTAGGGAGTGCACCCAGG+AGG - chr3_4:6303902-6303921 Msa0487420:CDS 70.0%
! AGGGAGTGCACCCAGGAGGG+TGG - chr3_4:6303906-6303925 Msa0487420:CDS 70.0%
GAGTGCACCCAGGAGGGTGG+TGG - chr3_4:6303909-6303928 Msa0487420:CDS 70.0%
! TGCACCCAGGAGGGTGGTGG+AGG - chr3_4:6303912-6303931 Msa0487420:CDS 70.0%
!! CCCAGGAGGGTGGTGGAGGA+AGG - chr3_4:6303916-6303935 Msa0487420:CDS 70.0%
CCCTTCCTCCACCACCCTCC+TGG + chr3_4:6303920-6303939 None:intergenic 70.0%
!! GGAGGGTGGTGGAGGAAGGG+GGG - chr3_4:6303920-6303939 Msa0487420:CDS 70.0%
GGTGGACGAGGAGGCGGAAG+TGG - chr3_4:6303945-6303964 Msa0487420:CDS 70.0%
GGACGAGGAGGCGGAAGTGG+TGG - chr3_4:6304155-6304174 Msa0487420:intron 70.0%
CGAGGAGGCGGAAGTGGTGG+TGG - chr3_4:6304158-6304177 Msa0487420:intron 70.0%
! GGCTAGGGAGTGCACCCAGG+AGG - chr3_4:6303902-6303921 Msa0487420:CDS 70.0%
! AGGGAGTGCACCCAGGAGGG+TGG - chr3_4:6303906-6303925 Msa0487420:CDS 70.0%
GAGTGCACCCAGGAGGGTGG+TGG - chr3_4:6303909-6303928 Msa0487420:CDS 70.0%
! TGCACCCAGGAGGGTGGTGG+AGG - chr3_4:6303912-6303931 Msa0487420:CDS 70.0%
!! ACCCAGGAGGGTGGTGGAGG+CGG - chr3_4:6303915-6303934 Msa0487420:CDS 70.0%
TCCGCCTCCACCACCCTCCT+GGG + chr3_4:6304120-6304139 None:intergenic 70.0%
!! AGGAGGGTGGTGGAGGCGGA+GGG - chr3_4:6304120-6304139 Msa0487420:intron 70.0%
!! TGGGGAGGTGGTGGACGTGG+AGG - chr3_4:6304467-6304486 Msa0487420:CDS 70.0%
!! GGAGGTGGTGGACGTGGAGG+CGG - chr3_4:6304470-6304489 Msa0487420:CDS 70.0%
AGTGGAGGTGGTCGCGGCCG+CGG - chr3_4:6302162-6302181 Msa0487420:CDS 75.0%
CGCGGTCGTGGTCGTGGTGG+TGG - chr3_4:6302180-6302199 Msa0487420:CDS 75.0%
GGAGGTGGAGGGAGAGGCGG+TGG - chr3_4:6302351-6302370 Msa0487420:intron 75.0%
GGTGGAGGGAGAGGCGGTGG+CGG - chr3_4:6302354-6302373 Msa0487420:intron 75.0%
!! GGTGGTGGTGGAGGGAGGGG+TGG - chr3_4:6302519-6302538 Msa0487420:intron 75.0%
!! GGTGGTGGAGGGAGGGGTGG+TGG - chr3_4:6302522-6302541 Msa0487420:intron 75.0%
! GGTGGAGGGAGGGGTGGTGG+CGG - chr3_4:6302525-6302544 Msa0487420:intron 75.0%
!! GGTGGTGGTGGAGGGAGGGG+AGG - chr3_4:6302519-6302538 Msa0487420:intron 75.0%
!! GGTGGTGGAGGGAGGGGAGG+TGG - chr3_4:6302699-6302718 Msa0487420:intron 75.0%
GGTGGAGGGAGGGGAGGTGG+CGG - chr3_4:6302702-6302721 Msa0487420:intron 75.0%
! GGAGGGGAGGTGGCGGTGGT+GGG - chr3_4:6302709-6302728 Msa0487420:intron 75.0%
GGAGGTGGAGGGAGGGGCAG+CGG - chr3_4:6302792-6302811 Msa0487420:intron 75.0%
GGTGGAGGGTGGGGTGGCAG+CGG - chr3_4:6302876-6302895 Msa0487420:intron 75.0%
TGGGGTGGCAGCGGTGGACG+TGG - chr3_4:6302885-6302904 Msa0487420:intron 75.0%
!! CAGGAGGGTGGTGGAGGCGG+AGG - chr3_4:6304119-6304138 Msa0487420:intron 75.0%
!! AGGGTGGTGGAGGCGGAGGG+TGG - chr3_4:6304123-6304142 Msa0487420:intron 75.0%
!! GGGTGGTGGAGGCGGAGGGT+GGG - chr3_4:6304124-6304143 Msa0487420:intron 75.0%
!! GGTGGTGGAGGCGGAGGGTG+GGG - chr3_4:6304125-6304144 Msa0487420:intron 75.0%
GGGTGGGGAGGCAGTGGACG+AGG - chr3_4:6304140-6304159 Msa0487420:intron 75.0%
!! CAGGAGGGTGGTGGAGGCGG+AGG - chr3_4:6304119-6304138 Msa0487420:intron 75.0%
!! AGGGTGGTGGAGGCGGAGGG+TGG - chr3_4:6304123-6304142 Msa0487420:intron 75.0%
!! GGGTGGTGGAGGCGGAGGGT+GGG - chr3_4:6304124-6304143 Msa0487420:intron 75.0%
!! GGTGGTGGAGGCGGAGGGTG+GGG - chr3_4:6304125-6304144 Msa0487420:intron 75.0%
TGGGGAGGCGGTGGACGAGG+AGG - chr3_4:6304254-6304273 Msa0487420:CDS 75.0%
GGAGGCGGTGGACGAGGAGG+CGG - chr3_4:6304257-6304276 Msa0487420:CDS 75.0%
!! GGTGGTGGAGGAAGGGGGGC+TGG - chr3_4:6304344-6304363 Msa0487420:CDS 75.0%
GGTGGAGGAAGGGGGGCTGG+TGG - chr3_4:6304347-6304366 Msa0487420:CDS 75.0%
! GGAAGGGGGGCTGGTGGACG+AGG - chr3_4:6304353-6304372 Msa0487420:CDS 75.0%
! AGGGGGGCTGGTGGACGAGG+AGG - chr3_4:6304356-6304375 Msa0487420:CDS 75.0%
! GGGGCTGGTGGACGAGGAGG+CGG - chr3_4:6304359-6304378 Msa0487420:CDS 75.0%
CTCCGCCTCCACCACCCTCC+TGG + chr3_4:6304121-6304140 None:intergenic 75.0%
!! CAGGAGGGTGGTGGAGGCGG+AGG - chr3_4:6304119-6304138 Msa0487420:intron 75.0%
!! AGGGTGGTGGAGGCGGAGGG+TGG - chr3_4:6304123-6304142 Msa0487420:intron 75.0%
!! GGGTGGTGGAGGCGGAGGGT+GGG - chr3_4:6304124-6304143 Msa0487420:intron 75.0%
!! GGTGGTGGAGGCGGAGGGTG+GGG - chr3_4:6304125-6304144 Msa0487420:intron 75.0%
!! GGGTGGGGAGGTGGTGGACG+TGG - chr3_4:6304464-6304483 Msa0487420:CDS 75.0%
!! GGTGGTGGACGTGGAGGCGG+CGG - chr3_4:6304473-6304492 Msa0487420:CDS 75.0%
! GGCCGCGGTCGTGGTCGTGG+TGG - chr3_4:6302177-6302196 Msa0487420:CDS 80.0%
!!! GGAGGGAGGGGTGGTGGCGG+TGG - chr3_4:6302528-6302547 Msa0487420:intron 80.0%
!!! GGGAGGGGTGGTGGCGGTGG+TGG - chr3_4:6302531-6302550 Msa0487420:intron 80.0%
!! GGAGGGAGGGGAGGTGGCGG+TGG - chr3_4:6302705-6302724 Msa0487420:intron 80.0%
!! GGGAGGGGAGGTGGCGGTGG+TGG - chr3_4:6302708-6302727 Msa0487420:intron 80.0%
! GGAGGGTGGGGTGGCAGCGG+TGG - chr3_4:6302879-6302898 Msa0487420:intron 80.0%
! GGTGGAGGCGGAGGGTGGGG+AGG - chr3_4:6304128-6304147 Msa0487420:intron 80.0%
! GGCGGAGGGTGGGGAGGCAG+TGG - chr3_4:6304134-6304153 Msa0487420:intron 80.0%
! GGTGGAGGCGGAGGGTGGGG+AGG - chr3_4:6304128-6304147 Msa0487420:intron 80.0%
! GGAGGCGGAGGGTGGGGAGG+CGG - chr3_4:6304131-6304150 Msa0487420:intron 80.0%
! GGGTGGGGAGGCGGTGGACG+AGG - chr3_4:6304251-6304270 Msa0487420:CDS 80.0%
! GGCGGTGGACGAGGAGGCGG+CGG - chr3_4:6304260-6304279 Msa0487420:CDS 80.0%
! GGTGGACGAGGAGGCGGCGG+CGG - chr3_4:6304263-6304282 Msa0487420:CDS 80.0%
! GACGAGGAGGCGGCGGCGGT+GGG - chr3_4:6304267-6304286 Msa0487420:CDS 80.0%
! ACGAGGAGGCGGCGGCGGTG+GGG - chr3_4:6304268-6304287 Msa0487420:CDS 80.0%
! GGTGGAGGCGGAGGGTGGGG+AGG - chr3_4:6304128-6304147 Msa0487420:intron 80.0%
! GGAGGCGGAGGGTGGGGAGG+TGG - chr3_4:6304131-6304150 Msa0487420:intron 80.0%
! GGCGGAGGGTGGGGAGGTGG+TGG - chr3_4:6304458-6304477 Msa0487420:CDS 80.0%
! GGTGGACGTGGAGGCGGCGG+CGG - chr3_4:6304476-6304495 Msa0487420:CDS 80.0%
! GGTGGTCGCGGCCGCGGTCG+TGG - chr3_4:6302168-6302187 Msa0487420:CDS 85.0%
! CGCGGCCGCGGTCGTGGTCG+TGG - chr3_4:6302174-6302193 Msa0487420:CDS 85.0%
! GGCGGAGGGTGGGGAGGCGG+TGG - chr3_4:6304245-6304264 Msa0487420:CDS 85.0%
! GGACGAGGAGGCGGCGGCGG+TGG - chr3_4:6304266-6304285 Msa0487420:CDS 85.0%
! GGACGTGGAGGCGGCGGCGG+TGG - chr3_4:6304479-6304498 Msa0487420:CDS 85.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 6302153 6304949 6302153 ID=Msa0487420;Name=Msa0487420
chr3_4 mRNA 6302153 6304949 6302153 ID=Msa0487420-mRNA-1;Parent=Msa0487420;Name=Msa0487420-mRNA-1;_AED=0.54;_eAED=0.95;_QI=0|0|0|0.8|1|0.8|5|0|583
chr3_4 exon 6304190 6304949 6304190 ID=Msa0487420-mRNA-1:exon:2249;Parent=Msa0487420-mRNA-1
chr3_4 exon 6303636 6304100 6303636 ID=Msa0487420-mRNA-1:exon:2248;Parent=Msa0487420-mRNA-1
chr3_4 exon 6303112 6303552 6303112 ID=Msa0487420-mRNA-1:exon:2247;Parent=Msa0487420-mRNA-1
chr3_4 exon 6302370 6302374 6302370 ID=Msa0487420-mRNA-1:exon:2246;Parent=Msa0487420-mRNA-1
chr3_4 exon 6302153 6302230 6302153 ID=Msa0487420-mRNA-1:exon:2245;Parent=Msa0487420-mRNA-1
chr3_4 CDS 6304190 6304949 6304190 ID=Msa0487420-mRNA-1:cds;Parent=Msa0487420-mRNA-1
chr3_4 CDS 6303636 6304100 6303636 ID=Msa0487420-mRNA-1:cds;Parent=Msa0487420-mRNA-1
chr3_4 CDS 6303112 6303552 6303112 ID=Msa0487420-mRNA-1:cds;Parent=Msa0487420-mRNA-1
chr3_4 CDS 6302370 6302374 6302370 ID=Msa0487420-mRNA-1:cds;Parent=Msa0487420-mRNA-1
chr3_4 CDS 6302153 6302230 6302153 ID=Msa0487420-mRNA-1:cds;Parent=Msa0487420-mRNA-1
Gene Sequence

>Msa0487420

TACAATGACAGTGGAGGTGGTCGCGGCCGCGGTCGTGGTCGTGGTGGTGGGGCATGCCACAAATGTGGTGAGTCGGGTCACATGGCTAGGGAGTGCACCCAAGAGGGTGGTGGAGGTGGAGGAAGGGGTGGTGGCGGATCATGCTACAAATGTGGTGAGTCTGGTCACATGGCTAGGGAATGCACCCAAGAGGGTGGTGGAGGTGGAGGGAGAGGCGGTGGCGGCACATGCTACAAATGTGGTGAGTCGGGTCACATGGCTAGGGAGTGCACCCAAGAGGGCGGTGGAGGTGGAGGAAGGGGTGGTGGTGGATCTTGCTACAAATGTGGTGAGTCTGGTCACATGGCTAGGGAATGCACCCAAGAGGGTGGTGGTGGAGGGAGGGGTGGTGGCGGTGGTGGCACATGCTACAAATGTGGTGAGTCGGGTCACATGGCTAGGGAGTGCACCCAAGAGGGCGGTGGAGGTGGAGGAAGGGGTGGTGGTGGATCTTGCTACAAATGTGGTGAGTCTGGTCACATGGCTAGGGAATGCACCCAAGAGGGTGGTGGTGGAGGGAGGGGAGGTGGCGGTGGTGGGACATGCTACAAATGTGGTGAGTCCGGTCATATGGCTAGGGAATGCACCCAAGAAGGTGGTGGAGGTGGAGGGAGGGGCAGCGGTGCGTGCTACAAATGTGGTGAGTCAGGTCACATGGCCAGGGAGTGCACCCAGGAGAGTGGTGGTGGAGGGTGGGGTGGCAGCGGTGGACGTGGAAGAGTAACTGATGGTGGTAGTGGATGGGGAGGGACTGGTGGTAAAAGTTGGGGTGGAAATAATACAAATGAAGAAAGCAATACAGAAAAAAGTGGTTGGGGAGTCGCAGCTGCTGATAATAGTGGATCTGGAAATGAAAATTCTGGATGGGGTGCTGCTCCTGGGAAGAATGGAACTCCCTCTGGTGGCGAGAGTGGATGGGGAGCTACTGGTGGTAAAAGTTGGGGTGGAAACAGCTCAAACCAAGAAAGCAATACATCAAAAGGTGGTTGGGGGGCCACAGCTGCCAATAATGATGCACCTGAAAATGAAAAAGCTGGATGGAGTGCTTCTCATGGGAAGAATGAAACTCCCTCTGGTGGCGAGAGTGGATGGGGAGCGACTGGTGGTAAAAGTTGGGGTGGAAATAGCTCAAACAAAGAAAGCAATACAACTGAAGCTGGTTGGGGAGCCACAACTGCCAGCAATGGGACTGGTGGTAAAAGTTGGGGCGGCAACAGTACAAACCAAGAAAGCAATACGGAAAAAGGTGGTTGGGGAGTCACAGCTGCCAGCAACGGTGGAGCTGGAAATGAAAATTCTGGATGGGGTTCTACTCATGCGAAAAATGCAACTGCTTCTGGTGGTGCGAGTAAATGGGGAGAGACTGGTAGTGGGAGTGGATGGGGAGGGACTGGTGGTAAAAGTTGGGGTGGAAGTAGCACAAATGAAGAAAGCAATATAACAGAAAGTGGAGGCAGTGGCTACGGAGGTGGTGGTGGACGAGGAGGTGGTAGAGGTGGTGGTGGGGCGTGCTTCAAGTGTGGTGAGTCGGGTCACATGGCTAGGGAGTGCACCCAGGAGGGTGGTGGAGGAAGGGGAGGTGGTGGACGAGGAGGCGGAAGAGGTGGTGGGGCGTGCTACAAGTGTGGTTGGAAGGAAGTTTCGGGCTCAGTTGCCAGTAATCTTGGTTGGACATGGAAATTTAGAATTCAGGATGAACTGGTTCTCATG

Protein sequence

>Msa0487420

YNDSGGGRGRGRGRGGGACHKCGESGHMARECTQEGGGGGGRGGGGSCYKCGESGHMARECTQEGGGGGGRGGGGTCYKCGESGHMARECTQEGGGGGGRGGGGSCYKCGESGHMARECTQEGGGGGRGGGGGGTCYKCGESGHMARECTQEGGGGGGRGGGGSCYKCGESGHMARECTQEGGGGGRGGGGGGTCYKCGESGHMARECTQEGGGGGGRGSGACYKCGESGHMARECTQESGGGGWGGSGGRGRVTDGGSGWGGTGGKSWGGNNTNEESNTEKSGWGVAAADNSGSGNENSGWGAAPGKNGTPSGGESGWGATGGKSWGGNSSNQESNTSKGGWGATAANNDAPENEKAGWSASHGKNETPSGGESGWGATGGKSWGGNSSNKESNTTEAGWGATTASNGTGGKSWGGNSTNQESNTEKGGWGVTAASNGGAGNENSGWGSTHAKNATASGGASKWGETGSGSGWGGTGGKSWGGSSTNEESNITESGGSGYGGGGGRGGGRGGGGACFKCGESGHMARECTQEGGGGRGGGGRGGGRGGGACYKCGWKEVSGSVASNLGWTWKFRIQDELVLM