Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554740 | XP_003604348.4 | 89.601 | 577 | 17 | 1 | 1 | 534 | 1 | 577 | 0.0 | 1003 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554740 | sp|Q8BID8|FXL14_MOUSE | 34.395 | 314 | 178 | 18 | 230 | 516 | 85 | 397 | 7.05e-18 | 89.4 |
| Msa0554740 | sp|Q8BID8|FXL14_MOUSE | 31.190 | 311 | 164 | 16 | 182 | 442 | 86 | 396 | 4.74e-15 | 80.5 |
| Msa0554740 | sp|Q8BID8|FXL14_MOUSE | 31.746 | 315 | 190 | 16 | 105 | 394 | 82 | 396 | 1.07e-14 | 79.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554740 | A0A396I179 | 89.601 | 577 | 17 | 1 | 1 | 534 | 1 | 577 | 0.0 | 1003 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006390 | Msa0554740 | 0.800579 | 1.349033e-48 | -8.615850e-47 |
| Msa0011170 | Msa0554740 | 0.827735 | 1.327339e-54 | -8.615850e-47 |
| Msa0017510 | Msa0554740 | 0.805722 | 1.163997e-49 | -8.615850e-47 |
| Msa0031340 | Msa0554740 | 0.802143 | 6.451860e-49 | -8.615850e-47 |
| Msa0032110 | Msa0554740 | 0.804649 | 1.951963e-49 | -8.615850e-47 |
| Msa0034490 | Msa0554740 | 0.858669 | 7.030284e-63 | -8.615850e-47 |
| Msa0074700 | Msa0554740 | 0.824574 | 7.497930e-54 | -8.615850e-47 |
| Msa0079070 | Msa0554740 | 0.811243 | 7.718877e-51 | -8.615850e-47 |
| Msa0090340 | Msa0554740 | 0.834820 | 2.403015e-56 | -8.615850e-47 |
| Msa0095560 | Msa0554740 | 0.805887 | 1.074211e-49 | -8.615850e-47 |
| Msa0096450 | Msa0554740 | 0.804242 | 2.372813e-49 | -8.615850e-47 |
| Msa0114060 | Msa0554740 | 0.821061 | 4.931282e-53 | -8.615850e-47 |
| Msa0115270 | Msa0554740 | 0.806456 | 8.152836e-50 | -8.615850e-47 |
| Msa0117770 | Msa0554740 | 0.803311 | 3.703560e-49 | -8.615850e-47 |
| Msa0127650 | Msa0554740 | 0.818243 | 2.170247e-52 | -8.615850e-47 |
| Msa0131770 | Msa0554740 | 0.801582 | 8.410679e-49 | -8.615850e-47 |
| Msa0157290 | Msa0554740 | 0.805540 | 1.270501e-49 | -8.615850e-47 |
| Msa0166870 | Msa0554740 | 0.805385 | 1.369511e-49 | -8.615850e-47 |
| Msa0170320 | Msa0554740 | 0.808716 | 2.701131e-50 | -8.615850e-47 |
| Msa0178960 | Msa0554740 | 0.806390 | 8.420373e-50 | -8.615850e-47 |
| Msa0201070 | Msa0554740 | 0.807091 | 5.985628e-50 | -8.615850e-47 |
| Msa0208090 | Msa0554740 | 0.802108 | 6.561067e-49 | -8.615850e-47 |
| Msa0220580 | Msa0554740 | 0.849691 | 2.747903e-60 | -8.615850e-47 |
| Msa0226890 | Msa0554740 | 0.811915 | 5.512652e-51 | -8.615850e-47 |
| Msa0233300 | Msa0554740 | 0.813936 | 1.988691e-51 | -8.615850e-47 |
| Msa0236630 | Msa0554740 | 0.831056 | 2.071681e-55 | -8.615850e-47 |
| Msa0373450 | Msa0554740 | 0.800479 | 1.413520e-48 | -8.615850e-47 |
| Msa0373930 | Msa0554740 | 0.833176 | 6.197747e-56 | -8.615850e-47 |
| Msa0379640 | Msa0554740 | 0.821379 | 4.166650e-53 | -8.615850e-47 |
| Msa0402290 | Msa0554740 | 0.813166 | 2.936788e-51 | -8.615850e-47 |
| Msa0428930 | Msa0554740 | 0.804504 | 2.092975e-49 | -8.615850e-47 |
| Msa0431690 | Msa0554740 | 0.840157 | 1.029966e-57 | -8.615850e-47 |
| Msa0442200 | Msa0554740 | 0.805906 | 1.064433e-49 | -8.615850e-47 |
| Msa0444750 | Msa0554740 | -0.801416 | 9.096224e-49 | -8.615850e-47 |
| Msa0455040 | Msa0554740 | 0.808001 | 3.837238e-50 | -8.615850e-47 |
| Msa0475490 | Msa0554740 | 0.803935 | 2.748634e-49 | -8.615850e-47 |
| Msa0243710 | Msa0554740 | 0.813806 | 2.124528e-51 | -8.615850e-47 |
| Msa0258760 | Msa0554740 | 0.823256 | 1.527377e-53 | -8.615850e-47 |
| Msa0287410 | Msa0554740 | 0.805227 | 1.477832e-49 | -8.615850e-47 |
| Msa0302580 | Msa0554740 | -0.806424 | 8.281992e-50 | -8.615850e-47 |
| Msa0315290 | Msa0554740 | 0.828185 | 1.034687e-54 | -8.615850e-47 |
| Msa0344910 | Msa0554740 | 0.816927 | 4.295645e-52 | -8.615850e-47 |
| Msa0344980 | Msa0554740 | 0.803113 | 4.071153e-49 | -8.615850e-47 |
| Msa0355220 | Msa0554740 | 0.809529 | 1.809090e-50 | -8.615850e-47 |
| Msa0356960 | Msa0554740 | 0.800367 | 1.490086e-48 | -8.615850e-47 |
| Msa0493000 | Msa0554740 | 0.801063 | 1.074587e-48 | -8.615850e-47 |
| Msa0493630 | Msa0554740 | 0.841455 | 4.704378e-58 | -8.615850e-47 |
| Msa0502880 | Msa0554740 | 0.806117 | 9.610832e-50 | -8.615850e-47 |
| Msa0516440 | Msa0554740 | 0.809387 | 1.940464e-50 | -8.615850e-47 |
| Msa0521430 | Msa0554740 | 0.823418 | 1.400211e-53 | -8.615850e-47 |
| Msa0536220 | Msa0554740 | 0.802661 | 5.045826e-49 | -8.615850e-47 |
| Msa0542260 | Msa0554740 | 0.800324 | 1.520209e-48 | -8.615850e-47 |
| Msa0553460 | Msa0554740 | 0.801677 | 8.042002e-49 | -8.615850e-47 |
| Msa0554740 | Msa0562440 | 0.813714 | 2.225901e-51 | -8.615850e-47 |
| Msa0554740 | Msa0585230 | 0.838491 | 2.786531e-57 | -8.615850e-47 |
| Msa0554740 | Msa0585700 | 0.813962 | 1.962413e-51 | -8.615850e-47 |
| Msa0554740 | Msa0598790 | 0.803293 | 3.734793e-49 | -8.615850e-47 |
| Msa0554740 | Msa0599890 | 0.847410 | 1.177069e-59 | -8.615850e-47 |
| Msa0554740 | Msa0607540 | 0.801702 | 7.950044e-49 | -8.615850e-47 |
| Msa0554740 | Msa0608160 | 0.815851 | 7.478433e-52 | -8.615850e-47 |
| Msa0554740 | Msa0616160 | 0.800449 | 1.433707e-48 | -8.615850e-47 |
| Msa0554740 | Msa0626820 | 0.996349 | 2.099056e-226 | -8.615850e-47 |
| Msa0554740 | Msa0641670 | 0.803996 | 2.669950e-49 | -8.615850e-47 |
| Msa0554740 | Msa0648080 | 0.816423 | 5.572356e-52 | -8.615850e-47 |
| Msa0554740 | Msa0652810 | 0.811896 | 5.565128e-51 | -8.615850e-47 |
| Msa0554740 | Msa0661190 | -0.821192 | 4.600225e-53 | -8.615850e-47 |
| Msa0554740 | Msa0663240 | 0.866341 | 3.059770e-65 | -8.615850e-47 |
| Msa0554740 | Msa0663920 | 0.800449 | 1.433707e-48 | -8.615850e-47 |
| Msa0554740 | Msa0664950 | 0.947816 | 3.218121e-106 | -8.615850e-47 |
| Msa0554740 | Msa0672690 | 0.835059 | 2.091561e-56 | -8.615850e-47 |
| Msa0554740 | Msa0673450 | 0.801925 | 7.152831e-49 | -8.615850e-47 |
| Msa0554740 | Msa0688070 | 0.805690 | 1.182033e-49 | -8.615850e-47 |
| Msa0554740 | Msa0688480 | 0.854825 | 9.509553e-62 | -8.615850e-47 |
| Msa0554740 | Msa0689800 | 0.811779 | 5.901674e-51 | -8.615850e-47 |
| Msa0554740 | Msa0728630 | 0.804496 | 2.101094e-49 | -8.615850e-47 |
| Msa0554740 | Msa0743720 | 0.812830 | 3.479890e-51 | -8.615850e-47 |
| Msa0554740 | Msa0747060 | 0.811990 | 5.310948e-51 | -8.615850e-47 |
| Msa0554740 | Msa0766630 | 0.812034 | 5.194908e-51 | -8.615850e-47 |
| Msa0554740 | Msa0807470 | 0.839393 | 1.627956e-57 | -8.615850e-47 |
| Msa0554740 | Msa0820770 | 0.809748 | 1.622888e-50 | -8.615850e-47 |
| Msa0554740 | Msa0827980 | 0.801202 | 1.006572e-48 | -8.615850e-47 |
| Msa0554740 | Msa0828940 | 0.823576 | 1.285983e-53 | -8.615850e-47 |
| Msa0554740 | Msa0832340 | 0.800482 | 1.411591e-48 | -8.615850e-47 |
| Msa0554740 | Msa0846810 | 0.811707 | 6.118363e-51 | -8.615850e-47 |
| Msa0554740 | Msa0876850 | -0.813438 | 2.559699e-51 | -8.615850e-47 |
| Msa0554740 | Msa0880140 | 0.801236 | 9.904523e-49 | -8.615850e-47 |
| Msa0554740 | Msa0897880 | 0.800970 | 1.122425e-48 | -8.615850e-47 |
| Msa0554740 | Msa0923260 | -0.800826 | 1.201323e-48 | -8.615850e-47 |
| Msa0554740 | Msa0924310 | 0.801256 | 9.808719e-49 | -8.615850e-47 |
| Msa0554740 | Msa0931520 | 0.820206 | 7.751765e-53 | -8.615850e-47 |
| Msa0554740 | Msa0942080 | -0.845376 | 4.219957e-59 | -8.615850e-47 |
| Msa0554740 | Msa0953120 | 0.801737 | 7.817120e-49 | -8.615850e-47 |
| Msa0554740 | Msa0969520 | 0.822444 | 2.361399e-53 | -8.615850e-47 |
| Msa0554740 | Msa0969600 | 0.802142 | 6.455710e-49 | -8.615850e-47 |
| Msa0554740 | Msa0976670 | 0.829902 | 3.968969e-55 | -8.615850e-47 |
| Msa0554740 | Msa0993290 | 0.800027 | 1.747077e-48 | -8.615850e-47 |
| Msa0554740 | Msa0997450 | -0.816444 | 5.512271e-52 | -8.615850e-47 |
| Msa0554740 | Msa1014540 | 0.806242 | 9.047791e-50 | -8.615850e-47 |
| Msa0554740 | Msa1014990 | 0.817081 | 3.966692e-52 | -8.615850e-47 |
| Msa0554740 | Msa1019840 | -0.828118 | 1.073720e-54 | -8.615850e-47 |
| Msa0554740 | Msa1075220 | -0.837806 | 4.182670e-57 | -8.615850e-47 |
| Msa0554740 | Msa1078580 | -0.807312 | 5.375561e-50 | -8.615850e-47 |
| Msa0554740 | Msa1078750 | -0.804084 | 2.559859e-49 | -8.615850e-47 |
| Msa0554740 | Msa1081590 | 0.826685 | 2.368529e-54 | -8.615850e-47 |
| Msa0554740 | Msa1082500 | 0.822929 | 1.820793e-53 | -8.615850e-47 |
| Msa0554740 | Msa1082580 | 0.805620 | 1.222431e-49 | -8.615850e-47 |
| Msa0554740 | Msa1116130 | -0.829006 | 6.552344e-55 | -8.615850e-47 |
| Msa0554740 | Msa1131940 | -0.808911 | 2.453589e-50 | -8.615850e-47 |
| Msa0554740 | Msa1139000 | -0.831530 | 1.584419e-55 | -8.615850e-47 |
| Msa0554740 | Msa1162550 | -0.831958 | 1.242380e-55 | -8.615850e-47 |
| Msa0554740 | Msa1174040 | 0.823034 | 1.721383e-53 | -8.615850e-47 |
| Msa0554740 | Msa1205130 | 0.810876 | 9.269666e-51 | -8.615850e-47 |
| Msa0554740 | Msa1224480 | 0.807144 | 5.833250e-50 | -8.615850e-47 |
| Msa0554740 | Msa1225130 | 0.801435 | 9.015523e-49 | -8.615850e-47 |
| Msa0554740 | Msa1226660 | 0.814300 | 1.652785e-51 | -8.615850e-47 |
| Msa0554740 | Msa1229810 | 0.801487 | 8.797376e-49 | -8.615850e-47 |
| Msa0554740 | Msa1233890 | 0.834315 | 3.218386e-56 | -8.615850e-47 |
| Msa0554740 | Msa1244720 | -0.807118 | 5.908953e-50 | -8.615850e-47 |
| Msa0554740 | Msa1246510 | 0.804840 | 1.780773e-49 | -8.615850e-47 |
| Msa0554740 | Msa1247250 | 0.810362 | 1.197064e-50 | -8.615850e-47 |
| Msa0554740 | Msa1249490 | 0.832182 | 1.093527e-55 | -8.615850e-47 |
| Msa0554740 | Msa1253020 | 0.815276 | 1.004255e-51 | -8.615850e-47 |
| Msa0554740 | Msa1269940 | 0.817484 | 3.220273e-52 | -8.615850e-47 |
| Msa0554740 | Msa1284680 | 0.821023 | 5.031446e-53 | -8.615850e-47 |
| Msa0554740 | Msa1296940 | 0.820238 | 7.622736e-53 | -8.615850e-47 |
| Msa0554740 | Msa1319800 | 0.809343 | 1.983571e-50 | -8.615850e-47 |
| Msa0554740 | Msa1325860 | -0.828844 | 7.173596e-55 | -8.615850e-47 |
| Msa0554740 | Msa1342840 | 0.800222 | 1.595048e-48 | -8.615850e-47 |
| Msa0554740 | Msa1345380 | 0.830929 | 2.226089e-55 | -8.615850e-47 |
| Msa0554740 | Msa1348950 | 0.824157 | 9.399896e-54 | -8.615850e-47 |
| Msa0554740 | Msa1357530 | 0.814709 | 1.342102e-51 | -8.615850e-47 |
| Msa0554740 | Msa1362880 | 0.800562 | 1.359780e-48 | -8.615850e-47 |
| Msa0554740 | Msa1382160 | 0.852533 | 4.338139e-61 | -8.615850e-47 |
| Msa0554740 | Msa1393040 | 0.807098 | 5.967283e-50 | -8.615850e-47 |
| Msa0554740 | Msa1397860 | 0.802953 | 4.391786e-49 | -8.615850e-47 |
| Msa0554740 | Msa1403480 | 0.816265 | 6.044256e-52 | -8.615850e-47 |
| Msa0554740 | Msa1411020 | 0.851874 | 6.678072e-61 | -8.615850e-47 |
| Msa0554740 | Msa1416350 | 0.801283 | 9.687212e-49 | -8.615850e-47 |
| Msa0554740 | Msa1420290 | 0.834738 | 2.519755e-56 | -8.615850e-47 |
| Msa0554740 | Msa1420490 | 0.859840 | 3.130543e-63 | -8.615850e-47 |
| Msa0554740 | Msa1423390 | 0.858180 | 9.831615e-63 | -8.615850e-47 |
| Msa0554740 | Msa1424290 | 0.848943 | 4.439500e-60 | -8.615850e-47 |
| Msa0554740 | Msa1434350 | 0.853466 | 2.345824e-61 | -8.615850e-47 |
| Msa0554740 | Msa1439320 | 0.853576 | 2.181849e-61 | -8.615850e-47 |
| Msa0554740 | Msa1440370 | 0.856403 | 3.294125e-62 | -8.615850e-47 |
| Msa0554740 | Msa1440810 | 0.858030 | 1.089400e-62 | -8.615850e-47 |
| Msa0554740 | Msa1444740 | 0.824653 | 7.182126e-54 | -8.615850e-47 |
| Msa0554740 | Msa1451620 | -0.809078 | 2.260550e-50 | -8.615850e-47 |
| Msa0554740 | Msa1452240 | 0.843054 | 1.773461e-58 | -8.615850e-47 |
| Msa0554740 | Msa1453080 | 0.815375 | 9.547976e-52 | -8.615850e-47 |
| Msa0554740 | Msa1453560 | 0.809113 | 2.221574e-50 | -8.615850e-47 |
| Msa0554740 | Msa1459950 | 0.843025 | 1.805536e-58 | -8.615850e-47 |
| Msa0554740 | Msa1460050 | 0.825294 | 5.068939e-54 | -8.615850e-47 |
| Msa0554740 | Msa1460830 | 0.802607 | 5.178337e-49 | -8.615850e-47 |
| Msa0554740 | Msa1464940 | 0.847993 | 8.133744e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554740 | MtrunA17_Chr4g0003031 | 89.601 | 577 | 17 | 1 | 1 | 534 | 1 | 577 | 0.0 | 1003 |
| Msa0554740 | MtrunA17_Chr4g0064941 | 58.997 | 578 | 191 | 4 | 1 | 534 | 1 | 576 | 0.0 | 614 |
| Msa0554740 | MtrunA17_Chr8g0388071 | 29.176 | 425 | 243 | 12 | 89 | 458 | 61 | 482 | 4.06e-22 | 100 |
| Msa0554740 | MtrunA17_Chr8g0388071 | 25.791 | 411 | 267 | 9 | 144 | 521 | 67 | 472 | 1.48e-19 | 92.0 |
| Msa0554740 | MtrunA17_Chr4g0004901 | 27.198 | 489 | 276 | 20 | 83 | 507 | 170 | 642 | 1.76e-14 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554740 | AT1G15740.1 | 64.533 | 578 | 161 | 2 | 1 | 534 | 8 | 585 | 0.0 | 649 |
| Msa0554740 | AT4G23840.1 | 29.953 | 424 | 241 | 10 | 142 | 521 | 66 | 477 | 3.63e-25 | 110 |
Find 134 sgRNAs with CRISPR-Local
Find 656 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATGCTTGGATTCACTTTC+AGG | 0.068243 | 4_1:-52430380 | Msa0554740:intron |
| GTCACAGTAATTAAGATTTA+AGG | 0.141721 | 4_1:+52433455 | None:intergenic |
| ATCTCTGAAGTCTCTTAATT+TGG | 0.152359 | 4_1:-52427654 | Msa0554740:CDS |
| TGTAGTAAAGTCACTGATTT+TGG | 0.168024 | 4_1:-52431027 | Msa0554740:CDS |
| GCGTCTGATGTCACTGATTT+TGG | 0.168253 | 4_1:-52433513 | Msa0554740:CDS |
| GAAGCTTGCCCTCTTAAATT+TGG | 0.198047 | 4_1:-52430423 | Msa0554740:CDS |
| TTTCTTTAACAGGGTGAAAT+TGG | 0.215812 | 4_1:-52434586 | Msa0554740:intron |
| TTGTTAGTGACAGTGGTTTA+AGG | 0.217027 | 4_1:-52427694 | Msa0554740:CDS |
| GGCCGAAAGCTTACCAAGTT+TGG | 0.225156 | 4_1:+52425205 | None:intergenic |
| CTCACTGACCTTGATTTGTT+TGG | 0.245633 | 4_1:-52426908 | Msa0554740:CDS |
| TTAAGCAGGATTGACAAAAT+TGG | 0.248392 | 4_1:-52429067 | Msa0554740:intron |
| CTTCTCTGGTCTTGTTAACT+TGG | 0.285104 | 4_1:-52431879 | Msa0554740:CDS |
| CCAGTCCAGCATCAGTAATT+TGG | 0.287315 | 4_1:+52427624 | None:intergenic |
| TCCGATATGAAGCCTTTATC+AGG | 0.299738 | 4_1:-52431511 | Msa0554740:intron |
| ATGGATTTACGCTTACAAAA+TGG | 0.306434 | 4_1:-52434345 | Msa0554740:CDS |
| CATAGGCTAATATGACTTTA+TGG | 0.308638 | 4_1:-52425090 | Msa0554740:three_prime_UTR |
| AATGGCCTAGAGCATTTATC+AGG | 0.312464 | 4_1:-52428316 | Msa0554740:intron |
| TAACTTGGTCAAGTTGGATT+TGG | 0.325759 | 4_1:-52431864 | Msa0554740:CDS |
| TCGGCCAGAGTAGGTGGTTT+GGG | 0.327735 | 4_1:-52425188 | Msa0554740:exon |
| CCAGTCCATGATCTGAAATT+TGG | 0.332242 | 4_1:+52433433 | None:intergenic |
| GAGAGATGTCCTGGGATTCA+TGG | 0.355408 | 4_1:-52431842 | Msa0554740:CDS |
| ATGCGGGTGTTGATGATTCT+TGG | 0.356326 | 4_1:-52433587 | Msa0554740:CDS |
| TTTGCTGATGCAGGTTTGAC+TGG | 0.365454 | 4_1:-52426932 | Msa0554740:intron |
| GCCGAAAGCTTACCAAGTTT+GGG | 0.372680 | 4_1:+52425206 | None:intergenic |
| CGCTTCTTGTTGTAAGCAAA+TGG | 0.375086 | 4_1:+52435290 | None:intergenic |
| GATGGATGTCATCTCATCTC+AGG | 0.377784 | 4_1:-52433565 | Msa0554740:CDS |
| TCCCAAACTTGGTAAGCTTT+CGG | 0.381563 | 4_1:-52425207 | Msa0554740:CDS |
| TTCGGCCAGAGTAGGTGGTT+TGG | 0.385549 | 4_1:-52425189 | Msa0554740:exon |
| TTGGATTTGGAGAGATGTCC+TGG | 0.400413 | 4_1:-52431851 | Msa0554740:CDS |
| AACCTTGATTCATGTAAGAT+TGG | 0.403335 | 4_1:-52429036 | Msa0554740:CDS |
| TGAGACTTTGACAATCTTGA+AGG | 0.404945 | 4_1:+52433481 | None:intergenic |
| AGATGCAACAAACCTGATAA+AGG | 0.406288 | 4_1:+52431499 | None:intergenic |
| CCAAATTACTGATGCTGGAC+TGG | 0.409005 | 4_1:-52427624 | Msa0554740:CDS |
| TCTTGTAACATCTGCATGCT+TGG | 0.409080 | 4_1:-52430393 | Msa0554740:CDS |
| TCATTCTGCTAATTGTATGT+AGG | 0.423519 | 4_1:-52425008 | Msa0554740:three_prime_UTR |
| TCTTGTAGGATTGTCTAGTC+TGG | 0.424185 | 4_1:-52427741 | Msa0554740:intron |
| TATTTGCCAGGATCTATACT+TGG | 0.424458 | 4_1:-52433616 | Msa0554740:intron |
| TTTCTGACAGAGGGTGTGAT+AGG | 0.424800 | 4_1:-52429493 | Msa0554740:CDS |
| CAAGGAATGAGTGCCTTCTC+TGG | 0.429753 | 4_1:-52431893 | Msa0554740:CDS |
| GACACCCTTCCAAATTTAAG+AGG | 0.430139 | 4_1:+52430414 | None:intergenic |
| AATACTTGCATCACCTCTAC+TGG | 0.430709 | 4_1:-52425328 | Msa0554740:CDS |
| TGTGACCAAATTTCAGATCA+TGG | 0.438486 | 4_1:-52433438 | Msa0554740:CDS |
| ATTAATTCACCTCCCAAACT+TGG | 0.439940 | 4_1:-52425218 | Msa0554740:CDS |
| ACCTGATAAAGGCTTCATAT+CGG | 0.443237 | 4_1:+52431510 | None:intergenic |
| AGATTCAAGTTTGACAGTGC+AGG | 0.445204 | 4_1:+52429530 | None:intergenic |
| GACATGCTAGAAAAGCATAA+GGG | 0.461275 | 4_1:-52425130 | Msa0554740:three_prime_UTR |
| AAAGTTGAAAGTATTAAACT+TGG | 0.469983 | 4_1:-52429308 | Msa0554740:CDS |
| AAACTTGAGATCTCTGACGT+TGG | 0.470253 | 4_1:-52425281 | Msa0554740:CDS |
| AAAACTGTGGAGTTAATTGC+TGG | 0.470627 | 4_1:-52426180 | Msa0554740:intron |
| ATTCAAGAATCTGAGGTCCT+TGG | 0.471185 | 4_1:-52426304 | Msa0554740:CDS |
| GCTTACCAAATTACTGATGC+TGG | 0.472779 | 4_1:-52427629 | Msa0554740:CDS |
| AGAAAGATCTACCGAGAGTA+AGG | 0.473864 | 4_1:+52433536 | None:intergenic |
| TGACATGCTAGAAAAGCATA+AGG | 0.474238 | 4_1:-52425131 | Msa0554740:three_prime_UTR |
| TCTTGTTAACTTGGTCAAGT+TGG | 0.476241 | 4_1:-52431870 | Msa0554740:CDS |
| TCAAGGAAATATTGCAAATG+TGG | 0.478014 | 4_1:-52434408 | Msa0554740:CDS |
| TGCTTACAACAAGAAGCGTT+CGG | 0.478414 | 4_1:-52435285 | Msa0554740:five_prime_UTR |
| ATCACAGAACAGCAACCTTA+CGG | 0.480947 | 4_1:-52426205 | Msa0554740:CDS |
| GAATTGTCTGATACTGAAGT+TGG | 0.487539 | 4_1:-52428343 | Msa0554740:CDS |
| CAAGGAAATATTGCAAATGT+GGG | 0.488242 | 4_1:-52434407 | Msa0554740:CDS |
| GCGCTAGGATCACAGATGTT+GGG | 0.491382 | 4_1:-52426886 | Msa0554740:CDS |
| TTTGGTTATTGAATGGATGA+TGG | 0.494307 | 4_1:-52434548 | Msa0554740:five_prime_UTR |
| ACCTTGATTTGTTTGGCGCT+AGG | 0.494505 | 4_1:-52426901 | Msa0554740:CDS |
| TCATAAGCAATTGATCTGCT+TGG | 0.506112 | 4_1:-52428365 | Msa0554740:CDS |
| GGCGCTAGGATCACAGATGT+TGG | 0.508377 | 4_1:-52426887 | Msa0554740:CDS |
| TTCACTGTTGTTAGTGACAG+TGG | 0.508517 | 4_1:-52427701 | Msa0554740:CDS |
| CACCAATCTTACATGAATCA+AGG | 0.510275 | 4_1:+52429034 | None:intergenic |
| CGATGGGTGGTGCGTGTTCG+AGG | 0.511564 | 4_1:-52434473 | Msa0554740:CDS |
| AACGAGCCACGTCACATTCG+CGG | 0.514383 | 4_1:-52435410 | Msa0554740:five_prime_UTR |
| TGATGAAGGATTGGTGAACT+TGG | 0.515944 | 4_1:-52429013 | Msa0554740:CDS |
| GATTCAAGTTTGACAGTGCA+GGG | 0.517023 | 4_1:+52429531 | None:intergenic |
| CTTGCCCTCTTAAATTTGGA+AGG | 0.517960 | 4_1:-52430419 | Msa0554740:CDS |
| TCTGACGTTGGAGTCATGTA+AGG | 0.518356 | 4_1:-52425269 | Msa0554740:CDS |
| CATGGGAACACATACTTGCA+AGG | 0.524260 | 4_1:+52427597 | None:intergenic |
| GCAGCCCAAACCACCTACTC+TGG | 0.527496 | 4_1:+52425184 | None:intergenic |
| GCAAATGTGGGAGTTTGAAA+TGG | 0.528018 | 4_1:-52434395 | Msa0554740:CDS |
| TCCTAGCGCCAAACAAATCA+AGG | 0.529517 | 4_1:+52426900 | None:intergenic |
| TCATGTAAGATTGGTGATGA+AGG | 0.532453 | 4_1:-52429027 | Msa0554740:CDS |
| GAAGGATTGGTGAACTTGGC+AGG | 0.535990 | 4_1:-52429009 | Msa0554740:intron |
| ATTTGCCAGGATCTATACTT+GGG | 0.536030 | 4_1:-52433615 | Msa0554740:intron |
| TCAAACCTGATAAATGCTCT+AGG | 0.548354 | 4_1:+52428311 | None:intergenic |
| AACTGTTACCGTGACATGAT+CGG | 0.548392 | 4_1:+52435215 | None:intergenic |
| AATGAAGATGTTCTTACTAG+AGG | 0.549524 | 4_1:-52434435 | Msa0554740:CDS |
| GTGTTCGAGGAAGCAAGAGC+GGG | 0.549694 | 4_1:-52434460 | Msa0554740:CDS |
| AAGCTTTCGGCCAGAGTAGG+TGG | 0.552258 | 4_1:-52425194 | Msa0554740:exon |
| AATTTCAGGGCTCACCGCGT+TGG | 0.556274 | 4_1:-52425368 | Msa0554740:intron |
| AAGTTGAAAGTATTAAACTT+GGG | 0.557845 | 4_1:-52429307 | Msa0554740:CDS |
| TGGACAATGTCCGTCACTGT+TGG | 0.557874 | 4_1:-52434325 | Msa0554740:CDS |
| GCATGTTTAGCTCATTTGAA+AGG | 0.558223 | 4_1:-52429265 | Msa0554740:intron |
| ATGGGAACACATACTTGCAA+GGG | 0.563020 | 4_1:+52427598 | None:intergenic |
| CAAGTTAACAAGACCAGAGA+AGG | 0.565092 | 4_1:+52431880 | None:intergenic |
| TAAGATTGGTGATGAAGGAT+TGG | 0.567788 | 4_1:-52429022 | Msa0554740:CDS |
| GGTTATTGAATGGATGATGG+TGG | 0.571252 | 4_1:-52434545 | Msa0554740:five_prime_UTR |
| GTAATAAGAGTGGCGTGAAG+TGG | 0.572085 | 4_1:+52435361 | None:intergenic |
| AGCGGTGGATTGACTGATGC+TGG | 0.575698 | 4_1:-52426273 | Msa0554740:CDS |
| TTGCCCTCTTAAATTTGGAA+GGG | 0.576199 | 4_1:-52430418 | Msa0554740:CDS |
| AACTTGGGATTTAATGACAT+AGG | 0.577016 | 4_1:-52429292 | Msa0554740:CDS |
| TCAGGGTTCATCCTTACTCT+CGG | 0.578819 | 4_1:-52433547 | Msa0554740:CDS |
| AATGATTCAATATCTGCTCA+AGG | 0.581564 | 4_1:-52431911 | Msa0554740:CDS |
| GGTAAGCTTTCGGCCAGAGT+AGG | 0.582469 | 4_1:-52425197 | Msa0554740:exon |
| CCAAATTTCAGATCATGGAC+TGG | 0.582601 | 4_1:-52433433 | Msa0554740:CDS |
| CTATACTTGGGAGAATATGC+GGG | 0.584538 | 4_1:-52433603 | Msa0554740:CDS |
| AAACAGAATTCAAGAATCTG+AGG | 0.586780 | 4_1:-52426311 | Msa0554740:intron |
| CAAATGCTGCAGTCCAGTAG+AGG | 0.586938 | 4_1:+52425315 | None:intergenic |
| GGCTAATATGACTTTATGGA+AGG | 0.587470 | 4_1:-52425086 | Msa0554740:three_prime_UTR |
| ATGGATGTCATCTCATCTCA+GGG | 0.587599 | 4_1:-52433564 | Msa0554740:CDS |
| GATGTAAAAGAATGATGTAA+AGG | 0.588609 | 4_1:-52424961 | Msa0554740:three_prime_UTR |
| ACAGTGCCTCCATGAATCCC+AGG | 0.590376 | 4_1:+52431833 | None:intergenic |
| TGGATTTGGAGAGATGTCCT+GGG | 0.594319 | 4_1:-52431850 | Msa0554740:CDS |
| TCTATACTTGGGAGAATATG+CGG | 0.596739 | 4_1:-52433604 | Msa0554740:CDS |
| GACAATCTTAAAATGTACAT+AGG | 0.601091 | 4_1:-52425107 | Msa0554740:three_prime_UTR |
| CGTGTTCGAGGAAGCAAGAG+CGG | 0.602614 | 4_1:-52434461 | Msa0554740:CDS |
| ACACCCTTCCAAATTTAAGA+GGG | 0.605875 | 4_1:+52430415 | None:intergenic |
| GATGCAATATTTCTGACAGA+GGG | 0.606799 | 4_1:-52429502 | Msa0554740:CDS |
| TGTAAGCGTAAATCCATGGA+CGG | 0.611321 | 4_1:+52434351 | None:intergenic |
| TGGAATCTCTCAATATGAAG+TGG | 0.616270 | 4_1:-52431552 | Msa0554740:CDS |
| ACATGCTAGAAAAGCATAAG+GGG | 0.618053 | 4_1:-52425129 | Msa0554740:three_prime_UTR |
| TCCACCGCTGCATATTTCCA+AGG | 0.622364 | 4_1:+52426287 | None:intergenic |
| CAACTTCACCGATCATGTCA+CGG | 0.627426 | 4_1:-52435223 | Msa0554740:intron |
| CATGGACTGGAGTGTATCAG+TGG | 0.628538 | 4_1:-52433420 | Msa0554740:intron |
| GATACTGAAGTTGGAAACAA+TGG | 0.628892 | 4_1:-52428334 | Msa0554740:CDS |
| AATGTGGGAGTTTGAAATGG+TGG | 0.629760 | 4_1:-52434392 | Msa0554740:CDS |
| TCCTTGGAAATATGCAGCGG+TGG | 0.643300 | 4_1:-52426288 | Msa0554740:CDS |
| ACACACAAGTCCAACAGTGA+CGG | 0.643962 | 4_1:+52434315 | None:intergenic |
| ACTGTCACTAACAACAGTGA+AGG | 0.649551 | 4_1:+52427703 | None:intergenic |
| GGGTGTTGATGATTCTTGGA+TGG | 0.654279 | 4_1:-52433583 | Msa0554740:CDS |
| AGATGCAATATTTCTGACAG+AGG | 0.657280 | 4_1:-52429503 | Msa0554740:CDS |
| GAAAGCTTACCAAGTTTGGG+AGG | 0.672757 | 4_1:+52425209 | None:intergenic |
| CAACCTTACGGACAAAACTG+TGG | 0.677276 | 4_1:-52426193 | Msa0554740:CDS |
| GTGTGTCCAGAAAATAAGTG+AGG | 0.686168 | 4_1:-52434298 | Msa0554740:intron |
| AGGTCCTTGGAAATATGCAG+CGG | 0.704864 | 4_1:-52426291 | Msa0554740:CDS |
| AGATGTCCTGGGATTCATGG+AGG | 0.711361 | 4_1:-52431839 | Msa0554740:CDS |
| AGTGGTTTAAGGAAATTGTG+TGG | 0.713167 | 4_1:-52427683 | Msa0554740:CDS |
| CAAACAAATCAAGGTCAGTG+AGG | 0.728596 | 4_1:+52426909 | None:intergenic |
| AAGATTCAAAGAAACCAACG+CGG | 0.845026 | 4_1:+52425354 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAAAAAAAAAAAAAAAA+AGG | + | chr4_1:52432449-52432468 | None:intergenic | 0.0% |
| !!! | TGAAATTAATTTGTAAATTT+TGG | - | chr4_1:52425372-52425391 | Msa0554740:intron | 10.0% |
| !!! | TAATATTTAATTTTTTTTCC+AGG | + | chr4_1:52426458-52426477 | None:intergenic | 10.0% |
| !!! | TGATTTTATATTAATTTTGA+AGG | + | chr4_1:52435399-52435418 | None:intergenic | 10.0% |
| !!! | TTATGTTACTTTTTTATTCT+CGG | - | chr4_1:52425318-52425337 | Msa0554740:CDS | 15.0% |
| !! | TTAAGAGTTATTATTATGTT+CGG | - | chr4_1:52425456-52425475 | Msa0554740:intron | 15.0% |
| !! | ATATCTTATGAAATTGATTA+TGG | + | chr4_1:52425618-52425637 | None:intergenic | 15.0% |
| !!! | ATAATCTTTTTTTCTTTAAC+AGG | - | chr4_1:52425725-52425744 | Msa0554740:intron | 15.0% |
| !!! | TAATCTTTTTTTCTTTAACA+GGG | - | chr4_1:52425726-52425745 | Msa0554740:intron | 15.0% |
| !!! | TCAGCAAATTTTAAATAATT+TGG | - | chr4_1:52426175-52426194 | Msa0554740:intron | 15.0% |
| !!! | ATTTTAAAGGTATATTATCA+AGG | + | chr4_1:52427109-52427128 | None:intergenic | 15.0% |
| !!! | TTTTCCAAGATTTTTTTTAA+AGG | + | chr4_1:52427207-52427226 | None:intergenic | 15.0% |
| !! | TCAAATATCAAATGTAATAA+AGG | + | chr4_1:52427258-52427277 | None:intergenic | 15.0% |
| !! | TGTTAAAATATTTCCAAATT+GGG | + | chr4_1:52427867-52427886 | None:intergenic | 15.0% |
| !! | TTGTTAAAATATTTCCAAAT+TGG | + | chr4_1:52427868-52427887 | None:intergenic | 15.0% |
| !!! | TACTTAATTTTTCAGTAATA+TGG | - | chr4_1:52427950-52427969 | Msa0554740:intron | 15.0% |
| !! | TAAATTAGAACAAAGTTTAA+AGG | + | chr4_1:52428024-52428043 | None:intergenic | 15.0% |
| !! | ATTATGTTAAATTGGATTAA+TGG | + | chr4_1:52428150-52428169 | None:intergenic | 15.0% |
| !! | ATTCTTAGAAAATATTACTA+AGG | - | chr4_1:52429727-52429746 | Msa0554740:intron | 15.0% |
| !! | AACTTAAGTAAGAAAAATAT+CGG | - | chr4_1:52430226-52430245 | Msa0554740:intron | 15.0% |
| !!! | TTCATTTAAATTAGTTTTCT+CGG | - | chr4_1:52430301-52430320 | Msa0554740:intron | 15.0% |
| !!! | AAAATTTTGTTTCCAATATT+GGG | - | chr4_1:52430371-52430390 | Msa0554740:intron | 15.0% |
| !! | TAATGCTAATAAAAAAGAAA+AGG | + | chr4_1:52430427-52430446 | None:intergenic | 15.0% |
| !! | GTATAATTACATAATTTACA+GGG | - | chr4_1:52430895-52430914 | Msa0554740:intron | 15.0% |
| !! | AAAATAGAAATTGATAGATT+AGG | - | chr4_1:52431402-52431421 | Msa0554740:intron | 15.0% |
| !! | TTAAAAAAAAAAATGTAAGC+TGG | - | chr4_1:52431813-52431832 | Msa0554740:intron | 15.0% |
| !!! | AATCTAAAGAATGATTTTAT+TGG | - | chr4_1:52431881-52431900 | Msa0554740:CDS | 15.0% |
| !!! | TTTTATATTCTATTTCTTGT+AGG | - | chr4_1:52432462-52432481 | Msa0554740:intron | 15.0% |
| !!! | TTATATATTCTATTTCTTGT+AGG | - | chr4_1:52432566-52432585 | Msa0554740:intron | 15.0% |
| !! | TTGAATTGTAAATATTTCAT+GGG | + | chr4_1:52432744-52432763 | None:intergenic | 15.0% |
| !! | TTTGAATTGTAAATATTTCA+TGG | + | chr4_1:52432745-52432764 | None:intergenic | 15.0% |
| !! | AATATTTACAATTCAAAGAA+TGG | - | chr4_1:52432748-52432767 | Msa0554740:intron | 15.0% |
| !! | AAAAAAATATGAAAAGAATG+TGG | - | chr4_1:52433149-52433168 | Msa0554740:intron | 15.0% |
| !! | ACAATTATTAAGATTGAATT+TGG | + | chr4_1:52433884-52433903 | None:intergenic | 15.0% |
| !! | AAATTCAATCTTAATAATTG+TGG | - | chr4_1:52433883-52433902 | Msa0554740:intron | 15.0% |
| !!! | TATATATACTTTTAAGCTAT+TGG | + | chr4_1:52434790-52434809 | None:intergenic | 15.0% |
| !!! | TAGCTTAAAAGTATATATAT+AGG | - | chr4_1:52434791-52434810 | Msa0554740:intron | 15.0% |
| !! | AAAAATACCAATAAAATGTA+GGG | + | chr4_1:52434847-52434866 | None:intergenic | 15.0% |
| !! | AAGAAAAATTGTAATAAGAG+TGG | + | chr4_1:52424973-52424992 | None:intergenic | 20.0% |
| !!! | ATTCATTTTTGGTTATTGAA+TGG | - | chr4_1:52425766-52425785 | Msa0554740:intron | 20.0% |
| !! | GAATAAAATATACAACAAAG+AGG | + | chr4_1:52427014-52427033 | None:intergenic | 20.0% |
| !!! | GTATGCTAGATTAATTTTAA+AGG | + | chr4_1:52427122-52427141 | None:intergenic | 20.0% |
| !!! | GATACCTTTAAAAAAAATCT+TGG | - | chr4_1:52427200-52427219 | Msa0554740:intron | 20.0% |
| !! | TTTAGATATTTATCCATTGT+TGG | - | chr4_1:52427915-52427934 | Msa0554740:intron | 20.0% |
| !! | CTGAAAAATTAAGTAGAAAT+AGG | + | chr4_1:52427945-52427964 | None:intergenic | 20.0% |
| !! | GAGATTTCATTATGTTAAAT+TGG | + | chr4_1:52428158-52428177 | None:intergenic | 20.0% |
| !! | TATATGTAATGTAATATTCC+AGG | - | chr4_1:52428353-52428372 | Msa0554740:CDS | 20.0% |
| !!! | AAACTTTTTTGTTTACACAA+AGG | + | chr4_1:52428542-52428561 | None:intergenic | 20.0% |
| !!! | AGTTATGAAGAAATCAATTT+TGG | + | chr4_1:52428706-52428725 | None:intergenic | 20.0% |
| !! | ATAACTTCAATCAAACTATT+TGG | - | chr4_1:52428720-52428739 | Msa0554740:intron | 20.0% |
| !! | ACTTAAGTAAGAAAAATATC+GGG | - | chr4_1:52430227-52430246 | Msa0554740:intron | 20.0% |
| !!! | TCATTTAAATTAGTTTTCTC+GGG | - | chr4_1:52430302-52430321 | Msa0554740:intron | 20.0% |
| !!! | CAATATTGGAAACAAAATTT+TGG | + | chr4_1:52430372-52430391 | None:intergenic | 20.0% |
| !!! | CAAAATTTTGTTTCCAATAT+TGG | - | chr4_1:52430370-52430389 | Msa0554740:intron | 20.0% |
| !!! | AAATTTTGTTTCCAATATTG+GGG | - | chr4_1:52430372-52430391 | Msa0554740:intron | 20.0% |
| !! | TATTAAATCAAAACTCCAAT+GGG | + | chr4_1:52430747-52430766 | None:intergenic | 20.0% |
| !! | ATATTAAATCAAAACTCCAA+TGG | + | chr4_1:52430748-52430767 | None:intergenic | 20.0% |
| !! | GGTATAATTACATAATTTAC+AGG | - | chr4_1:52430894-52430913 | Msa0554740:intron | 20.0% |
| !!! | AAAGTTGAAAGTATTAAACT+TGG | - | chr4_1:52431013-52431032 | Msa0554740:CDS | 20.0% |
| !!! | AAGTTGAAAGTATTAAACTT+GGG | - | chr4_1:52431014-52431033 | Msa0554740:CDS | 20.0% |
| !! | ATAGGAATTGTATTTGAAAA+TGG | - | chr4_1:52431200-52431219 | Msa0554740:intron | 20.0% |
| !!! | ACTTATGTATATTTTTAAGC+AGG | - | chr4_1:52431240-52431259 | Msa0554740:intron | 20.0% |
| !! | TAGAAAGCAATATAGAAATA+CGG | - | chr4_1:52431511-52431530 | Msa0554740:intron | 20.0% |
| !! | AAGAAAGAAATTTATTGTCT+GGG | + | chr4_1:52431649-52431668 | None:intergenic | 20.0% |
| !! | AAAGAAAGAAATTTATTGTC+TGG | + | chr4_1:52431650-52431669 | None:intergenic | 20.0% |
| !! | ATACATTATGTTTGGATTAA+TGG | + | chr4_1:52431758-52431777 | None:intergenic | 20.0% |
| !! | TTAATCCAAACATAATGTAT+TGG | - | chr4_1:52431758-52431777 | Msa0554740:intron | 20.0% |
| !!! | TCCTTTTCTTTTTTTTTGAA+TGG | - | chr4_1:52432816-52432835 | Msa0554740:intron | 20.0% |
| !!! | TAAATATTTACTTCCTTTTC+CGG | - | chr4_1:52432864-52432883 | Msa0554740:intron | 20.0% |
| !!! | AGGTATAAAATCATATTTTC+AGG | - | chr4_1:52433010-52433029 | Msa0554740:intron | 20.0% |
| !! | TATAAAATTACCTGTGTAAT+AGG | + | chr4_1:52433054-52433073 | None:intergenic | 20.0% |
| !!! | AAACAATTTATGAGTTTGTT+TGG | - | chr4_1:52433081-52433100 | Msa0554740:intron | 20.0% |
| !! | AAATTCAAATAATTTATCCC+AGG | + | chr4_1:52433300-52433319 | None:intergenic | 20.0% |
| !! | AGCAAACAAAAATAAGTAAA+AGG | + | chr4_1:52433570-52433589 | None:intergenic | 20.0% |
| !! | ATAAAAAAGCTGAAATATGT+TGG | - | chr4_1:52433595-52433614 | Msa0554740:CDS | 20.0% |
| !!! | AATGTGAAAAAGAAGTTTTA+GGG | - | chr4_1:52434263-52434282 | Msa0554740:intron | 20.0% |
| !!! | TTAATTGATGATTTTCGTTA+AGG | - | chr4_1:52434305-52434324 | Msa0554740:CDS | 20.0% |
| !! | ATAGATTCATTCAAATTAGT+CGG | - | chr4_1:52434389-52434408 | Msa0554740:CDS | 20.0% |
| !!! | ATTTCTTATTCTTTAGGAAA+AGG | - | chr4_1:52434703-52434722 | Msa0554740:intron | 20.0% |
| !!! | TTTCTTATTCTTTAGGAAAA+GGG | - | chr4_1:52434704-52434723 | Msa0554740:intron | 20.0% |
| !! | AAAATACCAATAAAATGTAG+GGG | + | chr4_1:52434846-52434865 | None:intergenic | 20.0% |
| !! | GAAAAATACCAATAAAATGT+AGG | + | chr4_1:52434848-52434867 | None:intergenic | 20.0% |
| ! | AAAGAAAAAAGCTAAAACAC+CGG | + | chr4_1:52425184-52425203 | None:intergenic | 25.0% |
| !!! | TTAGCTTTTTTCTTTCTATG+TGG | - | chr4_1:52425189-52425208 | Msa0554740:exon | 25.0% |
| !!! | TTTAAATTTTGGAGTTTCTG+TGG | - | chr4_1:52425293-52425312 | Msa0554740:CDS | 25.0% |
| !! | TGGTTTCATGTATTCATTTT+TGG | - | chr4_1:52425755-52425774 | Msa0554740:intron | 25.0% |
| !! | TTACTAGAATATTTTGTCGA+TGG | - | chr4_1:52425831-52425850 | Msa0554740:intron | 25.0% |
| !! | TACTAGAATATTTTGTCGAT+GGG | - | chr4_1:52425832-52425851 | Msa0554740:intron | 25.0% |
| !! | TTTTTCCAGGTATTATGATA+GGG | + | chr4_1:52426445-52426464 | None:intergenic | 25.0% |
| !!! | TTTTTTCCAGGTATTATGAT+AGG | + | chr4_1:52426446-52426465 | None:intergenic | 25.0% |
| ! | GTAGTGTTTGGTAAAATTAA+TGG | + | chr4_1:52426531-52426550 | None:intergenic | 25.0% |
| ! | CTTATTGAATTTGTAGTGTT+TGG | + | chr4_1:52426543-52426562 | None:intergenic | 25.0% |
| ! | GTCACAGTAATTAAGATTTA+AGG | + | chr4_1:52426869-52426888 | None:intergenic | 25.0% |
| !! | CAATGGTATTTGTGTATTTT+AGG | + | chr4_1:52427526-52427545 | None:intergenic | 25.0% |
| ! | ATTGTACTTGCAAAAAAGTA+CGG | + | chr4_1:52427679-52427698 | None:intergenic | 25.0% |
| ! | GTACAATATTATTATGCACT+TGG | - | chr4_1:52427692-52427711 | Msa0554740:CDS | 25.0% |
| ! | TTGTTGTATCACCAATTATT+TGG | - | chr4_1:52427829-52427848 | Msa0554740:intron | 25.0% |
| ! | TGTTGTATCACCAATTATTT+GGG | - | chr4_1:52427830-52427849 | Msa0554740:intron | 25.0% |
| ! | AATTAACCATCCCAAATAAT+TGG | + | chr4_1:52427843-52427862 | None:intergenic | 25.0% |
| ! | ATCTGCATAAGATTTCAATA+TGG | + | chr4_1:52427983-52428002 | None:intergenic | 25.0% |
| !!! | TTATTTTTCCATTATCACGA+AGG | - | chr4_1:52428102-52428121 | Msa0554740:intron | 25.0% |
| !! | GTTAAATTGGATTAATGGAT+GGG | + | chr4_1:52428145-52428164 | None:intergenic | 25.0% |
| ! | TGTTAAATTGGATTAATGGA+TGG | + | chr4_1:52428146-52428165 | None:intergenic | 25.0% |
| ! | ATAATGAAATCTCCATAGTA+AGG | - | chr4_1:52428165-52428184 | Msa0554740:intron | 25.0% |
| ! | AAAACTATTTCACCTTACTA+TGG | + | chr4_1:52428180-52428199 | None:intergenic | 25.0% |
| ! | ACATTCAATGAATAACATTG+AGG | - | chr4_1:52428203-52428222 | Msa0554740:intron | 25.0% |
| ! | AACAATGCTATGTAACAAAA+AGG | + | chr4_1:52428251-52428270 | None:intergenic | 25.0% |
| ! | TTTGAAGGTTGTATAATAAC+TGG | + | chr4_1:52428600-52428619 | None:intergenic | 25.0% |
| !!! | CTATTTGGTTCATATTTTTC+AGG | - | chr4_1:52428735-52428754 | Msa0554740:intron | 25.0% |
| ! | AAGAAGACAATAACCTAAAT+AGG | + | chr4_1:52428945-52428964 | None:intergenic | 25.0% |
| !! | ATTGTCTTACACTAGTTTAT+AGG | - | chr4_1:52429389-52429408 | Msa0554740:intron | 25.0% |
| !!! | ATGTTTAGCTTGAAACAAAA+AGG | - | chr4_1:52429480-52429499 | Msa0554740:intron | 25.0% |
| ! | ATAGGCTTAAAATTCTATGA+AGG | + | chr4_1:52429974-52429993 | None:intergenic | 25.0% |
| !! | ATAGAATTTTAAGCCTATTC+TGG | - | chr4_1:52429976-52429995 | Msa0554740:intron | 25.0% |
| ! | CATAACAAAATAACCAGAAT+AGG | + | chr4_1:52429992-52430011 | None:intergenic | 25.0% |
| ! | AATTGCACTAAATTCTTGTT+AGG | - | chr4_1:52430027-52430046 | Msa0554740:intron | 25.0% |
| !!! | TTTTTTTTTCCTTTCTTCAC+TGG | - | chr4_1:52430105-52430124 | Msa0554740:intron | 25.0% |
| ! | CTTAAGTAAGAAAAATATCG+GGG | - | chr4_1:52430228-52430247 | Msa0554740:intron | 25.0% |
| ! | TTAAGTAAGAAAAATATCGG+GGG | - | chr4_1:52430229-52430248 | Msa0554740:intron | 25.0% |
| ! | TTGTCATAGAAATATTTGTG+TGG | - | chr4_1:52430265-52430284 | Msa0554740:intron | 25.0% |
| ! | AATACTGTATGGACAATATT+GGG | + | chr4_1:52430402-52430421 | None:intergenic | 25.0% |
| ! | TAATACTGTATGGACAATAT+TGG | + | chr4_1:52430403-52430422 | None:intergenic | 25.0% |
| ! | AAGAAAAGGTTAATACTGTA+TGG | + | chr4_1:52430413-52430432 | None:intergenic | 25.0% |
| ! | TGGCATATAATAACTTAATG+AGG | - | chr4_1:52430713-52430732 | Msa0554740:intron | 25.0% |
| !!! | ATTCTAAAGCTAATTCTTTC+AGG | - | chr4_1:52430872-52430891 | Msa0554740:intron | 25.0% |
| !!! | TTCTAAAGCTAATTCTTTCA+GGG | - | chr4_1:52430873-52430892 | Msa0554740:intron | 25.0% |
| ! | ACAAACTACTGGTAAAATAA+CGG | - | chr4_1:52431141-52431160 | Msa0554740:intron | 25.0% |
| ! | GAAGAAATAGGAATAGAAAT+GGG | + | chr4_1:52431724-52431743 | None:intergenic | 25.0% |
| !!! | ATGTTTGGATTAATGGATTT+GGG | + | chr4_1:52431751-52431770 | None:intergenic | 25.0% |
| !!! | TATGTTTGGATTAATGGATT+TGG | + | chr4_1:52431752-52431771 | None:intergenic | 25.0% |
| !!! | TTTCTGATCATTTTTCCTAT+TGG | - | chr4_1:52432161-52432180 | Msa0554740:intron | 25.0% |
| !!! | TTCTGATCATTTTTCCTATT+GGG | - | chr4_1:52432162-52432181 | Msa0554740:intron | 25.0% |
| ! | CTTGTGATTATAAAGTAACA+AGG | + | chr4_1:52432271-52432290 | None:intergenic | 25.0% |
| ! | CATAAACTAATCTCTTGAAA+TGG | - | chr4_1:52432304-52432323 | Msa0554740:intron | 25.0% |
| ! | GCCATTCAAAAAAAAAGAAA+AGG | + | chr4_1:52432820-52432839 | None:intergenic | 25.0% |
| !! | AAATATTTACTTCCTTTTCC+GGG | - | chr4_1:52432865-52432884 | Msa0554740:intron | 25.0% |
| !! | ATGATTTTATACCTTGAAAC+AGG | + | chr4_1:52433004-52433023 | None:intergenic | 25.0% |
| !! | TATTTGAAAAGTATGCAACA+TGG | - | chr4_1:52433464-52433483 | Msa0554740:CDS | 25.0% |
| !! | ACATATTGACTACATTTATG+TGG | - | chr4_1:52433526-52433545 | Msa0554740:CDS | 25.0% |
| ! | AAAATAAGTAAAAGGCCAAA+CGG | + | chr4_1:52433562-52433581 | None:intergenic | 25.0% |
| !!! | ATTAATGGTTTTACATGAGA+CGG | + | chr4_1:52433803-52433822 | None:intergenic | 25.0% |
| !!! | GCAGTTAATTTTAAAGAACT+TGG | + | chr4_1:52433913-52433932 | None:intergenic | 25.0% |
| !! | TTAATTGCTGGTAATTTTGT+GGG | - | chr4_1:52434153-52434172 | Msa0554740:intron | 25.0% |
| !! | GAATGTGAAAAAGAAGTTTT+AGG | - | chr4_1:52434262-52434281 | Msa0554740:intron | 25.0% |
| ! | TAGATTCATTCAAATTAGTC+GGG | - | chr4_1:52434390-52434409 | Msa0554740:CDS | 25.0% |
| !! | TTTTAACAACTCAGCTAAAA+CGG | + | chr4_1:52434610-52434629 | None:intergenic | 25.0% |
| !! | TGTTAAAAGTTTAGTTTCTC+CGG | - | chr4_1:52434622-52434641 | Msa0554740:intron | 25.0% |
| ! | ATGTAAGTGTAACATTGAAT+GGG | + | chr4_1:52434668-52434687 | None:intergenic | 25.0% |
| ! | AATGTAAGTGTAACATTGAA+TGG | + | chr4_1:52434669-52434688 | None:intergenic | 25.0% |
| ! | GTAGACATTTCTTATTCTTT+AGG | - | chr4_1:52434697-52434716 | Msa0554740:intron | 25.0% |
| !! | TTCTTATTCTTTAGGAAAAG+GGG | - | chr4_1:52434705-52434724 | Msa0554740:intron | 25.0% |
| !! | TACTTTTAAGCTATTGGAAA+TGG | + | chr4_1:52434784-52434803 | None:intergenic | 25.0% |
| !! | AAAAGTATATATATAGGTCC+TGG | - | chr4_1:52434797-52434816 | Msa0554740:intron | 25.0% |
| !! | AAATTTCCCCTACATTTTAT+TGG | - | chr4_1:52434837-52434856 | Msa0554740:intron | 25.0% |
| ! | GACAATCTTAAAATGTACAT+AGG | - | chr4_1:52435214-52435233 | Msa0554740:intron | 25.0% |
| ! | GATGTAAAAGAATGATGTAA+AGG | - | chr4_1:52435360-52435379 | Msa0554740:five_prime_UTR | 25.0% |
| !!! | GGATTATCCTGATTTTTTTC+CGG | - | chr4_1:52425162-52425181 | Msa0554740:three_prime_UTR | 30.0% |
| TAAAACACCGGAAAAAAATC+AGG | + | chr4_1:52425172-52425191 | None:intergenic | 30.0% | |
| !!! | TGTAAATTTTGGAGTCTATG+TGG | - | chr4_1:52425383-52425402 | Msa0554740:intron | 30.0% |
| TTATGGTTCATCTTACTAAG+AGG | + | chr4_1:52425601-52425620 | None:intergenic | 30.0% | |
| TTTCTTTAACAGGGTGAAAT+TGG | - | chr4_1:52425735-52425754 | Msa0554740:intron | 30.0% | |
| TTTGGTTATTGAATGGATGA+TGG | - | chr4_1:52425773-52425792 | Msa0554740:intron | 30.0% | |
| AATGAAGATGTTCTTACTAG+AGG | - | chr4_1:52425886-52425905 | Msa0554740:intron | 30.0% | |
| ! | TTCTTACTAGAGGATTTTCA+AGG | - | chr4_1:52425896-52425915 | Msa0554740:intron | 30.0% |
| TCAAGGAAATATTGCAAATG+TGG | - | chr4_1:52425913-52425932 | Msa0554740:intron | 30.0% | |
| CAAGGAAATATTGCAAATGT+GGG | - | chr4_1:52425914-52425933 | Msa0554740:intron | 30.0% | |
| ! | ATTTTGTAAGCGTAAATCCA+TGG | + | chr4_1:52425977-52425996 | None:intergenic | 30.0% |
| ATGGATTTACGCTTACAAAA+TGG | - | chr4_1:52425976-52425995 | Msa0554740:intron | 30.0% | |
| !! | ACAATACCTCACTTATTTTC+TGG | + | chr4_1:52426032-52426051 | None:intergenic | 30.0% |
| TAAATCATATAGGCTCTGTT+TGG | - | chr4_1:52426258-52426277 | Msa0554740:CDS | 30.0% | |
| TAAGTCATACACTCAAAATG+TGG | + | chr4_1:52426289-52426308 | None:intergenic | 30.0% | |
| ATGACAAAAAAAGACTCGTT+TGG | - | chr4_1:52426325-52426344 | Msa0554740:intron | 30.0% | |
| ! | TTTTCCAGGTATTATGATAG+GGG | + | chr4_1:52426444-52426463 | None:intergenic | 30.0% |
| TCATATATCTTCGATCTAAG+TGG | - | chr4_1:52426668-52426687 | Msa0554740:intron | 30.0% | |
| !! | AGTTTTATCTCTTATTTGCC+AGG | - | chr4_1:52426693-52426712 | Msa0554740:intron | 30.0% |
| CATAACAAAGACAAAATTGC+AGG | + | chr4_1:52426940-52426959 | None:intergenic | 30.0% | |
| ! | CTGCAATTTTGTCTTTGTTA+TGG | - | chr4_1:52426938-52426957 | Msa0554740:intron | 30.0% |
| ACCGTCATAATATTCCTAAA+AGG | - | chr4_1:52427379-52427398 | Msa0554740:intron | 30.0% | |
| !! | GCCTTTTAGGAATATTATGA+CGG | + | chr4_1:52427383-52427402 | None:intergenic | 30.0% |
| !! | TGGTATTTGTGTATTTTAGG+CGG | + | chr4_1:52427523-52427542 | None:intergenic | 30.0% |
| GGGTTTAATATCGTATTCTA+GGG | + | chr4_1:52427644-52427663 | None:intergenic | 30.0% | |
| AGGGTTTAATATCGTATTCT+AGG | + | chr4_1:52427645-52427664 | None:intergenic | 30.0% | |
| CACTTGGATTTAGAAGTAAT+TGG | - | chr4_1:52427708-52427727 | Msa0554740:CDS | 30.0% | |
| AAAATAGAGAAAACTACGTG+AGG | + | chr4_1:52427896-52427915 | None:intergenic | 30.0% | |
| CTATCCAGAATTTCATTCTT+CGG | + | chr4_1:52428068-52428087 | None:intergenic | 30.0% | |
| AATGATTCAATATCTGCTCA+AGG | - | chr4_1:52428410-52428429 | Msa0554740:intron | 30.0% | |
| TGAAGTTCATCAAAGAACAT+TGG | + | chr4_1:52428571-52428590 | None:intergenic | 30.0% | |
| TTGTCTGAATAGTAAAGCTT+TGG | - | chr4_1:52428640-52428659 | Msa0554740:intron | 30.0% | |
| TGTCTGAATAGTAAAGCTTT+GGG | - | chr4_1:52428641-52428660 | Msa0554740:intron | 30.0% | |
| !!! | TTTTTCAGGTCTAACTAAGT+TGG | - | chr4_1:52428749-52428768 | Msa0554740:intron | 30.0% |
| !! | ACAAAGCATTGGTAAATTTC+TGG | + | chr4_1:52428871-52428890 | None:intergenic | 30.0% |
| AAATCTCGAAAACAAAGCAT+TGG | + | chr4_1:52428882-52428901 | None:intergenic | 30.0% | |
| ! | GAGATTTTCTTCTATGATGT+TGG | - | chr4_1:52428895-52428914 | Msa0554740:intron | 30.0% |
| AAATAGGAACTATTCAGTAG+TGG | + | chr4_1:52428929-52428948 | None:intergenic | 30.0% | |
| CTACTGAATAGTTCCTATTT+AGG | - | chr4_1:52428929-52428948 | Msa0554740:intron | 30.0% | |
| TTGTCATCTTCTTAGACATA+TGG | - | chr4_1:52429113-52429132 | Msa0554740:intron | 30.0% | |
| !!! | TGTAGTAAAGTCACTGATTT+TGG | - | chr4_1:52429294-52429313 | Msa0554740:CDS | 30.0% |
| AGATAGTTCAGTTGAAGATT+CGG | + | chr4_1:52429513-52429532 | None:intergenic | 30.0% | |
| ! | GATATTTCGAATTTGCTTTC+TGG | + | chr4_1:52429706-52429725 | None:intergenic | 30.0% |
| ACCAATGATTTGAAGGTAAT+AGG | + | chr4_1:52429763-52429782 | None:intergenic | 30.0% | |
| ATTTCCTTTAACAGGTAAAG+AGG | + | chr4_1:52429803-52429822 | None:intergenic | 30.0% | |
| TACCTGTTAAAGGAAATTTC+AGG | - | chr4_1:52429806-52429825 | Msa0554740:intron | 30.0% | |
| AACCTGAAATTTCCTTTAAC+AGG | + | chr4_1:52429811-52429830 | None:intergenic | 30.0% | |
| AACCAAGACAACATTGAAAA+CGG | + | chr4_1:52429863-52429882 | None:intergenic | 30.0% | |
| AAGCTGAAACACTGTTTAAT+AGG | - | chr4_1:52430146-52430165 | Msa0554740:intron | 30.0% | |
| !!! | TTTAAATTAGTTTTCTCGGG+TGG | - | chr4_1:52430305-52430324 | Msa0554740:intron | 30.0% |
| !!! | TTAAATTAGTTTTCTCGGGT+GGG | - | chr4_1:52430306-52430325 | Msa0554740:intron | 30.0% |
| !! | TTCGTAAAAGCATTAAGGTT+TGG | + | chr4_1:52430344-52430363 | None:intergenic | 30.0% |
| ! | AACCTTAATGCTTTTACGAA+AGG | - | chr4_1:52430344-52430363 | Msa0554740:intron | 30.0% |
| !! | TTCCTTTCGTAAAAGCATTA+AGG | + | chr4_1:52430349-52430368 | None:intergenic | 30.0% |
| ATACTGTATGGACAATATTG+GGG | + | chr4_1:52430401-52430420 | None:intergenic | 30.0% | |
| GTAACTTAATGATGTCTTTC+TGG | - | chr4_1:52430693-52430712 | Msa0554740:intron | 30.0% | |
| ! | ATAATTTACAGGGTGCTTAT+TGG | - | chr4_1:52430905-52430924 | Msa0554740:intron | 30.0% |
| ! | TAATTTACAGGGTGCTTATT+GGG | - | chr4_1:52430906-52430925 | Msa0554740:intron | 30.0% |
| !!! | TGGGATCTACATTTTGTTTT+TGG | - | chr4_1:52430925-52430944 | Msa0554740:intron | 30.0% |
| CATTCCTACAATAACTGTTA+CGG | + | chr4_1:52430953-52430972 | None:intergenic | 30.0% | |
| AGTTATTGTAGGAATGTTGA+TGG | - | chr4_1:52430957-52430976 | Msa0554740:intron | 30.0% | |
| !! | ATTTACCTTGGTTCTTTTAC+AGG | - | chr4_1:52430984-52431003 | Msa0554740:intron | 30.0% |
| AACTTGGGATTTAATGACAT+AGG | - | chr4_1:52431029-52431048 | Msa0554740:CDS | 30.0% | |
| TGTAATTCTGTACAAACTAC+TGG | - | chr4_1:52431130-52431149 | Msa0554740:intron | 30.0% | |
| TGCTAGAGTAGAATAAAGAT+AGG | - | chr4_1:52431182-52431201 | Msa0554740:intron | 30.0% | |
| TTAAGCAGGATTGACAAAAT+TGG | - | chr4_1:52431254-52431273 | Msa0554740:intron | 30.0% | |
| AACCTTGATTCATGTAAGAT+TGG | - | chr4_1:52431285-52431304 | Msa0554740:intron | 30.0% | |
| GAAACAAAGCATACAAGAAA+AGG | + | chr4_1:52431363-52431382 | None:intergenic | 30.0% | |
| !! | TCTTGTATGCTTTGTTTCAA+TGG | - | chr4_1:52431365-52431384 | Msa0554740:intron | 30.0% |
| TTTCAATGGAGAAAACGATA+GGG | - | chr4_1:52431379-52431398 | Msa0554740:intron | 30.0% | |
| AAGGAGAAAGAAGAATATGA+AGG | - | chr4_1:52431557-52431576 | Msa0554740:CDS | 30.0% | |
| !!! | AAACGTGGAGAAAAGTTTTT+TGG | - | chr4_1:52431617-52431636 | Msa0554740:intron | 30.0% |
| !!! | AACGTGGAGAAAAGTTTTTT+GGG | - | chr4_1:52431618-52431637 | Msa0554740:intron | 30.0% |
| AAATAGGAATAGAAATGGGT+GGG | + | chr4_1:52431720-52431739 | None:intergenic | 30.0% | |
| GGAAGAAATAGGAATAGAAA+TGG | + | chr4_1:52431725-52431744 | None:intergenic | 30.0% | |
| CACTACCAATACATTATGTT+TGG | + | chr4_1:52431766-52431785 | None:intergenic | 30.0% | |
| TGATCATATGCAAACAATTG+TGG | + | chr4_1:52431862-52431881 | None:intergenic | 30.0% | |
| ! | ATTTTCTTCACAACGCTTTT+AGG | - | chr4_1:52431933-52431952 | Msa0554740:CDS | 30.0% |
| ATATCCAGAAGTTTCTCTTT+CGG | + | chr4_1:52432072-52432091 | None:intergenic | 30.0% | |
| TATATTCCTTGTGGAATGAA+TGG | - | chr4_1:52432089-52432108 | Msa0554740:intron | 30.0% | |
| ATATTCCTTGTGGAATGAAT+GGG | - | chr4_1:52432090-52432109 | Msa0554740:intron | 30.0% | |
| !! | TCTGATCATTTTTCCTATTG+GGG | - | chr4_1:52432163-52432182 | Msa0554740:intron | 30.0% |
| GGAATAAAGCTAAATTCAAC+AGG | + | chr4_1:52432250-52432269 | None:intergenic | 30.0% | |
| !! | TTTATAATCACAAGTGCTGA+TGG | - | chr4_1:52432277-52432296 | Msa0554740:intron | 30.0% |
| AACTAATCTCTTGAAATGGT+TGG | - | chr4_1:52432308-52432327 | Msa0554740:intron | 30.0% | |
| ! | ACAAGTTCTTTTCATTACTC+AGG | + | chr4_1:52432336-52432355 | None:intergenic | 30.0% |
| AGTAATGAAAAGAACTTGTC+AGG | - | chr4_1:52432337-52432356 | Msa0554740:intron | 30.0% | |
| GTAATGAAAAGAACTTGTCA+GGG | - | chr4_1:52432338-52432357 | Msa0554740:intron | 30.0% | |
| AAGTTAGGTGATTCATACTA+AGG | - | chr4_1:52432388-52432407 | Msa0554740:intron | 30.0% | |
| !! | ATCTCTGAAGTCTCTTAATT+TGG | - | chr4_1:52432667-52432686 | Msa0554740:intron | 30.0% |
| TTATTCCTGTGATAAAGTGT+GGG | + | chr4_1:52433253-52433272 | None:intergenic | 30.0% | |
| TTTATTCCTGTGATAAAGTG+TGG | + | chr4_1:52433254-52433273 | None:intergenic | 30.0% | |
| ! | CTTTGATTTAACCCATATGT+CGG | - | chr4_1:52433948-52433967 | Msa0554740:intron | 30.0% |
| AAACAGAATTCAAGAATCTG+AGG | - | chr4_1:52434010-52434029 | Msa0554740:intron | 30.0% | |
| ! | GTTAATTGCTGGTAATTTTG+TGG | - | chr4_1:52434152-52434171 | Msa0554740:intron | 30.0% |
| TGTTTGTCAAACAAAAATGG+AGG | + | chr4_1:52434179-52434198 | None:intergenic | 30.0% | |
| CCATGTTTGTCAAACAAAAA+TGG | + | chr4_1:52434182-52434201 | None:intergenic | 30.0% | |
| !! | CCATTTTTGTTTGACAAACA+TGG | - | chr4_1:52434179-52434198 | Msa0554740:intron | 30.0% |
| ! | TGACAAACATGGTTTCATTT+TGG | - | chr4_1:52434190-52434209 | Msa0554740:intron | 30.0% |
| ! | TAGGTTTTCAACATGATCAA+GGG | + | chr4_1:52434229-52434248 | None:intergenic | 30.0% |
| ! | TTAGGTTTTCAACATGATCA+AGG | + | chr4_1:52434230-52434249 | None:intergenic | 30.0% |
| ! | ACTTTTGCTAAGTTCATATG+GGG | + | chr4_1:52434461-52434480 | None:intergenic | 30.0% |
| ! | GACTTTTGCTAAGTTCATAT+GGG | + | chr4_1:52434462-52434481 | None:intergenic | 30.0% |
| ! | TGACTTTTGCTAAGTTCATA+TGG | + | chr4_1:52434463-52434482 | None:intergenic | 30.0% |
| AAAAGTCATCTAAATTGCCA+GGG | - | chr4_1:52434475-52434494 | Msa0554740:exon | 30.0% | |
| ! | TCTTATTCTTTAGGAAAAGG+GGG | - | chr4_1:52434706-52434725 | Msa0554740:intron | 30.0% |
| GAGAGCAAAGATATATAGTT+TGG | + | chr4_1:52434917-52434936 | None:intergenic | 30.0% | |
| ATGTTTATGGTCACAATTTC+AGG | - | chr4_1:52434939-52434958 | Msa0554740:intron | 30.0% | |
| TGTTTATGGTCACAATTTCA+GGG | - | chr4_1:52434940-52434959 | Msa0554740:intron | 30.0% | |
| CATAGGCTAATATGACTTTA+TGG | - | chr4_1:52435231-52435250 | Msa0554740:five_prime_UTR | 30.0% | |
| ! | AATTATGAATTTTCTCCCTG+TGG | - | chr4_1:52435264-52435283 | Msa0554740:five_prime_UTR | 30.0% |
| TCATTCTGCTAATTGTATGT+AGG | - | chr4_1:52435313-52435332 | Msa0554740:five_prime_UTR | 30.0% | |
| !! | TCACTTTTCGTTTATGCGTT+TGG | - | chr4_1:52425141-52425160 | Msa0554740:three_prime_UTR | 35.0% |
| ! | GATGAAGTTGATTATGCAGT+TGG | - | chr4_1:52425641-52425660 | Msa0554740:intron | 35.0% |
| TTCCTGAATGATCGTCAATT+TGG | - | chr4_1:52425692-52425711 | Msa0554740:intron | 35.0% | |
| ! | TAGAATATTTTGTCGATGGG+TGG | - | chr4_1:52425835-52425854 | Msa0554740:intron | 35.0% |
| ! | AATATGAAGTGTCTGGACAA+AGG | + | chr4_1:52426073-52426092 | None:intergenic | 35.0% |
| ! | AGACGAAAATATGAAGTGTC+TGG | + | chr4_1:52426080-52426099 | None:intergenic | 35.0% |
| TTTACCCCTATCATAATACC+TGG | - | chr4_1:52426437-52426456 | Msa0554740:intron | 35.0% | |
| ATTGATCGTATGACTCTGTT+TGG | + | chr4_1:52426632-52426651 | None:intergenic | 35.0% | |
| ! | CATACGATCAATTATCGACT+TGG | - | chr4_1:52426640-52426659 | Msa0554740:intron | 35.0% |
| TATTTGCCAGGATCTATACT+TGG | - | chr4_1:52426705-52426724 | Msa0554740:intron | 35.0% | |
| ATTTGCCAGGATCTATACTT+GGG | - | chr4_1:52426706-52426725 | Msa0554740:intron | 35.0% | |
| TCTATACTTGGGAGAATATG+CGG | - | chr4_1:52426717-52426736 | Msa0554740:intron | 35.0% | |
| TGAGACTTTGACAATCTTGA+AGG | + | chr4_1:52426843-52426862 | None:intergenic | 35.0% | |
| TGTGACCAAATTTCAGATCA+TGG | - | chr4_1:52426883-52426902 | Msa0554740:CDS | 35.0% | |
| ATATACAACAAAGAGGCCAA+GGG | + | chr4_1:52427007-52427026 | None:intergenic | 35.0% | |
| AATATACAACAAAGAGGCCA+AGG | + | chr4_1:52427008-52427027 | None:intergenic | 35.0% | |
| TCAATACCTTCCTAAAGACT+TGG | - | chr4_1:52427282-52427301 | Msa0554740:intron | 35.0% | |
| AAGTGATGAAAATATGGGAC+TGG | + | chr4_1:52427323-52427342 | None:intergenic | 35.0% | |
| AGGCGAAGTGATGAAAATAT+GGG | + | chr4_1:52427328-52427347 | None:intergenic | 35.0% | |
| AAGGCGAAGTGATGAAAATA+TGG | + | chr4_1:52427329-52427348 | None:intergenic | 35.0% | |
| ! | TTTCTAGAAGTTTAGAAGGG+CGG | + | chr4_1:52427500-52427519 | None:intergenic | 35.0% |
| ! | CGGTTTCTAGAAGTTTAGAA+GGG | + | chr4_1:52427503-52427522 | None:intergenic | 35.0% |
| ACACAAATACCATTGTTGCT+TGG | - | chr4_1:52427531-52427550 | Msa0554740:intron | 35.0% | |
| ! | CACAAATACCATTGTTGCTT+GGG | - | chr4_1:52427532-52427551 | Msa0554740:intron | 35.0% |
| TGGTATTTATAGCCTGCTAT+GGG | + | chr4_1:52427580-52427599 | None:intergenic | 35.0% | |
| ! | CTTGCAAAAAAGTACGGTAA+GGG | + | chr4_1:52427673-52427692 | None:intergenic | 35.0% |
| ! | ACTTGCAAAAAAGTACGGTA+AGG | + | chr4_1:52427674-52427693 | None:intergenic | 35.0% |
| GTATCACCAATTATTTGGGA+TGG | - | chr4_1:52427834-52427853 | Msa0554740:intron | 35.0% | |
| GGATGGTTAATTTCCCAATT+TGG | - | chr4_1:52427851-52427870 | Msa0554740:intron | 35.0% | |
| ! | CGGACGTGATATATTGATTA+CGG | + | chr4_1:52428048-52428067 | None:intergenic | 35.0% |
| ! | AATTGGATTAATGGATGGGT+AGG | + | chr4_1:52428141-52428160 | None:intergenic | 35.0% |
| ! | TCTTGTTAACTTGGTCAAGT+TGG | - | chr4_1:52428451-52428470 | Msa0554740:intron | 35.0% |
| !! | TAACTTGGTCAAGTTGGATT+TGG | - | chr4_1:52428457-52428476 | Msa0554740:intron | 35.0% |
| ! | CACACAAGCATATCTTTTGA+AGG | + | chr4_1:52428615-52428634 | None:intergenic | 35.0% |
| TGGAATCTCTCAATATGAAG+TGG | - | chr4_1:52428769-52428788 | Msa0554740:intron | 35.0% | |
| ACCTGATAAAGGCTTCATAT+CGG | + | chr4_1:52428814-52428833 | None:intergenic | 35.0% | |
| AGATGCAACAAACCTGATAA+AGG | + | chr4_1:52428825-52428844 | None:intergenic | 35.0% | |
| ! | TGCATCCTTTTGATCACAAT+AGG | - | chr4_1:52428845-52428864 | Msa0554740:intron | 35.0% |
| ! | TTTGGCATCAGTTTTCTAAG+AGG | - | chr4_1:52429312-52429331 | Msa0554740:CDS | 35.0% |
| TGAAACATCACAATAAGGCA+AGG | + | chr4_1:52429350-52429369 | None:intergenic | 35.0% | |
| TGCTGTGAAACATCACAATA+AGG | + | chr4_1:52429355-52429374 | None:intergenic | 35.0% | |
| ATAGTTCAGTTGAAGATTCG+GGG | + | chr4_1:52429511-52429530 | None:intergenic | 35.0% | |
| GATAGTTCAGTTGAAGATTC+GGG | + | chr4_1:52429512-52429531 | None:intergenic | 35.0% | |
| GCTTACGCAGTTATAAATTG+AGG | + | chr4_1:52429667-52429686 | None:intergenic | 35.0% | |
| GCCTATTACCTTCAAATCAT+TGG | - | chr4_1:52429759-52429778 | Msa0554740:intron | 35.0% | |
| CATTCACACCAATGATTTGA+AGG | + | chr4_1:52429770-52429789 | None:intergenic | 35.0% | |
| ! | TTCCGTTTTCAATGTTGTCT+TGG | - | chr4_1:52429858-52429877 | Msa0554740:intron | 35.0% |
| TTGCCCTCTTAAATTTGGAA+GGG | - | chr4_1:52429903-52429922 | Msa0554740:intron | 35.0% | |
| ACACCCTTCCAAATTTAAGA+GGG | + | chr4_1:52429909-52429928 | None:intergenic | 35.0% | |
| ! | AAAGCATTCACAGGACAATA+AGG | + | chr4_1:52430071-52430090 | None:intergenic | 35.0% |
| TACTTAAGTTCAACGAGTAG+TGG | + | chr4_1:52430216-52430235 | None:intergenic | 35.0% | |
| TACTGTATGGACAATATTGG+GGG | + | chr4_1:52430400-52430419 | None:intergenic | 35.0% | |
| TAGTAATCGTAATCAGCTGT+TGG | - | chr4_1:52430480-52430499 | Msa0554740:intron | 35.0% | |
| CACTCCTTGAGTCATTAAAA+TGG | - | chr4_1:52430578-52430597 | Msa0554740:intron | 35.0% | |
| !! | CTCTCCATTTTAATGACTCA+AGG | + | chr4_1:52430585-52430604 | None:intergenic | 35.0% |
| CTTGAGTCATTAAAATGGAG+AGG | - | chr4_1:52430583-52430602 | Msa0554740:intron | 35.0% | |
| GATGAGTGAACTTTGTTGAT+TGG | - | chr4_1:52430659-52430678 | Msa0554740:intron | 35.0% | |
| AATGAGGATGTAATACCCAT+TGG | - | chr4_1:52430729-52430748 | Msa0554740:intron | 35.0% | |
| ! | AGATGCAATATTTCTGACAG+AGG | - | chr4_1:52430818-52430837 | Msa0554740:intron | 35.0% |
| ! | GATGCAATATTTCTGACAGA+GGG | - | chr4_1:52430819-52430838 | Msa0554740:intron | 35.0% |
| !! | GTTGATGGTAACATTTACCT+TGG | - | chr4_1:52430972-52430991 | Msa0554740:intron | 35.0% |
| ! | GCATGTTTAGCTCATTTGAA+AGG | - | chr4_1:52431056-52431075 | Msa0554740:CDS | 35.0% |
| TAGCTCATTTGAAAGGTGAT+TGG | - | chr4_1:52431063-52431082 | Msa0554740:intron | 35.0% | |
| CACCAATCTTACATGAATCA+AGG | + | chr4_1:52431290-52431309 | None:intergenic | 35.0% | |
| !! | TCATGTAAGATTGGTGATGA+AGG | - | chr4_1:52431294-52431313 | Msa0554740:intron | 35.0% |
| !! | TAAGATTGGTGATGAAGGAT+TGG | - | chr4_1:52431299-52431318 | Msa0554740:intron | 35.0% |
| GTTTCAATGGAGAAAACGAT+AGG | - | chr4_1:52431378-52431397 | Msa0554740:intron | 35.0% | |
| !! | AGCGTCAGTTTTAACCTTAT+GGG | - | chr4_1:52431534-52431553 | Msa0554740:CDS | 35.0% |
| !! | TCAGTTTTAACCTTATGGGA+AGG | - | chr4_1:52431538-52431557 | Msa0554740:CDS | 35.0% |
| TCTCCAATTCTCTTTAAACG+TGG | - | chr4_1:52431602-52431621 | Msa0554740:intron | 35.0% | |
| TCTCCACGTTTAAAGAGAAT+TGG | + | chr4_1:52431608-52431627 | None:intergenic | 35.0% | |
| !!! | TGGAGAAAAGTTTTTTGGGT+GGG | - | chr4_1:52431622-52431641 | Msa0554740:intron | 35.0% |
| AGGTACGTATTTCTCTTGTT+TGG | + | chr4_1:52431691-52431710 | None:intergenic | 35.0% | |
| GAAATAGGAATAGAAATGGG+TGG | + | chr4_1:52431721-52431740 | None:intergenic | 35.0% | |
| ! | GATTTGGGATAGGAAGAAAT+AGG | + | chr4_1:52431736-52431755 | None:intergenic | 35.0% |
| !! | TGGATTAATGGATTTGGGAT+AGG | + | chr4_1:52431746-52431765 | None:intergenic | 35.0% |
| !! | TATTGGTAGTGATGACTTCT+TGG | - | chr4_1:52431775-52431794 | Msa0554740:intron | 35.0% |
| TCATAAGCAATTGATCTGCT+TGG | - | chr4_1:52431956-52431975 | Msa0554740:intron | 35.0% | |
| GAATTGTCTGATACTGAAGT+TGG | - | chr4_1:52431978-52431997 | Msa0554740:intron | 35.0% | |
| GATACTGAAGTTGGAAACAA+TGG | - | chr4_1:52431987-52432006 | Msa0554740:intron | 35.0% | |
| TCAAACCTGATAAATGCTCT+AGG | + | chr4_1:52432013-52432032 | None:intergenic | 35.0% | |
| ACTTCTGGATATATTCCTTG+TGG | - | chr4_1:52432080-52432099 | Msa0554740:intron | 35.0% | |
| ! | CGTGAAAGTACATCTCATAA+TGG | + | chr4_1:52432130-52432149 | None:intergenic | 35.0% |
| !!! | CTTCTCTCTCTCTGTTTTTT+GGG | - | chr4_1:52432210-52432229 | Msa0554740:intron | 35.0% |
| TTCTTTGAGTCGTAGAAGTT+AGG | - | chr4_1:52432373-52432392 | Msa0554740:intron | 35.0% | |
| CATGCAAAAAACAACAGTGA+AGG | + | chr4_1:52432517-52432536 | None:intergenic | 35.0% | |
| TTGTTAGTGACAGTGGTTTA+AGG | - | chr4_1:52432627-52432646 | Msa0554740:intron | 35.0% | |
| AGTGGTTTAAGGAAATTGTG+TGG | - | chr4_1:52432638-52432657 | Msa0554740:intron | 35.0% | |
| ! | GCAAATCAATCAGATTGGTT+GGG | + | chr4_1:52432944-52432963 | None:intergenic | 35.0% |
| AGCAAATCAATCAGATTGGT+TGG | + | chr4_1:52432945-52432964 | None:intergenic | 35.0% | |
| CAGTAGCAAATCAATCAGAT+TGG | + | chr4_1:52432949-52432968 | None:intergenic | 35.0% | |
| AGGAGCTCAATTGGTATTAT+TGG | + | chr4_1:52432984-52433003 | None:intergenic | 35.0% | |
| TCCTAGAAATCCTATTACAC+AGG | - | chr4_1:52433041-52433060 | Msa0554740:intron | 35.0% | |
| ACCTGTGTAATAGGATTTCT+AGG | + | chr4_1:52433045-52433064 | None:intergenic | 35.0% | |
| TGGTAAAATCAAGTGAGAGT+GGG | - | chr4_1:52433169-52433188 | Msa0554740:intron | 35.0% | |
| TAATTTCCGTTCCCATTGAA+AGG | - | chr4_1:52433220-52433239 | Msa0554740:intron | 35.0% | |
| ATCTAACCTTTCAATGGGAA+CGG | + | chr4_1:52433229-52433248 | None:intergenic | 35.0% | |
| TGGGAATCTAACCTTTCAAT+GGG | + | chr4_1:52433234-52433253 | None:intergenic | 35.0% | |
| CACAGGAATAAAAGAGATTC+TGG | - | chr4_1:52433262-52433281 | Msa0554740:intron | 35.0% | |
| TTCTGGATGAAGTATATTCC+TGG | - | chr4_1:52433279-52433298 | Msa0554740:intron | 35.0% | |
| TCTGGATGAAGTATATTCCT+GGG | - | chr4_1:52433280-52433299 | Msa0554740:intron | 35.0% | |
| !!! | CATTTTGAATTTGCTGATGC+AGG | - | chr4_1:52433380-52433399 | Msa0554740:intron | 35.0% |
| TACTGCAAAGTGATTATCTG+TGG | - | chr4_1:52433503-52433522 | Msa0554740:CDS | 35.0% | |
| ! | TGTGGTTTTCTTATACCGTT+TGG | - | chr4_1:52433544-52433563 | Msa0554740:CDS | 35.0% |
| !!! | GTCTCTTTTTTTGCAATGCT+TGG | - | chr4_1:52433678-52433697 | Msa0554740:intron | 35.0% |
| TGTCAGTCAGAAGAGATTAA+TGG | + | chr4_1:52433818-52433837 | None:intergenic | 35.0% | |
| !! | TCAAATTAGCACCGACATAT+GGG | + | chr4_1:52433962-52433981 | None:intergenic | 35.0% |
| !! | TTCAAATTAGCACCGACATA+TGG | + | chr4_1:52433963-52433982 | None:intergenic | 35.0% |
| AAAACTGTGGAGTTAATTGC+TGG | - | chr4_1:52434141-52434160 | Msa0554740:intron | 35.0% | |
| !! | TTCTTTTTCACATTCGCACA+TGG | + | chr4_1:52434257-52434276 | None:intergenic | 35.0% |
| !!! | GAAAAAGAAGTTTTAGGGCT+TGG | - | chr4_1:52434268-52434287 | Msa0554740:intron | 35.0% |
| TCCTAAATGCGACAATTAGT+TGG | - | chr4_1:52434336-52434355 | Msa0554740:CDS | 35.0% | |
| ACCAACTAATTGTCGCATTT+AGG | + | chr4_1:52434340-52434359 | None:intergenic | 35.0% | |
| !!! | GAATTTTCTGGTTTTGCGAA+AGG | - | chr4_1:52434417-52434436 | Msa0554740:CDS | 35.0% |
| CAAAAGTCATCTAAATTGCC+AGG | - | chr4_1:52434474-52434493 | Msa0554740:CDS | 35.0% | |
| CAATGTTACACTTACATTGC+TGG | - | chr4_1:52434671-52434690 | Msa0554740:intron | 35.0% | |
| ATGTAGGGGAAATTTATAGC+CGG | + | chr4_1:52434832-52434851 | None:intergenic | 35.0% | |
| TAGTTTGGCAACTCTACATA+AGG | + | chr4_1:52434902-52434921 | None:intergenic | 35.0% | |
| TCTTTGCTCTCACATGTTTA+TGG | - | chr4_1:52434926-52434945 | Msa0554740:intron | 35.0% | |
| AAGATTCAAAGAAACCAACG+CGG | + | chr4_1:52434970-52434989 | None:intergenic | 35.0% | |
| ATTAATTCACCTCCCAAACT+TGG | - | chr4_1:52435103-52435122 | Msa0554740:intron | 35.0% | |
| ! | TGACATGCTAGAAAAGCATA+AGG | - | chr4_1:52435190-52435209 | Msa0554740:intron | 35.0% |
| ! | GACATGCTAGAAAAGCATAA+GGG | - | chr4_1:52435191-52435210 | Msa0554740:intron | 35.0% |
| ! | ACATGCTAGAAAAGCATAAG+GGG | - | chr4_1:52435192-52435211 | Msa0554740:intron | 35.0% |
| GGCTAATATGACTTTATGGA+AGG | - | chr4_1:52435235-52435254 | Msa0554740:five_prime_UTR | 35.0% | |
| AAAAACACTTCTGTACCACA+GGG | + | chr4_1:52435282-52435301 | None:intergenic | 35.0% | |
| AAAAAACACTTCTGTACCAC+AGG | + | chr4_1:52435283-52435302 | None:intergenic | 35.0% | |
| ! | CGCTTCTTGTTGTAAGCAAA+TGG | + | chr4_1:52425034-52425053 | None:intergenic | 40.0% |
| !! | TGCTTACAACAAGAAGCGTT+CGG | - | chr4_1:52425036-52425055 | Msa0554740:three_prime_UTR | 40.0% |
| AACTGTTACCGTGACATGAT+CGG | + | chr4_1:52425109-52425128 | None:intergenic | 40.0% | |
| AGCCAAATTGACGATCATTC+AGG | + | chr4_1:52425697-52425716 | None:intergenic | 40.0% | |
| ! | GGTTATTGAATGGATGATGG+TGG | - | chr4_1:52425776-52425795 | Msa0554740:intron | 40.0% |
| GCAAATGTGGGAGTTTGAAA+TGG | - | chr4_1:52425926-52425945 | Msa0554740:intron | 40.0% | |
| ! | AATGTGGGAGTTTGAAATGG+TGG | - | chr4_1:52425929-52425948 | Msa0554740:intron | 40.0% |
| ! | ATCGTTTTCTTATCCGTCCA+TGG | - | chr4_1:52425957-52425976 | Msa0554740:intron | 40.0% |
| TGTAAGCGTAAATCCATGGA+CGG | + | chr4_1:52425973-52425992 | None:intergenic | 40.0% | |
| GTGTGTCCAGAAAATAAGTG+AGG | - | chr4_1:52426023-52426042 | Msa0554740:intron | 40.0% | |
| CACTGCAATCTTTATTCGAC+AGG | - | chr4_1:52426106-52426125 | Msa0554740:intron | 40.0% | |
| ! | AGACATTTTCTATGCTGCCA+CGG | - | chr4_1:52426144-52426163 | Msa0554740:intron | 40.0% |
| !! | ATTTGCTGACTTATATCCCG+TGG | + | chr4_1:52426164-52426183 | None:intergenic | 40.0% |
| GCTCTCCAGGTAAATCATAT+AGG | - | chr4_1:52426248-52426267 | Msa0554740:CDS | 40.0% | |
| CAGAGCCTATATGATTTACC+TGG | + | chr4_1:52426256-52426275 | None:intergenic | 40.0% | |
| AGGATGAGCTTAGCTTATAG+CGG | + | chr4_1:52426575-52426594 | None:intergenic | 40.0% | |
| ! | GCTGATAAGCTAGCTTAAAG+AGG | + | chr4_1:52426595-52426614 | None:intergenic | 40.0% |
| ATTCTCCCAAGTATAGATCC+TGG | + | chr4_1:52426714-52426733 | None:intergenic | 40.0% | |
| CTATACTTGGGAGAATATGC+GGG | - | chr4_1:52426718-52426737 | Msa0554740:intron | 40.0% | |
| ATGGATGTCATCTCATCTCA+GGG | - | chr4_1:52426757-52426776 | Msa0554740:intron | 40.0% | |
| AGAAAGATCTACCGAGAGTA+AGG | + | chr4_1:52426788-52426807 | None:intergenic | 40.0% | |
| ! | CCAGTCCATGATCTGAAATT+TGG | + | chr4_1:52426891-52426910 | None:intergenic | 40.0% |
| CCAAATTTCAGATCATGGAC+TGG | - | chr4_1:52426888-52426907 | Msa0554740:CDS | 40.0% | |
| ATCTAGCATACTCATGCTGT+TGG | - | chr4_1:52427131-52427150 | Msa0554740:intron | 40.0% | |
| ! | TAAGACCTCTAGAAAGGCTT+AGG | - | chr4_1:52427426-52427445 | Msa0554740:intron | 40.0% |
| ! | GCGGTTTCTAGAAGTTTAGA+AGG | + | chr4_1:52427504-52427523 | None:intergenic | 40.0% |
| GTGGTATTTATAGCCTGCTA+TGG | + | chr4_1:52427581-52427600 | None:intergenic | 40.0% | |
| AAGTACGGTAAGGGATACTA+GGG | + | chr4_1:52427664-52427683 | None:intergenic | 40.0% | |
| AAAGTACGGTAAGGGATACT+AGG | + | chr4_1:52427665-52427684 | None:intergenic | 40.0% | |
| AGAAATAGGTGTGCCAACAA+TGG | + | chr4_1:52427931-52427950 | None:intergenic | 40.0% | |
| ACGTCCGAAGAATGAAATTC+TGG | - | chr4_1:52428061-52428080 | Msa0554740:intron | 40.0% | |
| AACAAAAAGGCTTTGCAGAG+AGG | + | chr4_1:52428238-52428257 | None:intergenic | 40.0% | |
| CCATCAGTAAAAGCAACCTA+GGG | + | chr4_1:52428326-52428345 | None:intergenic | 40.0% | |
| ACCATCAGTAAAAGCAACCT+AGG | + | chr4_1:52428327-52428346 | None:intergenic | 40.0% | |
| CAAGTTAACAAGACCAGAGA+AGG | + | chr4_1:52428444-52428463 | None:intergenic | 40.0% | |
| !! | CTTCTCTGGTCTTGTTAACT+TGG | - | chr4_1:52428442-52428461 | Msa0554740:intron | 40.0% |
| !! | GCACTGTTCATTTTCAAGGT+TGG | - | chr4_1:52428504-52428523 | Msa0554740:intron | 40.0% |
| TCCGATATGAAGCCTTTATC+AGG | - | chr4_1:52428810-52428829 | Msa0554740:intron | 40.0% | |
| TCTGGCCTATTGTGATCAAA+AGG | + | chr4_1:52428853-52428872 | None:intergenic | 40.0% | |
| AACTTGGGTGGAATATGAGT+GGG | + | chr4_1:52428976-52428995 | None:intergenic | 40.0% | |
| ! | CATATTCCACCCAAGTTGAA+AGG | - | chr4_1:52428979-52428998 | Msa0554740:intron | 40.0% |
| CACTCAATGCCTTTCAACTT+GGG | + | chr4_1:52428991-52429010 | None:intergenic | 40.0% | |
| TCACTCAATGCCTTTCAACT+TGG | + | chr4_1:52428992-52429011 | None:intergenic | 40.0% | |
| CATGCACAGAGACAAGTATA+TGG | + | chr4_1:52429075-52429094 | None:intergenic | 40.0% | |
| CTTGTCAAGCTTGTAAGTTC+TGG | + | chr4_1:52429169-52429188 | None:intergenic | 40.0% | |
| CAAATCATTGGTGTGAATGC+AGG | - | chr4_1:52429771-52429790 | Msa0554740:intron | 40.0% | |
| TGCACCTCTTTACCTGTTAA+AGG | - | chr4_1:52429796-52429815 | Msa0554740:intron | 40.0% | |
| ATGTTGTCTTGGTTCATTCC+AGG | - | chr4_1:52429869-52429888 | Msa0554740:intron | 40.0% | |
| GAAGCTTGCCCTCTTAAATT+TGG | - | chr4_1:52429898-52429917 | Msa0554740:intron | 40.0% | |
| CTTGCCCTCTTAAATTTGGA+AGG | - | chr4_1:52429902-52429921 | Msa0554740:intron | 40.0% | |
| GACACCCTTCCAAATTTAAG+AGG | + | chr4_1:52429910-52429929 | None:intergenic | 40.0% | |
| TCTTGTAACATCTGCATGCT+TGG | - | chr4_1:52429928-52429947 | Msa0554740:intron | 40.0% | |
| ! | AGCAAGCTTAAAGCATTCAC+AGG | + | chr4_1:52430080-52430099 | None:intergenic | 40.0% |
| AGTAAGAAAAATATCGGGGG+AGG | - | chr4_1:52430232-52430251 | Msa0554740:intron | 40.0% | |
| TCGTAATCAGCTGTTGGAAA+TGG | - | chr4_1:52430486-52430505 | Msa0554740:intron | 40.0% | |
| GGGTTGGAGAAATAAAAGGT+TGG | + | chr4_1:52430531-52430550 | None:intergenic | 40.0% | |
| GCAAGGGTTGGAGAAATAAA+AGG | + | chr4_1:52430535-52430554 | None:intergenic | 40.0% | |
| ! | GATTCAAGTTTGACAGTGCA+GGG | + | chr4_1:52430793-52430812 | None:intergenic | 40.0% |
| ! | AGATTCAAGTTTGACAGTGC+AGG | + | chr4_1:52430794-52430813 | None:intergenic | 40.0% |
| ! | TGATGAAGGATTGGTGAACT+TGG | - | chr4_1:52431308-52431327 | Msa0554740:intron | 40.0% |
| ACTCTGCTTGTTTGGATGAA+TGG | - | chr4_1:52431479-52431498 | Msa0554740:intron | 40.0% | |
| !! | GAGCGTCAGTTTTAACCTTA+TGG | - | chr4_1:52431533-52431552 | Msa0554740:CDS | 40.0% |
| TCTTCTTTCTCCTTCCCATA+AGG | + | chr4_1:52431551-52431570 | None:intergenic | 40.0% | |
| !!! | GTGGAGAAAAGTTTTTTGGG+TGG | - | chr4_1:52431621-52431640 | Msa0554740:intron | 40.0% |
| TAGAAATGGGTGGGAAATAG+AGG | + | chr4_1:52431711-52431730 | None:intergenic | 40.0% | |
| TGTCATTGCAAGTGAAAGTG+TGG | - | chr4_1:52431905-52431924 | Msa0554740:CDS | 40.0% | |
| ! | AATGGCCTAGAGCATTTATC+AGG | - | chr4_1:52432005-52432024 | Msa0554740:intron | 40.0% |
| AAGCAGACATCAATGCCAAA+TGG | + | chr4_1:52432193-52432212 | None:intergenic | 40.0% | |
| !!! | GCTTCTCTCTCTCTGTTTTT+TGG | - | chr4_1:52432209-52432228 | Msa0554740:intron | 40.0% |
| TCTTGTAGGATTGTCTAGTC+TGG | - | chr4_1:52432476-52432495 | Msa0554740:intron | 40.0% | |
| TCTTGTAGGATTGTCTAGTC+TGG | - | chr4_1:52432476-52432495 | Msa0554740:intron | 40.0% | |
| ACTGTCACTAACAACAGTGA+AGG | + | chr4_1:52432621-52432640 | None:intergenic | 40.0% | |
| TTCACTGTTGTTAGTGACAG+TGG | - | chr4_1:52432620-52432639 | Msa0554740:intron | 40.0% | |
| GCTTACCAAATTACTGATGC+TGG | - | chr4_1:52432692-52432711 | Msa0554740:intron | 40.0% | |
| ATGGGAACACATACTTGCAA+GGG | + | chr4_1:52432726-52432745 | None:intergenic | 40.0% | |
| ! | TTGGTTTGAGCTAAGGCTTA+AGG | + | chr4_1:52432913-52432932 | None:intergenic | 40.0% |
| !! | AGCTCAATTGGTTTGAGCTA+AGG | + | chr4_1:52432920-52432939 | None:intergenic | 40.0% |
| GTGGTAAAATCAAGTGAGAG+TGG | - | chr4_1:52433168-52433187 | Msa0554740:intron | 40.0% | |
| AGAGTGGGAGAAGTTATAGT+TGG | - | chr4_1:52433184-52433203 | Msa0554740:intron | 40.0% | |
| GTGGGAATCTAACCTTTCAA+TGG | + | chr4_1:52433235-52433254 | None:intergenic | 40.0% | |
| AGATTCCCACACTTTATCAC+AGG | - | chr4_1:52433245-52433264 | Msa0554740:intron | 40.0% | |
| AGCATAAATTGTTCAGCCTC+TGG | - | chr4_1:52433322-52433341 | Msa0554740:intron | 40.0% | |
| CAAACAAATCAAGGTCAGTG+AGG | + | chr4_1:52433415-52433434 | None:intergenic | 40.0% | |
| !! | CTCACTGACCTTGATTTGTT+TGG | - | chr4_1:52433413-52433432 | Msa0554740:intron | 40.0% |
| ACAAATTTGACTGGGACAGA+GGG | + | chr4_1:52433780-52433799 | None:intergenic | 40.0% | |
| TGAGACGGACAAATTTGACT+GGG | + | chr4_1:52433788-52433807 | None:intergenic | 40.0% | |
| ATGAGACGGACAAATTTGAC+TGG | + | chr4_1:52433789-52433808 | None:intergenic | 40.0% | |
| AATTAACTGCATGCTACAGC+TGG | - | chr4_1:52433923-52433942 | Msa0554740:intron | 40.0% | |
| ! | ATTCAAGAATCTGAGGTCCT+TGG | - | chr4_1:52434017-52434036 | Msa0554740:intron | 40.0% |
| ATCACAGAACAGCAACCTTA+CGG | - | chr4_1:52434116-52434135 | Msa0554740:intron | 40.0% | |
| ACATTCGCACATGGCTATTT+AGG | + | chr4_1:52434248-52434267 | None:intergenic | 40.0% | |
| ! | TAGTCGGGATGTGAATTTTC+TGG | - | chr4_1:52434405-52434424 | Msa0554740:CDS | 40.0% |
| CTAAGTTCATATGGGGTAGT+TGG | + | chr4_1:52434454-52434473 | None:intergenic | 40.0% | |
| GTTACACTTACATTGCTGGA+TGG | - | chr4_1:52434675-52434694 | Msa0554740:intron | 40.0% | |
| GAAAAGGGGGACTATCTAAA+TGG | - | chr4_1:52434719-52434738 | Msa0554740:intron | 40.0% | |
| AATACTTGCATCACCTCTAC+TGG | - | chr4_1:52434993-52435012 | Msa0554740:intron | 40.0% | |
| AAACTTGAGATCTCTGACGT+TGG | - | chr4_1:52435040-52435059 | Msa0554740:intron | 40.0% | |
| TCCCAAACTTGGTAAGCTTT+CGG | - | chr4_1:52435114-52435133 | Msa0554740:intron | 40.0% | |
| GTAATAAGAGTGGCGTGAAG+TGG | + | chr4_1:52424963-52424982 | None:intergenic | 45.0% | |
| CAACTTCACCGATCATGTCA+CGG | - | chr4_1:52425098-52425117 | Msa0554740:three_prime_UTR | 45.0% | |
| ACACACAAGTCCAACAGTGA+CGG | + | chr4_1:52426009-52426028 | None:intergenic | 45.0% | |
| ! | GACATTTTCTATGCTGCCAC+GGG | - | chr4_1:52426145-52426164 | Msa0554740:intron | 45.0% |
| ATTTCGAGATTGTGCTCTCC+AGG | - | chr4_1:52426235-52426254 | Msa0554740:CDS | 45.0% | |
| !! | ATGCGGGTGTTGATGATTCT+TGG | - | chr4_1:52426734-52426753 | Msa0554740:intron | 45.0% |
| !! | GGGTGTTGATGATTCTTGGA+TGG | - | chr4_1:52426738-52426757 | Msa0554740:intron | 45.0% |
| GATGGATGTCATCTCATCTC+AGG | - | chr4_1:52426756-52426775 | Msa0554740:intron | 45.0% | |
| TCAGGGTTCATCCTTACTCT+CGG | - | chr4_1:52426774-52426793 | Msa0554740:intron | 45.0% | |
| !!! | GCGTCTGATGTCACTGATTT+TGG | - | chr4_1:52426808-52426827 | Msa0554740:intron | 45.0% |
| TAGAGGTCTTAGAGCCTTTC+TGG | + | chr4_1:52427417-52427436 | None:intergenic | 45.0% | |
| !! | AGGCTCTAAGACCTCTAGAA+AGG | - | chr4_1:52427420-52427439 | Msa0554740:intron | 45.0% |
| TTATAGCCTGCTATGGGCTT+GGG | + | chr4_1:52427574-52427593 | None:intergenic | 45.0% | |
| TTTATAGCCTGCTATGGGCT+TGG | + | chr4_1:52427575-52427594 | None:intergenic | 45.0% | |
| CTTGAGAATGCTCTCAAGAG+TGG | + | chr4_1:52427600-52427619 | None:intergenic | 45.0% | |
| !! | CACTCTTGAGAGCATTCTCA+AGG | - | chr4_1:52427598-52427617 | Msa0554740:intron | 45.0% |
| TGACCTTGCCTTGTGAGAAA+AGG | - | chr4_1:52427786-52427805 | Msa0554740:intron | 45.0% | |
| ! | AAGCCTTTTCTCACAAGGCA+AGG | + | chr4_1:52427792-52427811 | None:intergenic | 45.0% |
| ! | CAACGAAGCCTTTTCTCACA+AGG | + | chr4_1:52427797-52427816 | None:intergenic | 45.0% |
| !! | CGAAAGCACCTTCGTGATAA+TGG | + | chr4_1:52428113-52428132 | None:intergenic | 45.0% |
| ! | TGTCTAGAAGCTTTGTCCCT+AGG | - | chr4_1:52428307-52428326 | Msa0554740:intron | 45.0% |
| !!! | CCCTAGGTTGCTTTTACTGA+TGG | - | chr4_1:52428323-52428342 | Msa0554740:CDS | 45.0% |
| CTTGTCAAGTTTGACAGACC+TGG | + | chr4_1:52428374-52428393 | None:intergenic | 45.0% | |
| TTGGATTTGGAGAGATGTCC+TGG | - | chr4_1:52428470-52428489 | Msa0554740:intron | 45.0% | |
| TGGATTTGGAGAGATGTCCT+GGG | - | chr4_1:52428471-52428490 | Msa0554740:intron | 45.0% | |
| !!! | GGAGGCACTGTTCATTTTCA+AGG | - | chr4_1:52428500-52428519 | Msa0554740:intron | 45.0% |
| CAACTTGGGTGGAATATGAG+TGG | + | chr4_1:52428977-52428996 | None:intergenic | 45.0% | |
| TCAATGCCTTTCAACTTGGG+TGG | + | chr4_1:52428988-52429007 | None:intergenic | 45.0% | |
| CTTGTCAAGCTTGCAAGTTC+TGG | + | chr4_1:52429261-52429280 | None:intergenic | 45.0% | |
| GCATGCTTGGATTCACTTTC+AGG | - | chr4_1:52429941-52429960 | Msa0554740:intron | 45.0% | |
| AGCACTCAACCAGTGAAGAA+AGG | + | chr4_1:52430117-52430136 | None:intergenic | 45.0% | |
| CAGCTGTTGGAAATGGTAGT+CGG | - | chr4_1:52430493-52430512 | Msa0554740:intron | 45.0% | |
| AGCTGTTGGAAATGGTAGTC+GGG | - | chr4_1:52430494-52430513 | Msa0554740:intron | 45.0% | |
| GGAGTGACAAGACAGTTTGA+GGG | + | chr4_1:52430564-52430583 | None:intergenic | 45.0% | |
| AGGAGTGACAAGACAGTTTG+AGG | + | chr4_1:52430565-52430584 | None:intergenic | 45.0% | |
| ! | TTTCTGACAGAGGGTGTGAT+AGG | - | chr4_1:52430828-52430847 | Msa0554740:intron | 45.0% |
| GGCTCCGTAACAGTTATTGT+AGG | - | chr4_1:52430946-52430965 | Msa0554740:intron | 45.0% | |
| CCAGTCCTGTAAAAGAACCA+AGG | + | chr4_1:52430992-52431011 | None:intergenic | 45.0% | |
| !! | CCTTGGTTCTTTTACAGGAC+TGG | - | chr4_1:52430989-52431008 | Msa0554740:intron | 45.0% |
| TAGGTCGAGATTGCATGTGT+TGG | - | chr4_1:52431421-52431440 | Msa0554740:intron | 45.0% | |
| AGGTCGAGATTGCATGTGTT+GGG | - | chr4_1:52431422-52431441 | Msa0554740:intron | 45.0% | |
| TTGCATGTGTTGGGATGGAT+AGG | - | chr4_1:52431431-52431450 | Msa0554740:intron | 45.0% | |
| TGTTGGGATGGATAGGCATA+AGG | - | chr4_1:52431438-52431457 | Msa0554740:intron | 45.0% | |
| TTCTCTCGACTCTGCTTGTT+TGG | - | chr4_1:52431471-52431490 | Msa0554740:intron | 45.0% | |
| AGCTGGCACATTATCGTACT+TGG | - | chr4_1:52431830-52431849 | Msa0554740:CDS | 45.0% | |
| TGCTCCGAAAGAGAAACTTC+TGG | - | chr4_1:52432065-52432084 | Msa0554740:intron | 45.0% | |
| CCAAACCCATTCATTCCACA+AGG | + | chr4_1:52432098-52432117 | None:intergenic | 45.0% | |
| ! | CCTTGTGGAATGAATGGGTT+TGG | - | chr4_1:52432095-52432114 | Msa0554740:intron | 45.0% |
| AAGAACTTGTCAGGGAGAGA+TGG | - | chr4_1:52432346-52432365 | Msa0554740:intron | 45.0% | |
| CCAGTCCAGCATCAGTAATT+TGG | + | chr4_1:52432700-52432719 | None:intergenic | 45.0% | |
| CCAAATTACTGATGCTGGAC+TGG | - | chr4_1:52432697-52432716 | Msa0554740:intron | 45.0% | |
| CATGGGAACACATACTTGCA+AGG | + | chr4_1:52432727-52432746 | None:intergenic | 45.0% | |
| TGAGCTAAGGCTTAAGGAGT+TGG | + | chr4_1:52432907-52432926 | None:intergenic | 45.0% | |
| ! | GATTGGTTGGGTAGCTCAAT+TGG | + | chr4_1:52432932-52432951 | None:intergenic | 45.0% |
| CCTTGAAACAGGAGCTCAAT+TGG | + | chr4_1:52432993-52433012 | None:intergenic | 45.0% | |
| CCAATTGAGCTCCTGTTTCA+AGG | - | chr4_1:52432990-52433009 | Msa0554740:intron | 45.0% | |
| !!! | TGTTCAGCCTCTGGTTTTCT+AGG | - | chr4_1:52433331-52433350 | Msa0554740:intron | 45.0% |
| TTTGCTGATGCAGGTTTGAC+TGG | - | chr4_1:52433389-52433408 | Msa0554740:intron | 45.0% | |
| !! | ACCTTGATTTGTTTGGCGCT+AGG | - | chr4_1:52433420-52433439 | Msa0554740:intron | 45.0% |
| TCCTAGCGCCAAACAAATCA+AGG | + | chr4_1:52433424-52433443 | None:intergenic | 45.0% | |
| GACAAATTTGACTGGGACAG+AGG | + | chr4_1:52433781-52433800 | None:intergenic | 45.0% | |
| AGGTCCTTGGAAATATGCAG+CGG | - | chr4_1:52434030-52434049 | Msa0554740:intron | 45.0% | |
| CAACCTTACGGACAAAACTG+TGG | - | chr4_1:52434128-52434147 | Msa0554740:intron | 45.0% | |
| !! | ACTCCACAGTTTTGTCCGTA+AGG | + | chr4_1:52434134-52434153 | None:intergenic | 45.0% |
| GTCATCTAAATTGCCAGGGT+TGG | - | chr4_1:52434479-52434498 | Msa0554740:exon | 45.0% | |
| AGACAATCACAAACCAACCC+TGG | + | chr4_1:52434495-52434514 | None:intergenic | 45.0% | |
| ! | AACGGACTTGGAAACAACTC+AGG | + | chr4_1:52434592-52434611 | None:intergenic | 45.0% |
| ! | CAACTCAGCTAAAACGGACT+TGG | + | chr4_1:52434604-52434623 | None:intergenic | 45.0% |
| GTTTCTCCGGTACTTTGTGT+AGG | - | chr4_1:52434635-52434654 | Msa0554740:intron | 45.0% | |
| CAACTGCCTACACAAAGTAC+CGG | + | chr4_1:52434644-52434663 | None:intergenic | 45.0% | |
| TAGGTCCTGGAGAATCATAC+CGG | - | chr4_1:52434810-52434829 | Msa0554740:intron | 45.0% | |
| TATAGCCGGTATGATTCTCC+AGG | + | chr4_1:52434818-52434837 | None:intergenic | 45.0% | |
| TCTGACGTTGGAGTCATGTA+AGG | - | chr4_1:52435052-52435071 | Msa0554740:intron | 45.0% | |
| GAAAGCTTACCAAGTTTGGG+AGG | + | chr4_1:52435115-52435134 | None:intergenic | 45.0% | |
| GCCGAAAGCTTACCAAGTTT+GGG | + | chr4_1:52435118-52435137 | None:intergenic | 45.0% | |
| !!! | TAAAATTAATGTTTAAATTT+TGG | - | chr4_1:52425282-52425301 | Msa0554740:CDS | 5.0% |
| !! | GAATATATAAAAAAAAAAAA+AGG | + | chr4_1:52432556-52432575 | None:intergenic | 5.0% |
| !!! | TTTTCATAATAAAAAATTAA+CGG | - | chr4_1:52434863-52434882 | Msa0554740:intron | 5.0% |
| GAAAAACCGCGAATGTGACG+TGG | + | chr4_1:52424920-52424939 | None:intergenic | 50.0% | |
| TGGACAATGTCCGTCACTGT+TGG | - | chr4_1:52425996-52426015 | Msa0554740:intron | 50.0% | |
| !! | CATGGACTGGAGTGTATCAG+TGG | - | chr4_1:52426901-52426920 | Msa0554740:CDS | 50.0% |
| GCACTTGTGTTTCAGTCCCT+TGG | - | chr4_1:52426988-52427007 | Msa0554740:intron | 50.0% | |
| ! | AGGGCACCAAGTCTTTAGGA+AGG | + | chr4_1:52427291-52427310 | None:intergenic | 50.0% |
| !! | AAATATGGGACTGGCCCTTC+TGG | + | chr4_1:52427314-52427333 | None:intergenic | 50.0% |
| TAAGCACGAGTCTTGGGACA+AGG | + | chr4_1:52427348-52427367 | None:intergenic | 50.0% | |
| TTGTCCCAAGACTCGTGCTT+AGG | - | chr4_1:52427347-52427366 | Msa0554740:intron | 50.0% | |
| TGTCCCAAGACTCGTGCTTA+GGG | - | chr4_1:52427348-52427367 | Msa0554740:intron | 50.0% | |
| ! | GGAGGGCTTCTATGCCTTTT+AGG | + | chr4_1:52427396-52427415 | None:intergenic | 50.0% |
| GGTCTTAGAGCCTTTCTGGA+GGG | + | chr4_1:52427413-52427432 | None:intergenic | 50.0% | |
| AGGTCTTAGAGCCTTTCTGG+AGG | + | chr4_1:52427414-52427433 | None:intergenic | 50.0% | |
| GCTTGGTTCCCAAGCAACAA+TGG | + | chr4_1:52427543-52427562 | None:intergenic | 50.0% | |
| CAAGGAATGAGTGCCTTCTC+TGG | - | chr4_1:52428428-52428447 | Msa0554740:intron | 50.0% | |
| GAGAGATGTCCTGGGATTCA+TGG | - | chr4_1:52428479-52428498 | Msa0554740:intron | 50.0% | |
| AGATGTCCTGGGATTCATGG+AGG | - | chr4_1:52428482-52428501 | Msa0554740:intron | 50.0% | |
| AGGGCAAGCTTCTGTAATCC+TGG | + | chr4_1:52429890-52429909 | None:intergenic | 50.0% | |
| GCTGTTGGAAATGGTAGTCG+GGG | - | chr4_1:52430495-52430514 | Msa0554740:intron | 50.0% | |
| ! | AGTTTGAGGGAGGAGTGCAA+GGG | + | chr4_1:52430551-52430570 | None:intergenic | 50.0% |
| GTGACAAGACAGTTTGAGGG+AGG | + | chr4_1:52430561-52430580 | None:intergenic | 50.0% | |
| ! | GAAGGATTGGTGAACTTGGC+AGG | - | chr4_1:52431312-52431331 | Msa0554740:intron | 50.0% |
| CGAGATTGCATGTGTTGGGA+TGG | - | chr4_1:52431426-52431445 | Msa0554740:intron | 50.0% | |
| TCCTATTGGGGCTCACCATT+TGG | - | chr4_1:52432175-52432194 | Msa0554740:intron | 50.0% | |
| CTTAAGGAGTTGGAGGTCCT+GGG | + | chr4_1:52432897-52432916 | None:intergenic | 50.0% | |
| GCTAAGGCTTAAGGAGTTGG+AGG | + | chr4_1:52432904-52432923 | None:intergenic | 50.0% | |
| GCAGAAGCCTAGAAAACCAG+AGG | + | chr4_1:52433341-52433360 | None:intergenic | 50.0% | |
| GCGCTAGGATCACAGATGTT+GGG | - | chr4_1:52433435-52433454 | Msa0554740:CDS | 50.0% | |
| TCCTTGGAAATATGCAGCGG+TGG | - | chr4_1:52434033-52434052 | Msa0554740:intron | 50.0% | |
| TCCACCGCTGCATATTTCCA+AGG | + | chr4_1:52434037-52434056 | None:intergenic | 50.0% | |
| GCATGCAACGACAATGTGTC+AGG | - | chr4_1:52434531-52434550 | Msa0554740:five_prime_UTR | 50.0% | |
| AAACACCAGCAGAAAGCAGG+CGG | + | chr4_1:52434568-52434587 | None:intergenic | 50.0% | |
| GGTAAACACCAGCAGAAAGC+AGG | + | chr4_1:52434571-52434590 | None:intergenic | 50.0% | |
| CAAATGCTGCAGTCCAGTAG+AGG | + | chr4_1:52435009-52435028 | None:intergenic | 50.0% | |
| GGCCGAAAGCTTACCAAGTT+TGG | + | chr4_1:52435119-52435138 | None:intergenic | 50.0% | |
| AACGAGCCACGTCACATTCG+CGG | - | chr4_1:52424911-52424930 | Msa0554740:three_prime_UTR | 55.0% | |
| CGTGTTCGAGGAAGCAAGAG+CGG | - | chr4_1:52425860-52425879 | Msa0554740:intron | 55.0% | |
| GTGTTCGAGGAAGCAAGAGC+GGG | - | chr4_1:52425861-52425880 | Msa0554740:intron | 55.0% | |
| !! | CTGGAGGGCACCAAGTCTTT+AGG | + | chr4_1:52427295-52427314 | None:intergenic | 55.0% |
| !! | AAGACTTGGTGCCCTCCAGA+AGG | - | chr4_1:52427296-52427315 | Msa0554740:intron | 55.0% |
| !! | AGACTTGGTGCCCTCCAGAA+GGG | - | chr4_1:52427297-52427316 | Msa0554740:intron | 55.0% |
| GTCCCAAGACTCGTGCTTAG+GGG | - | chr4_1:52427349-52427368 | Msa0554740:intron | 55.0% | |
| TCCCAAGACTCGTGCTTAGG+GGG | - | chr4_1:52427350-52427369 | Msa0554740:intron | 55.0% | |
| GGCATAGAAGCCCTCCAGAA+AGG | - | chr4_1:52427400-52427419 | Msa0554740:intron | 55.0% | |
| CCTGCTATGGGCTTGGGTTT+CGG | + | chr4_1:52427568-52427587 | None:intergenic | 55.0% | |
| ACAGTGCCTCCATGAATCCC+AGG | + | chr4_1:52428491-52428510 | None:intergenic | 55.0% | |
| TTTCTCGGGTGGGAGAGTAG+TGG | - | chr4_1:52430316-52430335 | Msa0554740:intron | 55.0% | |
| TTCTCGGGTGGGAGAGTAGT+GGG | - | chr4_1:52430317-52430336 | Msa0554740:intron | 55.0% | |
| !! | TATTGGGGGCGCCCCAATAT+TGG | + | chr4_1:52430386-52430405 | None:intergenic | 55.0% |
| ! | CAGTTTGAGGGAGGAGTGCA+AGG | + | chr4_1:52430552-52430571 | None:intergenic | 55.0% |
| TTTGACAGTGCAGGGAGCTC+TGG | + | chr4_1:52430785-52430804 | None:intergenic | 55.0% | |
| GCCAAATGGTGAGCCCCAAT+AGG | + | chr4_1:52432179-52432198 | None:intergenic | 55.0% | |
| CCTGGGTTCAAACCCGGAAA+AGG | + | chr4_1:52432880-52432899 | None:intergenic | 55.0% | |
| ! | CCTTTTCCGGGTTTGAACCC+AGG | - | chr4_1:52432877-52432896 | Msa0554740:intron | 55.0% |
| GCTTAAGGAGTTGGAGGTCC+TGG | + | chr4_1:52432898-52432917 | None:intergenic | 55.0% | |
| GGCGCTAGGATCACAGATGT+TGG | - | chr4_1:52433434-52433453 | Msa0554740:CDS | 55.0% | |
| !! | AGCGGTGGATTGACTGATGC+TGG | - | chr4_1:52434048-52434067 | Msa0554740:intron | 55.0% |
| AATTTCAGGGCTCACCGCGT+TGG | - | chr4_1:52434953-52434972 | Msa0554740:intron | 55.0% | |
| GGTAAGCTTTCGGCCAGAGT+AGG | - | chr4_1:52435124-52435143 | Msa0554740:intron | 55.0% | |
| AAGCTTTCGGCCAGAGTAGG+TGG | - | chr4_1:52435127-52435146 | Msa0554740:intron | 55.0% | |
| TTCGGCCAGAGTAGGTGGTT+TGG | - | chr4_1:52435132-52435151 | Msa0554740:intron | 55.0% | |
| TCGGCCAGAGTAGGTGGTTT+GGG | - | chr4_1:52435133-52435152 | Msa0554740:intron | 55.0% | |
| !! | ATGGGACTGGCCCTTCTGGA+GGG | + | chr4_1:52427310-52427329 | None:intergenic | 60.0% |
| !! | TATGGGACTGGCCCTTCTGG+AGG | + | chr4_1:52427311-52427330 | None:intergenic | 60.0% |
| GCCCCCTAAGCACGAGTCTT+GGG | + | chr4_1:52427354-52427373 | None:intergenic | 60.0% | |
| AGCCCCCTAAGCACGAGTCT+TGG | + | chr4_1:52427355-52427374 | None:intergenic | 60.0% | |
| GGGCGCCTAAGCCTTTCTAG+AGG | + | chr4_1:52427434-52427453 | None:intergenic | 60.0% | |
| CAAAGCCTCAGGAGCCCTTC+TGG | + | chr4_1:52427458-52427477 | None:intergenic | 60.0% | |
| CAGAAGGGCTCCTGAGGCTT+TGG | - | chr4_1:52427456-52427475 | Msa0554740:intron | 60.0% | |
| TTTAGAAGGGCGGCGCCCTA+AGG | + | chr4_1:52427490-52427509 | None:intergenic | 60.0% | |
| GGGCTTGGGTTTCGGTTGCT+TGG | + | chr4_1:52427560-52427579 | None:intergenic | 60.0% | |
| CCGAAACCCAAGCCCATAGC+AGG | - | chr4_1:52427565-52427584 | Msa0554740:intron | 60.0% | |
| ! | TGAGGGAGGAGTGCAAGGGT+TGG | + | chr4_1:52430547-52430566 | None:intergenic | 60.0% |
| GGAGGTCCTGGGTTCAAACC+CGG | + | chr4_1:52432886-52432905 | None:intergenic | 60.0% | |
| GCAGAAAGCAGGCGGCTCAA+TGG | + | chr4_1:52434560-52434579 | None:intergenic | 60.0% | |
| TTGAGCCGCCTGCTTTCTGC+TGG | - | chr4_1:52434560-52434579 | Msa0554740:five_prime_UTR | 60.0% | |
| GCAGCCCAAACCACCTACTC+TGG | + | chr4_1:52435140-52435159 | None:intergenic | 60.0% | |
| CGATGGGTGGTGCGTGTTCG+AGG | - | chr4_1:52425848-52425867 | Msa0554740:intron | 65.0% | |
| AGGCTTAGGCGCCCTCCAGA+AGG | - | chr4_1:52427440-52427459 | Msa0554740:intron | 65.0% | |
| GGCTTAGGCGCCCTCCAGAA+GGG | - | chr4_1:52427441-52427460 | Msa0554740:intron | 65.0% | |
| GCCTCAGGAGCCCTTCTGGA+GGG | + | chr4_1:52427454-52427473 | None:intergenic | 65.0% | |
| AGCCTCAGGAGCCCTTCTGG+AGG | + | chr4_1:52427455-52427474 | None:intergenic | 65.0% | |
| GCTTTGGCGCGCTCGCCTTA+GGG | - | chr4_1:52427472-52427491 | Msa0554740:intron | 65.0% | |
| GCCCTCCAGAAGGGCTCCTG+AGG | - | chr4_1:52427450-52427469 | Msa0554740:intron | 70.0% | |
| ! | GGCTTTGGCGCGCTCGCCTT+AGG | - | chr4_1:52427471-52427490 | Msa0554740:intron | 70.0% |
| GGCGAGCGCGCCAAAGCCTC+AGG | + | chr4_1:52427469-52427488 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 52424908 | 52435435 | 52424908 | ID=Msa0554740;Name=Msa0554740 |
| chr4_1 | mRNA | 52424908 | 52435435 | 52424908 | ID=Msa0554740-mRNA-1;Parent=Msa0554740;Name=Msa0554740-mRNA-1;_AED=0.26;_eAED=0.26;_QI=315|0.92|1|1|0.92|0.86|15|290|534 |
| chr4_1 | exon | 52424908 | 52425382 | 52424908 | ID=Msa0554740-mRNA-1:exon:15156;Parent=Msa0554740-mRNA-1 |
| chr4_1 | exon | 52426181 | 52426327 | 52426181 | ID=Msa0554740-mRNA-1:exon:15155;Parent=Msa0554740-mRNA-1 |
| chr4_1 | exon | 52426870 | 52426941 | 52426870 | ID=Msa0554740-mRNA-1:exon:15154;Parent=Msa0554740-mRNA-1 |
| chr4_1 | exon | 52427612 | 52427755 | 52427612 | ID=Msa0554740-mRNA-1:exon:15153;Parent=Msa0554740-mRNA-1 |
| chr4_1 | exon | 52428317 | 52428388 | 52428317 | ID=Msa0554740-mRNA-1:exon:15152;Parent=Msa0554740-mRNA-1 |
| chr4_1 | exon | 52429010 | 52429081 | 52429010 | ID=Msa0554740-mRNA-1:exon:15151;Parent=Msa0554740-mRNA-1 |
| chr4_1 | exon | 52429266 | 52429337 | 52429266 | ID=Msa0554740-mRNA-1:exon:15150;Parent=Msa0554740-mRNA-1 |
| chr4_1 | exon | 52429486 | 52429557 | 52429486 | ID=Msa0554740-mRNA-1:exon:15149;Parent=Msa0554740-mRNA-1 |
| chr4_1 | exon | 52430381 | 52430452 | 52430381 | ID=Msa0554740-mRNA-1:exon:15148;Parent=Msa0554740-mRNA-1 |
| chr4_1 | exon | 52431010 | 52431081 | 52431010 | ID=Msa0554740-mRNA-1:exon:15147;Parent=Msa0554740-mRNA-1 |
| chr4_1 | exon | 52431512 | 52431586 | 52431512 | ID=Msa0554740-mRNA-1:exon:15146;Parent=Msa0554740-mRNA-1 |
| chr4_1 | exon | 52431822 | 52431968 | 52431822 | ID=Msa0554740-mRNA-1:exon:15145;Parent=Msa0554740-mRNA-1 |
| chr4_1 | exon | 52433421 | 52433628 | 52433421 | ID=Msa0554740-mRNA-1:exon:15144;Parent=Msa0554740-mRNA-1 |
| chr4_1 | exon | 52434299 | 52434596 | 52434299 | ID=Msa0554740-mRNA-1:exon:15143;Parent=Msa0554740-mRNA-1 |
| chr4_1 | exon | 52435224 | 52435435 | 52435224 | ID=Msa0554740-mRNA-1:exon:15142;Parent=Msa0554740-mRNA-1 |
| chr4_1 | five_prime_UTR | 52435224 | 52435435 | 52435224 | ID=Msa0554740-mRNA-1:five_prime_utr;Parent=Msa0554740-mRNA-1 |
| chr4_1 | five_prime_UTR | 52434494 | 52434596 | 52434494 | ID=Msa0554740-mRNA-1:five_prime_utr;Parent=Msa0554740-mRNA-1 |
| chr4_1 | CDS | 52434299 | 52434493 | 52434299 | ID=Msa0554740-mRNA-1:cds;Parent=Msa0554740-mRNA-1 |
| chr4_1 | CDS | 52433421 | 52433628 | 52433421 | ID=Msa0554740-mRNA-1:cds;Parent=Msa0554740-mRNA-1 |
| chr4_1 | CDS | 52431822 | 52431968 | 52431822 | ID=Msa0554740-mRNA-1:cds;Parent=Msa0554740-mRNA-1 |
| chr4_1 | CDS | 52431512 | 52431586 | 52431512 | ID=Msa0554740-mRNA-1:cds;Parent=Msa0554740-mRNA-1 |
| chr4_1 | CDS | 52431010 | 52431081 | 52431010 | ID=Msa0554740-mRNA-1:cds;Parent=Msa0554740-mRNA-1 |
| chr4_1 | CDS | 52430381 | 52430452 | 52430381 | ID=Msa0554740-mRNA-1:cds;Parent=Msa0554740-mRNA-1 |
| chr4_1 | CDS | 52429486 | 52429557 | 52429486 | ID=Msa0554740-mRNA-1:cds;Parent=Msa0554740-mRNA-1 |
| chr4_1 | CDS | 52429266 | 52429337 | 52429266 | ID=Msa0554740-mRNA-1:cds;Parent=Msa0554740-mRNA-1 |
| chr4_1 | CDS | 52429010 | 52429081 | 52429010 | ID=Msa0554740-mRNA-1:cds;Parent=Msa0554740-mRNA-1 |
| chr4_1 | CDS | 52428317 | 52428388 | 52428317 | ID=Msa0554740-mRNA-1:cds;Parent=Msa0554740-mRNA-1 |
| chr4_1 | CDS | 52427612 | 52427755 | 52427612 | ID=Msa0554740-mRNA-1:cds;Parent=Msa0554740-mRNA-1 |
| chr4_1 | CDS | 52426870 | 52426941 | 52426870 | ID=Msa0554740-mRNA-1:cds;Parent=Msa0554740-mRNA-1 |
| chr4_1 | CDS | 52426181 | 52426327 | 52426181 | ID=Msa0554740-mRNA-1:cds;Parent=Msa0554740-mRNA-1 |
| chr4_1 | CDS | 52425198 | 52425382 | 52425198 | ID=Msa0554740-mRNA-1:cds;Parent=Msa0554740-mRNA-1 |
| chr4_1 | three_prime_UTR | 52424908 | 52425197 | 52424908 | ID=Msa0554740-mRNA-1:three_prime_utr;Parent=Msa0554740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
