AlfalfaGEDB | Msa0020420

M. sativa cultivar zhongmu-4 / Msa0020420

KEGG: K09338
GO: GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009628 GO:0009653 GO:0009664 GO:0009827 GO:0009888 GO:0009889 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0021700 GO:0022622 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042335 GO:0042545 GO:0043473 GO:0043476 GO:0043478 GO:0043479 GO:0043480 GO:0043481 GO:0045229 GO:0048364 GO:0048468 GO:0048469 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071840 GO:0080090 GO:0090558 GO:0090627 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000112 GO:2001141
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0020420	sp\|Q0WV12\|ANL2_ARATH	46.250	80	39	1	5	84	190	265	2.69e-15	72.8

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0003890	Msa0020420	0.802305	5.975035e-49	-8.615850e-47
Msa0006070	Msa0020420	0.803912	2.779941e-49	-8.615850e-47
Msa0011170	Msa0020420	0.816328	5.853570e-52	-8.615850e-47
Msa0014710	Msa0020420	0.809431	1.898956e-50	-8.615850e-47
Msa0015610	Msa0020420	0.808635	2.810660e-50	-8.615850e-47
Msa0017510	Msa0020420	0.811738	6.025570e-51	-8.615850e-47
Msa0020420	Msa0020930	0.811075	8.394267e-51	-8.615850e-47
Msa0020420	Msa0021510	0.802624	5.136038e-49	-8.615850e-47
Msa0020420	Msa0031340	0.812024	5.220473e-51	-8.615850e-47
Msa0020420	Msa0031710	0.817756	2.796471e-52	-8.615850e-47
Msa0020420	Msa0036140	0.808086	3.681298e-50	-8.615850e-47
Msa0020420	Msa0054480	0.800022	1.751557e-48	-8.615850e-47
Msa0020420	Msa0068680	0.805116	1.559135e-49	-8.615850e-47
Msa0020420	Msa0074700	0.810470	1.134608e-50	-8.615850e-47
Msa0020420	Msa0078900	0.816061	6.714527e-52	-8.615850e-47
Msa0020420	Msa0079070	0.805559	1.258945e-49	-8.615850e-47
Msa0020420	Msa0079380	0.807307	5.388945e-50	-8.615850e-47
Msa0020420	Msa0080090	0.801533	8.610275e-49	-8.615850e-47
Msa0020420	Msa0084080	0.806793	6.921318e-50	-8.615850e-47
Msa0020420	Msa0084380	0.804945	1.692678e-49	-8.615850e-47
Msa0020420	Msa0086760	0.834082	3.680574e-56	-8.615850e-47
Msa0020420	Msa0101700	0.802681	4.997914e-49	-8.615850e-47
Msa0020420	Msa0113250	0.800836	1.195394e-48	-8.615850e-47
Msa0020420	Msa0113790	0.807420	5.099106e-50	-8.615850e-47
Msa0020420	Msa0114060	0.846831	1.696205e-59	-8.615850e-47
Msa0020420	Msa0115270	0.802549	5.321575e-49	-8.615850e-47
Msa0020420	Msa0116770	0.801799	7.591431e-49	-8.615850e-47
Msa0020420	Msa0136070	0.805079	1.587352e-49	-8.615850e-47
Msa0020420	Msa0137100	0.802458	5.557843e-49	-8.615850e-47
Msa0020420	Msa0145440	0.807414	5.113071e-50	-8.615850e-47
Msa0020420	Msa0157290	0.811901	5.553157e-51	-8.615850e-47
Msa0020420	Msa0159930	0.820386	7.049742e-53	-8.615850e-47
Msa0020420	Msa0160550	0.813529	2.444590e-51	-8.615850e-47
Msa0020420	Msa0165210	0.800351	1.501276e-48	-8.615850e-47
Msa0020420	Msa0165220	0.813459	2.532301e-51	-8.615850e-47
Msa0020420	Msa0166870	0.801302	9.600378e-49	-8.615850e-47
Msa0020420	Msa0171540	0.806585	7.658375e-50	-8.615850e-47
Msa0020420	Msa0180500	0.839706	1.349313e-57	-8.615850e-47
Msa0020420	Msa0188830	0.812103	5.017819e-51	-8.615850e-47
Msa0020420	Msa0211150	0.804033	2.622887e-49	-8.615850e-47
Msa0020420	Msa0212990	0.827355	1.637935e-54	-8.615850e-47
Msa0020420	Msa0220580	0.806916	6.520534e-50	-8.615850e-47
Msa0020420	Msa0222890	0.801027	1.092976e-48	-8.615850e-47
Msa0020420	Msa0260680	0.804383	2.218442e-49	-8.615850e-47
Msa0020420	Msa0265380	0.801716	7.896768e-49	-8.615850e-47
Msa0020420	Msa0267370	0.803276	3.766346e-49	-8.615850e-47
Msa0020420	Msa0279220	0.803037	4.220037e-49	-8.615850e-47
Msa0020420	Msa0279240	0.801043	1.084366e-48	-8.615850e-47
Msa0020420	Msa0279700	0.801266	9.762348e-49	-8.615850e-47
Msa0020420	Msa0279790	0.800997	1.108367e-48	-8.615850e-47
Msa0020420	Msa0280090	0.827219	1.765095e-54	-8.615850e-47
Msa0020420	Msa0288100	0.832713	8.079588e-56	-8.615850e-47
Msa0020420	Msa0289250	0.817898	2.597525e-52	-8.615850e-47
Msa0020420	Msa0309770	0.837935	3.876106e-57	-8.615850e-47
Msa0020420	Msa0318980	0.828425	9.052927e-55	-8.615850e-47
Msa0020420	Msa0321860	0.802561	5.291979e-49	-8.615850e-47
Msa0020420	Msa0330340	0.822569	2.208548e-53	-8.615850e-47
Msa0020420	Msa0333030	0.808528	2.962478e-50	-8.615850e-47
Msa0020420	Msa0339250	0.808585	2.880902e-50	-8.615850e-47
Msa0020420	Msa0340450	0.830755	2.456234e-55	-8.615850e-47
Msa0020420	Msa0345970	0.853914	1.744134e-61	-8.615850e-47
Msa0020420	Msa0350990	0.824426	8.124618e-54	-8.615850e-47
Msa0020420	Msa0351030	0.825138	5.519660e-54	-8.615850e-47
Msa0020420	Msa0351100	0.824056	9.923206e-54	-8.615850e-47
Msa0020420	Msa0355220	0.818833	1.594489e-52	-8.615850e-47
Msa0020420	Msa0379640	0.809208	2.120049e-50	-8.615850e-47
Msa0020420	Msa0383800	0.807454	5.014841e-50	-8.615850e-47
Msa0020420	Msa0393080	0.810923	9.052206e-51	-8.615850e-47
Msa0020420	Msa0397750	0.814426	1.550181e-51	-8.615850e-47
Msa0020420	Msa0399340	0.801189	1.012626e-48	-8.615850e-47
Msa0020420	Msa0402290	0.823069	1.689297e-53	-8.615850e-47
Msa0020420	Msa0406880	0.805140	1.541577e-49	-8.615850e-47
Msa0020420	Msa0416650	0.811205	7.864597e-51	-8.615850e-47
Msa0020420	Msa0417270	0.822914	1.835877e-53	-8.615850e-47
Msa0020420	Msa0436760	0.803804	2.926151e-49	-8.615850e-47
Msa0020420	Msa0440400	0.801459	8.914833e-49	-8.615850e-47
Msa0020420	Msa0440750	0.842152	3.078411e-58	-8.615850e-47
Msa0020420	Msa0453330	0.800638	1.311892e-48	-8.615850e-47
Msa0020420	Msa0453640	0.800154	1.646209e-48	-8.615850e-47
Msa0020420	Msa0455040	0.820836	5.557314e-53	-8.615850e-47
Msa0020420	Msa0464680	0.809023	2.322007e-50	-8.615850e-47
Msa0020420	Msa0466120	0.820439	6.856919e-53	-8.615850e-47
Msa0020420	Msa0479970	0.811927	5.479370e-51	-8.615850e-47
Msa0020420	Msa0481530	0.819646	1.041198e-52	-8.615850e-47
Msa0020420	Msa0488560	0.801620	8.262742e-49	-8.615850e-47
Msa0020420	Msa0493630	0.804443	2.154679e-49	-8.615850e-47
Msa0020420	Msa0500360	0.820202	7.768201e-53	-8.615850e-47
Msa0020420	Msa0512750	0.809434	1.895603e-50	-8.615850e-47
Msa0020420	Msa0515010	0.845480	3.955030e-59	-8.615850e-47
Msa0020420	Msa0529890	0.810434	1.155013e-50	-8.615850e-47
Msa0020420	Msa0545700	0.811729	6.053406e-51	-8.615850e-47
Msa0020420	Msa0547320	0.803743	3.014083e-49	-8.615850e-47
Msa0020420	Msa0563840	0.816607	5.069147e-52	-8.615850e-47
Msa0020420	Msa0569500	0.804163	2.464691e-49	-8.615850e-47
Msa0020420	Msa0577500	0.817804	2.727459e-52	-8.615850e-47
Msa0020420	Msa0585230	0.827125	1.859564e-54	-8.615850e-47
Msa0020420	Msa0585300	0.801199	1.007570e-48	-8.615850e-47
Msa0020420	Msa0585560	0.821530	3.845124e-53	-8.615850e-47
Msa0020420	Msa0607050	0.801622	8.253701e-49	-8.615850e-47
Msa0020420	Msa0610430	0.805225	1.479162e-49	-8.615850e-47
Msa0020420	Msa0617640	0.813674	2.270906e-51	-8.615850e-47
Msa0020420	Msa0621490	0.821654	3.598644e-53	-8.615850e-47
Msa0020420	Msa0625720	0.814694	1.352346e-51	-8.615850e-47
Msa0020420	Msa0648880	0.809862	1.533913e-50	-8.615850e-47
Msa0020420	Msa0657970	0.818270	2.139249e-52	-8.615850e-47
Msa0020420	Msa0661190	-0.832609	8.574587e-56	-8.615850e-47
Msa0020420	Msa0661650	0.807179	5.734575e-50	-8.615850e-47
Msa0020420	Msa0663240	0.814752	1.312477e-51	-8.615850e-47
Msa0020420	Msa0663380	0.820640	6.165160e-53	-8.615850e-47
Msa0020420	Msa0663390	0.827623	1.412615e-54	-8.615850e-47
Msa0020420	Msa0669320	0.807798	4.238880e-50	-8.615850e-47
Msa0020420	Msa0672690	0.833220	6.042761e-56	-8.615850e-47
Msa0020420	Msa0682840	0.817593	3.042381e-52	-8.615850e-47
Msa0020420	Msa0688270	0.804732	1.875303e-49	-8.615850e-47
Msa0020420	Msa0688480	0.823095	1.665689e-53	-8.615850e-47
Msa0020420	Msa0691380	0.814035	1.891298e-51	-8.615850e-47
Msa0020420	Msa0692230	0.802102	6.579546e-49	-8.615850e-47
Msa0020420	Msa0693010	-0.805186	1.507123e-49	-8.615850e-47
Msa0020420	Msa0701900	0.818583	1.817460e-52	-8.615850e-47
Msa0020420	Msa0701920	0.804742	1.866320e-49	-8.615850e-47
Msa0020420	Msa0707250	0.806929	6.477441e-50	-8.615850e-47
Msa0020420	Msa0716840	0.830610	2.664759e-55	-8.615850e-47
Msa0020420	Msa0724210	0.805982	1.026365e-49	-8.615850e-47
Msa0020420	Msa0728630	0.807923	3.987337e-50	-8.615850e-47
Msa0020420	Msa0731940	0.815380	9.521067e-52	-8.615850e-47
Msa0020420	Msa0735170	0.808823	2.562543e-50	-8.615850e-47
Msa0020420	Msa0740510	0.800696	1.277019e-48	-8.615850e-47
Msa0020420	Msa0743720	0.817814	2.712128e-52	-8.615850e-47
Msa0020420	Msa0743950	0.807079	6.022575e-50	-8.615850e-47
Msa0020420	Msa0745790	0.836960	6.888637e-57	-8.615850e-47
Msa0020420	Msa0762970	0.822203	2.686427e-53	-8.615850e-47
Msa0020420	Msa0766630	0.800145	1.653377e-48	-8.615850e-47
Msa0020420	Msa0777230	0.802946	4.407678e-49	-8.615850e-47
Msa0020420	Msa0779320	0.805681	1.186855e-49	-8.615850e-47
Msa0020420	Msa0790510	0.809105	2.230561e-50	-8.615850e-47
Msa0020420	Msa0796700	0.818254	2.157110e-52	-8.615850e-47
Msa0020420	Msa0807470	0.825492	4.550268e-54	-8.615850e-47
Msa0020420	Msa0808270	0.803675	3.112319e-49	-8.615850e-47
Msa0020420	Msa0820770	0.810430	1.157293e-50	-8.615850e-47
Msa0020420	Msa0820850	0.800130	1.664908e-48	-8.615850e-47
Msa0020420	Msa0825340	0.801938	7.109330e-49	-8.615850e-47
Msa0020420	Msa0838380	0.815216	1.035548e-51	-8.615850e-47
Msa0020420	Msa0843260	0.800582	1.347110e-48	-8.615850e-47
Msa0020420	Msa0844450	0.812505	4.099604e-51	-8.615850e-47
Msa0020420	Msa0849030	0.806476	8.074696e-50	-8.615850e-47
Msa0020420	Msa0861090	0.804693	1.911258e-49	-8.615850e-47
Msa0020420	Msa0871270	0.820840	5.546453e-53	-8.615850e-47
Msa0020420	Msa0880140	0.806628	7.499188e-50	-8.615850e-47
Msa0020420	Msa0897330	0.831181	1.931260e-55	-8.615850e-47
Msa0020420	Msa0930390	0.800083	1.701823e-48	-8.615850e-47
Msa0020420	Msa0931520	0.817782	2.758803e-52	-8.615850e-47
Msa0020420	Msa0935670	0.811776	5.911535e-51	-8.615850e-47
Msa0020420	Msa0936300	0.804683	1.920457e-49	-8.615850e-47
Msa0020420	Msa0938220	0.837149	6.162933e-57	-8.615850e-47
Msa0020420	Msa0945970	0.811971	5.361110e-51	-8.615850e-47
Msa0020420	Msa0947660	0.814889	1.224275e-51	-8.615850e-47
Msa0020420	Msa0959360	0.829145	6.062017e-55	-8.615850e-47
Msa0020420	Msa0969520	0.809055	2.286196e-50	-8.615850e-47
Msa0020420	Msa0969810	0.823748	1.171791e-53	-8.615850e-47
Msa0020420	Msa0973100	0.803782	2.957562e-49	-8.615850e-47
Msa0020420	Msa0974070	0.815911	7.253087e-52	-8.615850e-47
Msa0020420	Msa0974080	0.809619	1.730239e-50	-8.615850e-47
Msa0020420	Msa0976670	0.814701	1.347589e-51	-8.615850e-47
Msa0020420	Msa1003620	0.820260	7.535064e-53	-8.615850e-47
Msa0020420	Msa1006660	0.804667	1.935296e-49	-8.615850e-47
Msa0020420	Msa1014540	0.840819	6.912044e-58	-8.615850e-47
Msa0020420	Msa1023950	0.822177	2.724012e-53	-8.615850e-47
Msa0020420	Msa1035480	0.803293	3.734875e-49	-8.615850e-47
Msa0020420	Msa1046460	0.814839	1.255784e-51	-8.615850e-47
Msa0020420	Msa1058710	0.811822	5.775255e-51	-8.615850e-47
Msa0020420	Msa1075220	-0.815454	9.169777e-52	-8.615850e-47
Msa0020420	Msa1075540	0.827322	1.667747e-54	-8.615850e-47
Msa0020420	Msa1075650	0.818340	2.063338e-52	-8.615850e-47
Msa0020420	Msa1082500	0.800296	1.540232e-48	-8.615850e-47
Msa0020420	Msa1083840	0.816018	6.865661e-52	-8.615850e-47
Msa0020420	Msa1089020	0.809726	1.641297e-50	-8.615850e-47
Msa0020420	Msa1104090	0.821038	4.993332e-53	-8.615850e-47
Msa0020420	Msa1113170	0.834052	3.744476e-56	-8.615850e-47
Msa0020420	Msa1116130	-0.818710	1.700683e-52	-8.615850e-47
Msa0020420	Msa1119480	0.813000	3.194274e-51	-8.615850e-47
Msa0020420	Msa1124960	0.808924	2.438209e-50	-8.615850e-47
Msa0020420	Msa1137570	0.835029	2.128014e-56	-8.615850e-47
Msa0020420	Msa1139000	-0.808369	3.203135e-50	-8.615850e-47
Msa0020420	Msa1142020	0.820908	5.350285e-53	-8.615850e-47
Msa0020420	Msa1154280	0.822866	1.883345e-53	-8.615850e-47
Msa0020420	Msa1162550	-0.820633	6.187650e-53	-8.615850e-47
Msa0020420	Msa1174040	0.833021	6.774577e-56	-8.615850e-47
Msa0020420	Msa1186950	-0.802955	4.387952e-49	-8.615850e-47
Msa0020420	Msa1194160	0.801845	7.429013e-49	-8.615850e-47
Msa0020420	Msa1203250	0.808543	2.941163e-50	-8.615850e-47
Msa0020420	Msa1204530	0.811910	5.526144e-51	-8.615850e-47
Msa0020420	Msa1225130	0.813775	2.157484e-51	-8.615850e-47
Msa0020420	Msa1226660	0.807568	4.742615e-50	-8.615850e-47
Msa0020420	Msa1228590	0.835423	1.692297e-56	-8.615850e-47
Msa0020420	Msa1233910	0.805347	1.394964e-49	-8.615850e-47
Msa0020420	Msa1238930	0.808273	3.358561e-50	-8.615850e-47
Msa0020420	Msa1246510	0.842413	2.624929e-58	-8.615850e-47
Msa0020420	Msa1249490	0.821110	4.804545e-53	-8.615850e-47
Msa0020420	Msa1253020	0.823417	1.401131e-53	-8.615850e-47
Msa0020420	Msa1256250	0.806923	6.497807e-50	-8.615850e-47
Msa0020420	Msa1277660	0.811862	5.661534e-51	-8.615850e-47
Msa0020420	Msa1283860	0.805134	1.545548e-49	-8.615850e-47
Msa0020420	Msa1284680	0.824098	9.702352e-54	-8.615850e-47
Msa0020420	Msa1287460	0.805957	1.038565e-49	-8.615850e-47
Msa0020420	Msa1296760	0.813715	2.224099e-51	-8.615850e-47
Msa0020420	Msa1297290	0.800220	1.596351e-48	-8.615850e-47
Msa0020420	Msa1305340	0.804831	1.788342e-49	-8.615850e-47
Msa0020420	Msa1306840	0.820183	7.847982e-53	-8.615850e-47
Msa0020420	Msa1318990	0.801113	1.049463e-48	-8.615850e-47
Msa0020420	Msa1331000	0.819417	1.174577e-52	-8.615850e-47
Msa0020420	Msa1340470	0.809559	1.782221e-50	-8.615850e-47
Msa0020420	Msa1359040	0.821290	4.367112e-53	-8.615850e-47
Msa0020420	Msa1360440	0.800110	1.680501e-48	-8.615850e-47
Msa0020420	Msa1372760	0.804439	2.159403e-49	-8.615850e-47
Msa0020420	Msa1373030	0.805389	1.366879e-49	-8.615850e-47
Msa0020420	Msa1374470	0.815146	1.073382e-51	-8.615850e-47
Msa0020420	Msa1384350	0.803674	3.113916e-49	-8.615850e-47
Msa0020420	Msa1385000	0.801544	8.562720e-49	-8.615850e-47
Msa0020420	Msa1386780	0.800093	1.693748e-48	-8.615850e-47
Msa0020420	Msa1390050	0.801566	8.478013e-49	-8.615850e-47
Msa0020420	Msa1392260	0.800848	1.188996e-48	-8.615850e-47
Msa0020420	Msa1397860	0.813269	2.787909e-51	-8.615850e-47
Msa0020420	Msa1399550	0.802643	5.090180e-49	-8.615850e-47
Msa0020420	Msa1400870	-0.806938	6.450541e-50	-8.615850e-47
Msa0020420	Msa1403340	0.804523	2.073966e-49	-8.615850e-47
Msa0020420	Msa1410100	0.830122	3.508410e-55	-8.615850e-47
Msa0020420	Msa1411020	0.819682	1.021756e-52	-8.615850e-47
Msa0020420	Msa1412640	0.811556	6.600564e-51	-8.615850e-47
Msa0020420	Msa1415910	0.802187	6.318418e-49	-8.615850e-47
Msa0020420	Msa1416150	0.801731	7.841101e-49	-8.615850e-47
Msa0020420	Msa1419960	0.811129	8.170713e-51	-8.615850e-47
Msa0020420	Msa1420490	0.805934	1.050230e-49	-8.615850e-47
Msa0020420	Msa1423390	0.804056	2.594199e-49	-8.615850e-47
Msa0020420	Msa1424290	0.812018	5.235866e-51	-8.615850e-47
Msa0020420	Msa1427230	0.808100	3.655401e-50	-8.615850e-47
Msa0020420	Msa1434350	0.813474	2.513155e-51	-8.615850e-47
Msa0020420	Msa1436650	0.813137	2.980150e-51	-8.615850e-47
Msa0020420	Msa1439320	0.812561	3.985230e-51	-8.615850e-47
Msa0020420	Msa1440370	0.807293	5.424785e-50	-8.615850e-47
Msa0020420	Msa1440810	0.804932	1.703988e-49	-8.615850e-47
Msa0020420	Msa1444440	0.803397	3.554909e-49	-8.615850e-47
Msa0020420	Msa1452240	0.819352	1.214876e-52	-8.615850e-47
Msa0020420	Msa1454120	0.819194	1.320334e-52	-8.615850e-47
Msa0020420	Msa1454620	0.817131	3.865923e-52	-8.615850e-47
Msa0020420	Msa1455490	0.801757	7.744200e-49	-8.615850e-47
Msa0020420	Msa1457240	0.813580	2.382222e-51	-8.615850e-47
Msa0020420	Msa1460830	0.815675	8.187572e-52	-8.615850e-47
Msa0020420	Msa1466540	0.815030	1.138940e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0020420	MtrunA17_Chr7g0246631	51.250	80	35	1	5	84	147	222	3.02e-17	75.1
Msa0020420	MtrunA17_Chr8g0350321	48.750	80	37	1	5	84	171	246	2.29e-16	72.8
Msa0020420	MtrunA17_Chr1g0203671	42.500	80	42	1	5	84	151	226	6.00e-14	65.9
Msa0020420	MtrunA17_Chr6g0472471	44.444	81	39	2	5	85	125	199	7.39e-13	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0020420	AT4G00730.1	46.250	80	39	1	5	84	190	265	2.73e-16	72.8
Msa0020420	AT4G00730.2	46.250	80	39	1	5	84	190	265	2.97e-16	72.8
Msa0020420	AT3G61150.1	46.250	80	39	1	5	84	166	241	8.21e-16	71.6
Msa0020420	AT5G52170.2	37.363	91	53	1	5	95	113	199	1.71e-11	59.3
Msa0020420	AT5G52170.3	37.363	91	53	1	5	95	113	199	1.94e-11	58.9
Msa0020420	AT5G52170.1	37.363	91	53	1	5	95	113	199	1.94e-11	58.9

Find 51 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGCTACACATTGTAAGAATT+TGG	0.115014	1_1:-35335175	Msa0020420:five_prime_UTR
GACAGAGTTTGTGCACTTTC+TGG	0.152436	1_1:-35333562	Msa0020420:CDS
TAAACACCTCAAAACCAAAT+TGG	0.213419	1_1:+35335752	None:intergenic
CCACCGTGCGGCTCCGATTC+TGG	0.220360	1_1:-35335620	Msa0020420:five_prime_UTR
CCCGTCTCTTGTTCCTTTGT+CGG	0.248912	1_1:+35334457	None:intergenic
ACTAACAGAATATCCCAATT+TGG	0.258384	1_1:-35335766	Msa0020420:five_prime_UTR
TGTTTGTCTGAGATCGTTCC+TGG	0.299666	1_1:-35335218	Msa0020420:five_prime_UTR
AGTCAGAGAAGTTTGAAATT+TGG	0.314997	1_1:-35335428	Msa0020420:five_prime_UTR
GCTACACATTGTAAGAATTT+GGG	0.338427	1_1:-35335174	Msa0020420:five_prime_UTR
TGGTTGAAATTGCTATAAAT+AGG	0.360277	1_1:-35335314	Msa0020420:five_prime_UTR
AATTGCTATAAATAGGTGTT+TGG	0.374168	1_1:-35335307	Msa0020420:five_prime_UTR
TCTGACTACAAAATCAAGAT+TGG	0.384014	1_1:+35335444	None:intergenic
TCAAGAGAATATGTCTAATC+AGG	0.386275	1_1:+35335131	None:intergenic
TGTCTAATCAGGATTCAAAA+AGG	0.390470	1_1:+35335142	None:intergenic
TGTGAATGAAATTTAGCATC+AGG	0.395238	1_1:-35335708	Msa0020420:five_prime_UTR
AAACACCTCAAAACCAAATT+GGG	0.433895	1_1:+35335753	None:intergenic
GAAATCTCACTAATAATAGT+TGG	0.456589	1_1:+35333637	None:intergenic
AAAACGCCATGCACCAGAAT+CGG	0.472982	1_1:+35335607	None:intergenic
AATTGAAAATGCTAGGTTGA+AGG	0.481602	1_1:-35333593	Msa0020420:CDS
ATCCTCCACGCATCTTTCCC+AGG	0.488443	1_1:+35335200	None:intergenic
CTGACTACAAAATCAAGATT+GGG	0.509068	1_1:+35335445	None:intergenic
TCCGACAAAGGAACAAGAGA+CGG	0.523267	1_1:-35334458	Msa0020420:CDS
TTGTCACAATTTGAACATGT+AGG	0.526784	1_1:+35333661	None:intergenic
GTGAATGAAATTTAGCATCA+GGG	0.528621	1_1:-35335707	Msa0020420:five_prime_UTR
GCGGCTCCGATTCTGGTGCA+TGG	0.541861	1_1:-35335613	Msa0020420:five_prime_UTR
AGAGAGTCGACAAGAGCAAG+AGG	0.547069	1_1:-35334500	Msa0020420:CDS
TCAATGTTTCCTGACAGCAT+TGG	0.557881	1_1:+35335394	None:intergenic
TTAGACATATTCTCTTGAGA+TGG	0.560674	1_1:-35335126	Msa0020420:five_prime_UTR
GATCTCAGACAAACAATCAA+AGG	0.567322	1_1:+35335226	None:intergenic
GTTTGTCTGAGATCGTTCCT+GGG	0.581994	1_1:-35335217	Msa0020420:five_prime_UTR
GTCTTCAAATTGAAAATGCT+AGG	0.584052	1_1:-35333600	Msa0020420:CDS
CCGACAAAGGAACAAGAGAC+GGG	0.589475	1_1:-35334457	Msa0020420:CDS
CTTATTTGATGAGATTGAGA+TGG	0.591562	1_1:-35333533	Msa0020420:CDS
TGGTGAAGGCAAGAAACAGA+AGG	0.611876	1_1:-35333513	Msa0020420:CDS
ACACATTGTAAGAATTTGGG+AGG	0.613467	1_1:-35335171	Msa0020420:five_prime_UTR
GATGGTGCTCATCGATGAGA+AGG	0.622187	1_1:-35335108	Msa0020420:intron
TGAATGAAATTTAGCATCAG+GGG	0.622534	1_1:-35335706	Msa0020420:five_prime_UTR
TGATGAGATTGAGATGGTGA+AGG	0.630063	1_1:-35333527	Msa0020420:CDS
TCGTTCCTGGGAAAGATGCG+TGG	0.643650	1_1:-35335205	Msa0020420:five_prime_UTR
AACAAGAGACGGGAAAACAC+CGG	0.651664	1_1:-35334447	Msa0020420:intron
GGAACTGCCACAAGGTATCG+AGG	0.659979	1_1:-35335513	Msa0020420:five_prime_UTR
GCACCAGAATCGGAGCCGCA+CGG	0.664634	1_1:+35335617	None:intergenic
AAAAGAGTACAATCCGACAA+AGG	0.664827	1_1:-35334470	Msa0020420:CDS
GGTGAAGGCAAGAAACAGAA+GGG	0.672932	1_1:-35333512	None:intergenic
ATTCTGTGGGAACTGCCACA+AGG	0.677764	1_1:-35335521	Msa0020420:five_prime_UTR
CCAGAATCGGAGCCGCACGG+TGG	0.683066	1_1:+35335620	None:intergenic
ACGGAAAACTCATTTGACGA+AGG	0.684179	1_1:-35334533	Msa0020420:CDS
CAAACTACCTCGATACCTTG+TGG	0.686876	1_1:+35335506	None:intergenic
TTCCTGGGAAAGATGCGTGG+AGG	0.701822	1_1:-35335202	Msa0020420:five_prime_UTR
AGACAGAGCTGCTGACACGA+AGG	0.703158	1_1:+35335363	None:intergenic
TTGATTGAAATTCCACCGTG+CGG	0.708191	1_1:-35335632	Msa0020420:five_prime_UTR

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ACAAACAATTTTTAAAAAAA+AGG	+	chr1_1:35334693-35334712	None:intergenic	10.0%
!!!	ACAAACAATTTTTAAAAAAA+AGG	+	chr1_1:35334693-35334712	None:intergenic	10.0%
!!!	TTTATTAGTTTAGTCTATAT+AGG	-	chr1_1:35334637-35334656	Msa0020420:intron	15.0%
!!	TTTAAATCTGAAAAAATAGT+AGG	+	chr1_1:35335338-35335357	None:intergenic	15.0%
!!!	TAATATGTTTCAGATATTTT+TGG	-	chr1_1:35335369-35335388	Msa0020420:five_prime_UTR	15.0%
!!	AGTATATAATATCTTTATGA+TGG	-	chr1_1:35335587-35335606	Msa0020420:five_prime_UTR	15.0%
!!!	TTTATTAGTTTAGTCTATAT+AGG	-	chr1_1:35334637-35334656	Msa0020420:intron	15.0%
!!	TTTAAATCTGAAAAAATAGT+AGG	+	chr1_1:35335338-35335357	None:intergenic	15.0%
!!!	TAATATGTTTCAGATATTTT+TGG	-	chr1_1:35335369-35335388	Msa0020420:five_prime_UTR	15.0%
!!	AGTATATAATATCTTTATGA+TGG	-	chr1_1:35335587-35335606	Msa0020420:five_prime_UTR	15.0%
!!!	GAAATCTGTTTTTGAATTTA+TGG	-	chr1_1:35334267-35334286	Msa0020420:intron	20.0%
!!!	AAATATAAAGAAGGTATTGT+TGG	+	chr1_1:35334928-35334947	None:intergenic	20.0%
!!	TCTATACCTTAAAATAATGT+GGG	+	chr1_1:35335040-35335059	None:intergenic	20.0%
!!	TTCTATACCTTAAAATAATG+TGG	+	chr1_1:35335041-35335060	None:intergenic	20.0%
!!!	TTTAGAGGTATTGTTAATAT+TGG	-	chr1_1:35335140-35335159	Msa0020420:five_prime_UTR	20.0%
!!!	AGTTGTTATTTGTTTTCTTT+TGG	-	chr1_1:35335194-35335213	Msa0020420:five_prime_UTR	20.0%
!!!	GTTGTTATTTGTTTTCTTTT+GGG	-	chr1_1:35335195-35335214	Msa0020420:five_prime_UTR	20.0%
!!	AAGCTATTATTTGGAAAATA+AGG	+	chr1_1:35335256-35335275	None:intergenic	20.0%
!!	TAAAGTTTAGAAAAATTGTG+AGG	+	chr1_1:35335285-35335304	None:intergenic	20.0%
!!!	CATTTGTGTTATCTTTTTAA+TGG	+	chr1_1:35335498-35335517	None:intergenic	20.0%
!!	ATATTATATACTCTAAGCTT+AGG	+	chr1_1:35335579-35335598	None:intergenic	20.0%
!!!	GAAATCTGTTTTTGAATTTA+TGG	-	chr1_1:35334267-35334286	Msa0020420:intron	20.0%
!!!	AAATATAAAGAAGGTATTGT+TGG	+	chr1_1:35334928-35334947	None:intergenic	20.0%
!!	TCTATACCTTAAAATAATGT+GGG	+	chr1_1:35335040-35335059	None:intergenic	20.0%
!!	TTCTATACCTTAAAATAATG+TGG	+	chr1_1:35335041-35335060	None:intergenic	20.0%
!!!	TTTAGAGGTATTGTTAATAT+TGG	-	chr1_1:35335140-35335159	Msa0020420:five_prime_UTR	20.0%
!!!	AGTTGTTATTTGTTTTCTTT+TGG	-	chr1_1:35335194-35335213	Msa0020420:five_prime_UTR	20.0%
!!!	GTTGTTATTTGTTTTCTTTT+GGG	-	chr1_1:35335195-35335214	Msa0020420:five_prime_UTR	20.0%
!!	AAGCTATTATTTGGAAAATA+AGG	+	chr1_1:35335256-35335275	None:intergenic	20.0%
!!	TAAAGTTTAGAAAAATTGTG+AGG	+	chr1_1:35335285-35335304	None:intergenic	20.0%
!!!	CATTTGTGTTATCTTTTTAA+TGG	+	chr1_1:35335498-35335517	None:intergenic	20.0%
!!	ATATTATATACTCTAAGCTT+AGG	+	chr1_1:35335579-35335598	None:intergenic	20.0%
!!!	TTGTTTTTGATCAAATTCTG+TGG	-	chr1_1:35333749-35333768	Msa0020420:intron	25.0%
!!!	TGTTTTTGATCAAATTCTGT+GGG	-	chr1_1:35333750-35333769	Msa0020420:intron	25.0%
!!!	CATTTTTCAATGGAGATTTT+GGG	+	chr1_1:35333811-35333830	None:intergenic	25.0%
!!!	TCATTTTTCAATGGAGATTT+TGG	+	chr1_1:35333812-35333831	None:intergenic	25.0%
!	TGGTTGAAATTGCTATAAAT+AGG	-	chr1_1:35333970-35333989	Msa0020420:intron	25.0%
!	AATTGCTATAAATAGGTGTT+TGG	-	chr1_1:35333977-35333996	Msa0020420:intron	25.0%
!	ATTTATCAATCTTTGTATGC+AGG	+	chr1_1:35334469-35334488	None:intergenic	25.0%
!!	GGATAATTTAAAACAGAACA+GGG	+	chr1_1:35334515-35334534	None:intergenic	25.0%
!!	TGGATAATTTAAAACAGAAC+AGG	+	chr1_1:35334516-35334535	None:intergenic	25.0%
!	ATGTGATTTATACATGAAGA+AGG	+	chr1_1:35334553-35334572	None:intergenic	25.0%
!!	ATTGTTTTCTTTGTTGAAGA+CGG	-	chr1_1:35334732-35334751	Msa0020420:intron	25.0%
!	ACCTTCTTTATATTTAGTTG+TGG	-	chr1_1:35334933-35334952	Msa0020420:intron	25.0%
!	ACCACAACTAAATATAAAGA+AGG	+	chr1_1:35334937-35334956	None:intergenic	25.0%
!!	GCTAAATTTTACTTCCAAAA+GGG	+	chr1_1:35335120-35335139	None:intergenic	25.0%
!!	AGCTAAATTTTACTTCCAAA+AGG	+	chr1_1:35335121-35335140	None:intergenic	25.0%
!!!	GAAGTAAAATTTAGCTTTAG+AGG	-	chr1_1:35335125-35335144	Msa0020420:five_prime_UTR	25.0%
!	AGGAAAGATAAGCTATTATT+TGG	+	chr1_1:35335265-35335284	None:intergenic	25.0%
!	ATTAAGAGTAAAGGTGAAAA+TGG	+	chr1_1:35335310-35335329	None:intergenic	25.0%
!	TAGGATGAAATTAAGAGTAA+AGG	+	chr1_1:35335319-35335338	None:intergenic	25.0%
!!!	AAGTTGATGTCATTTTTACA+TGG	-	chr1_1:35335519-35335538	Msa0020420:five_prime_UTR	25.0%
!!!	TTTACATGGTTTTATCTTTC+TGG	-	chr1_1:35335533-35335552	Msa0020420:five_prime_UTR	25.0%
!	GAAATCTCACTAATAATAGT+TGG	+	chr1_1:35335650-35335669	None:intergenic	25.0%
!!	TAGCATTTTCAATTTGAAGA+CGG	+	chr1_1:35335685-35335704	None:intergenic	25.0%
!!!	TTGTTTTTGATCAAATTCTG+TGG	-	chr1_1:35333749-35333768	Msa0020420:intron	25.0%
!!!	TGTTTTTGATCAAATTCTGT+GGG	-	chr1_1:35333750-35333769	Msa0020420:intron	25.0%
!!!	CATTTTTCAATGGAGATTTT+GGG	+	chr1_1:35333811-35333830	None:intergenic	25.0%
!!!	TCATTTTTCAATGGAGATTT+TGG	+	chr1_1:35333812-35333831	None:intergenic	25.0%
!	TGGTTGAAATTGCTATAAAT+AGG	-	chr1_1:35333970-35333989	Msa0020420:intron	25.0%
!	AATTGCTATAAATAGGTGTT+TGG	-	chr1_1:35333977-35333996	Msa0020420:intron	25.0%
!	ATTTATCAATCTTTGTATGC+AGG	+	chr1_1:35334469-35334488	None:intergenic	25.0%
!!	GGATAATTTAAAACAGAACA+GGG	+	chr1_1:35334515-35334534	None:intergenic	25.0%
!!	TGGATAATTTAAAACAGAAC+AGG	+	chr1_1:35334516-35334535	None:intergenic	25.0%
!	ATGTGATTTATACATGAAGA+AGG	+	chr1_1:35334553-35334572	None:intergenic	25.0%
!!	ATTGTTTTCTTTGTTGAAGA+CGG	-	chr1_1:35334732-35334751	Msa0020420:intron	25.0%
!	ACCTTCTTTATATTTAGTTG+TGG	-	chr1_1:35334933-35334952	Msa0020420:intron	25.0%
!	ACCACAACTAAATATAAAGA+AGG	+	chr1_1:35334937-35334956	None:intergenic	25.0%
!!	GCTAAATTTTACTTCCAAAA+GGG	+	chr1_1:35335120-35335139	None:intergenic	25.0%
!!	AGCTAAATTTTACTTCCAAA+AGG	+	chr1_1:35335121-35335140	None:intergenic	25.0%
!!!	GAAGTAAAATTTAGCTTTAG+AGG	-	chr1_1:35335125-35335144	Msa0020420:five_prime_UTR	25.0%
!	AGGAAAGATAAGCTATTATT+TGG	+	chr1_1:35335265-35335284	None:intergenic	25.0%
!	ATTAAGAGTAAAGGTGAAAA+TGG	+	chr1_1:35335310-35335329	None:intergenic	25.0%
!	TAGGATGAAATTAAGAGTAA+AGG	+	chr1_1:35335319-35335338	None:intergenic	25.0%
!!!	AAGTTGATGTCATTTTTACA+TGG	-	chr1_1:35335519-35335538	Msa0020420:five_prime_UTR	25.0%
!!!	TTTACATGGTTTTATCTTTC+TGG	-	chr1_1:35335533-35335552	Msa0020420:five_prime_UTR	25.0%
!	GAAATCTCACTAATAATAGT+TGG	+	chr1_1:35335650-35335669	None:intergenic	25.0%
!!	TAGCATTTTCAATTTGAAGA+CGG	+	chr1_1:35335685-35335704	None:intergenic	25.0%
	ACTAACAGAATATCCCAATT+TGG	-	chr1_1:35333518-35333537	Msa0020420:CDS	30.0%
!!!	AATATCCCAATTTGGTTTTG+AGG	-	chr1_1:35333526-35333545	Msa0020420:CDS	30.0%
	AAACACCTCAAAACCAAATT+GGG	+	chr1_1:35333534-35333553	None:intergenic	30.0%
	TAAACACCTCAAAACCAAAT+TGG	+	chr1_1:35333535-35333554	None:intergenic	30.0%
	TGTGAATGAAATTTAGCATC+AGG	-	chr1_1:35333576-35333595	Msa0020420:CDS	30.0%
	GTGAATGAAATTTAGCATCA+GGG	-	chr1_1:35333577-35333596	Msa0020420:CDS	30.0%
	TGAATGAAATTTAGCATCAG+GGG	-	chr1_1:35333578-35333597	Msa0020420:CDS	30.0%
!!!	GCGTTTTTTCTCTAATTTTC+TGG	-	chr1_1:35333693-35333712	Msa0020420:intron	30.0%
	CTCCATTGAAAAATGAAATG+CGG	-	chr1_1:35333816-35333835	Msa0020420:intron	30.0%
	CTGACTACAAAATCAAGATT+GGG	+	chr1_1:35333842-35333861	None:intergenic	30.0%
	TCTGACTACAAAATCAAGAT+TGG	+	chr1_1:35333843-35333862	None:intergenic	30.0%
!	AGTCAGAGAAGTTTGAAATT+TGG	-	chr1_1:35333856-35333875	Msa0020420:intron	30.0%
	AGAGAAAAACAATGGCAATT+CGG	+	chr1_1:35333951-35333970	None:intergenic	30.0%
	TTTCAACCAGAGAAAAACAA+TGG	+	chr1_1:35333959-35333978	None:intergenic	30.0%
	AGCTACACATTGTAAGAATT+TGG	-	chr1_1:35334109-35334128	Msa0020420:intron	30.0%
	GCTACACATTGTAAGAATTT+GGG	-	chr1_1:35334110-35334129	Msa0020420:intron	30.0%
	TAATCAGGATTCAAAAAGGT+TGG	+	chr1_1:35334141-35334160	None:intergenic	30.0%
	TGTCTAATCAGGATTCAAAA+AGG	+	chr1_1:35334145-35334164	None:intergenic	30.0%
	TCAAGAGAATATGTCTAATC+AGG	+	chr1_1:35334156-35334175	None:intergenic	30.0%
	TTAGACATATTCTCTTGAGA+TGG	-	chr1_1:35334158-35334177	Msa0020420:intron	30.0%
!	TTTGAAACAAAACATGAGCA+AGG	+	chr1_1:35334230-35334249	None:intergenic	30.0%
!!	TGGTCGTTTTGTTATGATTT+TGG	-	chr1_1:35334287-35334306	Msa0020420:intron	30.0%
!!	TATGATTTTGGTGAATTCGT+AGG	-	chr1_1:35334299-35334318	Msa0020420:intron	30.0%
!!	ATGATTTTGGTGAATTCGTA+GGG	-	chr1_1:35334300-35334319	Msa0020420:intron	30.0%
	AATCTTTGTATGCAGGATAT+GGG	+	chr1_1:35334462-35334481	None:intergenic	30.0%
!!	TAGGCTGAGTTATTTTGTAT+TGG	-	chr1_1:35334656-35334675	Msa0020420:intron	30.0%
!!	TTTTCGGTCAGTTTGATTTA+AGG	-	chr1_1:35334866-35334885	Msa0020420:intron	30.0%
!	TTTCGGTCAGTTTGATTTAA+GGG	-	chr1_1:35334867-35334886	Msa0020420:intron	30.0%
!!	GTTGTTCCCACATTATTTTA+AGG	-	chr1_1:35335031-35335050	Msa0020420:intron	30.0%
	ATAGACATGTCAATTGTTAG+GGG	+	chr1_1:35335168-35335187	None:intergenic	30.0%
	CATAGACATGTCAATTGTTA+GGG	+	chr1_1:35335169-35335188	None:intergenic	30.0%
	ACATAGACATGTCAATTGTT+AGG	+	chr1_1:35335170-35335189	None:intergenic	30.0%
	ACAATTGACATGTCTATGTT+CGG	-	chr1_1:35335171-35335190	Msa0020420:five_prime_UTR	30.0%
!!	GTTTTCTTTTGGGAATGAAA+TGG	-	chr1_1:35335205-35335224	Msa0020420:five_prime_UTR	30.0%
	AATGAAATGGTTTATCACCA+AGG	-	chr1_1:35335218-35335237	Msa0020420:five_prime_UTR	30.0%
!!!	TGTTTCAGATATTTTTGGCA+AGG	-	chr1_1:35335374-35335393	Msa0020420:five_prime_UTR	30.0%
!!	ATCTTTATGATGGATGCAAT+AGG	-	chr1_1:35335597-35335616	Msa0020420:five_prime_UTR	30.0%
	TTGTCACAATTTGAACATGT+AGG	+	chr1_1:35335626-35335645	None:intergenic	30.0%
	GTCTTCAAATTGAAAATGCT+AGG	-	chr1_1:35335684-35335703	Msa0020420:five_prime_UTR	30.0%
!	AATTGAAAATGCTAGGTTGA+AGG	-	chr1_1:35335691-35335710	Msa0020420:five_prime_UTR	30.0%
	CTTATTTGATGAGATTGAGA+TGG	-	chr1_1:35335751-35335770	Msa0020420:five_prime_UTR	30.0%
	ACTAACAGAATATCCCAATT+TGG	-	chr1_1:35333518-35333537	Msa0020420:CDS	30.0%
!!!	AATATCCCAATTTGGTTTTG+AGG	-	chr1_1:35333526-35333545	Msa0020420:CDS	30.0%
	AAACACCTCAAAACCAAATT+GGG	+	chr1_1:35333534-35333553	None:intergenic	30.0%
	TAAACACCTCAAAACCAAAT+TGG	+	chr1_1:35333535-35333554	None:intergenic	30.0%
	TGTGAATGAAATTTAGCATC+AGG	-	chr1_1:35333576-35333595	Msa0020420:CDS	30.0%
	GTGAATGAAATTTAGCATCA+GGG	-	chr1_1:35333577-35333596	Msa0020420:CDS	30.0%
	TGAATGAAATTTAGCATCAG+GGG	-	chr1_1:35333578-35333597	Msa0020420:CDS	30.0%
!!!	GCGTTTTTTCTCTAATTTTC+TGG	-	chr1_1:35333693-35333712	Msa0020420:intron	30.0%
	CTCCATTGAAAAATGAAATG+CGG	-	chr1_1:35333816-35333835	Msa0020420:intron	30.0%
	CTGACTACAAAATCAAGATT+GGG	+	chr1_1:35333842-35333861	None:intergenic	30.0%
	TCTGACTACAAAATCAAGAT+TGG	+	chr1_1:35333843-35333862	None:intergenic	30.0%
!	AGTCAGAGAAGTTTGAAATT+TGG	-	chr1_1:35333856-35333875	Msa0020420:intron	30.0%
	AGAGAAAAACAATGGCAATT+CGG	+	chr1_1:35333951-35333970	None:intergenic	30.0%
	TTTCAACCAGAGAAAAACAA+TGG	+	chr1_1:35333959-35333978	None:intergenic	30.0%
	AGCTACACATTGTAAGAATT+TGG	-	chr1_1:35334109-35334128	Msa0020420:intron	30.0%
	GCTACACATTGTAAGAATTT+GGG	-	chr1_1:35334110-35334129	Msa0020420:intron	30.0%
	TAATCAGGATTCAAAAAGGT+TGG	+	chr1_1:35334141-35334160	None:intergenic	30.0%
	TGTCTAATCAGGATTCAAAA+AGG	+	chr1_1:35334145-35334164	None:intergenic	30.0%
	TCAAGAGAATATGTCTAATC+AGG	+	chr1_1:35334156-35334175	None:intergenic	30.0%
	TTAGACATATTCTCTTGAGA+TGG	-	chr1_1:35334158-35334177	Msa0020420:intron	30.0%
!	TTTGAAACAAAACATGAGCA+AGG	+	chr1_1:35334230-35334249	None:intergenic	30.0%
!!	TGGTCGTTTTGTTATGATTT+TGG	-	chr1_1:35334287-35334306	Msa0020420:intron	30.0%
!!	TATGATTTTGGTGAATTCGT+AGG	-	chr1_1:35334299-35334318	Msa0020420:intron	30.0%
!!	ATGATTTTGGTGAATTCGTA+GGG	-	chr1_1:35334300-35334319	Msa0020420:intron	30.0%
	AATCTTTGTATGCAGGATAT+GGG	+	chr1_1:35334462-35334481	None:intergenic	30.0%
!!	TAGGCTGAGTTATTTTGTAT+TGG	-	chr1_1:35334656-35334675	Msa0020420:intron	30.0%
!!	TTTTCGGTCAGTTTGATTTA+AGG	-	chr1_1:35334866-35334885	Msa0020420:intron	30.0%
!	TTTCGGTCAGTTTGATTTAA+GGG	-	chr1_1:35334867-35334886	Msa0020420:intron	30.0%
!!	GTTGTTCCCACATTATTTTA+AGG	-	chr1_1:35335031-35335050	Msa0020420:intron	30.0%
	ATAGACATGTCAATTGTTAG+GGG	+	chr1_1:35335168-35335187	None:intergenic	30.0%
	CATAGACATGTCAATTGTTA+GGG	+	chr1_1:35335169-35335188	None:intergenic	30.0%
	ACATAGACATGTCAATTGTT+AGG	+	chr1_1:35335170-35335189	None:intergenic	30.0%
	ACAATTGACATGTCTATGTT+CGG	-	chr1_1:35335171-35335190	Msa0020420:five_prime_UTR	30.0%
!!	GTTTTCTTTTGGGAATGAAA+TGG	-	chr1_1:35335205-35335224	Msa0020420:five_prime_UTR	30.0%
	AATGAAATGGTTTATCACCA+AGG	-	chr1_1:35335218-35335237	Msa0020420:five_prime_UTR	30.0%
!!!	TGTTTCAGATATTTTTGGCA+AGG	-	chr1_1:35335374-35335393	Msa0020420:five_prime_UTR	30.0%
!!	ATCTTTATGATGGATGCAAT+AGG	-	chr1_1:35335597-35335616	Msa0020420:five_prime_UTR	30.0%
	TTGTCACAATTTGAACATGT+AGG	+	chr1_1:35335626-35335645	None:intergenic	30.0%
	GTCTTCAAATTGAAAATGCT+AGG	-	chr1_1:35335684-35335703	Msa0020420:five_prime_UTR	30.0%
!	AATTGAAAATGCTAGGTTGA+AGG	-	chr1_1:35335691-35335710	Msa0020420:five_prime_UTR	30.0%
	CTTATTTGATGAGATTGAGA+TGG	-	chr1_1:35335751-35335770	Msa0020420:five_prime_UTR	30.0%
!!	GAATTGCCATTGTTTTTCTC+TGG	-	chr1_1:35333950-35333969	Msa0020420:intron	35.0%
	GATCTCAGACAAACAATCAA+AGG	+	chr1_1:35334061-35334080	None:intergenic	35.0%
	ACACATTGTAAGAATTTGGG+AGG	-	chr1_1:35334113-35334132	Msa0020420:intron	35.0%
	AAAAAGAGCAACATCAAACC+TGG	+	chr1_1:35334385-35334404	None:intergenic	35.0%
	CAATCTTTGTATGCAGGATA+TGG	+	chr1_1:35334463-35334482	None:intergenic	35.0%
	TGAAGAAGGACAAATATGAG+AGG	+	chr1_1:35334539-35334558	None:intergenic	35.0%
	AGATTTCAACACTGAATGGA+TGG	+	chr1_1:35334610-35334629	None:intergenic	35.0%
	ATCGAGATTTCAACACTGAA+TGG	+	chr1_1:35334614-35334633	None:intergenic	35.0%
!	AAAAGAGTACAATCCGACAA+AGG	-	chr1_1:35334814-35334833	Msa0020420:intron	35.0%
!	AGGTATTGTTGGAGAAGAAA+GGG	+	chr1_1:35334917-35334936	None:intergenic	35.0%
!!	AAGGTATTGTTGGAGAAGAA+AGG	+	chr1_1:35334918-35334937	None:intergenic	35.0%
	CTATGACTAGAGGAACTATT+GGG	-	chr1_1:35334981-35335000	Msa0020420:intron	35.0%
!	CTTTCATCAAATAGCCCTTT+TGG	-	chr1_1:35335103-35335122	Msa0020420:intron	35.0%
!!!	GATATTTTTGGCAAGGATCA+TGG	-	chr1_1:35335381-35335400	Msa0020420:five_prime_UTR	35.0%
	CAATCTCTCTTTAACTCAGA+AGG	+	chr1_1:35335420-35335439	None:intergenic	35.0%
	CTGAGTTAAAGAGAGATTGT+CGG	-	chr1_1:35335421-35335440	Msa0020420:five_prime_UTR	35.0%
!!	GAATTGCCATTGTTTTTCTC+TGG	-	chr1_1:35333950-35333969	Msa0020420:intron	35.0%
	GATCTCAGACAAACAATCAA+AGG	+	chr1_1:35334061-35334080	None:intergenic	35.0%
	ACACATTGTAAGAATTTGGG+AGG	-	chr1_1:35334113-35334132	Msa0020420:intron	35.0%
	AAAAAGAGCAACATCAAACC+TGG	+	chr1_1:35334385-35334404	None:intergenic	35.0%
	CAATCTTTGTATGCAGGATA+TGG	+	chr1_1:35334463-35334482	None:intergenic	35.0%
	TGAAGAAGGACAAATATGAG+AGG	+	chr1_1:35334539-35334558	None:intergenic	35.0%
	AGATTTCAACACTGAATGGA+TGG	+	chr1_1:35334610-35334629	None:intergenic	35.0%
	ATCGAGATTTCAACACTGAA+TGG	+	chr1_1:35334614-35334633	None:intergenic	35.0%
!	AAAAGAGTACAATCCGACAA+AGG	-	chr1_1:35334814-35334833	Msa0020420:intron	35.0%
!	AGGTATTGTTGGAGAAGAAA+GGG	+	chr1_1:35334917-35334936	None:intergenic	35.0%
!!	AAGGTATTGTTGGAGAAGAA+AGG	+	chr1_1:35334918-35334937	None:intergenic	35.0%
	CTATGACTAGAGGAACTATT+GGG	-	chr1_1:35334981-35335000	Msa0020420:intron	35.0%
!	CTTTCATCAAATAGCCCTTT+TGG	-	chr1_1:35335103-35335122	Msa0020420:intron	35.0%
!!!	GATATTTTTGGCAAGGATCA+TGG	-	chr1_1:35335381-35335400	Msa0020420:five_prime_UTR	35.0%
	CAATCTCTCTTTAACTCAGA+AGG	+	chr1_1:35335420-35335439	None:intergenic	35.0%
	CTGAGTTAAAGAGAGATTGT+CGG	-	chr1_1:35335421-35335440	Msa0020420:five_prime_UTR	35.0%
	TTGATTGAAATTCCACCGTG+CGG	-	chr1_1:35333652-35333671	Msa0020420:CDS	40.0%
!!	GGCCGCATTTCATTTTTCAA+TGG	+	chr1_1:35333821-35333840	None:intergenic	40.0%
	TCAATGTTTCCTGACAGCAT+TGG	+	chr1_1:35333893-35333912	None:intergenic	40.0%
	TTGTATGCAGGATATGGGTT+GGG	+	chr1_1:35334457-35334476	None:intergenic	40.0%
	TTTGTATGCAGGATATGGGT+TGG	+	chr1_1:35334458-35334477	None:intergenic	40.0%
	AGAAGGACAAATATGAGAGG+TGG	+	chr1_1:35334536-35334555	None:intergenic	40.0%
	ACGGAAAACTCATTTGACGA+AGG	-	chr1_1:35334751-35334770	Msa0020420:intron	40.0%
!	AAAACACCGGTGGAGTTTTT+CGG	-	chr1_1:35334850-35334869	Msa0020420:intron	40.0%
	GGTATTGTTGGAGAAGAAAG+GGG	+	chr1_1:35334916-35334935	None:intergenic	40.0%
	AATGCTTCTGCTATGACTAG+AGG	-	chr1_1:35334971-35334990	Msa0020420:intron	40.0%
	GCTATGACTAGAGGAACTAT+TGG	-	chr1_1:35334980-35334999	Msa0020420:intron	40.0%
	AATGGTTTATCACCAAGGCA+AGG	-	chr1_1:35335223-35335242	Msa0020420:five_prime_UTR	40.0%
	TGATGAGATTGAGATGGTGA+AGG	-	chr1_1:35335757-35335776	Msa0020420:five_prime_UTR	40.0%
	TTGATTGAAATTCCACCGTG+CGG	-	chr1_1:35333652-35333671	Msa0020420:CDS	40.0%
!!	GGCCGCATTTCATTTTTCAA+TGG	+	chr1_1:35333821-35333840	None:intergenic	40.0%
	TCAATGTTTCCTGACAGCAT+TGG	+	chr1_1:35333893-35333912	None:intergenic	40.0%
	TTGTATGCAGGATATGGGTT+GGG	+	chr1_1:35334457-35334476	None:intergenic	40.0%
	TTTGTATGCAGGATATGGGT+TGG	+	chr1_1:35334458-35334477	None:intergenic	40.0%
	AGAAGGACAAATATGAGAGG+TGG	+	chr1_1:35334536-35334555	None:intergenic	40.0%
	ACGGAAAACTCATTTGACGA+AGG	-	chr1_1:35334751-35334770	Msa0020420:intron	40.0%
!	AAAACACCGGTGGAGTTTTT+CGG	-	chr1_1:35334850-35334869	Msa0020420:intron	40.0%
	GGTATTGTTGGAGAAGAAAG+GGG	+	chr1_1:35334916-35334935	None:intergenic	40.0%
	AATGCTTCTGCTATGACTAG+AGG	-	chr1_1:35334971-35334990	Msa0020420:intron	40.0%
	GCTATGACTAGAGGAACTAT+TGG	-	chr1_1:35334980-35334999	Msa0020420:intron	40.0%
	AATGGTTTATCACCAAGGCA+AGG	-	chr1_1:35335223-35335242	Msa0020420:five_prime_UTR	40.0%
	TGATGAGATTGAGATGGTGA+AGG	-	chr1_1:35335757-35335776	Msa0020420:five_prime_UTR	40.0%
	AAAACGCCATGCACCAGAAT+CGG	+	chr1_1:35333680-35333699	None:intergenic	45.0%
	CAAACTACCTCGATACCTTG+TGG	+	chr1_1:35333781-35333800	None:intergenic	45.0%
!	GATTTTGTGCCAATGCTGTC+AGG	-	chr1_1:35333881-35333900	Msa0020420:intron	45.0%
!	TGTTTGTCTGAGATCGTTCC+TGG	-	chr1_1:35334066-35334085	Msa0020420:intron	45.0%
!	GTTTGTCTGAGATCGTTCCT+GGG	-	chr1_1:35334067-35334086	Msa0020420:intron	45.0%
	TCAACATTAGCATCACCACC+AGG	-	chr1_1:35334364-35334383	Msa0020420:intron	45.0%
	AAGAGCAACATCAAACCTGG+TGG	+	chr1_1:35334382-35334401	None:intergenic	45.0%
!!	CAGGATATGGGTTGGGTTTA+TGG	+	chr1_1:35334450-35334469	None:intergenic	45.0%
	TCCGACAAAGGAACAAGAGA+CGG	-	chr1_1:35334826-35334845	Msa0020420:intron	45.0%
	AACAAGAGACGGGAAAACAC+CGG	-	chr1_1:35334837-35334856	Msa0020420:intron	45.0%
	AACTGACCGAAAAACTCCAC+CGG	+	chr1_1:35334859-35334878	None:intergenic	45.0%
	GGAACTATTGGGTTTGTGCA+TGG	-	chr1_1:35334992-35335011	Msa0020420:intron	45.0%
	TTTATCACCAAGGCAAGGAC+TGG	-	chr1_1:35335228-35335247	Msa0020420:five_prime_UTR	45.0%
	GACAGAGTTTGTGCACTTTC+TGG	-	chr1_1:35335722-35335741	Msa0020420:five_prime_UTR	45.0%
	TGGTGAAGGCAAGAAACAGA+AGG	-	chr1_1:35335771-35335790	Msa0020420:five_prime_UTR	45.0%
	AAAACGCCATGCACCAGAAT+CGG	+	chr1_1:35333680-35333699	None:intergenic	45.0%
	CAAACTACCTCGATACCTTG+TGG	+	chr1_1:35333781-35333800	None:intergenic	45.0%
!	GATTTTGTGCCAATGCTGTC+AGG	-	chr1_1:35333881-35333900	Msa0020420:intron	45.0%
!	TGTTTGTCTGAGATCGTTCC+TGG	-	chr1_1:35334066-35334085	Msa0020420:intron	45.0%
!	GTTTGTCTGAGATCGTTCCT+GGG	-	chr1_1:35334067-35334086	Msa0020420:intron	45.0%
	TCAACATTAGCATCACCACC+AGG	-	chr1_1:35334364-35334383	Msa0020420:intron	45.0%
	AAGAGCAACATCAAACCTGG+TGG	+	chr1_1:35334382-35334401	None:intergenic	45.0%
!!	CAGGATATGGGTTGGGTTTA+TGG	+	chr1_1:35334450-35334469	None:intergenic	45.0%
	TCCGACAAAGGAACAAGAGA+CGG	-	chr1_1:35334826-35334845	Msa0020420:intron	45.0%
	AACAAGAGACGGGAAAACAC+CGG	-	chr1_1:35334837-35334856	Msa0020420:intron	45.0%
	AACTGACCGAAAAACTCCAC+CGG	+	chr1_1:35334859-35334878	None:intergenic	45.0%
	GGAACTATTGGGTTTGTGCA+TGG	-	chr1_1:35334992-35335011	Msa0020420:intron	45.0%
	TTTATCACCAAGGCAAGGAC+TGG	-	chr1_1:35335228-35335247	Msa0020420:five_prime_UTR	45.0%
	GACAGAGTTTGTGCACTTTC+TGG	-	chr1_1:35335722-35335741	Msa0020420:five_prime_UTR	45.0%
	ATTCTGTGGGAACTGCCACA+AGG	-	chr1_1:35333763-35333782	Msa0020420:intron	50.0%
	GATGGTGCTCATCGATGAGA+AGG	-	chr1_1:35334176-35334195	Msa0020420:intron	50.0%
	AGAGAGTCGACAAGAGCAAG+AGG	-	chr1_1:35334784-35334803	Msa0020420:intron	50.0%
	CCCGTCTCTTGTTCCTTTGT+CGG	+	chr1_1:35334830-35334849	None:intergenic	50.0%
	CCGACAAAGGAACAAGAGAC+GGG	-	chr1_1:35334827-35334846	Msa0020420:intron	50.0%
	TAAGGATCCAGTCCTTGCCT+TGG	+	chr1_1:35335238-35335257	None:intergenic	50.0%
	ATTCTGTGGGAACTGCCACA+AGG	-	chr1_1:35333763-35333782	Msa0020420:intron	50.0%
	GATGGTGCTCATCGATGAGA+AGG	-	chr1_1:35334176-35334195	Msa0020420:intron	50.0%
	AGAGAGTCGACAAGAGCAAG+AGG	-	chr1_1:35334784-35334803	Msa0020420:intron	50.0%
	CCCGTCTCTTGTTCCTTTGT+CGG	+	chr1_1:35334830-35334849	None:intergenic	50.0%
	CCGACAAAGGAACAAGAGAC+GGG	-	chr1_1:35334827-35334846	Msa0020420:intron	50.0%
	TAAGGATCCAGTCCTTGCCT+TGG	+	chr1_1:35335238-35335257	None:intergenic	50.0%
!!	GGAACTGCCACAAGGTATCG+AGG	-	chr1_1:35333771-35333790	Msa0020420:intron	55.0%
	AGACAGAGCTGCTGACACGA+AGG	+	chr1_1:35333924-35333943	None:intergenic	55.0%
	TCGTTCCTGGGAAAGATGCG+TGG	-	chr1_1:35334079-35334098	Msa0020420:intron	55.0%
	TTCCTGGGAAAGATGCGTGG+AGG	-	chr1_1:35334082-35334101	Msa0020420:intron	55.0%
	ATCCTCCACGCATCTTTCCC+AGG	+	chr1_1:35334087-35334106	None:intergenic	55.0%
	AAGAGACGGGAAAACACCGG+TGG	-	chr1_1:35334840-35334859	Msa0020420:intron	55.0%
!!	GGAACTGCCACAAGGTATCG+AGG	-	chr1_1:35333771-35333790	Msa0020420:intron	55.0%
	AGACAGAGCTGCTGACACGA+AGG	+	chr1_1:35333924-35333943	None:intergenic	55.0%
	TCGTTCCTGGGAAAGATGCG+TGG	-	chr1_1:35334079-35334098	Msa0020420:intron	55.0%
	TTCCTGGGAAAGATGCGTGG+AGG	-	chr1_1:35334082-35334101	Msa0020420:intron	55.0%
	ATCCTCCACGCATCTTTCCC+AGG	+	chr1_1:35334087-35334106	None:intergenic	55.0%
	AAGAGACGGGAAAACACCGG+TGG	-	chr1_1:35334840-35334859	Msa0020420:intron	55.0%
	GCACCAGAATCGGAGCCGCA+CGG	+	chr1_1:35333670-35333689	None:intergenic	65.0%
	GCGGCTCCGATTCTGGTGCA+TGG	-	chr1_1:35333671-35333690	Msa0020420:intron	65.0%
	GCACCAGAATCGGAGCCGCA+CGG	+	chr1_1:35333670-35333689	None:intergenic	65.0%
	GCGGCTCCGATTCTGGTGCA+TGG	-	chr1_1:35333671-35333690	Msa0020420:intron	65.0%
	CCAGAATCGGAGCCGCACGG+TGG	+	chr1_1:35333667-35333686	None:intergenic	70.0%
	CCACCGTGCGGCTCCGATTC+TGG	-	chr1_1:35333664-35333683	Msa0020420:CDS	70.0%
	CCAGAATCGGAGCCGCACGG+TGG	+	chr1_1:35333667-35333686	None:intergenic	70.0%
	CCACCGTGCGGCTCCGATTC+TGG	-	chr1_1:35333664-35333683	Msa0020420:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_1	gene	35333513	35335793	35333513	ID=Msa0020420;Name=Msa0020420
chr1_1	mRNA	35333513	35335793	35333513	ID=Msa0020420-mRNA-1;Parent=Msa0020420;Name=Msa0020420-mRNA-1;_AED=0.33;_eAED=0.39;_QI=677\|0\|0.33\|1\|0\|0\|3\|0\|97
chr1_1	exon	35333513	35333687	35333513	ID=Msa0020420-mRNA-1:exon:11295;Parent=Msa0020420-mRNA-1
chr1_1	exon	35334448	35334555	35334448	ID=Msa0020420-mRNA-1:exon:11294;Parent=Msa0020420-mRNA-1
chr1_1	exon	35335109	35335793	35335109	ID=Msa0020420-mRNA-1:exon:11293;Parent=Msa0020420-mRNA-1
chr1_1	five_prime_UTR	35335117	35335793	35335117	ID=Msa0020420-mRNA-1:five_prime_utr;Parent=Msa0020420-mRNA-1
chr1_1	CDS	35335109	35335116	35335109	ID=Msa0020420-mRNA-1:cds;Parent=Msa0020420-mRNA-1
chr1_1	CDS	35334448	35334555	35334448	ID=Msa0020420-mRNA-1:cds;Parent=Msa0020420-mRNA-1
chr1_1	CDS	35333513	35333687	35333513	ID=Msa0020420-mRNA-1:cds;Parent=Msa0020420-mRNA-1

Gene Sequence	>Msa0020420 ATGAGAAGACGGAAAACTCATTTGACGAAGGACGCGAAAAAAGAGAGTCGACAAGAGCAAGAGGACGCTAGAAAAGAGTACAATCCGACAAAGGAACAAGAGACGGGAAAACACCGGAATCCTACATGTTCAAATTGTGACAATCCAACTATTATTAGTGAGATTTCACTAGAGCAACACCGTCTTCAAATTGAAAATGCTAGGTTGAAGGATAAGTTAGACAGAGTTTGTGCACTTTCTGGCACGCACTTATTTGATGAGATTGAGATGGTGAAGGCAAGAAACAGAAGG
Protein sequence	>Msa0020420 MRRRKTHLTKDAKKESRQEQEDARKEYNPTKEQETGKHRNPTCSNCDNPTIISEISLEQHRLQIENARLKDKLDRVCALSGTHLFDEIEMVKARNRR