AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0218590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0218590 MtrunA17_Chr2g0320641 86.542 483 26 3 1 483 1 444 0.0 815
Msa0218590 MtrunA17_Chr8g0380621 22.951 366 242 8 138 483 75 420 1.59e-18 87.8
Msa0218590 MtrunA17_Chr8g0384941 26.440 382 231 11 129 472 43 412 1.64e-15 78.6
Msa0218590 MtrunA17_Chr1g0187901 25.613 367 234 9 129 474 33 381 8.49e-15 76.3
Msa0218590 MtrunA17_Chr1g0165861 25.389 193 124 5 290 470 7 191 3.00e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0218590 AT5G22830.1 71.159 371 73 3 113 483 123 459 2.02e-172 493
Msa0218590 AT5G22830.2 71.159 371 73 3 113 483 123 459 2.02e-172 493
Msa0218590 AT5G09690.2 24.031 387 236 8 123 483 41 395 5.23e-20 92.4
Msa0218590 AT5G09690.1 24.031 387 236 8 123 483 30 384 5.28e-20 92.0
Msa0218590 AT5G09690.12 23.656 372 223 6 123 471 41 374 2.96e-18 87.0
Msa0218590 AT5G64560.1 25.538 372 231 10 136 482 41 391 1.26e-16 82.0
Msa0218590 AT1G80900.2 24.265 408 242 9 123 483 54 441 1.68e-15 79.0
Msa0218590 AT1G80900.1 24.265 408 242 9 123 483 54 441 1.68e-15 79.0
Msa0218590 AT1G16010.3 24.755 408 237 12 123 482 54 439 1.17e-14 76.3
Msa0218590 AT1G16010.1 24.755 408 237 12 123 482 54 439 1.17e-14 76.3
Msa0218590 AT1G16010.2 24.755 408 237 12 123 482 54 439 1.17e-14 76.3
Msa0218590 AT4G28580.1 20.161 372 238 10 137 483 70 407 4.41e-12 68.2

Find 163 sgRNAs with CRISPR-Local

Find 497 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATGATTTCAGGCATATT+TGG 0.179020 2_1:-65850420 Msa0218590:intron
GCAGATGCTGCTTGATCTTC+TGG 0.225940 2_1:-65852350 Msa0218590:CDS
AATACGGAGGATATGTATTA+TGG 0.232489 2_1:-65852314 Msa0218590:CDS
ACCACATCTGGGATTATTAT+TGG 0.241757 2_1:-65850240 Msa0218590:CDS
ATTTAATGCAGTTTGCATTT+TGG 0.259440 2_1:-65850266 Msa0218590:intron
ATGAATAATTTATCCGGATT+TGG 0.261474 2_1:+65856382 None:intergenic
TTCACTTTAGTTGATAATAT+TGG 0.271055 2_1:-65849345 Msa0218590:three_prime_UTR
GGCCCTCCATTGTTGCTCTT+GGG 0.287052 2_1:+65854475 None:intergenic
GCCTTACCAAATCGGATAAC+TGG 0.292260 2_1:-65852531 Msa0218590:CDS
TGGCCCTCCATTGTTGCTCT+TGG 0.305119 2_1:+65854474 None:intergenic
TACTTATATTTGATTATAAT+CGG 0.307648 2_1:-65854659 Msa0218590:intron
GCACTGAGCATTCCACATTA+TGG 0.309684 2_1:+65852263 None:intergenic
AGGATTGCAACCACCTCTTC+TGG 0.321443 2_1:-65855952 Msa0218590:CDS
TACCAACCTTGTTCCGTTCC+CGG 0.326223 2_1:-65856326 Msa0218590:five_prime_UTR
TCAATCTACGGAAATGGATT+TGG 0.328492 2_1:-65849648 Msa0218590:three_prime_UTR
AAATTCAATGCCTTCTTTGC+TGG 0.336908 2_1:-65855045 Msa0218590:intron
CTTAGAACCTCGTGTGAGTA+TGG 0.342447 2_1:-65853276 Msa0218590:CDS
CATATCCTCCGTATTTCATC+TGG 0.346335 2_1:+65852322 None:intergenic
GGAGGAAATTGAGATGCTTC+TGG 0.351803 2_1:-65852107 Msa0218590:CDS
TCGATTTCAAATGGCATTGA+TGG 0.352449 2_1:+65854454 None:intergenic
CCAAATTGCTAGGTTGAGTT+AGG 0.366760 2_1:-65852394 Msa0218590:intron
TCTTGATTCTGCAAGGGAAA+TGG 0.368944 2_1:-65851614 Msa0218590:CDS
ATATCCCCAGTTATCCGATT+TGG 0.369292 2_1:+65852525 None:intergenic
GGAATCAGACGCGACGGTTT+CGG 0.372599 2_1:+65856041 None:intergenic
ACTGCTTCACAGGTTCATAA+TGG 0.379206 2_1:-65849528 Msa0218590:intron
TCGGATAACTGGGGATATAC+TGG 0.379701 2_1:-65852520 Msa0218590:CDS
CGCTAGGTTGTTGCTTGTGT+GGG 0.382031 2_1:-65849471 Msa0218590:three_prime_UTR
AGAAATTGTACAATAAATAA+AGG 0.382181 2_1:-65852289 Msa0218590:CDS
CAAAGATCAATCTACGGAAA+TGG 0.393215 2_1:-65849654 Msa0218590:three_prime_UTR
GCTTTCAAGAATACAACGTT+TGG 0.393821 2_1:-65853315 Msa0218590:CDS
ACCATAATAAAACAGGTATC+TGG 0.398082 2_1:-65849213 Msa0218590:three_prime_UTR
ATCTGGCTCCATTAATTGTT+GGG 0.403216 2_1:-65849196 Msa0218590:three_prime_UTR
ATTCTATAGCTGTCAGTTTG+AGG 0.409615 2_1:-65851588 Msa0218590:intron
CCTAGCGAAGAGTCTCTTGA+TGG 0.410988 2_1:+65849487 None:intergenic
TCAGACGAAACTTCAAATAT+AGG 0.411397 2_1:-65850159 Msa0218590:intron
GCCCTCCATTGTTGCTCTTG+GGG 0.412124 2_1:+65854476 None:intergenic
TTTAATTTCTTCGTAAGGAT+TGG 0.415238 2_1:+65849252 None:intergenic
TTCTTGAGGCCTTACCAAAT+CGG 0.421971 2_1:-65852539 Msa0218590:CDS
ATAGAACGAACTTCATAAAC+AGG 0.428110 2_1:+65855901 None:intergenic
CACGGAGGCTTGAAGTTAGC+AGG 0.431686 2_1:-65851062 Msa0218590:CDS
GTTCCTCAAGATAGGACTTC+AGG 0.433942 2_1:+65850391 None:intergenic
AGTGGCGACGGTGGAGGTTA+CGG 0.436072 2_1:+65856291 None:intergenic
ATCCATGCACTGCGTGACTC+TGG 0.443866 2_1:+65849279 None:intergenic
TCGTATTAGCAAACAAACTT+TGG 0.451649 2_1:-65852490 Msa0218590:intron
AAATGCATGAATAATTTATC+CGG 0.456117 2_1:+65856376 None:intergenic
GTATGCTATACTTCTAAACT+TGG 0.456498 2_1:-65854715 Msa0218590:CDS
TATCTGGCTCCATTAATTGT+TGG 0.458068 2_1:-65849197 Msa0218590:three_prime_UTR
GTGCACAATCACTGCATTTG+TGG 0.458974 2_1:+65849676 None:intergenic
CAACAGACCTCGATTTCAAA+TGG 0.463876 2_1:+65854445 None:intergenic
TTATTCAGGTCTTCGTCCAC+GGG 0.464836 2_1:-65855102 Msa0218590:intron
CAGGGTGGAACTGCTTCTCC+AGG 0.465720 2_1:-65851043 Msa0218590:CDS
TTCTAGAGTCATTGCTGCCT+CGG 0.468702 2_1:-65854504 Msa0218590:CDS
TGCACAATCACTGCATTTGT+GGG 0.470159 2_1:+65849677 None:intergenic
CTCAGTGCCTTTAGACAAGC+AGG 0.471829 2_1:-65852248 Msa0218590:CDS
ATACGGAGGATATGTATTAT+GGG 0.472338 2_1:-65852313 Msa0218590:CDS
TCTTGTGAAAGTTTGAATGA+TGG 0.472966 2_1:-65849158 Msa0218590:three_prime_UTR
CATTTCACCGGCTTGAGCGC+AGG 0.474067 2_1:+65856105 None:intergenic
AATTATTTAATTTCTTCGTA+AGG 0.478443 2_1:+65849247 None:intergenic
AGATATTATACCAGCAAAGA+AGG 0.478493 2_1:+65855035 None:intergenic
CAAAATATGTACCTGCTACA+AGG 0.478564 2_1:+65850992 None:intergenic
GCAGTTGGTGCCCTTGTAGC+AGG 0.482970 2_1:-65851003 Msa0218590:intron
GATTTACACCATAATAAAAC+AGG 0.490449 2_1:-65849220 Msa0218590:three_prime_UTR
CCCAGTTATCCGATTTGGTA+AGG 0.493190 2_1:+65852530 None:intergenic
AAAGGTTGGAAGCGAAAGTG+AGG 0.504236 2_1:+65856231 None:intergenic
TTCATCATCAACAGCTTCAT+CGG 0.505527 2_1:+65856020 None:intergenic
ATTATTCAGGTCTTCGTCCA+CGG 0.515753 2_1:-65855103 Msa0218590:intron
TCGGTTTCAGCGTCGTTCCA+CGG 0.517395 2_1:+65856060 None:intergenic
TGCATGCCGGGAACGGAACA+AGG 0.518041 2_1:+65856320 None:intergenic
GTTGTAGAAGTGAAATCAGA+TGG 0.519105 2_1:-65855699 Msa0218590:CDS
TCGCTAGGTTGTTGCTTGTG+TGG 0.519298 2_1:-65849472 Msa0218590:three_prime_UTR
CCTTACCAAATCGGATAACT+GGG 0.519888 2_1:-65852530 Msa0218590:CDS
ACTTCTGAATTTAACTAACA+TGG 0.520719 2_1:-65856271 Msa0218590:exon
TCAGCAACCTGCTTGTCTAA+AGG 0.527323 2_1:+65852241 None:intergenic
GAAGAGGTGGTTGCAATCCT+CGG 0.527378 2_1:+65855955 None:intergenic
TTCTGGAAAATTATCTCCAA+AGG 0.529417 2_1:-65852090 Msa0218590:intron
TGGAGGACCCAGATGAAATA+CGG 0.529419 2_1:-65852330 Msa0218590:CDS
CACCACACGTTCCTCAAGAT+AGG 0.530197 2_1:+65850383 None:intergenic
GTCCAGAGTCACGCAGTGCA+TGG 0.530398 2_1:-65849281 Msa0218590:three_prime_UTR
GGAACATTCTGTGTGGCAGT+TGG 0.533059 2_1:-65851018 Msa0218590:CDS
CTCATGATATGTAGAGGAGG+AGG 0.534424 2_1:-65852128 Msa0218590:intron
AACGGAACAAGGTTGGTAGT+TGG 0.534970 2_1:+65856331 None:intergenic
GTGGATCTACTGCATTTCAC+CGG 0.543097 2_1:+65856093 None:intergenic
TTCAGAAGTGGCGACGGTGG+AGG 0.543793 2_1:+65856285 None:intergenic
AAAATATGTACCTGCTACAA+GGG 0.544963 2_1:+65850993 None:intergenic
AAAGGCTTCTTGATTCTGCA+AGG 0.546966 2_1:-65851621 Msa0218590:CDS
CGGTGAGGTCGGAGAAGAAG+AGG 0.549065 2_1:+65856190 None:intergenic
ATGATATGTAGAGGAGGAGG+AGG 0.550490 2_1:-65852125 Msa0218590:intron
CTTGTCACGGTCAAGCTGAA+AGG 0.554270 2_1:-65851639 Msa0218590:CDS
GTCGGAGAAGAAGAGGTAGT+TGG 0.555331 2_1:+65856197 None:intergenic
ATTCTCTCACTCTTCTTCGC+CGG 0.555446 2_1:-65856152 Msa0218590:CDS
GTGGAACTGCTTCTCCAGGT+TGG 0.558353 2_1:-65851039 Msa0218590:CDS
TCTGGAGATTCTCTATCGCT+CGG 0.560572 2_1:-65855934 Msa0218590:CDS
GTGAGAGAATCGTGGAATTG+TGG 0.560861 2_1:+65856165 None:intergenic
GTTGAGTTAGGCTCAAGGGC+AGG 0.569703 2_1:-65852382 Msa0218590:CDS
TTTAGACAAGCAGGTTGCTG+AGG 0.573002 2_1:-65852239 Msa0218590:CDS
TATGCTATACTTCTAAACTT+GGG 0.574188 2_1:-65854714 Msa0218590:CDS
TTAAACCCCAAGAGCAACAA+TGG 0.574463 2_1:-65854481 Msa0218590:CDS
ATCAATGCCATTTGAAATCG+AGG 0.574990 2_1:-65854452 Msa0218590:intron
ACCCCAAGAGCAACAATGGA+GGG 0.575827 2_1:-65854477 Msa0218590:CDS
ACATCTGGGATTATTATTGG+TGG 0.576146 2_1:-65850237 Msa0218590:CDS
CTAGGTTGAGTTAGGCTCAA+GGG 0.577286 2_1:-65852386 Msa0218590:intron
ATTGGTGTTGTATGATCAAG+TGG 0.578348 2_1:-65849327 Msa0218590:three_prime_UTR
TAGTTGGTGCGCGTGAGGAA+AGG 0.579052 2_1:+65856213 None:intergenic
AGTGTAAAAGACGACGCAGA+AGG 0.580230 2_1:-65853730 Msa0218590:CDS
ATGTTAGTTAAATTCAGAAG+TGG 0.580810 2_1:+65856273 None:intergenic
GCTAGGTTGAGTTAGGCTCA+AGG 0.583177 2_1:-65852387 Msa0218590:intron
CAAGAATACAACGTTTGGAG+CGG 0.585508 2_1:-65853310 Msa0218590:CDS
ACGTTTGGAGCGGAGACTGA+TGG 0.587474 2_1:-65853300 Msa0218590:CDS
ACCAATAATAATCCCAGATG+TGG 0.587896 2_1:+65850239 None:intergenic
GAGCGCAGGCGATGATGTAA+CGG 0.588365 2_1:+65856119 None:intergenic
TGCCGGGAACGGAACAAGGT+TGG 0.588656 2_1:+65856324 None:intergenic
AACTTTCACAAGAACTCGGT+AGG 0.589539 2_1:+65849168 None:intergenic
GAATTGTGGTTCGGTGAGGT+CGG 0.590714 2_1:+65856179 None:intergenic
AGAGGTAGTTGGTGCGCGTG+AGG 0.591230 2_1:+65856208 None:intergenic
ATCATCGCCTGCGCTCAAGC+CGG 0.591808 2_1:-65856112 Msa0218590:CDS
CCACACAGAATGTTCCAACC+TGG 0.592527 2_1:+65851025 None:intergenic
CCATCAAGAGACTCTTCGCT+AGG 0.592834 2_1:-65849487 Msa0218590:three_prime_UTR
CTAGGTTCAAGCTCTTCTTG+AGG 0.592984 2_1:-65852553 Msa0218590:intron
AAGGCTTCTTGATTCTGCAA+GGG 0.595349 2_1:-65851620 Msa0218590:CDS
GTTAAATTCAGAAGTGGCGA+CGG 0.598296 2_1:+65856279 None:intergenic
TGGTGCGCGTGAGGAAAGGT+TGG 0.598690 2_1:+65856217 None:intergenic
GACGCAGAAGGATCTAAAGA+TGG 0.601591 2_1:-65853718 Msa0218590:CDS
TGTGCACAAAGATCAATCTA+CGG 0.603651 2_1:-65849660 Msa0218590:three_prime_UTR
TTAGACAAGCAGGTTGCTGA+GGG 0.603811 2_1:-65852238 Msa0218590:intron
TTCAAACTTTCACAAGAACT+CGG 0.604203 2_1:+65849164 None:intergenic
TGTATAACTACCTCAGAGCA+AGG 0.605896 2_1:-65850194 Msa0218590:CDS
GAGTCACGCAGTGCATGGAT+CGG 0.611874 2_1:-65849276 Msa0218590:three_prime_UTR
AAATAAAGGAAACCATAATG+TGG 0.613910 2_1:-65852275 Msa0218590:CDS
AGACAATTATTGAAGTCTAG+TGG 0.615214 2_1:-65855648 Msa0218590:intron
TTTACATAAGAACTGCATGA+AGG 0.616048 2_1:-65849390 Msa0218590:three_prime_UTR
GATGCTGCTTGATCTTCTGG+AGG 0.616845 2_1:-65852347 Msa0218590:CDS
ATATCCTCCGTATTTCATCT+GGG 0.617091 2_1:+65852323 None:intergenic
GAACCTGAAGTCCTATCTTG+AGG 0.617632 2_1:-65850394 Msa0218590:CDS
GGTAACAATTCCATTGCAGA+AGG 0.618379 2_1:-65853697 Msa0218590:CDS
TTGTAGAAGTGAAATCAGAT+GGG 0.624691 2_1:-65855698 Msa0218590:CDS
AGAATCGTGGAATTGTGGTT+CGG 0.624798 2_1:+65856170 None:intergenic
TCCACGGGACGTTAGAAGTG+TGG 0.625060 2_1:-65855087 Msa0218590:CDS
TCCACACTTCTAACGTCCCG+TGG 0.632114 2_1:+65855086 None:intergenic
AAATTCAGAAGTGGCGACGG+TGG 0.632676 2_1:+65856282 None:intergenic
TTCATCGGAATCAGACGCGA+CGG 0.634341 2_1:+65856035 None:intergenic
GCTGTTGATGATGAATCAAA+CGG 0.636421 2_1:-65856012 Msa0218590:CDS
TGCAGATGTGAATCTTGTCA+CGG 0.638670 2_1:-65851652 Msa0218590:intron
AACCCCAAGAGCAACAATGG+AGG 0.639651 2_1:-65854478 Msa0218590:CDS
CGATAGAGAATCTCCAGAAG+AGG 0.640168 2_1:+65855939 None:intergenic
GGCGACGGTGGAGGTTACGG+TGG 0.641123 2_1:+65856294 None:intergenic
TAGAGAATCTCCAGAAGAGG+TGG 0.641979 2_1:+65855942 None:intergenic
CGTGGAATTGTGGTTCGGTG+AGG 0.648235 2_1:+65856175 None:intergenic
ACGGAGGCTTGAAGTTAGCA+GGG 0.650280 2_1:-65851061 Msa0218590:CDS
CTTCTTCAATAGAGTCTCCG+AGG 0.650707 2_1:-65855972 Msa0218590:CDS
GGTGAAATGCAGTAGATCCA+CGG 0.652611 2_1:-65856091 Msa0218590:CDS
TTGCTCTTGGGGTTTAACCG+AGG 0.658451 2_1:+65854487 None:intergenic
GATCCACGGAAGAAAAGCCG+TGG 0.662772 2_1:-65856077 Msa0218590:CDS
CCAGGTTGGAACATTCTGTG+TGG 0.669557 2_1:-65851025 Msa0218590:CDS
GCAGAAGGCCAAGAAAAGTG+TGG 0.677081 2_1:-65853682 Msa0218590:CDS
TTAGAAGTATAGCATACTCA+CGG 0.677451 2_1:+65854721 None:intergenic
GTCCTATCTTGAGGAACGTG+TGG 0.678140 2_1:-65850385 Msa0218590:intron
GCTCAAGGGCAGGAGCTCTG+AGG 0.680229 2_1:-65852372 Msa0218590:CDS
GAAGAAGAGTGAGAGAATCG+TGG 0.707159 2_1:+65856157 None:intergenic
TTCCATTCAACAGCTCACGG+AGG 0.732721 2_1:-65851077 Msa0218590:intron
TGTGTTTCCATACTCACACG+AGG 0.733801 2_1:+65853269 None:intergenic
GAGGCTTGAAGTTAGCAGGG+TGG 0.735608 2_1:-65851058 Msa0218590:CDS
CTTACCAAATCGGATAACTG+GGG 0.745411 2_1:-65852529 Msa0218590:CDS
AGGACCCAGATGAAATACGG+AGG 0.746792 2_1:-65852327 Msa0218590:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATAATAATTTTATTTTGAT+TGG - chr2_1:65850301-65850320 Msa0218590:intron 10.0%
!! TACTTATATTTGATTATAAT+CGG - chr2_1:65850928-65850947 Msa0218590:intron 10.0%
!! AAAAAAAAAAAAAAAACTGA+AGG - chr2_1:65852054-65852073 Msa0218590:intron 10.0%
!!! AAAAAATGATTTTAAGATTA+TGG - chr2_1:65852626-65852645 Msa0218590:intron 10.0%
!! TGAATAATATAAATTAAGTT+TGG + chr2_1:65854678-65854697 None:intergenic 10.0%
!!! ACAAAAATAAAATTTAAAGT+AGG - chr2_1:65855674-65855693 Msa0218590:CDS 10.0%
! CGGCCGGGGGGGGGGGGGGG+GGG - chr2_1:65854045-65854064 Msa0218590:intron 100.0%
! GGCCGGGGGGGGGGGGGGGG+GGG - chr2_1:65854046-65854065 Msa0218590:intron 100.0%
! GCCGGGGGGGGGGGGGGGGG+GGG - chr2_1:65854047-65854066 Msa0218590:intron 100.0%
! CCCCCCCCCCCCCCCCCCCC+CGG + chr2_1:65854050-65854069 None:intergenic 100.0%
! CCGGGGGGGGGGGGGGGGGG+GGG - chr2_1:65854048-65854067 Msa0218590:intron 100.0%
! CGGGGGGGGGGGGGGGGGGG+GGG - chr2_1:65854049-65854068 Msa0218590:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr2_1:65854050-65854069 Msa0218590:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr2_1:65854050-65854069 Msa0218590:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr2_1:65854050-65854069 Msa0218590:intron 100.0%
!!! TATTATTTGATGGATTTTAT+AGG + chr2_1:65849173-65849192 None:intergenic 15.0%
!! AATAATAAAAAAACCAAATC+CGG - chr2_1:65849192-65849211 Msa0218590:three_prime_UTR 15.0%
!! ACATTGTGATTATTATATTT+GGG + chr2_1:65850212-65850231 None:intergenic 15.0%
!! AACATTGTGATTATTATATT+TGG + chr2_1:65850213-65850232 None:intergenic 15.0%
!! ACAAAAGAAAAATTTGAAAA+TGG - chr2_1:65851332-65851351 Msa0218590:intron 15.0%
!! AATAAAAACTTATTTGAACA+CGG - chr2_1:65851584-65851603 Msa0218590:intron 15.0%
!!! ATTACATATTTTTATTAGCA+TGG - chr2_1:65852584-65852603 Msa0218590:intron 15.0%
!!! TTCAACTTTATTTTTTTACA+AGG - chr2_1:65852754-65852773 Msa0218590:intron 15.0%
!!! TACTCTAAAATATTTCAATA+AGG + chr2_1:65852903-65852922 None:intergenic 15.0%
!!! TTATTGAAATATTTTAGAGT+AGG - chr2_1:65852902-65852921 Msa0218590:intron 15.0%
!! AGAAATTGTACAATAAATAA+AGG - chr2_1:65853298-65853317 Msa0218590:CDS 15.0%
!! ACTATTATACTATTATACTA+TGG + chr2_1:65854274-65854293 None:intergenic 15.0%
!! GTATAATATTATTACATTCA+AGG - chr2_1:65854292-65854311 Msa0218590:intron 15.0%
!! TTAAGTTTGGTTAAAATTAT+GGG + chr2_1:65854665-65854684 None:intergenic 15.0%
!! ATTAAGTTTGGTTAAAATTA+TGG + chr2_1:65854666-65854685 None:intergenic 15.0%
!!! GTTAATTATAAATTTGTTAG+TGG - chr2_1:65854769-65854788 Msa0218590:intron 15.0%
!! AATAAAAATACATTAAGAAG+AGG + chr2_1:65855493-65855512 None:intergenic 15.0%
!! ATCTATTCATCTTATTATTT+AGG + chr2_1:65855607-65855626 None:intergenic 15.0%
!!! CAGGTTATTTTAAAATATTA+AGG - chr2_1:65855877-65855896 Msa0218590:intron 15.0%
!!! AATTATTTAATTTCTTCGTA+AGG + chr2_1:65856343-65856362 None:intergenic 15.0%
!! AAATGCATGAATAATTTATC+CGG + chr2_1:65849214-65849233 None:intergenic 20.0%
!! ATTACTATGAAATTATGTTG+TGG - chr2_1:65849726-65849745 Msa0218590:intron 20.0%
!! GATAACATCAAATTCAAAAT+AGG - chr2_1:65850243-65850262 Msa0218590:CDS 20.0%
!! ATGATATAAATATGTTAGCA+GGG + chr2_1:65850434-65850453 None:intergenic 20.0%
!! AATGATATAAATATGTTAGC+AGG + chr2_1:65850435-65850454 None:intergenic 20.0%
!! TATCATTTCTTAATACCTTA+TGG - chr2_1:65850584-65850603 Msa0218590:intron 20.0%
!! CTGAAATAATTCATATGTTA+TGG - chr2_1:65850963-65850982 Msa0218590:intron 20.0%
!! TCAATAATTAGCGTATTAAA+TGG + chr2_1:65851180-65851199 None:intergenic 20.0%
!!! TTGAAAATGGTTTATTTTCA+AGG - chr2_1:65851345-65851364 Msa0218590:intron 20.0%
!!! TGAAAATGGTTTATTTTCAA+GGG - chr2_1:65851346-65851365 Msa0218590:intron 20.0%
!!! TTTTCTTTCTTTTGTCTTAT+AGG + chr2_1:65851566-65851585 None:intergenic 20.0%
!!! TCGTTCATAATTTTATTTTG+AGG - chr2_1:65851686-65851705 Msa0218590:intron 20.0%
!!! CGTTCATAATTTTATTTTGA+GGG - chr2_1:65851687-65851706 Msa0218590:intron 20.0%
!! TATACTTAAGTATGCATTTA+TGG - chr2_1:65851739-65851758 Msa0218590:intron 20.0%
!!! GAGTAGATTTTTAAGTAATT+GGG - chr2_1:65851995-65852014 Msa0218590:intron 20.0%
!!! AGTAGATTTTTAAGTAATTG+GGG - chr2_1:65851996-65852015 Msa0218590:intron 20.0%
!! CAAAAACTGGTAAAAATTTA+TGG - chr2_1:65852461-65852480 Msa0218590:intron 20.0%
!! GATCTTAACAGTATTATAAA+TGG - chr2_1:65852545-65852564 Msa0218590:CDS 20.0%
!!! TTCTAATTTTCTTAAGATCT+TGG + chr2_1:65852785-65852804 None:intergenic 20.0%
!!! TGAAAGATTACTTTTACTTT+GGG + chr2_1:65852823-65852842 None:intergenic 20.0%
!!! ATGAAAGATTACTTTTACTT+TGG + chr2_1:65852824-65852843 None:intergenic 20.0%
!!! TCTAAAATATTTCAATAAGG+AGG + chr2_1:65852900-65852919 None:intergenic 20.0%
!! GAAAATGGTTATTTAAATCA+GGG + chr2_1:65852994-65853013 None:intergenic 20.0%
!! AGAAAATGGTTATTTAAATC+AGG + chr2_1:65852995-65853014 None:intergenic 20.0%
!! TTAAACTCTTGCAATTAAAA+TGG - chr2_1:65854348-65854367 Msa0218590:intron 20.0%
!! CAAAGTTATTAGAACAAATA+AGG + chr2_1:65854489-65854508 None:intergenic 20.0%
!! CTTATTTGTTCTAATAACTT+TGG - chr2_1:65854487-65854506 Msa0218590:CDS 20.0%
!!! TTATAAATTTGTTAGTGGTT+TGG - chr2_1:65854774-65854793 Msa0218590:intron 20.0%
!!! AGAATATTTTGATATAGATC+AGG + chr2_1:65855147-65855166 None:intergenic 20.0%
!! AAATATTCTTTCATGATTTC+AGG - chr2_1:65855158-65855177 Msa0218590:intron 20.0%
!! TGTTAAATTAACCATATTTG+TGG - chr2_1:65855298-65855317 Msa0218590:intron 20.0%
!! ACTTAATCTATAAACAATTC+AGG - chr2_1:65855723-65855742 Msa0218590:intron 20.0%
!!! TTCACTTTAGTTGATAATAT+TGG - chr2_1:65856242-65856261 Msa0218590:CDS 20.0%
! ATGAATAATTTATCCGGATT+TGG + chr2_1:65849208-65849227 None:intergenic 25.0%
! ATGTTAGTTAAATTCAGAAG+TGG + chr2_1:65849317-65849336 None:intergenic 25.0%
! ACTTCTGAATTTAACTAACA+TGG - chr2_1:65849316-65849335 Msa0218590:three_prime_UTR 25.0%
! GAAGATAAAACTAATTAAGC+AGG - chr2_1:65849811-65849830 Msa0218590:intron 25.0%
! ATAAAATAGAAGACTACATG+AGG + chr2_1:65850340-65850359 None:intergenic 25.0%
! TCGTAAAAAATAAAAGCAGA+TGG + chr2_1:65850386-65850405 None:intergenic 25.0%
! GAATTTGTCAAAAACAATGA+TGG + chr2_1:65850528-65850547 None:intergenic 25.0%
! GTATTAAGAAATGATAGAGT+GGG + chr2_1:65850580-65850599 None:intergenic 25.0%
! CATTGTTTATAAGTACCATA+AGG + chr2_1:65850602-65850621 None:intergenic 25.0%
! CTTATGGTACTTATAAACAA+TGG - chr2_1:65850600-65850619 Msa0218590:intron 25.0%
!! GGAGTAGATTAATTTTTATG+AGG + chr2_1:65850754-65850773 None:intergenic 25.0%
! TATGCTATACTTCTAAACTT+GGG - chr2_1:65850873-65850892 Msa0218590:intron 25.0%
!!! TATTGATTTTTCACCAGTAA+AGG - chr2_1:65851049-65851068 Msa0218590:CDS 25.0%
! AATACGCTAATTATTGAATC+AGG - chr2_1:65851183-65851202 Msa0218590:intron 25.0%
! ATACGCTAATTATTGAATCA+GGG - chr2_1:65851184-65851203 Msa0218590:intron 25.0%
!! AAATTTTTCTTTTGTCAGAC+AGG + chr2_1:65851327-65851346 None:intergenic 25.0%
!! TTTTGTCTCATTAGAACAAA+TGG + chr2_1:65851432-65851451 None:intergenic 25.0%
!!! TAATTTTATTTTGAGGGATG+AGG - chr2_1:65851693-65851712 Msa0218590:intron 25.0%
!! CCAAAAATCATAACCATTTT+GGG + chr2_1:65851974-65851993 None:intergenic 25.0%
!! CCAAAATGGTTATGATTTTT+GGG - chr2_1:65851972-65851991 Msa0218590:intron 25.0%
!! CAAAATGGTTATGATTTTTG+GGG - chr2_1:65851973-65851992 Msa0218590:intron 25.0%
!!! GGAGTAGATTTTTAAGTAAT+TGG - chr2_1:65851994-65852013 Msa0218590:intron 25.0%
!! TGTTCTCATTTTGTATGTTA+GGG - chr2_1:65852140-65852159 Msa0218590:intron 25.0%
! AAATTCAACCATGGTAATTA+GGG + chr2_1:65852231-65852250 None:intergenic 25.0%
! AAAATTCAACCATGGTAATT+AGG + chr2_1:65852232-65852251 None:intergenic 25.0%
! ATGTTTATGTTCATTCTTTG+TGG - chr2_1:65852355-65852374 Msa0218590:CDS 25.0%
! GTTAAGATCTTATAGAATGT+CGG + chr2_1:65852534-65852553 None:intergenic 25.0%
!!! AAGTGTTTTTTTTAGAGCTT+TGG - chr2_1:65852652-65852671 Msa0218590:intron 25.0%
!!! AAAGATTACTTTTACTTTGG+GGG + chr2_1:65852821-65852840 None:intergenic 25.0%
!!! GAAAGATTACTTTTACTTTG+GGG + chr2_1:65852822-65852841 None:intergenic 25.0%
!! TTTTTCTCATTAATCTTCAG+CGG - chr2_1:65853134-65853153 Msa0218590:intron 25.0%
! AAATAAAGGAAACCATAATG+TGG - chr2_1:65853312-65853331 Msa0218590:CDS 25.0%
!!! TTTTTTCTCATGATATGTAG+AGG - chr2_1:65853453-65853472 Msa0218590:intron 25.0%
! TGGATATTAATGGTAAGTAA+AGG + chr2_1:65853730-65853749 None:intergenic 25.0%
!!! GAATTTCTTTTTTCTCTCTT+CGG - chr2_1:65854025-65854044 Msa0218590:intron 25.0%
! TTTGACAAAGTATGTGAAAT+AGG - chr2_1:65854626-65854645 Msa0218590:intron 25.0%
! ATATTATTCACAATCTAGTC+TGG - chr2_1:65854688-65854707 Msa0218590:CDS 25.0%
! GTTTAATATACTTTCCATGA+AGG - chr2_1:65854966-65854985 Msa0218590:intron 25.0%
!! ATTTAATGCAGTTTGCATTT+TGG - chr2_1:65855321-65855340 Msa0218590:intron 25.0%
! AAAAATACATTAAGAAGAGG+AGG + chr2_1:65855490-65855509 None:intergenic 25.0%
!! TTTTATTCTTATTCCAGAGA+GGG - chr2_1:65856016-65856035 Msa0218590:CDS 25.0%
!!! TATGATCAAGTGGATTTTTA+GGG - chr2_1:65856270-65856289 Msa0218590:exon 25.0%
!! TTTAATTTCTTCGTAAGGAT+TGG + chr2_1:65856338-65856357 None:intergenic 25.0%
! GATTTACACCATAATAAAAC+AGG - chr2_1:65856367-65856386 Msa0218590:five_prime_UTR 25.0%
! TCTATTGAAGAAGTTTTGCT+CGG + chr2_1:65849608-65849627 None:intergenic 30.0%
ATAGAACGAACTTCATAAAC+AGG + chr2_1:65849689-65849708 None:intergenic 30.0%
GTTCAATGAACTAAAACCAT+AGG - chr2_1:65849783-65849802 Msa0218590:intron 30.0%
TGAACTAAAACCATAGGATT+AGG - chr2_1:65849789-65849808 Msa0218590:intron 30.0%
! GTTTTATCTTCCTAATCCTA+TGG + chr2_1:65849802-65849821 None:intergenic 30.0%
! ACTAATTTTGTGAATCGTGA+AGG - chr2_1:65849866-65849885 Msa0218590:intron 30.0%
TTGTAGAAGTGAAATCAGAT+GGG - chr2_1:65849889-65849908 Msa0218590:intron 30.0%
AGACAATTATTGAAGTCTAG+TGG - chr2_1:65849939-65849958 Msa0218590:intron 30.0%
GAGCTTATGAAAAGAACATA+TGG + chr2_1:65850188-65850207 None:intergenic 30.0%
AGATATTATACCAGCAAAGA+AGG + chr2_1:65850555-65850574 None:intergenic 30.0%
GGTATTAAGAAATGATAGAG+TGG + chr2_1:65850581-65850600 None:intergenic 30.0%
! TTAGAAGTATAGCATACTCA+CGG + chr2_1:65850869-65850888 None:intergenic 30.0%
GTATGCTATACTTCTAAACT+TGG - chr2_1:65850872-65850891 Msa0218590:intron 30.0%
!! TGTCGTTATTTCTGTGATAA+AGG - chr2_1:65850996-65851015 Msa0218590:intron 30.0%
!! GTCGTTATTTCTGTGATAAA+GGG - chr2_1:65850997-65851016 Msa0218590:intron 30.0%
!! TCGTTATTTCTGTGATAAAG+GGG - chr2_1:65850998-65851017 Msa0218590:intron 30.0%
TACTGGTGAAAAATCAATAG+AGG + chr2_1:65851048-65851067 None:intergenic 30.0%
TACGCTAATTATTGAATCAG+GGG - chr2_1:65851185-65851204 Msa0218590:intron 30.0%
GATATAGCAGAAAATGAGTT+AGG + chr2_1:65851278-65851297 None:intergenic 30.0%
!! TACTGCTATTAAGTTGATTC+AGG + chr2_1:65851397-65851416 None:intergenic 30.0%
TAATCACTGTATTCTCATAG+TGG + chr2_1:65851538-65851557 None:intergenic 30.0%
TTCCTATATACTTTCTCTTC+TGG + chr2_1:65851951-65851970 None:intergenic 30.0%
AAGTATATAGGAACCCAAAA+TGG - chr2_1:65851958-65851977 Msa0218590:intron 30.0%
! CCCAAAATGGTTATGATTTT+TGG - chr2_1:65851971-65851990 Msa0218590:intron 30.0%
! CCCAAAAATCATAACCATTT+TGG + chr2_1:65851975-65851994 None:intergenic 30.0%
CTAACATTTATATGACCAGT+TGG - chr2_1:65852099-65852118 Msa0218590:CDS 30.0%
! GTGTTCTCATTTTGTATGTT+AGG - chr2_1:65852139-65852158 Msa0218590:intron 30.0%
AATTCAACCATGGTAATTAG+GGG + chr2_1:65852230-65852249 None:intergenic 30.0%
! ATTACCATGGTTGAATTTTC+AGG - chr2_1:65852233-65852252 Msa0218590:intron 30.0%
TTATAAATGGCATTTCACGA+TGG - chr2_1:65852558-65852577 Msa0218590:intron 30.0%
!!! CATAGAAGCTATTTTTCATG+TGG - chr2_1:65852675-65852694 Msa0218590:intron 30.0%
!! AAGATTACTTTTACTTTGGG+GGG + chr2_1:65852820-65852839 None:intergenic 30.0%
TTTCTATAGCATATGTCTAG+TGG - chr2_1:65852868-65852887 Msa0218590:intron 30.0%
TATAATCTGTTATGAACCGA+AGG + chr2_1:65852939-65852958 None:intergenic 30.0%
TCGTATTAGCAAACAAACTT+TGG - chr2_1:65853097-65853116 Msa0218590:intron 30.0%
AATACGGAGGATATGTATTA+TGG - chr2_1:65853273-65853292 Msa0218590:CDS 30.0%
ATACGGAGGATATGTATTAT+GGG - chr2_1:65853274-65853293 Msa0218590:CDS 30.0%
! TTCTGGAAAATTATCTCCAA+AGG - chr2_1:65853497-65853516 Msa0218590:intron 30.0%
! TTTGGAATGAGAATAACCTT+TGG + chr2_1:65853516-65853535 None:intergenic 30.0%
TGATACGTAATGCACAAATT+TGG + chr2_1:65853534-65853553 None:intergenic 30.0%
! TAATAGTCAAAGCACTAACA+TGG - chr2_1:65853668-65853687 Msa0218590:intron 30.0%
AAGTAAAGGCTTAAGATTCT+TGG + chr2_1:65853716-65853735 None:intergenic 30.0%
AGAATTGTATCAAGTGATTG+TGG - chr2_1:65854078-65854097 Msa0218590:intron 30.0%
! GCTAATCATGGAATTGTTTT+TGG - chr2_1:65854169-65854188 Msa0218590:intron 30.0%
TCCATTGTGAAGTCAAATTA+AGG - chr2_1:65854207-65854226 Msa0218590:intron 30.0%
! TCCTTAATTTGACTTCACAA+TGG + chr2_1:65854211-65854230 None:intergenic 30.0%
AAAGCTAAGCTAATGAACTA+TGG + chr2_1:65854412-65854431 None:intergenic 30.0%
ACAAATTTCTCTTTGCATTG+AGG + chr2_1:65854437-65854456 None:intergenic 30.0%
AAAATATGTACCTGCTACAA+GGG + chr2_1:65854597-65854616 None:intergenic 30.0%
! TTGTAGCAGGTACATATTTT+GGG - chr2_1:65854597-65854616 Msa0218590:intron 30.0%
GTTTGGTTAAAATTATGGGT+GGG + chr2_1:65854661-65854680 None:intergenic 30.0%
AGTTTGGTTAAAATTATGGG+TGG + chr2_1:65854662-65854681 None:intergenic 30.0%
TCACATACCAGTAATTAAAG+TGG - chr2_1:65854735-65854754 Msa0218590:intron 30.0%
TTTGAGTCCACTTTAATTAC+TGG + chr2_1:65854745-65854764 None:intergenic 30.0%
! AATTAAAGTGGACTCAAACT+TGG - chr2_1:65854747-65854766 Msa0218590:intron 30.0%
!! AAATTTGTTAGTGGTTTGGA+TGG - chr2_1:65854778-65854797 Msa0218590:intron 30.0%
!!! AGATTTTAAGAAGTGCTGTA+GGG + chr2_1:65854816-65854835 None:intergenic 30.0%
!!! TAGATTTTAAGAAGTGCTGT+AGG + chr2_1:65854817-65854836 None:intergenic 30.0%
TAACAAATGAACATGTACCT+AGG + chr2_1:65854906-65854925 None:intergenic 30.0%
! ATTTGCTACTACCATCATAA+TGG - chr2_1:65854931-65854950 Msa0218590:intron 30.0%
ACAAAATTCTGCCATTATGA+TGG + chr2_1:65854945-65854964 None:intergenic 30.0%
!! TAGATCTTTAAAGTCCTTCA+TGG + chr2_1:65854983-65855002 None:intergenic 30.0%
! GACTTTAAAGATCTAGAATC+TGG - chr2_1:65854988-65855007 Msa0218590:intron 30.0%
! GTGGGAAAAATATGAACTTT+TGG - chr2_1:65855040-65855059 Msa0218590:intron 30.0%
TAATATTCTCTCAATCTCTC+AGG + chr2_1:65855117-65855136 None:intergenic 30.0%
TTCATGATTTCAGGCATATT+TGG - chr2_1:65855167-65855186 Msa0218590:intron 30.0%
TATTCCATCTATGACTTACT+TGG - chr2_1:65855245-65855264 Msa0218590:intron 30.0%
!! ATGACTTACTTGGTTCTTTT+TGG - chr2_1:65855255-65855274 Msa0218590:intron 30.0%
!! TGGTTCTTTTTGGAAGTTAT+TGG - chr2_1:65855265-65855284 Msa0218590:intron 30.0%
CTGCATTAAATCCACAAATA+TGG + chr2_1:65855312-65855331 None:intergenic 30.0%
! AAAATATTTTCCTTGCTCTG+AGG + chr2_1:65855406-65855425 None:intergenic 30.0%
TCAGACGAAACTTCAAATAT+AGG - chr2_1:65855428-65855447 Msa0218590:intron 30.0%
! ATTTAAAGTAGGCTTTCAAG+TGG - chr2_1:65855685-65855704 Msa0218590:CDS 30.0%
TTAGAAGTAGAGGTCAAAAT+AGG + chr2_1:65855780-65855799 None:intergenic 30.0%
!!! TATTTTGACCTCTACTTCTA+AGG - chr2_1:65855779-65855798 Msa0218590:intron 30.0%
! CTTTTATTCTTATTCCAGAG+AGG - chr2_1:65856015-65856034 Msa0218590:CDS 30.0%
TTTATTCTTATTCCAGAGAG+GGG - chr2_1:65856017-65856036 Msa0218590:CDS 30.0%
!!! TCAATTTTTTACTGCTTCAC+AGG - chr2_1:65856049-65856068 Msa0218590:CDS 30.0%
TTTACATAAGAACTGCATGA+AGG - chr2_1:65856197-65856216 Msa0218590:CDS 30.0%
!! GTATGATCAAGTGGATTTTT+AGG - chr2_1:65856269-65856288 Msa0218590:exon 30.0%
ACCATAATAAAACAGGTATC+TGG - chr2_1:65856374-65856393 Msa0218590:five_prime_UTR 30.0%
! AGGTTTTACCCAACAATTAA+TGG + chr2_1:65856402-65856421 None:intergenic 30.0%
TTCAAACTTTCACAAGAACT+CGG + chr2_1:65856426-65856445 None:intergenic 30.0%
TCTTGTGAAAGTTTGAATGA+TGG - chr2_1:65856429-65856448 Msa0218590:five_prime_UTR 30.0%
TTCATCATCAACAGCTTCAT+CGG + chr2_1:65849570-65849589 None:intergenic 35.0%
!! GCTGTTGATGATGAATCAAA+CGG - chr2_1:65849575-65849594 Msa0218590:intron 35.0%
GTTGTAGAAGTGAAATCAGA+TGG - chr2_1:65849888-65849907 Msa0218590:intron 35.0%
! ATAAGCGCTCAATTAAGTTG+TGG + chr2_1:65850022-65850041 None:intergenic 35.0%
AATAGAAGACTACATGAGGT+AGG + chr2_1:65850336-65850355 None:intergenic 35.0%
TGATGAGCGTTCAATTATTC+AGG - chr2_1:65850471-65850490 Msa0218590:intron 35.0%
AAATTCAATGCCTTCTTTGC+TGG - chr2_1:65850542-65850561 Msa0218590:intron 35.0%
ATACTACAAAGAGCAGTCTA+TGG + chr2_1:65850649-65850668 None:intergenic 35.0%
CAGTCTATCAACTATCATGA+AGG - chr2_1:65850700-65850719 Msa0218590:intron 35.0%
GCAAGGAAATCGAATCATTA+GGG + chr2_1:65850834-65850853 None:intergenic 35.0%
AGCAAGGAAATCGAATCATT+AGG + chr2_1:65850835-65850854 None:intergenic 35.0%
CGATTTCCTTGCTTTGTATT+AGG - chr2_1:65850842-65850861 Msa0218590:intron 35.0%
! TGATTTTTCACCAGTAAAGG+AGG - chr2_1:65851052-65851071 Msa0218590:CDS 35.0%
! GATTTTTCACCAGTAAAGGA+GGG - chr2_1:65851053-65851072 Msa0218590:CDS 35.0%
! TCGATTTCAAATGGCATTGA+TGG + chr2_1:65851136-65851155 None:intergenic 35.0%
! ATCAATGCCATTTGAAATCG+AGG - chr2_1:65851135-65851154 Msa0218590:intron 35.0%
ACGCTAATTATTGAATCAGG+GGG - chr2_1:65851186-65851205 Msa0218590:intron 35.0%
ACTTTACCTTTCCAAACCTT+GGG + chr2_1:65851765-65851784 None:intergenic 35.0%
AACTTTACCTTTCCAAACCT+TGG + chr2_1:65851766-65851785 None:intergenic 35.0%
AAGGTTTGGAAAGGTAAAGT+TGG - chr2_1:65851765-65851784 Msa0218590:intron 35.0%
!!! TTTTAAGGCCACACTTTTCT+TGG + chr2_1:65851916-65851935 None:intergenic 35.0%
! TGCCAGAAGAGAAAGTATAT+AGG - chr2_1:65851946-65851965 Msa0218590:intron 35.0%
!! TAAAGAGGGTATTAACCACA+GGG + chr2_1:65852035-65852054 None:intergenic 35.0%
!! TTAAAGAGGGTATTAACCAC+AGG + chr2_1:65852036-65852055 None:intergenic 35.0%
ATTCAACCATGGTAATTAGG+GGG + chr2_1:65852229-65852248 None:intergenic 35.0%
ACAACCTGAAAATTCAACCA+TGG + chr2_1:65852240-65852259 None:intergenic 35.0%
GCTTTCAAGAATACAACGTT+TGG - chr2_1:65852272-65852291 Msa0218590:CDS 35.0%
AATTTGCCTGTTTGTTCCTA+TGG - chr2_1:65852402-65852421 Msa0218590:intron 35.0%
CAACTACATATCAAAGCCAT+AGG + chr2_1:65852421-65852440 None:intergenic 35.0%
ATGAAAAAGCTGAACTCAAC+TGG - chr2_1:65852842-65852861 Msa0218590:intron 35.0%
TGGTTATTTAAATCAGGGAC+AGG + chr2_1:65852989-65853008 None:intergenic 35.0%
ATATCCTCCGTATTTCATCT+GGG + chr2_1:65853267-65853286 None:intergenic 35.0%
TTTCTCATGATATGTAGAGG+AGG - chr2_1:65853456-65853475 Msa0218590:intron 35.0%
TCCTCAACATGACATAAGAA+AGG + chr2_1:65853645-65853664 None:intergenic 35.0%
TTCTTATGTCATGTTGAGGA+AGG - chr2_1:65853645-65853664 Msa0218590:intron 35.0%
GAGAGCTTTCTGGATATTAA+TGG + chr2_1:65853740-65853759 None:intergenic 35.0%
TCTTAATGCAGATTCCTTTC+AGG + chr2_1:65853780-65853799 None:intergenic 35.0%
ATTCTATAGCTGTCAGTTTG+AGG - chr2_1:65853999-65854018 Msa0218590:intron 35.0%
ATTAAGGAATTAACCCTTCG+TGG - chr2_1:65854223-65854242 Msa0218590:intron 35.0%
ATGGTGTTTGAGTATATGCA+CGG + chr2_1:65854393-65854412 None:intergenic 35.0%
CAAAATATGTACCTGCTACA+AGG + chr2_1:65854598-65854617 None:intergenic 35.0%
! CTTGTAGCAGGTACATATTT+TGG - chr2_1:65854596-65854615 Msa0218590:intron 35.0%
!!! GATTTTAAGAAGTGCTGTAG+GGG + chr2_1:65854815-65854834 None:intergenic 35.0%
GTGCAATGCATGTTATTATC+AGG + chr2_1:65854873-65854892 None:intergenic 35.0%
AGTTCCTTTCGAGATCAAAT+TGG + chr2_1:65855019-65855038 None:intergenic 35.0%
!!! AATATGAACTTTTGGCTCTG+TGG - chr2_1:65855048-65855067 Msa0218590:CDS 35.0%
AGAACCAAGTAAGTCATAGA+TGG + chr2_1:65855252-65855271 None:intergenic 35.0%
! ACCACATCTGGGATTATTAT+TGG - chr2_1:65855347-65855366 Msa0218590:intron 35.0%
ACCAATAATAATCCCAGATG+TGG + chr2_1:65855351-65855370 None:intergenic 35.0%
! ACATCTGGGATTATTATTGG+TGG - chr2_1:65855350-65855369 Msa0218590:intron 35.0%
!! TAGGTAAGTTTGTTACCTTC+TGG - chr2_1:65855447-65855466 Msa0218590:intron 35.0%
TCTATAAACAATTCAGGCTC+AGG - chr2_1:65855729-65855748 Msa0218590:intron 35.0%
AGGTCAAAATAGGTTACGTA+TGG + chr2_1:65855770-65855789 None:intergenic 35.0%
TGACTAAACCTTAGAAGTAG+AGG + chr2_1:65855790-65855809 None:intergenic 35.0%
AAATGAATCAGAATCCCTTC+AGG + chr2_1:65855855-65855874 None:intergenic 35.0%
!! GGGATTCTGATTCATTTTTC+AGG - chr2_1:65855858-65855877 Msa0218590:intron 35.0%
TGTGCACAAAGATCAATCTA+CGG - chr2_1:65855927-65855946 Msa0218590:CDS 35.0%
CAAAGATCAATCTACGGAAA+TGG - chr2_1:65855933-65855952 Msa0218590:CDS 35.0%
! TCAATCTACGGAAATGGATT+TGG - chr2_1:65855939-65855958 Msa0218590:CDS 35.0%
!!! TCACACTGTTTTTAGTGTCA+AGG - chr2_1:65856169-65856188 Msa0218590:CDS 35.0%
!! ATTGGTGTTGTATGATCAAG+TGG - chr2_1:65856260-65856279 Msa0218590:exon 35.0%
!! GCCAGATACCTGTTTTATTA+TGG + chr2_1:65856378-65856397 None:intergenic 35.0%
! TATCTGGCTCCATTAATTGT+TGG - chr2_1:65856390-65856409 Msa0218590:five_prime_UTR 35.0%
! ATCTGGCTCCATTAATTGTT+GGG - chr2_1:65856391-65856410 Msa0218590:five_prime_UTR 35.0%
GTTAAATTCAGAAGTGGCGA+CGG + chr2_1:65849311-65849330 None:intergenic 40.0%
AGAATCGTGGAATTGTGGTT+CGG + chr2_1:65849420-65849439 None:intergenic 40.0%
!! ATGTAACGGAGATTTTGCTC+CGG + chr2_1:65849457-65849476 None:intergenic 40.0%
ATTATTCAGGTCTTCGTCCA+CGG - chr2_1:65850484-65850503 Msa0218590:intron 40.0%
!!! CACACACACCAGTTTTGTTT+CGG - chr2_1:65850779-65850798 Msa0218590:intron 40.0%
!!! ACACACACCAGTTTTGTTTC+GGG - chr2_1:65850780-65850799 Msa0218590:intron 40.0%
GTGTATTCCCGAAACAAAAC+TGG + chr2_1:65850790-65850809 None:intergenic 40.0%
TTAAACCCCAAGAGCAACAA+TGG - chr2_1:65851106-65851125 Msa0218590:intron 40.0%
CAACAGACCTCGATTTCAAA+TGG + chr2_1:65851145-65851164 None:intergenic 40.0%
! CATTTGAAATCGAGGTCTGT+TGG - chr2_1:65851143-65851162 Msa0218590:intron 40.0%
TTAGTGAACCAGACTATGCT+TGG + chr2_1:65851245-65851264 None:intergenic 40.0%
GAGATATGATAGTTAGACCC+AGG - chr2_1:65851489-65851508 Msa0218590:intron 40.0%
! TACTGCTACTCAGTTGTTTC+AGG + chr2_1:65851515-65851534 None:intergenic 40.0%
AAGTATGCATTTATGGCCCA+AGG - chr2_1:65851746-65851765 Msa0218590:intron 40.0%
GTTTGGAAAGGTAAAGTTGG+TGG - chr2_1:65851768-65851787 Msa0218590:intron 40.0%
GGTAACAATTCCATTGCAGA+AGG - chr2_1:65851890-65851909 Msa0218590:intron 40.0%
! TGTGGCCTTAAAAGTAAGTC+AGG - chr2_1:65851923-65851942 Msa0218590:intron 40.0%
!! TGGCACCTGACTTACTTTTA+AGG + chr2_1:65851931-65851950 None:intergenic 40.0%
ATATGACCAGTTGGTTACCA+TGG - chr2_1:65852108-65852127 Msa0218590:CDS 40.0%
TATGACCAGTTGGTTACCAT+GGG - chr2_1:65852109-65852128 Msa0218590:CDS 40.0%
GATGACATTGACAAGCAAGA+TGG + chr2_1:65852173-65852192 None:intergenic 40.0%
CTTGCTTGTCAATGTCATCA+TGG - chr2_1:65852174-65852193 Msa0218590:intron 40.0%
CAAGAATACAACGTTTGGAG+CGG - chr2_1:65852277-65852296 Msa0218590:CDS 40.0%
TCAAAGCCATAGGAACAAAC+AGG + chr2_1:65852411-65852430 None:intergenic 40.0%
ACCTGTACATGAGCAAAAAC+TGG - chr2_1:65852448-65852467 Msa0218590:intron 40.0%
! ACCAGTTTTTGCTCATGTAC+AGG + chr2_1:65852452-65852471 None:intergenic 40.0%
!!! GTAGGCTGATTTTTTGCCTT+CGG - chr2_1:65852920-65852939 Msa0218590:intron 40.0%
AGGATTCAGAGACAGGAAAA+GGG + chr2_1:65852969-65852988 None:intergenic 40.0%
TCAAGAAGAGCTTGAACCTA+GGG + chr2_1:65853035-65853054 None:intergenic 40.0%
TTCTTGAGGCCTTACCAAAT+CGG - chr2_1:65853048-65853067 Msa0218590:intron 40.0%
CCTTACCAAATCGGATAACT+GGG - chr2_1:65853057-65853076 Msa0218590:intron 40.0%
CTTACCAAATCGGATAACTG+GGG - chr2_1:65853058-65853077 Msa0218590:intron 40.0%
ATATCCCCAGTTATCCGATT+TGG + chr2_1:65853065-65853084 None:intergenic 40.0%
CCTAACTCAACCTAGCAATT+TGG + chr2_1:65853196-65853215 None:intergenic 40.0%
! CCAAATTGCTAGGTTGAGTT+AGG - chr2_1:65853193-65853212 Msa0218590:intron 40.0%
CATATCCTCCGTATTTCATC+TGG + chr2_1:65853268-65853287 None:intergenic 40.0%
! TTTTGTGTGCTCATGTGTTG+AGG - chr2_1:65853565-65853584 Msa0218590:intron 40.0%
AACAGTGTTGTATGCCTTCA+CGG - chr2_1:65853619-65853638 Msa0218590:intron 40.0%
GCCTTTCTTATGTCATGTTG+AGG - chr2_1:65853641-65853660 Msa0218590:intron 40.0%
! TAGTCAAAGCACTAACATGG+TGG - chr2_1:65853671-65853690 Msa0218590:intron 40.0%
ACATGGATAAGAGAGCTTTC+TGG + chr2_1:65853750-65853769 None:intergenic 40.0%
TCCATGTTGCAATACCTGAA+AGG - chr2_1:65853763-65853782 Msa0218590:intron 40.0%
! TCCTTTCAGGTATTGCAACA+TGG + chr2_1:65853767-65853786 None:intergenic 40.0%
TGCAGATGTGAATCTTGTCA+CGG - chr2_1:65853935-65853954 Msa0218590:intron 40.0%
AAAGGCTTCTTGATTCTGCA+AGG - chr2_1:65853966-65853985 Msa0218590:intron 40.0%
AAGGCTTCTTGATTCTGCAA+GGG - chr2_1:65853967-65853986 Msa0218590:intron 40.0%
TCTTGATTCTGCAAGGGAAA+TGG - chr2_1:65853973-65853992 Msa0218590:intron 40.0%
!!! TTCTTTTTTCTCTCTTCGGC+CGG - chr2_1:65854029-65854048 Msa0218590:intron 40.0%
GATTAGCAAAACGCAGCTTT+GGG + chr2_1:65854156-65854175 None:intergenic 40.0%
TGATTAGCAAAACGCAGCTT+TGG + chr2_1:65854157-65854176 None:intergenic 40.0%
! AAGCTGCGTTTTGCTAATCA+TGG - chr2_1:65854157-65854176 Msa0218590:intron 40.0%
!!! TGTTTTTGGACTGTCATCCT+TGG - chr2_1:65854183-65854202 Msa0218590:intron 40.0%
TTGACTTCACAATGGAACCA+AGG + chr2_1:65854203-65854222 None:intergenic 40.0%
TGACAATATGTGACCACGAA+GGG + chr2_1:65854239-65854258 None:intergenic 40.0%
ATGACAATATGTGACCACGA+AGG + chr2_1:65854240-65854259 None:intergenic 40.0%
CACGGAGTTAGATTCTTAGA+TGG + chr2_1:65854375-65854394 None:intergenic 40.0%
TTACTGATGACAGAGAGCTA+TGG + chr2_1:65854466-65854485 None:intergenic 40.0%
!! TAGCAGGTACATATTTTGGG+TGG - chr2_1:65854600-65854619 Msa0218590:intron 40.0%
ATTGCACCATTTAACCACCT+AGG - chr2_1:65854886-65854905 Msa0218590:intron 40.0%
CATGTACCTAGGTGGTTAAA+TGG + chr2_1:65854895-65854914 None:intergenic 40.0%
CAAATGAACATGTACCTAGG+TGG + chr2_1:65854903-65854922 None:intergenic 40.0%
GTTGCCAATTTGATCTCGAA+AGG - chr2_1:65855012-65855031 Msa0218590:intron 40.0%
TTGATCTCGAAAGGAACTTG+TGG - chr2_1:65855021-65855040 Msa0218590:intron 40.0%
TGATCTCGAAAGGAACTTGT+GGG - chr2_1:65855022-65855041 Msa0218590:intron 40.0%
GTTAAATGCACAAGACTGTC+TGG - chr2_1:65855084-65855103 Msa0218590:CDS 40.0%
!!! CATTTTGGTTGACCACATCT+GGG - chr2_1:65855336-65855355 Msa0218590:intron 40.0%
TGTATAACTACCTCAGAGCA+AGG - chr2_1:65855393-65855412 Msa0218590:intron 40.0%
TTAAGAAGAGGAGGATTGCT+GGG + chr2_1:65855481-65855500 None:intergenic 40.0%
ATTAAGAAGAGGAGGATTGC+TGG + chr2_1:65855482-65855501 None:intergenic 40.0%
! AATCAGAATCCCTTCAGGTT+CGG + chr2_1:65855850-65855869 None:intergenic 40.0%
TGCACAATCACTGCATTTGT+GGG + chr2_1:65855913-65855932 None:intergenic 40.0%
ACTGCTTCACAGGTTCATAA+TGG - chr2_1:65856059-65856078 Msa0218590:CDS 40.0%
!! GATCAAGTGGATTTTTAGGG+TGG - chr2_1:65856273-65856292 Msa0218590:exon 40.0%
AACTTTCACAAGAACTCGGT+AGG + chr2_1:65856422-65856441 None:intergenic 40.0%
!! AACGGAACAAGGTTGGTAGT+TGG + chr2_1:65849259-65849278 None:intergenic 45.0%
AAAGGTTGGAAGCGAAAGTG+AGG + chr2_1:65849359-65849378 None:intergenic 45.0%
GTGAGAGAATCGTGGAATTG+TGG + chr2_1:65849425-65849444 None:intergenic 45.0%
GAAGAAGAGTGAGAGAATCG+TGG + chr2_1:65849433-65849452 None:intergenic 45.0%
ATTCTCTCACTCTTCTTCGC+CGG - chr2_1:65849435-65849454 Msa0218590:three_prime_UTR 45.0%
GTGGATCTACTGCATTTCAC+CGG + chr2_1:65849497-65849516 None:intergenic 45.0%
GGTGAAATGCAGTAGATCCA+CGG - chr2_1:65849496-65849515 Msa0218590:three_prime_UTR 45.0%
CTTCTTCAATAGAGTCTCCG+AGG - chr2_1:65849615-65849634 Msa0218590:intron 45.0%
TAGAGAATCTCCAGAAGAGG+TGG + chr2_1:65849648-65849667 None:intergenic 45.0%
CGATAGAGAATCTCCAGAAG+AGG + chr2_1:65849651-65849670 None:intergenic 45.0%
TCTGGAGATTCTCTATCGCT+CGG - chr2_1:65849653-65849672 Msa0218590:three_prime_UTR 45.0%
CTACATGAGGTAGGTGCTAA+TGG + chr2_1:65850327-65850346 None:intergenic 45.0%
TTATTCAGGTCTTCGTCCAC+GGG - chr2_1:65850485-65850504 Msa0218590:intron 45.0%
AAAACTGGTGTGTGTGCATG+TGG + chr2_1:65850775-65850794 None:intergenic 45.0%
CACGGACCTAATACAAAGCA+AGG + chr2_1:65850851-65850870 None:intergenic 45.0%
AAAAGCTTGCCCTCCTTTAC+TGG + chr2_1:65851065-65851084 None:intergenic 45.0%
!! TTCTAGAGTCATTGCTGCCT+CGG - chr2_1:65851083-65851102 Msa0218590:intron 45.0%
TCCAACTTCCAAGCATAGTC+TGG - chr2_1:65851234-65851253 Msa0218590:intron 45.0%
ACCAGACTATGCTTGGAAGT+TGG + chr2_1:65851238-65851257 None:intergenic 45.0%
! TACTCAGTTGTTTCAGGCCT+GGG + chr2_1:65851509-65851528 None:intergenic 45.0%
TGCATTTATGGCCCAAGGTT+TGG - chr2_1:65851751-65851770 Msa0218590:intron 45.0%
TTATGGCCCAAGGTTTGGAA+AGG - chr2_1:65851756-65851775 Msa0218590:intron 45.0%
AGTGTAAAAGACGACGCAGA+AGG - chr2_1:65851857-65851876 Msa0218590:intron 45.0%
GACGCAGAAGGATCTAAAGA+TGG - chr2_1:65851869-65851888 Msa0218590:intron 45.0%
!! CTTTTCTTGGCCTTCTGCAA+TGG + chr2_1:65851903-65851922 None:intergenic 45.0%
TTACACCCATGGTAACCAAC+TGG + chr2_1:65852117-65852136 None:intergenic 45.0%
TGAGAACACAGTTACACCCA+TGG + chr2_1:65852128-65852147 None:intergenic 45.0%
ATGGTAATTAGGGGGAAGAG+TGG + chr2_1:65852221-65852240 None:intergenic 45.0%
ACTCTTCCCCCTAATTACCA+TGG - chr2_1:65852220-65852239 Msa0218590:intron 45.0%
CTTAGAACCTCGTGTGAGTA+TGG - chr2_1:65852311-65852330 Msa0218590:CDS 45.0%
TGTGTTTCCATACTCACACG+AGG + chr2_1:65852321-65852340 None:intergenic 45.0%
CAGGATTCAGAGACAGGAAA+AGG + chr2_1:65852970-65852989 None:intergenic 45.0%
CTCAAGAAGAGCTTGAACCT+AGG + chr2_1:65853036-65853055 None:intergenic 45.0%
CTAGGTTCAAGCTCTTCTTG+AGG - chr2_1:65853034-65853053 Msa0218590:intron 45.0%
GCCTTACCAAATCGGATAAC+TGG - chr2_1:65853056-65853075 Msa0218590:intron 45.0%
!! CCCAGTTATCCGATTTGGTA+AGG + chr2_1:65853060-65853079 None:intergenic 45.0%
TCGGATAACTGGGGATATAC+TGG - chr2_1:65853067-65853086 Msa0218590:intron 45.0%
ACCTAGCAATTTGGCAGGAA+GGG + chr2_1:65853187-65853206 None:intergenic 45.0%
AACCTAGCAATTTGGCAGGA+AGG + chr2_1:65853188-65853207 None:intergenic 45.0%
ACTCAACCTAGCAATTTGGC+AGG + chr2_1:65853192-65853211 None:intergenic 45.0%
! CTAGGTTGAGTTAGGCTCAA+GGG - chr2_1:65853201-65853220 Msa0218590:intron 45.0%
TGGAGGACCCAGATGAAATA+CGG - chr2_1:65853257-65853276 Msa0218590:intron 45.0%
GCACTGAGCATTCCACATTA+TGG + chr2_1:65853327-65853346 None:intergenic 45.0%
TCAGCAACCTGCTTGTCTAA+AGG + chr2_1:65853349-65853368 None:intergenic 45.0%
TTTAGACAAGCAGGTTGCTG+AGG - chr2_1:65853348-65853367 Msa0218590:intron 45.0%
TTAGACAAGCAGGTTGCTGA+GGG - chr2_1:65853349-65853368 Msa0218590:intron 45.0%
GAGGGTAAGCTGTGAAATAC+TGG - chr2_1:65853367-65853386 Msa0218590:intron 45.0%
CTCATGATATGTAGAGGAGG+AGG - chr2_1:65853459-65853478 Msa0218590:intron 45.0%
ATGATATGTAGAGGAGGAGG+AGG - chr2_1:65853462-65853481 Msa0218590:intron 45.0%
GGAGGAAATTGAGATGCTTC+TGG - chr2_1:65853480-65853499 Msa0218590:intron 45.0%
TGACATAAGAAAGGCCGTGA+AGG + chr2_1:65853636-65853655 None:intergenic 45.0%
!!! TCTTTTTTCTCTCTTCGGCC+GGG - chr2_1:65854030-65854049 Msa0218590:intron 45.0%
TGGTTCCATTCAACAGCTCA+CGG - chr2_1:65854507-65854526 Msa0218590:CDS 45.0%
GAACCTGAAGTCCTATCTTG+AGG - chr2_1:65855193-65855212 Msa0218590:intron 45.0%
GTTCCTCAAGATAGGACTTC+AGG + chr2_1:65855199-65855218 None:intergenic 45.0%
!!! GCATTTTGGTTGACCACATC+TGG - chr2_1:65855335-65855354 Msa0218590:intron 45.0%
TAAGAAGAGGAGGATTGCTG+GGG + chr2_1:65855480-65855499 None:intergenic 45.0%
ATTAAGTGCTCCGAACCTGA+AGG - chr2_1:65855837-65855856 Msa0218590:intron 45.0%
TTAAGTGCTCCGAACCTGAA+GGG - chr2_1:65855838-65855857 Msa0218590:intron 45.0%
GTGCACAATCACTGCATTTG+TGG + chr2_1:65855914-65855933 None:intergenic 45.0%
TGAATCTGTTTACCCCTCTC+TGG + chr2_1:65856032-65856051 None:intergenic 45.0%
!!! TTTTTATTATTATTATTTGA+TGG + chr2_1:65849183-65849202 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTAAAGA+GGG + chr2_1:65852049-65852068 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTAAAG+AGG + chr2_1:65852050-65852069 None:intergenic 5.0%
TACCAACCTTGTTCCGTTCC+CGG - chr2_1:65849261-65849280 Msa0218590:three_prime_UTR 50.0%
!! TTACGGTGGTTTTGCATGCC+GGG + chr2_1:65849282-65849301 None:intergenic 50.0%
!! GTTACGGTGGTTTTGCATGC+CGG + chr2_1:65849283-65849302 None:intergenic 50.0%
AAATTCAGAAGTGGCGACGG+TGG + chr2_1:65849308-65849327 None:intergenic 50.0%
GTCGGAGAAGAAGAGGTAGT+TGG + chr2_1:65849393-65849412 None:intergenic 50.0%
!! GAATTGTGGTTCGGTGAGGT+CGG + chr2_1:65849411-65849430 None:intergenic 50.0%
TTCATCGGAATCAGACGCGA+CGG + chr2_1:65849555-65849574 None:intergenic 50.0%
GAAGAGGTGGTTGCAATCCT+CGG + chr2_1:65849635-65849654 None:intergenic 50.0%
AGGATTGCAACCACCTCTTC+TGG - chr2_1:65849635-65849654 Msa0218590:intron 50.0%
TTGCTCTTGGGGTTTAACCG+AGG + chr2_1:65851103-65851122 None:intergenic 50.0%
AACCCCAAGAGCAACAATGG+AGG - chr2_1:65851109-65851128 Msa0218590:intron 50.0%
ACCCCAAGAGCAACAATGGA+GGG - chr2_1:65851110-65851129 Msa0218590:intron 50.0%
! CTACTCAGTTGTTTCAGGCC+TGG + chr2_1:65851510-65851529 None:intergenic 50.0%
GCAGAAGGCCAAGAAAAGTG+TGG - chr2_1:65851905-65851924 Msa0218590:intron 50.0%
TGTCGGCATGAAGAAGTAGC+AGG + chr2_1:65852517-65852536 None:intergenic 50.0%
CCTAGCAATTTGGCAGGAAG+GGG + chr2_1:65853186-65853205 None:intergenic 50.0%
! GCTAGGTTGAGTTAGGCTCA+AGG - chr2_1:65853200-65853219 Msa0218590:intron 50.0%
! GCAGATGCTGCTTGATCTTC+TGG - chr2_1:65853237-65853256 Msa0218590:intron 50.0%
! GATGCTGCTTGATCTTCTGG+AGG - chr2_1:65853240-65853259 Msa0218590:intron 50.0%
AGGACCCAGATGAAATACGG+AGG - chr2_1:65853260-65853279 Msa0218590:intron 50.0%
CTCAGTGCCTTTAGACAAGC+AGG - chr2_1:65853339-65853358 Msa0218590:intron 50.0%
CTTGTCACGGTCAAGCTGAA+AGG - chr2_1:65853948-65853967 Msa0218590:intron 50.0%
!!! CTTTTTTCTCTCTTCGGCCG+GGG - chr2_1:65854031-65854050 Msa0218590:intron 50.0%
!!! TTTTTTCTCTCTTCGGCCGG+GGG - chr2_1:65854032-65854051 Msa0218590:intron 50.0%
TTCCATTCAACAGCTCACGG+AGG - chr2_1:65854510-65854529 Msa0218590:CDS 50.0%
ACGGAGGCTTGAAGTTAGCA+GGG - chr2_1:65854526-65854545 Msa0218590:intron 50.0%
CCACACAGAATGTTCCAACC+TGG + chr2_1:65854565-65854584 None:intergenic 50.0%
! CCAGGTTGGAACATTCTGTG+TGG - chr2_1:65854562-65854581 Msa0218590:intron 50.0%
GGAACATTCTGTGTGGCAGT+TGG - chr2_1:65854569-65854588 Msa0218590:intron 50.0%
GTCCTATCTTGAGGAACGTG+TGG - chr2_1:65855202-65855221 Msa0218590:intron 50.0%
CACCACACGTTCCTCAAGAT+AGG + chr2_1:65855207-65855226 None:intergenic 50.0%
ACGTATGGCAGAGCTTATCG+AGG + chr2_1:65855755-65855774 None:intergenic 50.0%
CCTAGCGAAGAGTCTCTTGA+TGG + chr2_1:65856103-65856122 None:intergenic 50.0%
CCATCAAGAGACTCTTCGCT+AGG - chr2_1:65856100-65856119 Msa0218590:CDS 50.0%
! TCGCTAGGTTGTTGCTTGTG+TGG - chr2_1:65856115-65856134 Msa0218590:CDS 50.0%
! CGCTAGGTTGTTGCTTGTGT+GGG - chr2_1:65856116-65856135 Msa0218590:CDS 50.0%
!! GTGGTTTTGCATGCCGGGAA+CGG + chr2_1:65849277-65849296 None:intergenic 55.0%
! TAGTTGGTGCGCGTGAGGAA+AGG + chr2_1:65849377-65849396 None:intergenic 55.0%
!! CGTGGAATTGTGGTTCGGTG+AGG + chr2_1:65849415-65849434 None:intergenic 55.0%
GAGCGCAGGCGATGATGTAA+CGG + chr2_1:65849471-65849490 None:intergenic 55.0%
GATCCACGGAAGAAAAGCCG+TGG - chr2_1:65849510-65849529 Msa0218590:three_prime_UTR 55.0%
! GTTCCACGGCTTTTCTTCCG+TGG + chr2_1:65849516-65849535 None:intergenic 55.0%
TCGGTTTCAGCGTCGTTCCA+CGG + chr2_1:65849530-65849549 None:intergenic 55.0%
GGAATCAGACGCGACGGTTT+CGG + chr2_1:65849549-65849568 None:intergenic 55.0%
TCCACGGGACGTTAGAAGTG+TGG - chr2_1:65850500-65850519 Msa0218590:intron 55.0%
TCCACACTTCTAACGTCCCG+TGG + chr2_1:65850504-65850523 None:intergenic 55.0%
GCCCTCCATTGTTGCTCTTG+GGG + chr2_1:65851114-65851133 None:intergenic 55.0%
GGCCCTCCATTGTTGCTCTT+GGG + chr2_1:65851115-65851134 None:intergenic 55.0%
TGGCCCTCCATTGTTGCTCT+TGG + chr2_1:65851116-65851135 None:intergenic 55.0%
GGTGTAAGTCTCGTTCCCTG+TGG - chr2_1:65852017-65852036 Msa0218590:intron 55.0%
! ACGTTTGGAGCGGAGACTGA+TGG - chr2_1:65852287-65852306 Msa0218590:CDS 55.0%
CAGGGACAGGATTCAGAGAC+AGG + chr2_1:65852976-65852995 None:intergenic 55.0%
AGAGCTTGAACCTAGGGCCA+GGG + chr2_1:65853029-65853048 None:intergenic 55.0%
AAGAGCTTGAACCTAGGGCC+AGG + chr2_1:65853030-65853049 None:intergenic 55.0%
CCCCTTCCTGCCAAATTGCT+AGG - chr2_1:65853183-65853202 Msa0218590:intron 55.0%
GTTGAGTTAGGCTCAAGGGC+AGG - chr2_1:65853205-65853224 Msa0218590:intron 55.0%
! TTTTTCTCTCTTCGGCCGGG+GGG - chr2_1:65854033-65854052 Msa0218590:intron 55.0%
AGCCTCCGTGAGCTGTTGAA+TGG + chr2_1:65854515-65854534 None:intergenic 55.0%
CACGGAGGCTTGAAGTTAGC+AGG - chr2_1:65854525-65854544 Msa0218590:intron 55.0%
GAGGCTTGAAGTTAGCAGGG+TGG - chr2_1:65854529-65854548 Msa0218590:intron 55.0%
GTGGAACTGCTTCTCCAGGT+TGG - chr2_1:65854548-65854567 Msa0218590:intron 55.0%
AGGAGGATTGCTGGGGAAAC+AGG + chr2_1:65855473-65855492 None:intergenic 55.0%
ATCCATGCACTGCGTGACTC+TGG + chr2_1:65856311-65856330 None:intergenic 55.0%
GAGTCACGCAGTGCATGGAT+CGG - chr2_1:65856311-65856330 Msa0218590:five_prime_UTR 55.0%
TGCCGGGAACGGAACAAGGT+TGG + chr2_1:65849266-65849285 None:intergenic 60.0%
TGCATGCCGGGAACGGAACA+AGG + chr2_1:65849270-65849289 None:intergenic 60.0%
AGTGGCGACGGTGGAGGTTA+CGG + chr2_1:65849299-65849318 None:intergenic 60.0%
TTCAGAAGTGGCGACGGTGG+AGG + chr2_1:65849305-65849324 None:intergenic 60.0%
TGGTGCGCGTGAGGAAAGGT+TGG + chr2_1:65849373-65849392 None:intergenic 60.0%
! AGAGGTAGTTGGTGCGCGTG+AGG + chr2_1:65849382-65849401 None:intergenic 60.0%
CGGTGAGGTCGGAGAAGAAG+AGG + chr2_1:65849400-65849419 None:intergenic 60.0%
ATCATCGCCTGCGCTCAAGC+CGG - chr2_1:65849475-65849494 Msa0218590:three_prime_UTR 60.0%
!! CATTTCACCGGCTTGAGCGC+AGG + chr2_1:65849485-65849504 None:intergenic 60.0%
GGGGGTAGGGGGAGAGAAAA+TGG + chr2_1:65853009-65853028 None:intergenic 60.0%
! TTTTCTCTCCCCCTACCCCC+TGG - chr2_1:65853009-65853028 Msa0218590:intron 60.0%
AGCTTGAACCTAGGGCCAGG+GGG + chr2_1:65853027-65853046 None:intergenic 60.0%
GAGCTTGAACCTAGGGCCAG+GGG + chr2_1:65853028-65853047 None:intergenic 60.0%
! TTTTCTCTCTTCGGCCGGGG+GGG - chr2_1:65854034-65854053 Msa0218590:intron 60.0%
CAGGGTGGAACTGCTTCTCC+AGG - chr2_1:65854544-65854563 Msa0218590:intron 60.0%
! GCAGTTGGTGCCCTTGTAGC+AGG - chr2_1:65854584-65854603 Msa0218590:intron 60.0%
TGCTGGGGAAACAGGCCAGA+AGG + chr2_1:65855465-65855484 None:intergenic 60.0%
GTCCAGAGTCACGCAGTGCA+TGG - chr2_1:65856306-65856325 Msa0218590:five_prime_UTR 60.0%
AACCTAGGGCCAGGGGGTAG+GGG + chr2_1:65853021-65853040 None:intergenic 65.0%
GAACCTAGGGCCAGGGGGTA+GGG + chr2_1:65853022-65853041 None:intergenic 65.0%
TGAACCTAGGGCCAGGGGGT+AGG + chr2_1:65853023-65853042 None:intergenic 65.0%
GCTCAAGGGCAGGAGCTCTG+AGG - chr2_1:65853215-65853234 Msa0218590:intron 65.0%
TTTCTCTCTTCGGCCGGGGG+GGG - chr2_1:65854035-65854054 Msa0218590:intron 65.0%
GGCGACGGTGGAGGTTACGG+TGG + chr2_1:65849296-65849315 None:intergenic 70.0%
ACCTAGGGCCAGGGGGTAGG+GGG + chr2_1:65853020-65853039 None:intergenic 70.0%
TTCTCTCTTCGGCCGGGGGG+GGG - chr2_1:65854036-65854055 Msa0218590:intron 70.0%
TCCCCCTACCCCCTGGCCCT+AGG - chr2_1:65853016-65853035 Msa0218590:intron 75.0%
TCTCTCTTCGGCCGGGGGGG+GGG - chr2_1:65854037-65854056 Msa0218590:intron 75.0%
! CTCTCTTCGGCCGGGGGGGG+GGG - chr2_1:65854038-65854057 Msa0218590:intron 80.0%
! TCTCTTCGGCCGGGGGGGGG+GGG - chr2_1:65854039-65854058 Msa0218590:intron 80.0%
! CTCTTCGGCCGGGGGGGGGG+GGG - chr2_1:65854040-65854059 Msa0218590:intron 85.0%
! TCTTCGGCCGGGGGGGGGGG+GGG - chr2_1:65854041-65854060 Msa0218590:intron 85.0%
! CTTCGGCCGGGGGGGGGGGG+GGG - chr2_1:65854042-65854061 Msa0218590:intron 90.0%
! TTCGGCCGGGGGGGGGGGGG+GGG - chr2_1:65854043-65854062 Msa0218590:intron 90.0%
! TCGGCCGGGGGGGGGGGGGG+GGG - chr2_1:65854044-65854063 Msa0218590:intron 95.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 65849135 65856474 65849135 ID=Msa0218590;Name=Msa0218590
chr2_1 mRNA 65849135 65856474 65849135 ID=Msa0218590-mRNA-1;Parent=Msa0218590;Name=Msa0218590-mRNA-1;_AED=0.13;_eAED=0.13;_QI=200|0.86|0.93|0.93|0.86|0.87|16|510|483
chr2_1 exon 65849135 65849538 65849135 ID=Msa0218590-mRNA-1:exon:18487;Parent=Msa0218590-mRNA-1
chr2_1 exon 65849646 65849729 65849646 ID=Msa0218590-mRNA-1:exon:18486;Parent=Msa0218590-mRNA-1
chr2_1 exon 65850160 65850277 65850160 ID=Msa0218590-mRNA-1:exon:18485;Parent=Msa0218590-mRNA-1
chr2_1 exon 65850386 65850429 65850386 ID=Msa0218590-mRNA-1:exon:18484;Parent=Msa0218590-mRNA-1
chr2_1 exon 65851004 65851086 65851004 ID=Msa0218590-mRNA-1:exon:18483;Parent=Msa0218590-mRNA-1
chr2_1 exon 65851589 65851669 65851589 ID=Msa0218590-mRNA-1:exon:18482;Parent=Msa0218590-mRNA-1
chr2_1 exon 65852091 65852136 65852091 ID=Msa0218590-mRNA-1:exon:18481;Parent=Msa0218590-mRNA-1
chr2_1 exon 65852239 65852404 65852239 ID=Msa0218590-mRNA-1:exon:18480;Parent=Msa0218590-mRNA-1
chr2_1 exon 65852491 65852571 65852491 ID=Msa0218590-mRNA-1:exon:18479;Parent=Msa0218590-mRNA-1
chr2_1 exon 65853269 65853354 65853269 ID=Msa0218590-mRNA-1:exon:18478;Parent=Msa0218590-mRNA-1
chr2_1 exon 65853674 65853758 65853674 ID=Msa0218590-mRNA-1:exon:18477;Parent=Msa0218590-mRNA-1
chr2_1 exon 65854453 65854543 65854453 ID=Msa0218590-mRNA-1:exon:18476;Parent=Msa0218590-mRNA-1
chr2_1 exon 65854660 65854745 65854660 ID=Msa0218590-mRNA-1:exon:18475;Parent=Msa0218590-mRNA-1
chr2_1 exon 65855046 65855116 65855046 ID=Msa0218590-mRNA-1:exon:18474;Parent=Msa0218590-mRNA-1
chr2_1 exon 65855649 65855721 65855649 ID=Msa0218590-mRNA-1:exon:18473;Parent=Msa0218590-mRNA-1
chr2_1 exon 65855912 65856474 65855912 ID=Msa0218590-mRNA-1:exon:18472;Parent=Msa0218590-mRNA-1
chr2_1 five_prime_UTR 65856275 65856474 65856275 ID=Msa0218590-mRNA-1:five_prime_utr;Parent=Msa0218590-mRNA-1
chr2_1 CDS 65855912 65856274 65855912 ID=Msa0218590-mRNA-1:cds;Parent=Msa0218590-mRNA-1
chr2_1 CDS 65855649 65855721 65855649 ID=Msa0218590-mRNA-1:cds;Parent=Msa0218590-mRNA-1
chr2_1 CDS 65855046 65855116 65855046 ID=Msa0218590-mRNA-1:cds;Parent=Msa0218590-mRNA-1
chr2_1 CDS 65854660 65854745 65854660 ID=Msa0218590-mRNA-1:cds;Parent=Msa0218590-mRNA-1
chr2_1 CDS 65854453 65854543 65854453 ID=Msa0218590-mRNA-1:cds;Parent=Msa0218590-mRNA-1
chr2_1 CDS 65853674 65853758 65853674 ID=Msa0218590-mRNA-1:cds;Parent=Msa0218590-mRNA-1
chr2_1 CDS 65853269 65853354 65853269 ID=Msa0218590-mRNA-1:cds;Parent=Msa0218590-mRNA-1
chr2_1 CDS 65852491 65852571 65852491 ID=Msa0218590-mRNA-1:cds;Parent=Msa0218590-mRNA-1
chr2_1 CDS 65852239 65852404 65852239 ID=Msa0218590-mRNA-1:cds;Parent=Msa0218590-mRNA-1
chr2_1 CDS 65852091 65852136 65852091 ID=Msa0218590-mRNA-1:cds;Parent=Msa0218590-mRNA-1
chr2_1 CDS 65851589 65851669 65851589 ID=Msa0218590-mRNA-1:cds;Parent=Msa0218590-mRNA-1
chr2_1 CDS 65851004 65851086 65851004 ID=Msa0218590-mRNA-1:cds;Parent=Msa0218590-mRNA-1
chr2_1 CDS 65850386 65850429 65850386 ID=Msa0218590-mRNA-1:cds;Parent=Msa0218590-mRNA-1
chr2_1 CDS 65850182 65850277 65850182 ID=Msa0218590-mRNA-1:cds;Parent=Msa0218590-mRNA-1
chr2_1 three_prime_UTR 65850160 65850181 65850160 ID=Msa0218590-mRNA-1:three_prime_utr;Parent=Msa0218590-mRNA-1
chr2_1 three_prime_UTR 65849646 65849729 65849646 ID=Msa0218590-mRNA-1:three_prime_utr;Parent=Msa0218590-mRNA-1
chr2_1 three_prime_UTR 65849135 65849538 65849135 ID=Msa0218590-mRNA-1:three_prime_utr;Parent=Msa0218590-mRNA-1
Gene Sequence

>Msa0218590

ATGGCTTTAACTCTAACTTCTCCTCACTTTCGCTTCCAACCTTTCCTCACGCGCACCAACTACCTCTTCTTCTCCGACCTCACCGAACCACAATTCCACGATTCTCTCACTCTTCTTCGCCGGAGCAAAATCTCCGTTACATCATCGCCTGCGCTCAAGCCGGTGAAATGCAGTAGATCCACGGAAGAAAAGCCGTGGAACGACGCTGAAACCGAAACCGTCGCGTCTGATTCCGATGAAGCTGTTGATGATGAATCAAACGGTCAAGCTCCGAGCAAAACTTCTTCAATAGAGTCTCCGAGGATTGCAACCACCTCTTCTGGAGATTCTCTATCGCTCGGAATTCGTGAACCTGTTTATGAAGTTGTAGAAGTGAAATCAGATGGGACAGTATCGACTAGAAAAATCAATAGAAGACAATTATTGAAGTCTAGTGGTCTTCGTCCACGGGACGTTAGAAGTGTGGATCCATCATTGTTTTTGACAAATTCAATGCCTTCTTTGCTGGTCCGTGAGTATGCTATACTTCTAAACTTGGGTTCACTACGAGCAATCGCAATGCAAGATTGTGTACTTATATTTGATTATAATCGTAAAGGAGGGCAAGCTTTTCTAGAGTCATTGCTGCCTCGGTTAAACCCCAAGAGCAACAATGGAGGGCCATCAATGCCATTTGAAATCGAGTGCTTAAGTGTAAAAGACGACGCAGAAGGATCTAAAGATGGTAACAATTCCATTGCAGAAGGCCAAGAAAAGTGTGGCCTTAAAAGTTGTCGAAGCAGCATTGCTTTCAAGAATACAACGTTTGGAGCGGAGACTGATGGACTTAGAACCTCGTGTGAGTATGGAAACACAGTTCAAGCTCTTCTTGAGGCCTTACCAAATCGGATAACTGGGGATATACTGGAGCAACTTCGTATTAGCAAACAAACTTTGGTTGAGTTAGGCTCAAGGGCAGGAGCTCTGAGGCAGATGCTGCTTGATCTTCTGGAGGACCCAGATGAAATACGGAGGATATGTATTATGGGAAGAAATTGTACAATAAATAAAGGAAACCATAATGTGGAATGCTCAGTGCCTTTAGACAAGCAGGTTGCTGAGGAGGAGGAGGAGGAAATTGAGATGCTTCTGGAAAATTATCTCCAAAGATGTGAATCTTGTCACGGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGCTGTCAGTTTGAGCTCACGGAGGCTTGAAGTTAGCAGGGTGGAACTGCTTCTCCAGGTTGGAACATTCTGTGTGGCAGTTGGTGCCCTTGTAGCAGGCATATTTGGCATGAACCTGAAGTCCTATCTTGAGGAACGTGTGTTTGCATTTTGGTTGACCACATCTGGGATTATTATTGGTGGCATTGTTGTTTTTTTTATTATGTATAACTACCTCAGAGCAAGGAAAATATTTTGA
Protein sequence

>Msa0218590

MALTLTSPHFRFQPFLTRTNYLFFSDLTEPQFHDSLTLLRRSKISVTSSPALKPVKCSRSTEEKPWNDAETETVASDSDEAVDDESNGQAPSKTSSIESPRIATTSSGDSLSLGIREPVYEVVEVKSDGTVSTRKINRRQLLKSSGLRPRDVRSVDPSLFLTNSMPSLLVREYAILLNLGSLRAIAMQDCVLIFDYNRKGGQAFLESLLPRLNPKSNNGGPSMPFEIECLSVKDDAEGSKDGNNSIAEGQEKCGLKSCRSSIAFKNTTFGAETDGLRTSCEYGNTVQALLEALPNRITGDILEQLRISKQTLVELGSRAGALRQMLLDLLEDPDEIRRICIMGRNCTINKGNHNVECSVPLDKQVAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVSLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLKSYLEERVFAFWLTTSGIIIGGIVVFFIMYNYLRARKIF*