AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0712440


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0712440 MtrunA17_Chr5g0396951 98.355 304 5 0 1 304 1 304 0.0 620
Msa0712440 MtrunA17_Chr4g0049381 71.475 305 85 2 1 304 1 304 6.05e-165 461
Msa0712440 MtrunA17_Chr7g0275331 69.508 305 91 2 1 304 1 304 7.37e-165 461
Msa0712440 MtrunA17_Chr2g0298101 66.897 290 94 1 17 304 14 303 6.77e-152 428
Msa0712440 MtrunA17_Chr6g0449291 53.793 290 131 3 15 304 3 289 1.17e-114 333
Msa0712440 MtrunA17_Chr4g0000451 65.294 170 57 1 137 304 6 175 1.92e-79 239
Msa0712440 MtrunA17_Chr4g0000441 68.421 114 36 0 22 135 33 146 1.78e-55 177
Msa0712440 MtrunA17_Chr5g0404381 33.564 289 173 7 15 301 41 312 3.17e-43 150
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0712440 AT4G23730.1 69.608 306 91 2 1 304 1 306 2.03e-165 462
Msa0712440 AT3G61610.1 74.138 290 74 1 16 304 15 304 3.51e-164 459
Msa0712440 AT3G61610.2 74.138 290 74 1 16 304 9 298 4.53e-164 459
Msa0712440 AT4G23730.3 68.269 312 91 3 1 304 1 312 9.86e-163 455
Msa0712440 AT4G23730.2 73.881 268 68 2 39 304 4 271 2.61e-154 432
Msa0712440 AT5G57330.1 67.354 291 93 1 16 304 9 299 1.57e-153 432
Msa0712440 AT3G01590.1 60.000 285 112 2 20 304 8 290 8.26e-130 372
Msa0712440 AT3G01590.2 60.000 285 112 2 20 304 8 290 8.26e-130 372
Msa0712440 AT5G14500.1 57.586 290 121 2 15 304 3 290 1.13e-129 371
Msa0712440 AT5G14500.2 53.016 315 121 3 15 304 3 315 1.68e-123 357
Msa0712440 AT4G25900.1 50.694 288 137 2 16 303 32 314 2.95e-111 325
Msa0712440 AT5G66530.4 33.677 291 172 9 13 300 6 278 1.93e-43 150
Msa0712440 AT5G66530.1 33.677 291 172 9 13 300 34 306 4.08e-43 150
Msa0712440 AT5G66530.2 33.677 291 172 9 13 300 34 306 4.08e-43 150
Msa0712440 AT5G66530.3 33.677 291 172 9 13 300 34 306 4.08e-43 150

Find 131 sgRNAs with CRISPR-Local

Find 220 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAAGTCAATAGTGGATTT+TGG 0.129984 5_1:-4282522 Msa0712440:CDS
CTCTTTGTATCTCTTGATTT+TGG 0.153081 5_1:-4284773 Msa0712440:five_prime_UTR
AACCTTAATAAAGCTTTAAA+TGG 0.190531 5_1:+4285387 None:intergenic
GATTATGGACCTTTCATTTC+AGG 0.210499 5_1:+4285424 None:intergenic
ATTCCTCCTCGTACTGGTTT+TGG 0.222742 5_1:+4283917 None:intergenic
GTCAACTGGGTCGTTTATTC+TGG 0.237336 5_1:-4285291 Msa0712440:five_prime_UTR
GACAGTGAAGTGAGGGTAGA+AGG 0.250795 5_1:-4283005 Msa0712440:intron
ACAAAATATTGAGGATAAAA+TGG 0.260033 5_1:+4284923 None:intergenic
CTCCATTTAAAGCTTTATTA+AGG 0.263109 5_1:-4285389 Msa0712440:five_prime_UTR
GAGGAAGACTTGGTGGATTA+TGG 0.293107 5_1:+4285409 None:intergenic
GTTGTAGTTAACTTTATAAA+AGG 0.296743 5_1:-4282093 Msa0712440:three_prime_UTR
CACATATAGTTGGAAGAAAT+TGG 0.297432 5_1:-4284709 Msa0712440:five_prime_UTR
TAATCTGTAAACCGTTAGTT+AGG 0.313002 5_1:+4285497 None:intergenic
GCCTGCTACCACTGTTGTGC+TGG 0.326166 5_1:+4285455 None:intergenic
CAACTTTGATGTGACAGAAT+TGG 0.327754 5_1:+4284602 None:intergenic
AAACAATAACCAATGCTTGA+TGG 0.340522 5_1:+4282332 None:intergenic
TACAACTCTGAATTGTCAAC+TGG 0.351270 5_1:-4285305 Msa0712440:five_prime_UTR
GATTTGCAAGGAATAAGATA+TGG 0.355587 5_1:-4283747 Msa0712440:CDS
AAAGGAGTATTTGTAGGAGT+TGG 0.357575 5_1:+4282042 None:intergenic
TTCATATTAAATTCCACAAT+AGG 0.357582 5_1:-4285207 Msa0712440:five_prime_UTR
TAATATGAAAATTGTTACTT+TGG 0.362563 5_1:+4285221 None:intergenic
CAGATAATAACTGAATTATT+AGG 0.363282 5_1:-4284820 Msa0712440:five_prime_UTR
TTACACATTGAATAGTTGTT+TGG 0.364398 5_1:-4282563 Msa0712440:intron
ACGGAGGGCAAGTTCTTTCA+TGG 0.380303 5_1:-4284227 Msa0712440:CDS
AAGGCTTGCCATTGACATTC+CGG 0.382320 5_1:+4283257 None:intergenic
TACGGACCTGATATCTGATA+TGG 0.394110 5_1:+4283201 None:intergenic
TAAATTTGAATTGAATGGTT+TGG 0.395726 5_1:+4285174 None:intergenic
ATATGAAAATCTTATTGAAA+AGG 0.401088 5_1:+4284861 None:intergenic
TTATCTCAATTCTAGCAGTA+TGG 0.402415 5_1:-4282778 Msa0712440:CDS
TGAAGCGTTCCTTCTGGTAT+AGG 0.403091 5_1:+4282955 None:intergenic
CTGAAGACGATATGAAGATA+TGG 0.407969 5_1:-4283648 Msa0712440:CDS
CGGCCGGTCCATTCTTCTCC+CGG 0.408566 5_1:+4282432 None:intergenic
TGTGTTAAATTTGAATTGAA+TGG 0.410209 5_1:+4285169 None:intergenic
GTTCTGTGAAGCGTTCCTTC+TGG 0.411774 5_1:+4282949 None:intergenic
TGAAGTGAGGGTAGAAGGGT+TGG 0.418375 5_1:-4283000 Msa0712440:CDS
ATTACCTGTGGAAAACAGAT+TGG 0.421320 5_1:+4283893 None:intergenic
GAAAGACACTTACCAACATC+TGG 0.431173 5_1:+4282699 None:intergenic
AAGGAGTATTTGTAGGAGTT+GGG 0.433989 5_1:+4282043 None:intergenic
ATTTCTCCATATCAGATATC+AGG 0.439981 5_1:-4283207 Msa0712440:intron
CAAGACAAAGGAGTATTTGT+AGG 0.445320 5_1:+4282036 None:intergenic
CAATTCTGTCACATCAAAGT+TGG 0.449100 5_1:-4284601 Msa0712440:five_prime_UTR
TGTTTCTAAATTCTAAGTAA+TGG 0.450840 5_1:+4284537 None:intergenic
ACTTTGAGAGTAACAATTCA+AGG 0.452042 5_1:+4284481 None:intergenic
GTTTCGCCTAAGTGTCTGTT+TGG 0.454174 5_1:-4283314 Msa0712440:CDS
ATTTCTAGATCACATATAGT+TGG 0.454310 5_1:-4284719 Msa0712440:five_prime_UTR
GAATAGTTGTTTGGAATCCC+TGG 0.459977 5_1:-4282554 Msa0712440:intron
CCATTTGAATCCGTGGGCAG+TGG 0.460101 5_1:+4283703 None:intergenic
AGAAGAATGGACCGGCCGCT+TGG 0.461091 5_1:-4282427 Msa0712440:CDS
GTTGTTCTTCGAAACGTTCG+AGG 0.461265 5_1:-4284369 Msa0712440:CDS
AAATCCGATAACCTTAAAAC+CGG 0.461715 5_1:-4282451 Msa0712440:CDS
TATGAAAATCTTATTGAAAA+GGG 0.465417 5_1:+4284862 None:intergenic
CCTTAAAACCGGGAGAAGAA+TGG 0.474210 5_1:-4282440 Msa0712440:CDS
TTACCTGTGGAAAACAGATT+GGG 0.476013 5_1:+4283894 None:intergenic
ATTGGGATTCCTCCTCGTAC+TGG 0.478898 5_1:+4283911 None:intergenic
AACATCAGTTGAAGTTATCA+AGG 0.479030 5_1:-4284412 Msa0712440:CDS
GAATCCGTGGGCAGTGGTGG+AGG 0.481987 5_1:+4283709 None:intergenic
TTGAAGTCAAGTCAAGTAGA+AGG 0.484710 5_1:+4282390 None:intergenic
AATCTGTAAACCGTTAGTTA+GGG 0.490789 5_1:+4285498 None:intergenic
GCTTTAAATGGAGGAAGACT+TGG 0.491945 5_1:+4285399 None:intergenic
ACAGTGAAGTGAGGGTAGAA+GGG 0.492013 5_1:-4283004 Msa0712440:intron
CCTTCTGGTATAGGTTATCC+AGG 0.493007 5_1:+4282964 None:intergenic
TCGTGAAGATTGAAAATGAA+AGG 0.494067 5_1:+4284686 None:intergenic
TGCTTTAACATTTGAATCTG+AGG 0.495159 5_1:-4282919 Msa0712440:intron
GGGGTCATACAACACTCAAA+AGG 0.495972 5_1:+4285518 None:intergenic
TTAAATGGAGGAAGACTTGG+TGG 0.503443 5_1:+4285402 None:intergenic
ACATATTAGTGATGTATATG+AGG 0.506124 5_1:-4282214 Msa0712440:three_prime_UTR
GTTATTGTTCACTAGTACCA+AGG 0.506527 5_1:-4284184 Msa0712440:intron
TGAATATGATATCTCGCATC+CGG 0.512657 5_1:-4283276 Msa0712440:CDS
AATGCAAAGCATACATAATG+AGG 0.512889 5_1:+4282149 None:intergenic
ATTTGCAAGGAATAAGATAT+GGG 0.514716 5_1:-4283746 Msa0712440:CDS
CCCAGCACAACAGTGGTAGC+AGG 0.515068 5_1:-4285456 Msa0712440:five_prime_UTR
TCTCGCATCCGGAATGTCAA+TGG 0.518066 5_1:-4283265 Msa0712440:CDS
TTCAGGTTAGCTTGCACGGA+GGG 0.519016 5_1:-4284242 Msa0712440:intron
TTTGAATCCGTGGGCAGTGG+TGG 0.520143 5_1:+4283706 None:intergenic
CCTGCTACCACTGTTGTGCT+GGG 0.521769 5_1:+4285456 None:intergenic
TGGACTTTCAACGCCTATTG+TGG 0.522765 5_1:+4285194 None:intergenic
ACAATTTCATCTACATGACT+TGG 0.525178 5_1:+4282114 None:intergenic
AATAGTTGTTTGGAATCCCT+GGG 0.525696 5_1:-4282553 Msa0712440:intron
CCACTGCCCACGGATTCAAA+TGG 0.526642 5_1:-4283703 Msa0712440:CDS
TTGTCACAAGAAAGTTGTCA+TGG 0.526878 5_1:-4284652 Msa0712440:five_prime_UTR
CTTAATAAAGCTTTAAATGG+AGG 0.530126 5_1:+4285390 None:intergenic
GGGTCATACAACACTCAAAA+GGG 0.530920 5_1:+4285519 None:intergenic
CATGTTGCTCTAGTGTTCCA+CGG 0.532159 5_1:+4283770 None:intergenic
AAACAGTCACATAATAATGA+AGG 0.533995 5_1:+4285040 None:intergenic
CCTTTCATTTCAGGTCAACA+AGG 0.535521 5_1:+4285433 None:intergenic
ATAAATAAACCATCAAGCAT+TGG 0.537410 5_1:-4282341 Msa0712440:three_prime_UTR
TTTCTTCTCATGATCTAGAA+CGG 0.537918 5_1:+4282752 None:intergenic
ATCTTCATATCGTCTTCAGA+TGG 0.538140 5_1:+4283652 None:intergenic
AACAGAAAGCTCCAAGCGGC+CGG 0.541122 5_1:+4282416 None:intergenic
TGCGTGGATGGTGCAGCAGT+TGG 0.542462 5_1:-4282474 Msa0712440:CDS
GTTGGAGACTCTTGACTACC+TGG 0.542710 5_1:-4282982 Msa0712440:CDS
AGTGTCTGTTTGGCAGCAGA+TGG 0.543732 5_1:-4283304 Msa0712440:CDS
AAGCAAATGCTCTGCGTGGA+TGG 0.557893 5_1:-4282486 Msa0712440:CDS
ATGTGTATATACTTGAAAAG+TGG 0.559564 5_1:+4282233 None:intergenic
GATCAATAATTAAGCGGCAA+AGG 0.565621 5_1:+4285133 None:intergenic
AACTGAATTATTAGGCCTAA+CGG 0.567176 5_1:-4284812 Msa0712440:five_prime_UTR
TACTTAGAATTTAGAAACAG+AGG 0.571105 5_1:-4284533 Msa0712440:five_prime_UTR
GAAATATGTATGAAATGCAA+AGG 0.575295 5_1:+4283225 None:intergenic
GAATCAAGAACAAAATATTG+AGG 0.576370 5_1:+4284914 None:intergenic
TGTCACAAGAAAGTTGTCAT+GGG 0.578918 5_1:-4284651 Msa0712440:five_prime_UTR
GATCTTTCAAACCCTTAAAG+CGG 0.583628 5_1:+4285329 None:intergenic
AAGGAAGGTCTTCCAGATGT+TGG 0.585878 5_1:-4282711 Msa0712440:intron
CGATTATTGACAGTGAAGTG+AGG 0.590022 5_1:-4283013 Msa0712440:intron
AAATCCTCCACCACTGCCCA+CGG 0.590093 5_1:-4283713 Msa0712440:CDS
AAGGAACGCTTCACAGAACA+AGG 0.595906 5_1:-4282945 Msa0712440:CDS
ATATGTGATCAATAATTAAG+CGG 0.605838 5_1:+4285127 None:intergenic
AAACCGGGAGAAGAATGGAC+CGG 0.609197 5_1:-4282435 Msa0712440:CDS
CCTTGTTGACCTGAAATGAA+AGG 0.609996 5_1:-4285433 Msa0712440:five_prime_UTR
GTTGTATGACCCCTAACTAA+CGG 0.618883 5_1:-4285508 Msa0712440:five_prime_UTR
AATGCAAAGGAGAAACTGAA+AGG 0.627775 5_1:+4283238 None:intergenic
GATTATTGACAGTGAAGTGA+GGG 0.633522 5_1:-4283012 Msa0712440:intron
ACGAACATTTGTGATACGAA+AGG 0.635723 5_1:-4282730 Msa0712440:CDS
ATATGAAGATATGGCCACAT+AGG 0.635993 5_1:-4283639 Msa0712440:intron
CCTGGATAACCTATACCAGA+AGG 0.640312 5_1:-4282964 Msa0712440:CDS
ATCTGTAAACCGTTAGTTAG+GGG 0.642974 5_1:+4285499 None:intergenic
CGTGGAACACTAGAGCAACA+TGG 0.643884 5_1:-4283769 Msa0712440:CDS
TAAAGCGCGTCGCACCTATG+TGG 0.646274 5_1:+4283625 None:intergenic
TAGAGCAACATGGATTTGCA+AGG 0.656362 5_1:-4283759 Msa0712440:CDS
TTTCAGGTTAGCTTGCACGG+AGG 0.662583 5_1:-4284243 Msa0712440:intron
TCTCAATCCCAGCACAACAG+TGG 0.662845 5_1:-4285463 Msa0712440:five_prime_UTR
ACATTTGTGATACGAAAGGA+AGG 0.663497 5_1:-4282726 Msa0712440:CDS
CTGCTGCCAAACAGACACTT+AGG 0.663675 5_1:+4283308 None:intergenic
CGTTCGAGGAGCTTCAGCAA+CGG 0.664112 5_1:-4284355 Msa0712440:intron
CTTTCATGGAAAACAGAACG+CGG 0.670837 5_1:-4284213 Msa0712440:CDS
ACAACTCTGAATTGTCAACT+GGG 0.674618 5_1:-4285304 Msa0712440:five_prime_UTR
TGCGAGATATCATATTCAGA+CGG 0.674803 5_1:+4283281 None:intergenic
AATCCGATAACCTTAAAACC+GGG 0.679316 5_1:-4282450 Msa0712440:CDS
GTACAAGCAAATGCTCTGCG+TGG 0.681422 5_1:-4282490 Msa0712440:CDS
CCTCCAAAACCAGTACGAGG+AGG 0.735431 5_1:-4283920 Msa0712440:CDS
GTACAACAGAAAGCTCCAAG+CGG 0.740861 5_1:+4282412 None:intergenic
ACTCCTCCAAAACCAGTACG+AGG 0.754632 5_1:-4283923 Msa0712440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCAAAAAAAAAAAAAAAGA+AGG + chr5_1:4282498-4282517 None:intergenic 10.0%
!!! ATGTCTTTTTTATTTTAATA+TGG + chr5_1:4282594-4282613 None:intergenic 10.0%
!!! AATTTAACTTGATAAATATA+AGG + chr5_1:4284708-4284727 None:intergenic 10.0%
!!! TAATATGAAAATTGTTACTT+TGG + chr5_1:4282351-4282370 None:intergenic 15.0%
!!! TTTTGAAGAATTAATGAAAT+GGG + chr5_1:4282566-4282585 None:intergenic 15.0%
!!! ATTTTGAAGAATTAATGAAA+TGG + chr5_1:4282567-4282586 None:intergenic 15.0%
!!! CTTTTTTATTTTAATATGGA+CGG + chr5_1:4282590-4282609 None:intergenic 15.0%
!! TATGAAAATCTTATTGAAAA+GGG + chr5_1:4282710-4282729 None:intergenic 15.0%
!! ATATGAAAATCTTATTGAAA+AGG + chr5_1:4282711-4282730 None:intergenic 15.0%
!!! TACAAAGAGTTATATATTTT+TGG + chr5_1:4282785-4282804 None:intergenic 15.0%
!!! ACATTTTACAAACAAAATTA+AGG + chr5_1:4283579-4283598 None:intergenic 15.0%
!! ATATAGATAGATAGATAATA+AGG - chr5_1:4283745-4283764 Msa0712440:CDS 15.0%
!! AAAATTTAAAAACGAACAAA+AGG + chr5_1:4284484-4284503 None:intergenic 15.0%
!!! AACCTTAATAAAGCTTTAAA+TGG + chr5_1:4282185-4282204 None:intergenic 20.0%
!! TTCATATTAAATTCCACAAT+AGG - chr5_1:4282362-4282381 Msa0712440:three_prime_UTR 20.0%
!! TAAATTTGAATTGAATGGTT+TGG + chr5_1:4282398-4282417 None:intergenic 20.0%
!! TGTGTTAAATTTGAATTGAA+TGG + chr5_1:4282403-4282422 None:intergenic 20.0%
!! ATATGTGATCAATAATTAAG+CGG + chr5_1:4282445-4282464 None:intergenic 20.0%
!!! TTGTCAATTTTTTGTAATTG+AGG + chr5_1:4282622-4282641 None:intergenic 20.0%
!! ACAAAATATTGAGGATAAAA+TGG + chr5_1:4282649-4282668 None:intergenic 20.0%
!! CAGATAATAACTGAATTATT+AGG - chr5_1:4282749-4282768 Msa0712440:CDS 20.0%
!!! ATAACTGATAAATCAGTTTT+TGG - chr5_1:4283006-4283025 Msa0712440:intron 20.0%
!!! TGTTTCTAAATTCTAAGTAA+TGG + chr5_1:4283035-4283054 None:intergenic 20.0%
!! CAAACAAAATTAAGGTTAAT+TGG + chr5_1:4283571-4283590 None:intergenic 20.0%
!! TATATAGATTTCTGTAATTC+AGG + chr5_1:4283730-4283749 None:intergenic 20.0%
!!! AGCATTTTACTTATGAATTT+GGG - chr5_1:4283995-4284014 Msa0712440:intron 20.0%
!! GCTATATATAGAACTATTAA+AGG - chr5_1:4284051-4284070 Msa0712440:intron 20.0%
!!! CAAGATCAATTATTTTATCA+AGG - chr5_1:4284419-4284438 Msa0712440:CDS 20.0%
!! CAAAATCTAAGTACTATAAT+TGG - chr5_1:4284919-4284938 Msa0712440:five_prime_UTR 20.0%
!! GTTGTAGTTAACTTTATAAA+AGG - chr5_1:4285476-4285495 Msa0712440:five_prime_UTR 20.0%
!! AAAAAAAAGAAAGATTTGAC+AGG - chr5_1:4285501-4285520 Msa0712440:five_prime_UTR 20.0%
!!! CTTAATAAAGCTTTAAATGG+AGG + chr5_1:4282182-4282201 None:intergenic 25.0%
!!! CTCCATTTAAAGCTTTATTA+AGG - chr5_1:4282180-4282199 Msa0712440:three_prime_UTR 25.0%
!! TAACTTTTAAACCGCTTTAA+GGG - chr5_1:4282229-4282248 Msa0712440:three_prime_UTR 25.0%
! AAACAGTCACATAATAATGA+AGG + chr5_1:4282532-4282551 None:intergenic 25.0%
! GAATCAAGAACAAAATATTG+AGG + chr5_1:4282658-4282677 None:intergenic 25.0%
!! ATTTCTAGATCACATATAGT+TGG - chr5_1:4282850-4282869 Msa0712440:intron 25.0%
! TACTTAGAATTTAGAAACAG+AGG - chr5_1:4283036-4283055 Msa0712440:intron 25.0%
!!! TTTTTTGAGATGAATCATTC+TGG - chr5_1:4283113-4283132 Msa0712440:intron 25.0%
! AGATAGATAGATAATAAGGT+TGG - chr5_1:4283749-4283768 Msa0712440:CDS 25.0%
!!! TGGTGTGATTTATTTTAGTT+TGG - chr5_1:4283773-4283792 Msa0712440:CDS 25.0%
! ATTTGCAAGGAATAAGATAT+GGG - chr5_1:4283823-4283842 Msa0712440:intron 25.0%
! CAAATTCATAAGTAAAATGC+TGG + chr5_1:4283996-4284015 None:intergenic 25.0%
!! CAGCATTTTACTTATGAATT+TGG - chr5_1:4283994-4284013 Msa0712440:intron 25.0%
!! GCATTTTACTTATGAATTTG+GGG - chr5_1:4283996-4284015 Msa0712440:intron 25.0%
!! CATTTTACTTATGAATTTGG+GGG - chr5_1:4283997-4284016 Msa0712440:intron 25.0%
! AATAACTGAGATAAATTGAG+AGG - chr5_1:4284029-4284048 Msa0712440:intron 25.0%
! TAGAACTATTAAAGGACTAT+TGG - chr5_1:4284059-4284078 Msa0712440:intron 25.0%
!! TTGTTATTATATACGAACTG+GGG + chr5_1:4284157-4284176 None:intergenic 25.0%
!!! CTTGTTATTATATACGAACT+GGG + chr5_1:4284158-4284177 None:intergenic 25.0%
!!! ACTTGTTATTATATACGAAC+TGG + chr5_1:4284159-4284178 None:intergenic 25.0%
! GAAATATGTATGAAATGCAA+AGG + chr5_1:4284347-4284366 None:intergenic 25.0%
!!! ATAGTACTTAGATTTTGAGT+CGG + chr5_1:4284916-4284935 None:intergenic 25.0%
! ATTCAATGTGTAAATTGACA+TGG + chr5_1:4284999-4285018 None:intergenic 25.0%
! TTACACATTGAATAGTTGTT+TGG - chr5_1:4285006-4285025 Msa0712440:five_prime_UTR 25.0%
! GAAAAAATCAAAGTCAATAG+TGG - chr5_1:4285040-4285059 Msa0712440:five_prime_UTR 25.0%
! ATAAATAAACCATCAAGCAT+TGG - chr5_1:4285228-4285247 Msa0712440:five_prime_UTR 25.0%
!! TGATATTGCTCATGATTTTT+AGG + chr5_1:4285280-4285299 None:intergenic 25.0%
! ATGTGTATATACTTGAAAAG+TGG + chr5_1:4285339-4285358 None:intergenic 25.0%
! ACATATTAGTGATGTATATG+AGG - chr5_1:4285355-4285374 Msa0712440:five_prime_UTR 25.0%
AATCTGTAAACCGTTAGTTA+GGG + chr5_1:4282074-4282093 None:intergenic 30.0%
TAATCTGTAAACCGTTAGTT+AGG + chr5_1:4282075-4282094 None:intergenic 30.0%
! CTAACTTTTAAACCGCTTTA+AGG - chr5_1:4282228-4282247 Msa0712440:three_prime_UTR 30.0%
! TCACATATTTTCTCTGTCTA+CGG - chr5_1:4282457-4282476 Msa0712440:CDS 30.0%
!! ATGTGACTGTTTCTTTTAAC+TGG - chr5_1:4282540-4282559 Msa0712440:CDS 30.0%
AACTGAATTATTAGGCCTAA+CGG - chr5_1:4282757-4282776 Msa0712440:CDS 30.0%
!!! TATATATTTTTGGCACCGTT+AGG + chr5_1:4282775-4282794 None:intergenic 30.0%
! CTCTTTGTATCTCTTGATTT+TGG - chr5_1:4282796-4282815 Msa0712440:intron 30.0%
CACATATAGTTGGAAGAAAT+TGG - chr5_1:4282860-4282879 Msa0712440:intron 30.0%
TCGTGAAGATTGAAAATGAA+AGG + chr5_1:4282886-4282905 None:intergenic 30.0%
! ACTTTGAGAGTAACAATTCA+AGG + chr5_1:4283091-4283110 None:intergenic 30.0%
AACATCAGTTGAAGTTATCA+AGG - chr5_1:4283157-4283176 Msa0712440:intron 30.0%
GAAGTTATCAAGGACAAAAA+TGG - chr5_1:4283167-4283186 Msa0712440:intron 30.0%
! TCTACCCTTTTGAATTTGAT+TGG - chr5_1:4283280-4283299 Msa0712440:CDS 30.0%
AGCACCAATCAAATTCAAAA+GGG + chr5_1:4283287-4283306 None:intergenic 30.0%
TAGCACCAATCAAATTCAAA+AGG + chr5_1:4283288-4283307 None:intergenic 30.0%
CAAAAAAACCTCATTTACCT+TGG + chr5_1:4283405-4283424 None:intergenic 30.0%
! TATATGTGATAGTGATTCGT+AGG - chr5_1:4283526-4283545 Msa0712440:intron 30.0%
ATTTCTCTCTCTTTCCAATT+AGG - chr5_1:4283615-4283634 Msa0712440:intron 30.0%
! CTACTATCTAAAATTACCTG+TGG + chr5_1:4283691-4283710 None:intergenic 30.0%
! AGATAGATAATAAGGTTGGT+TGG - chr5_1:4283753-4283772 Msa0712440:CDS 30.0%
!!! TTATTTTAGTTTGGAAACCG+TGG - chr5_1:4283782-4283801 Msa0712440:intron 30.0%
GATTTGCAAGGAATAAGATA+TGG - chr5_1:4283822-4283841 Msa0712440:intron 30.0%
!! GCGATTCATTTTTCTTTGTA+AGG + chr5_1:4284094-4284113 None:intergenic 30.0%
ATCTTGAGAATTGAGATTGT+TGG - chr5_1:4284190-4284209 Msa0712440:CDS 30.0%
ATTTCTCCATATCAGATATC+AGG - chr5_1:4284362-4284381 Msa0712440:CDS 30.0%
!! TTATCTTGAAAGTGTTGGAA+TGG + chr5_1:4284396-4284415 None:intergenic 30.0%
! TGATCTTATCTTGAAAGTGT+TGG + chr5_1:4284401-4284420 None:intergenic 30.0%
TCAATAATCGGCAAAAGTTA+AGG + chr5_1:4284546-4284565 None:intergenic 30.0%
TGCTTTAACATTTGAATCTG+AGG - chr5_1:4284650-4284669 Msa0712440:five_prime_UTR 30.0%
! GCATGTTGGTAAAATTTCAA+GGG + chr5_1:4284740-4284759 None:intergenic 30.0%
! AGCATGTTGGTAAAATTTCA+AGG + chr5_1:4284741-4284760 None:intergenic 30.0%
! GAAATTTTACCAACATGCTA+AGG - chr5_1:4284742-4284761 Msa0712440:five_prime_UTR 30.0%
TTATCTCAATTCTAGCAGTA+TGG - chr5_1:4284791-4284810 Msa0712440:five_prime_UTR 30.0%
TTTCTTCTCATGATCTAGAA+CGG + chr5_1:4284820-4284839 None:intergenic 30.0%
AATGTGTAAATTGACATGGA+TGG + chr5_1:4284995-4285014 None:intergenic 30.0%
!!! TCAAAGTCAATAGTGGATTT+TGG - chr5_1:4285047-4285066 Msa0712440:five_prime_UTR 30.0%
!!! CAAAGTCAATAGTGGATTTT+GGG - chr5_1:4285048-4285067 Msa0712440:five_prime_UTR 30.0%
!!! AAAGTCAATAGTGGATTTTG+GGG - chr5_1:4285049-4285068 Msa0712440:five_prime_UTR 30.0%
AAATCCGATAACCTTAAAAC+CGG - chr5_1:4285118-4285137 Msa0712440:five_prime_UTR 30.0%
AAACAATAACCAATGCTTGA+TGG + chr5_1:4285240-4285259 None:intergenic 30.0%
AATGCAAAGCATACATAATG+AGG + chr5_1:4285423-4285442 None:intergenic 30.0%
ACAATTTCATCTACATGACT+TGG + chr5_1:4285458-4285477 None:intergenic 30.0%
ATCTGTAAACCGTTAGTTAG+GGG + chr5_1:4282073-4282092 None:intergenic 35.0%
GATTATGGACCTTTCATTTC+AGG + chr5_1:4282148-4282167 None:intergenic 35.0%
GATCTTTCAAACCCTTAAAG+CGG + chr5_1:4282243-4282262 None:intergenic 35.0%
TACAACTCTGAATTGTCAAC+TGG - chr5_1:4282264-4282283 Msa0712440:three_prime_UTR 35.0%
ACAACTCTGAATTGTCAACT+GGG - chr5_1:4282265-4282284 Msa0712440:three_prime_UTR 35.0%
GATCAATAATTAAGCGGCAA+AGG + chr5_1:4282439-4282458 None:intergenic 35.0%
TTGTCACAAGAAAGTTGTCA+TGG - chr5_1:4282917-4282936 Msa0712440:intron 35.0%
TGTCACAAGAAAGTTGTCAT+GGG - chr5_1:4282918-4282937 Msa0712440:intron 35.0%
CAACTTTGATGTGACAGAAT+TGG + chr5_1:4282970-4282989 None:intergenic 35.0%
CAATTCTGTCACATCAAAGT+TGG - chr5_1:4282968-4282987 Msa0712440:CDS 35.0%
CAAATTCAAAAGGGTAGATG+CGG + chr5_1:4283278-4283297 None:intergenic 35.0%
GTTATTGTTCACTAGTACCA+AGG - chr5_1:4283385-4283404 Msa0712440:intron 35.0%
AGTGCTACATAGGAAATAAC+TGG + chr5_1:4283430-4283449 None:intergenic 35.0%
TTACCTGTGGAAAACAGATT+GGG + chr5_1:4283678-4283697 None:intergenic 35.0%
ATTACCTGTGGAAAACAGAT+TGG + chr5_1:4283679-4283698 None:intergenic 35.0%
ATCTTCATATCGTCTTCAGA+TGG + chr5_1:4283920-4283939 None:intergenic 35.0%
CTGAAGACGATATGAAGATA+TGG - chr5_1:4283921-4283940 Msa0712440:CDS 35.0%
ATATGAAGATATGGCCACAT+AGG - chr5_1:4283930-4283949 Msa0712440:CDS 35.0%
! GTATCTAGCTACATGCTTTT+GGG + chr5_1:4284135-4284154 None:intergenic 35.0%
TGCGAGATATCATATTCAGA+CGG + chr5_1:4284291-4284310 None:intergenic 35.0%
TGAATATGATATCTCGCATC+CGG - chr5_1:4284293-4284312 Msa0712440:intron 35.0%
AATGCAAAGGAGAAACTGAA+AGG + chr5_1:4284334-4284353 None:intergenic 35.0%
CTCACTTCACTGTCAATAAT+CGG + chr5_1:4284558-4284577 None:intergenic 35.0%
GATTATTGACAGTGAAGTGA+GGG - chr5_1:4284557-4284576 Msa0712440:five_prime_UTR 35.0%
! TAACATTTGAATCTGAGGTG+AGG - chr5_1:4284655-4284674 Msa0712440:five_prime_UTR 35.0%
CAAATAAGACCTTAGCATGT+TGG + chr5_1:4284754-4284773 None:intergenic 35.0%
!! GCTAAGGTCTTATTTGTGTT+AGG - chr5_1:4284758-4284777 Msa0712440:five_prime_UTR 35.0%
!! AAGGTCTTATTTGTGTTAGG+TGG - chr5_1:4284761-4284780 Msa0712440:five_prime_UTR 35.0%
ACGAACATTTGTGATACGAA+AGG - chr5_1:4284839-4284858 Msa0712440:five_prime_UTR 35.0%
ACATTTGTGATACGAAAGGA+AGG - chr5_1:4284843-4284862 Msa0712440:five_prime_UTR 35.0%
! AATAGTTGTTTGGAATCCCT+GGG - chr5_1:4285016-4285035 Msa0712440:five_prime_UTR 35.0%
!!! GACTTTGATTTTTTCTCCCA+GGG + chr5_1:4285035-4285054 None:intergenic 35.0%
!!! TGACTTTGATTTTTTCTCCC+AGG + chr5_1:4285036-4285055 None:intergenic 35.0%
AATCCGATAACCTTAAAACC+GGG - chr5_1:4285119-4285138 Msa0712440:five_prime_UTR 35.0%
TTGAAGTCAAGTCAAGTAGA+AGG + chr5_1:4285182-4285201 None:intergenic 35.0%
GGGTCATACAACACTCAAAA+GGG + chr5_1:4282053-4282072 None:intergenic 40.0%
GTTGTATGACCCCTAACTAA+CGG - chr5_1:4282061-4282080 Msa0712440:three_prime_UTR 40.0%
! CCTTTCATTTCAGGTCAACA+AGG + chr5_1:4282139-4282158 None:intergenic 40.0%
CCTTGTTGACCTGAAATGAA+AGG - chr5_1:4282136-4282155 Msa0712440:three_prime_UTR 40.0%
TTAAATGGAGGAAGACTTGG+TGG + chr5_1:4282170-4282189 None:intergenic 40.0%
! GCTTTAAATGGAGGAAGACT+TGG + chr5_1:4282173-4282192 None:intergenic 40.0%
!! GTTGTGTGTGTGACTTTTTC+AGG - chr5_1:4283310-4283329 Msa0712440:CDS 40.0%
!!! CTTTTTCAGGTTAGCTTGCA+CGG - chr5_1:4283323-4283342 Msa0712440:CDS 40.0%
CTTTCATGGAAAACAGAACG+CGG - chr5_1:4283356-4283375 Msa0712440:intron 40.0%
CACTAGTACCAAGGTAAATG+AGG - chr5_1:4283394-4283413 Msa0712440:intron 40.0%
! GCACTGACACTTCGAATTAA+AGG - chr5_1:4283445-4283464 Msa0712440:intron 40.0%
! CTTCGAATTAAAGGCATGTC+CGG - chr5_1:4283454-4283473 Msa0712440:intron 40.0%
ACACCAATCATAGAAGTGAC+CGG + chr5_1:4283476-4283495 None:intergenic 40.0%
!!! TGGTTTTGGAGGAGTATAGA+CGG + chr5_1:4283641-4283660 None:intergenic 40.0%
! AATCCCAATCTGTTTTCCAC+AGG - chr5_1:4283672-4283691 Msa0712440:CDS 40.0%
TAGAGCAACATGGATTTGCA+AGG - chr5_1:4283810-4283829 Msa0712440:intron 40.0%
! GCTTTTCCATTTGAATCCGT+GGG + chr5_1:4283875-4283894 None:intergenic 40.0%
! AGCTTTTCCATTTGAATCCG+TGG + chr5_1:4283876-4283895 None:intergenic 40.0%
AAATGAATCGCATCCAAGAG+AGG - chr5_1:4284103-4284122 Msa0712440:intron 40.0%
!!! TTTTGGGATTTCTCCTCTCT+TGG + chr5_1:4284119-4284138 None:intergenic 40.0%
! GGTATCTAGCTACATGCTTT+TGG + chr5_1:4284136-4284155 None:intergenic 40.0%
TACGGACCTGATATCTGATA+TGG + chr5_1:4284371-4284390 None:intergenic 40.0%
!! GAAAGTGTTGGAATGGCATA+CGG + chr5_1:4284389-4284408 None:intergenic 40.0%
CGATTATTGACAGTGAAGTG+AGG - chr5_1:4284556-4284575 Msa0712440:five_prime_UTR 40.0%
GAAAGACACTTACCAACATC+TGG + chr5_1:4284873-4284892 None:intergenic 40.0%
! GAATAGTTGTTTGGAATCCC+TGG - chr5_1:4285015-4285034 Msa0712440:five_prime_UTR 40.0%
!!! TCTCCCGGTTTTAAGGTTAT+CGG + chr5_1:4285125-4285144 None:intergenic 40.0%
GGGGTCATACAACACTCAAA+AGG + chr5_1:4282054-4282073 None:intergenic 45.0%
!! GAGGAAGACTTGGTGGATTA+TGG + chr5_1:4282163-4282182 None:intergenic 45.0%
GTCAACTGGGTCGTTTATTC+TGG - chr5_1:4282278-4282297 Msa0712440:three_prime_UTR 45.0%
TGGACTTTCAACGCCTATTG+TGG + chr5_1:4282378-4282397 None:intergenic 45.0%
GTTGTTCTTCGAAACGTTCG+AGG - chr5_1:4283200-4283219 Msa0712440:intron 45.0%
! TCGAAGTGTCAGTGCTACAT+AGG + chr5_1:4283440-4283459 None:intergenic 45.0%
TGTCCGGTCACTTCTATGAT+TGG - chr5_1:4283470-4283489 Msa0712440:intron 45.0%
!! ATCAGACACAGCACTGATAC+TGG + chr5_1:4283507-4283526 None:intergenic 45.0%
! AGGAGTATAGACGGCCTAAT+TGG + chr5_1:4283632-4283651 None:intergenic 45.0%
!!! ATTCCTCCTCGTACTGGTTT+TGG + chr5_1:4283655-4283674 None:intergenic 45.0%
CATGTTGCTCTAGTGTTCCA+CGG + chr5_1:4283802-4283821 None:intergenic 45.0%
GTTTCGCCTAAGTGTCTGTT+TGG - chr5_1:4284255-4284274 Msa0712440:intron 45.0%
AAGGCTTGCCATTGACATTC+CGG + chr5_1:4284315-4284334 None:intergenic 45.0%
ACAGTGAAGTGAGGGTAGAA+GGG - chr5_1:4284565-4284584 Msa0712440:five_prime_UTR 45.0%
CCTTCTGGTATAGGTTATCC+AGG + chr5_1:4284608-4284627 None:intergenic 45.0%
CCTGGATAACCTATACCAGA+AGG - chr5_1:4284605-4284624 Msa0712440:five_prime_UTR 45.0%
! TGAAGCGTTCCTTCTGGTAT+AGG + chr5_1:4284617-4284636 None:intergenic 45.0%
AAGGAACGCTTCACAGAACA+AGG - chr5_1:4284624-4284643 Msa0712440:five_prime_UTR 45.0%
AAGGAAGGTCTTCCAGATGT+TGG - chr5_1:4284858-4284877 Msa0712440:five_prime_UTR 45.0%
! CCATTCTTCTCCCGGTTTTA+AGG + chr5_1:4285132-4285151 None:intergenic 45.0%
CCTTAAAACCGGGAGAAGAA+TGG - chr5_1:4285129-4285148 Msa0712440:five_prime_UTR 45.0%
GTACAACAGAAAGCTCCAAG+CGG + chr5_1:4285160-4285179 None:intergenic 45.0%
TCTCAATCCCAGCACAACAG+TGG - chr5_1:4282106-4282125 Msa0712440:three_prime_UTR 50.0%
!! TTTCAGGTTAGCTTGCACGG+AGG - chr5_1:4283326-4283345 Msa0712440:intron 50.0%
!! TTCAGGTTAGCTTGCACGGA+GGG - chr5_1:4283327-4283346 Msa0712440:intron 50.0%
ACGGAGGGCAAGTTCTTTCA+TGG - chr5_1:4283342-4283361 Msa0712440:intron 50.0%
ACTCCTCCAAAACCAGTACG+AGG - chr5_1:4283646-4283665 Msa0712440:CDS 50.0%
ATTGGGATTCCTCCTCGTAC+TGG + chr5_1:4283661-4283680 None:intergenic 50.0%
CGTGGAACACTAGAGCAACA+TGG - chr5_1:4283800-4283819 Msa0712440:intron 50.0%
CTGCTGCCAAACAGACACTT+AGG + chr5_1:4284264-4284283 None:intergenic 50.0%
AGTGTCTGTTTGGCAGCAGA+TGG - chr5_1:4284265-4284284 Msa0712440:intron 50.0%
TCTCGCATCCGGAATGTCAA+TGG - chr5_1:4284304-4284323 Msa0712440:intron 50.0%
GACAGTGAAGTGAGGGTAGA+AGG - chr5_1:4284564-4284583 Msa0712440:five_prime_UTR 50.0%
TGAAGTGAGGGTAGAAGGGT+TGG - chr5_1:4284569-4284588 Msa0712440:five_prime_UTR 50.0%
GTTGGAGACTCTTGACTACC+TGG - chr5_1:4284587-4284606 Msa0712440:five_prime_UTR 50.0%
! GTTCTGTGAAGCGTTCCTTC+TGG + chr5_1:4284623-4284642 None:intergenic 50.0%
GTACAAGCAAATGCTCTGCG+TGG - chr5_1:4285079-4285098 Msa0712440:five_prime_UTR 50.0%
AAGCAAATGCTCTGCGTGGA+TGG - chr5_1:4285083-4285102 Msa0712440:five_prime_UTR 50.0%
AAACCGGGAGAAGAATGGAC+CGG - chr5_1:4285134-4285153 Msa0712440:five_prime_UTR 50.0%
CCTGCTACCACTGTTGTGCT+GGG + chr5_1:4282116-4282135 None:intergenic 55.0%
CGTTCGAGGAGCTTCAGCAA+CGG - chr5_1:4283214-4283233 Msa0712440:CDS 55.0%
!!! CCTCCTCGTACTGGTTTTGG+AGG + chr5_1:4283652-4283671 None:intergenic 55.0%
CCTCCAAAACCAGTACGAGG+AGG - chr5_1:4283649-4283668 Msa0712440:CDS 55.0%
AAATCCTCCACCACTGCCCA+CGG - chr5_1:4283856-4283875 Msa0712440:intron 55.0%
TTTGAATCCGTGGGCAGTGG+TGG + chr5_1:4283866-4283885 None:intergenic 55.0%
CCATTTGAATCCGTGGGCAG+TGG + chr5_1:4283869-4283888 None:intergenic 55.0%
CCACTGCCCACGGATTCAAA+TGG - chr5_1:4283866-4283885 Msa0712440:intron 55.0%
TAAAGCGCGTCGCACCTATG+TGG + chr5_1:4283947-4283966 None:intergenic 55.0%
AACAGAAAGCTCCAAGCGGC+CGG + chr5_1:4285156-4285175 None:intergenic 55.0%
CCCAGCACAACAGTGGTAGC+AGG - chr5_1:4282113-4282132 Msa0712440:three_prime_UTR 60.0%
GCCTGCTACCACTGTTGTGC+TGG + chr5_1:4282117-4282136 None:intergenic 60.0%
TGCGTGGATGGTGCAGCAGT+TGG - chr5_1:4285095-4285114 Msa0712440:five_prime_UTR 60.0%
AGAAGAATGGACCGGCCGCT+TGG - chr5_1:4285142-4285161 Msa0712440:five_prime_UTR 60.0%
GAATCCGTGGGCAGTGGTGG+AGG + chr5_1:4283863-4283882 None:intergenic 65.0%
CGGCCGGTCCATTCTTCTCC+CGG + chr5_1:4285140-4285159 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 4282047 4285544 4282047 ID=Msa0712440;Name=Msa0712440
chr5_1 mRNA 4282047 4285544 4282047 ID=Msa0712440-mRNA-1;Parent=Msa0712440;Name=Msa0712440-mRNA-1;_AED=0.14;_eAED=0.14;_QI=1075|1|1|1|1|1|8|354|304
chr5_1 exon 4282047 4282570 4282047 ID=Msa0712440-mRNA-1:exon:1696;Parent=Msa0712440-mRNA-1
chr5_1 exon 4282712 4282811 4282712 ID=Msa0712440-mRNA-1:exon:1695;Parent=Msa0712440-mRNA-1
chr5_1 exon 4282920 4283022 4282920 ID=Msa0712440-mRNA-1:exon:1694;Parent=Msa0712440-mRNA-1
chr5_1 exon 4283208 4283342 4283208 ID=Msa0712440-mRNA-1:exon:1693;Parent=Msa0712440-mRNA-1
chr5_1 exon 4283640 4283800 4283640 ID=Msa0712440-mRNA-1:exon:1692;Parent=Msa0712440-mRNA-1
chr5_1 exon 4283898 4283954 4283898 ID=Msa0712440-mRNA-1:exon:1691;Parent=Msa0712440-mRNA-1
chr5_1 exon 4284185 4284259 4284185 ID=Msa0712440-mRNA-1:exon:1690;Parent=Msa0712440-mRNA-1
chr5_1 exon 4284356 4285544 4284356 ID=Msa0712440-mRNA-1:exon:1689;Parent=Msa0712440-mRNA-1
chr5_1 five_prime_UTR 4284470 4285544 4284470 ID=Msa0712440-mRNA-1:five_prime_utr;Parent=Msa0712440-mRNA-1
chr5_1 CDS 4284356 4284469 4284356 ID=Msa0712440-mRNA-1:cds;Parent=Msa0712440-mRNA-1
chr5_1 CDS 4284185 4284259 4284185 ID=Msa0712440-mRNA-1:cds;Parent=Msa0712440-mRNA-1
chr5_1 CDS 4283898 4283954 4283898 ID=Msa0712440-mRNA-1:cds;Parent=Msa0712440-mRNA-1
chr5_1 CDS 4283640 4283800 4283640 ID=Msa0712440-mRNA-1:cds;Parent=Msa0712440-mRNA-1
chr5_1 CDS 4283208 4283342 4283208 ID=Msa0712440-mRNA-1:cds;Parent=Msa0712440-mRNA-1
chr5_1 CDS 4282920 4283022 4282920 ID=Msa0712440-mRNA-1:cds;Parent=Msa0712440-mRNA-1
chr5_1 CDS 4282712 4282811 4282712 ID=Msa0712440-mRNA-1:cds;Parent=Msa0712440-mRNA-1
chr5_1 CDS 4282401 4282570 4282401 ID=Msa0712440-mRNA-1:cds;Parent=Msa0712440-mRNA-1
chr5_1 three_prime_UTR 4282047 4282400 4282047 ID=Msa0712440-mRNA-1:three_prime_utr;Parent=Msa0712440-mRNA-1
Gene Sequence

>Msa0712440

ATGAATCATTCTGGAGCTGAAAGTGATCATAAAATAACATCAGTTGAAGTTATCAAGGACAAAAATGGAATAGAACAAGTTGTTCTTCGAAACGTTCGAGGAGCTTCAGCAACGGTTAGCTTGCACGGAGGGCAAGTTCTTTCATGGAAAACAGAACGCGGTGAAGAGTTATTGTTCACTAGTACCAAGGCCGTCTATACTCCTCCAAAACCAGTACGAGGAGGAATCCCAATCTGTTTTCCACAGTTTGGAAACCGTGGAACACTAGAGCAACATGGATTTGCAAGGAATAAGATATGGGTTATCGATCAAAATCCTCCACCACTGCCCACGGATTCAAATGGAAAAGCTTGCATCGACTTGCTGCTCAAACCATCTGAAGACGATATGAAGATATGGCCACATAGCTTCGAGTTTCGCCTAAGTGTCTGTTTGGCAGCAGATGGCCGTCTGAATATGATATCTCGCATCCGGAATGTCAATGGCAAGCCTTTCAGTTTCTCCTTTGCATTTCATACATATTTCTCCATATCAGATATCAGTGAAGTGAGGGTAGAAGGGTTGGAGACTCTTGACTACCTGGATAACCTATACCAGAAGGAACGCTTCACAGAACAAGGAGATGCTTTAACATTTGAATCTGAGGTGGATCGAGTTTATCTCAATTCTAGCAGTATGGTAGCCGTTCTAGATCATGAGAAGAAACGAACATTTGTGATACGAAAGGAAGGTCTTCCAGATGTTGTTGTTTGGAATCCCTGGGAGAAAAAATCAAAGTCAATAGTGGATTTTGGGGATGAAGAGTACAAGCAAATGCTCTGCGTGGATGGTGCAGCAGTTGGAAATCCGATAACCTTAAAACCGGGAGAAGAATGGACCGGCCGCTTGGAGCTTTCTGTTGTACCTTCTACTTGA

Protein sequence

>Msa0712440

MNHSGAESDHKITSVEVIKDKNGIEQVVLRNVRGASATVSLHGGQVLSWKTERGEELLFTSTKAVYTPPKPVRGGIPICFPQFGNRGTLEQHGFARNKIWVIDQNPPPLPTDSNGKACIDLLLKPSEDDMKIWPHSFEFRLSVCLAADGRLNMISRIRNVNGKPFSFSFAFHTYFSISDISEVRVEGLETLDYLDNLYQKERFTEQGDALTFESEVDRVYLNSSSMVAVLDHEKKRTFVIRKEGLPDVVVWNPWEKKSKSIVDFGDEEYKQMLCVDGAAVGNPITLKPGEEWTGRLELSVVPST*