AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0869450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0869450 MtrunA17_Chr6g0451051 83.333 162 20 1 1 162 1 155 1.47e-95 273
Msa0869450 MtrunA17_Chr6g0451031 66.917 133 40 3 1 133 1 129 2.28e-60 183
Msa0869450 MtrunA17_Chr6g0451041 79.381 97 19 1 59 154 3 99 9.84e-51 157
Msa0869450 MtrunA17_Chr3g0117821 42.308 130 65 3 1 120 3 132 1.33e-32 113
Msa0869450 MtrunA17_Chr3g0123631 32.886 149 96 2 3 147 1 149 3.29e-22 87.8
Msa0869450 MtrunA17_Chr3g0123641 32.895 152 98 2 3 150 1 152 9.46e-22 87.8
Msa0869450 MtrunA17_Chr6g0486651 30.968 155 99 3 3 151 45 197 7.33e-19 82.0
Msa0869450 MtrunA17_Chr4g0059281 32.331 133 77 3 3 122 49 181 6.84e-18 78.6
Msa0869450 MtrunA17_Chr2g0295571 34.959 123 59 2 37 141 86 205 1.70e-17 77.4
Msa0869450 MtrunA17_Chr6g0451161 34.091 132 68 3 3 118 76 204 4.38e-17 77.0
Msa0869450 MtrunA17_Chr2g0307411 37.719 114 67 2 3 116 34 143 1.08e-16 73.6
Msa0869450 MtrunA17_Chr3g0143301 31.667 120 78 2 5 124 7 122 2.04e-16 71.2
Msa0869450 MtrunA17_Chr8g0364881 43.421 76 43 0 47 122 68 143 2.31e-16 74.7
Msa0869450 MtrunA17_Chr2g0297011 41.975 81 47 0 43 123 72 152 3.49e-16 71.6
Msa0869450 MtrunA17_Chr3g0132491 35.000 120 66 4 7 116 62 179 3.65e-16 74.3
Msa0869450 MtrunA17_Chr4g0027761 37.234 94 56 2 45 138 98 188 4.56e-16 72.0
Msa0869450 MtrunA17_Chr4g0073141 46.154 91 46 2 69 157 140 229 5.02e-16 74.3
Msa0869450 MtrunA17_Chr5g0407431 35.514 107 62 2 46 150 76 177 7.51e-16 71.6
Msa0869450 MtrunA17_Chr5g0413841 36.735 98 62 0 24 121 93 190 7.58e-16 73.6
Msa0869450 MtrunA17_Chr5g0427431 42.105 76 44 0 43 118 130 205 1.64e-15 72.8
Msa0869450 MtrunA17_Chr1g0198201 31.818 110 61 3 39 138 53 158 2.73e-15 70.5
Msa0869450 MtrunA17_Chr1g0157091 35.088 114 66 4 5 116 7 114 3.22e-15 68.2
Msa0869450 MtrunA17_Chr1g0191601 29.365 126 73 4 3 116 49 170 3.31e-15 71.6
Msa0869450 MtrunA17_Chr7g0269491 44.118 68 36 1 53 118 72 139 4.59e-15 69.3
Msa0869450 MtrunA17_Chr7g0244851 35.227 88 57 0 45 132 79 166 7.74e-15 68.2
Msa0869450 MtrunA17_Chr3g0133001 40.789 76 45 0 43 118 126 201 8.48e-15 70.9
Msa0869450 MtrunA17_Chr3g0128771 39.744 78 45 1 40 115 84 161 9.10e-15 68.2
Msa0869450 MtrunA17_Chr3g0105441 41.000 100 51 3 54 150 118 212 9.26e-15 69.3
Msa0869450 MtrunA17_Chr8g0345361 39.024 82 49 1 53 134 98 178 1.33e-14 68.9
Msa0869450 MtrunA17_Chr5g0406031 39.189 74 43 1 44 115 158 231 1.35e-14 68.6
Msa0869450 MtrunA17_Chr4g0060981 45.833 72 38 1 47 118 149 219 1.46e-14 68.6
Msa0869450 MtrunA17_Chr5g0444161 36.585 82 50 1 42 121 152 233 1.61e-14 68.6
Msa0869450 MtrunA17_Chr2g0317671 42.308 78 42 1 42 116 125 202 1.87e-14 67.8
Msa0869450 MtrunA17_Chr2g0325141 28.462 130 79 2 3 118 7 136 2.50e-14 66.2
Msa0869450 MtrunA17_Chr3g0129671 42.697 89 39 3 47 135 120 196 2.63e-14 67.8
Msa0869450 MtrunA17_Chr7g0237871 31.056 161 93 5 1 153 78 228 3.09e-14 67.8
Msa0869450 MtrunA17_Chr8g0370171 42.466 73 40 1 46 116 69 141 3.46e-14 67.0
Msa0869450 MtrunA17_Chr8g0371291 39.130 69 38 1 47 115 158 222 3.58e-14 67.4
Msa0869450 MtrunA17_Chr5g0409201 30.769 130 75 4 7 123 16 143 3.68e-14 66.2
Msa0869450 MtrunA17_Chr8g0345381 46.154 52 28 0 73 124 53 104 5.58e-14 65.5
Msa0869450 MtrunA17_Chr5g0426881 32.824 131 80 4 5 127 69 199 6.67e-14 68.2
Msa0869450 MtrunA17_Chr1g0203541 39.759 83 42 2 64 142 127 205 6.86e-14 66.2
Msa0869450 MtrunA17_Chr6g0470751 29.787 141 91 3 6 140 58 196 8.63e-14 67.4
Msa0869450 MtrunA17_Chr4g0067591 36.986 73 44 1 46 118 79 149 1.34e-13 66.6
Msa0869450 MtrunA17_Chr5g0433861 34.400 125 70 4 7 120 30 153 1.69e-13 66.6
Msa0869450 MtrunA17_Chr2g0327791 36.364 110 53 4 46 148 101 200 1.92e-13 65.5
Msa0869450 MtrunA17_Chr4g0010171 32.576 132 73 4 1 124 41 164 2.22e-13 64.7
Msa0869450 MtrunA17_Chr2g0301871 43.939 66 34 1 56 118 63 128 2.60e-13 65.9
Msa0869450 MtrunA17_Chr8g0343571 35.714 84 54 0 59 142 71 154 2.88e-13 63.9
Msa0869450 MtrunA17_Chr3g0144241 55.319 47 21 0 72 118 103 149 3.05e-13 64.3
Msa0869450 MtrunA17_Chr8g0383931 55.556 45 20 0 72 116 140 184 3.11e-13 65.1
Msa0869450 MtrunA17_Chr7g0276591 39.706 68 40 1 53 120 82 148 3.64e-13 65.5
Msa0869450 MtrunA17_Chr8g0383901 56.818 44 19 0 72 115 130 173 3.80e-13 64.7
Msa0869450 MtrunA17_Chr7g0273051 27.068 133 85 3 3 126 44 173 4.07e-13 65.9
Msa0869450 MtrunA17_Chr3g0112041 31.683 101 58 2 20 120 170 259 4.48e-13 65.1
Msa0869450 MtrunA17_Chr8g0383941 40.845 71 41 1 46 115 106 176 4.69e-13 64.3
Msa0869450 MtrunA17_Chr3g0126931 34.118 85 56 0 53 137 107 191 5.56e-13 65.5
Msa0869450 MtrunA17_Chr8g0345401 41.509 53 31 0 73 125 49 101 6.51e-13 62.4
Msa0869450 MtrunA17_Chr8g0383881 41.892 74 40 2 44 115 100 172 7.19e-13 63.9
Msa0869450 MtrunA17_Chr8g0383871 40.845 71 41 1 46 115 111 181 7.55e-13 63.9
Msa0869450 MtrunA17_Chr2g0300331 39.316 117 61 5 36 144 125 239 7.63e-13 63.9
Msa0869450 MtrunA17_Chr8g0383861 41.892 74 40 2 44 115 110 182 8.32e-13 63.9
Msa0869450 MtrunA17_Chr8g0383921 40.845 71 41 1 46 115 110 180 1.01e-12 63.2
Msa0869450 MtrunA17_Chr1g0186661 30.714 140 78 4 31 151 81 220 1.08e-12 64.3
Msa0869450 MtrunA17_Chr3g0113811 30.827 133 85 4 3 128 30 162 1.14e-12 62.4
Msa0869450 MtrunA17_Chr3g0118071 32.540 126 65 6 7 116 26 147 1.39e-12 63.2
Msa0869450 MtrunA17_Chr8g0369571 32.727 110 67 2 11 116 27 133 1.57e-12 62.4
Msa0869450 MtrunA17_Chr5g0437361 36.047 86 49 2 35 116 63 146 1.79e-12 62.0
Msa0869450 MtrunA17_Chr5g0409211 29.530 149 76 5 5 134 14 152 2.30e-12 61.6
Msa0869450 MtrunA17_Chr1g0184171 31.522 92 59 2 34 124 93 181 2.85e-12 63.2
Msa0869450 MtrunA17_Chr8g0366561 49.057 53 27 0 72 124 141 193 3.10e-12 63.2
Msa0869450 MtrunA17_Chr5g0444141 32.075 106 62 3 26 121 163 268 3.11e-12 62.8
Msa0869450 MtrunA17_Chr4g0052671 52.174 46 22 0 73 118 106 151 3.76e-12 60.8
Msa0869450 MtrunA17_Chr4g0031911 39.759 83 40 3 60 138 192 268 4.11e-12 62.4
Msa0869450 MtrunA17_Chr7g0274711 37.333 75 47 0 72 146 95 169 5.08e-12 60.8
Msa0869450 MtrunA17_Chr8g0336881 37.681 69 40 1 53 118 82 150 5.87e-12 62.4
Msa0869450 MtrunA17_Chr4g0030831 38.235 68 40 1 53 118 90 157 6.38e-12 60.5
Msa0869450 MtrunA17_Chr1g0184631 38.462 78 47 1 72 148 96 173 7.05e-12 60.5
Msa0869450 MtrunA17_Chr2g0305161 50.943 53 25 1 66 118 135 186 8.02e-12 60.5
Msa0869450 MtrunA17_Chr4g0073131 45.205 73 31 2 73 142 102 168 8.15e-12 60.5
Msa0869450 MtrunA17_Chr7g0274741 51.111 45 22 0 72 116 98 142 8.40e-12 60.5
Msa0869450 MtrunA17_Chr7g0275601 38.043 92 50 3 32 122 73 158 9.74e-12 59.7
Msa0869450 MtrunA17_Chr3g0126611 29.508 122 73 3 5 116 256 374 1.14e-11 61.6
Msa0869450 MtrunA17_Chr1g0169651 53.191 47 21 1 72 118 682 727 1.86e-11 61.2
Msa0869450 MtrunA17_Chr2g0325161 39.130 69 36 1 56 118 100 168 1.92e-11 60.1
Msa0869450 MtrunA17_Chr5g0430781 36.047 86 49 2 46 128 86 168 2.19e-11 59.7
Msa0869450 MtrunA17_Chr4g0065171 36.458 96 48 4 25 118 445 529 2.83e-11 60.8
Msa0869450 MtrunA17_Chr3g0124531 38.261 115 54 6 5 118 16 114 3.06e-11 58.5
Msa0869450 MtrunA17_Chr3g0138451 40.909 66 38 1 73 138 317 381 3.51e-11 60.1
Msa0869450 MtrunA17_Chr4g0031921 42.667 75 34 3 64 138 203 268 4.09e-11 59.7
Msa0869450 MtrunA17_Chr3g0081611 44.444 54 27 1 62 115 100 150 5.31e-11 58.2
Msa0869450 MtrunA17_Chr8g0381731 29.592 98 67 1 48 143 149 246 5.49e-11 59.3
Msa0869450 MtrunA17_Chr5g0411081 46.809 47 25 0 72 118 147 193 6.04e-11 59.7
Msa0869450 MtrunA17_Chr8g0347461 31.034 87 57 2 53 136 117 203 7.16e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0869450 AT3G48030.2 31.694 183 96 7 5 162 49 227 6.51e-20 84.0
Msa0869450 AT3G48030.1 31.720 186 92 8 5 162 127 305 1.78e-19 84.0
Msa0869450 AT4G28890.1 36.735 98 61 1 34 131 85 181 1.90e-17 78.6
Msa0869450 AT5G01880.1 43.038 79 43 1 37 115 71 147 3.32e-17 74.3
Msa0869450 AT1G23980.1 45.205 73 40 0 48 120 119 191 7.29e-17 76.6
Msa0869450 AT5G57750.1 36.207 116 65 2 35 141 83 198 8.11e-17 74.7
Msa0869450 AT3G16720.1 35.455 110 59 3 37 146 86 183 1.32e-16 75.5
Msa0869450 AT1G74410.1 45.205 73 40 0 46 118 149 221 1.61e-16 73.9
Msa0869450 AT4G09110.1 33.613 119 70 3 3 116 52 166 1.69e-16 75.1
Msa0869450 AT1G72310.1 32.143 112 71 3 48 155 103 213 1.00e-15 73.2
Msa0869450 AT4G40070.1 32.317 164 100 6 3 162 50 206 1.90e-15 72.4
Msa0869450 AT1G53820.1 42.308 78 37 2 71 143 118 192 2.18e-15 72.0
Msa0869450 AT5G40250.1 31.214 173 89 6 5 147 52 224 3.76e-15 72.0
Msa0869450 AT3G60220.1 39.773 88 45 2 53 132 94 181 6.40e-15 71.2
Msa0869450 AT4G09120.1 33.613 119 70 3 3 116 52 166 6.58e-15 71.2
Msa0869450 AT3G05200.1 29.054 148 88 4 3 141 49 188 6.60e-15 71.2
Msa0869450 AT2G17450.1 38.750 80 42 1 46 118 68 147 7.29e-15 68.9
Msa0869450 AT2G20030.1 35.135 111 63 2 48 150 99 208 8.17e-15 71.2
Msa0869450 AT4G30400.1 48.438 64 32 1 53 115 113 176 8.27e-15 71.2
Msa0869450 AT3G14320.1 40.789 76 44 1 43 118 59 133 1.09e-14 68.9
Msa0869450 AT5G05810.1 45.455 66 36 0 53 118 126 191 1.44e-14 70.5
Msa0869450 AT2G18650.1 56.250 48 21 0 69 116 122 169 1.45e-14 70.5
Msa0869450 AT4G30370.1 41.667 72 42 0 47 118 89 160 1.92e-14 67.8
Msa0869450 AT4G09130.1 33.058 121 71 2 35 145 79 199 2.15e-14 69.7
Msa0869450 AT3G62690.1 36.364 88 56 0 31 118 71 158 2.66e-14 68.6
Msa0869450 AT2G17730.1 37.805 82 47 2 38 115 157 238 3.03e-14 68.2
Msa0869450 AT4G09100.1 40.506 79 44 1 43 118 52 130 3.04e-14 66.2
Msa0869450 AT5G66160.2 33.871 124 74 5 7 128 170 287 4.27e-14 68.6
Msa0869450 AT2G27940.1 33.577 137 67 4 1 116 50 183 5.22e-14 67.4
Msa0869450 AT4G35840.1 37.333 75 44 1 44 115 159 233 5.77e-14 67.4
Msa0869450 AT2G18670.1 42.466 73 41 1 47 118 83 155 6.50e-14 66.2
Msa0869450 AT5G42200.1 33.333 114 74 1 5 116 34 147 7.93e-14 65.9
Msa0869450 AT1G20823.1 39.241 79 47 1 41 118 78 156 1.36e-13 65.9
Msa0869450 AT1G71980.1 53.846 52 22 2 65 115 224 274 1.69e-13 67.4
Msa0869450 AT3G03550.1 33.663 101 62 1 53 148 139 239 2.02e-13 67.0
Msa0869450 AT1G76410.1 40.506 79 46 1 41 118 71 149 2.31e-13 65.1
Msa0869450 AT3G10910.1 42.647 68 39 0 48 115 89 156 2.66e-13 64.7
Msa0869450 AT3G20395.1 39.437 71 41 2 45 115 145 213 4.13e-13 65.1
Msa0869450 AT5G17600.1 28.571 133 83 3 37 161 106 234 4.68e-13 65.9
Msa0869450 AT2G44581.1 34.783 115 58 4 6 118 16 115 7.21e-13 62.8
Msa0869450 AT5G27420.1 29.655 145 96 3 9 148 56 199 7.44e-13 65.5
Msa0869450 AT1G35330.1 38.961 77 44 1 43 116 96 172 7.69e-13 65.1
Msa0869450 AT5G05280.1 38.158 76 46 1 46 121 87 161 8.18e-13 63.2
Msa0869450 AT2G47560.1 37.333 75 45 1 46 118 79 153 1.13e-12 63.9
Msa0869450 AT2G44578.1 33.913 115 63 4 5 118 13 115 1.14e-12 62.4
Msa0869450 AT3G18930.2 45.614 57 31 0 62 118 145 201 1.17e-12 65.1
Msa0869450 AT3G18930.3 45.614 57 31 0 62 118 145 201 1.17e-12 65.1
Msa0869450 AT3G18930.1 45.614 57 31 0 62 118 145 201 1.17e-12 65.1
Msa0869450 AT3G18773.1 28.221 163 112 5 1 159 54 215 1.29e-12 63.5
Msa0869450 AT4G17905.2 36.190 105 59 3 48 147 159 260 1.36e-12 64.7
Msa0869450 AT2G42360.1 40.000 75 44 1 45 118 79 153 1.48e-12 63.5
Msa0869450 AT4G17905.1 36.190 105 59 3 48 147 133 234 1.70e-12 64.3
Msa0869450 AT1G32361.1 41.270 63 35 1 53 115 136 196 1.73e-12 64.3
Msa0869450 AT2G42350.1 40.278 72 42 1 45 116 73 143 1.78e-12 63.2
Msa0869450 AT2G35420.1 28.462 130 75 4 5 120 30 155 2.14e-12 63.5
Msa0869450 AT1G49220.1 29.197 137 85 4 20 154 89 215 2.35e-12 63.2
Msa0869450 AT5G66070.5 46.667 45 24 0 71 115 174 218 2.62e-12 62.8
Msa0869450 AT5G66070.1 46.667 45 24 0 71 115 174 218 2.62e-12 62.8
Msa0869450 AT4G35480.1 40.000 65 36 1 54 118 97 158 3.37e-12 62.0
Msa0869450 AT5G66070.2 46.667 45 24 0 71 115 198 242 5.02e-12 62.4
Msa0869450 AT1G49210.1 29.808 104 71 2 46 148 107 209 5.17e-12 62.0
Msa0869450 AT1G49200.1 31.356 118 78 3 1 115 61 178 5.91e-12 62.0
Msa0869450 AT3G60966.1 44.643 56 31 0 63 118 52 107 6.18e-12 60.1
Msa0869450 AT4G15975.1 41.667 48 28 0 71 118 74 121 7.22e-12 61.6
Msa0869450 AT1G72200.1 31.452 124 73 5 3 116 66 187 8.78e-12 62.4
Msa0869450 AT1G14200.1 36.986 73 44 2 43 115 80 150 1.08e-11 60.5
Msa0869450 AT1G49230.1 52.273 44 21 0 72 115 130 173 1.43e-11 60.8
Msa0869450 AT1G53010.1 39.623 53 32 0 64 116 121 173 1.87e-11 59.7
Msa0869450 AT2G46493.1 27.273 121 78 2 5 115 60 180 2.01e-11 59.7
Msa0869450 AT2G35000.1 40.541 74 41 1 46 116 105 178 2.04e-11 61.2
Msa0869450 AT1G28040.1 34.483 87 52 1 35 116 210 296 2.64e-11 60.8
Msa0869450 AT5G43420.1 36.047 86 50 2 72 152 137 222 4.10e-11 60.5
Msa0869450 AT2G25410.1 30.000 120 74 2 5 116 253 370 4.28e-11 60.5
Msa0869450 AT3G55530.1 43.396 53 29 1 63 115 201 252 4.46e-11 60.1
Msa0869450 AT1G04360.1 31.193 109 65 3 46 144 100 208 4.47e-11 60.5
Msa0869450 AT4G33565.1 39.130 69 35 1 61 122 205 273 4.77e-11 60.1
Msa0869450 AT2G17730.2 36.364 77 45 2 38 110 157 233 6.62e-11 59.3
Msa0869450 AT1G22500.1 35.821 67 40 1 53 116 95 161 9.84e-11 59.3
Msa0869450 AT3G47990.3 57.447 47 19 1 72 118 177 222 9.90e-11 58.9
Msa0869450 AT3G47990.5 57.447 47 19 1 72 118 177 222 9.90e-11 58.9
Msa0869450 AT3G47990.4 57.447 47 19 1 72 118 177 222 9.90e-11 58.9

Find 29 sgRNAs with CRISPR-Local

Find 31 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTATGTTGCAAAAGAAAA+TGG 0.230340 6_1:+3610199 Msa0869450:CDS
TTGTCCAATTTGTAGATCTA+TGG 0.257672 6_1:+3610351 Msa0869450:CDS
GTTTGGAGAATTTCACTATT+GGG 0.290326 6_1:+3610248 Msa0869450:CDS
AGTGCAAACAAAGTTGTTAT+AGG 0.302873 6_1:+3610385 Msa0869450:CDS
GCTCTATTACTAATATTTGT+AGG 0.310118 6_1:+3610037 Msa0869450:CDS
CAGGAAAACATATACGAAAT+AGG 0.312839 6_1:-3610075 None:intergenic
TGTTTGGAGAATTTCACTAT+TGG 0.324990 6_1:+3610247 Msa0869450:CDS
TTTAGATTGTGCAATTTGTT+TGG 0.325499 6_1:+3610231 Msa0869450:CDS
ATTTGTAGGACTAGTGCTTT+TGG 0.332746 6_1:+3610051 Msa0869450:CDS
CCAACCATAGATCTACAAAT+TGG 0.357467 6_1:-3610355 None:intergenic
GAGCAACAACAATGGTTGAT+AGG 0.371915 6_1:+3610128 Msa0869450:CDS
AAGCTTCTCTAAATCAACTT+TGG 0.406813 6_1:-3610167 None:intergenic
AACAAATTGCACAATCTAAA+GGG 0.417519 6_1:-3610228 None:intergenic
AGATCTACAAATTGGACAAA+TGG 0.421145 6_1:-3610347 None:intergenic
ATGCTCAATGTGTGGATCAA+TGG 0.439509 6_1:+3610311 Msa0869450:CDS
TGTGATTCTACTTCAAATGT+TGG 0.442241 6_1:-3610478 None:intergenic
AAACAAATTGCACAATCTAA+AGG 0.442477 6_1:-3610229 None:intergenic
AGTTATATGAGTATGAGATT+AGG 0.461054 6_1:+3610103 Msa0869450:CDS
AGCAACAACAATGGTTGATA+GGG 0.465961 6_1:+3610129 Msa0869450:CDS
CCAATTTGTAGATCTATGGT+TGG 0.498208 6_1:+3610355 Msa0869450:CDS
TCTCTAAATCAACTTTGGAA+AGG 0.515540 6_1:-3610162 None:intergenic
TTTGGAGAATTTCACTATTG+GGG 0.528111 6_1:+3610249 Msa0869450:CDS
ATACTCATATAACTCTCAGC+AGG 0.552332 6_1:-3610094 None:intergenic
AAAGTTGTTATAGGTAACAA+TGG 0.569424 6_1:+3610394 Msa0869450:CDS
TGAAAATTGTGCTTGCAAGT+AGG 0.575339 6_1:-3610289 None:intergenic
GGAAGAGAAAGCATAGAAAG+TGG 0.597369 6_1:+3610415 Msa0869450:CDS
GCAACAACAATGGTTGATAG+GGG 0.635210 6_1:+3610130 Msa0869450:CDS
TTTGCAACATAATCATAACA+TGG 0.646690 6_1:-3610190 None:intergenic
ATTAGGAAGAGCAACAACAA+TGG 0.675773 6_1:+3610120 Msa0869450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! GCTCTATTACTAATATTTGT+AGG + chr6_1:3610037-3610056 Msa0869450:CDS 25.0%
! AGTTATATGAGTATGAGATT+AGG + chr6_1:3610103-3610122 Msa0869450:CDS 25.0%
! TTTGCAACATAATCATAACA+TGG - chr6_1:3610193-3610212 None:intergenic 25.0%
! GATTATGTTGCAAAAGAAAA+TGG + chr6_1:3610199-3610218 Msa0869450:CDS 25.0%
! AACAAATTGCACAATCTAAA+GGG - chr6_1:3610231-3610250 None:intergenic 25.0%
! AAACAAATTGCACAATCTAA+AGG - chr6_1:3610232-3610251 None:intergenic 25.0%
!! TTTAGATTGTGCAATTTGTT+TGG + chr6_1:3610231-3610250 Msa0869450:CDS 25.0%
! AAAGTTGTTATAGGTAACAA+TGG + chr6_1:3610394-3610413 Msa0869450:CDS 25.0%
CAGGAAAACATATACGAAAT+AGG - chr6_1:3610078-3610097 None:intergenic 30.0%
! TCTCTAAATCAACTTTGGAA+AGG - chr6_1:3610165-3610184 None:intergenic 30.0%
AAGCTTCTCTAAATCAACTT+TGG - chr6_1:3610170-3610189 None:intergenic 30.0%
TGTTTGGAGAATTTCACTAT+TGG + chr6_1:3610247-3610266 Msa0869450:CDS 30.0%
GTTTGGAGAATTTCACTATT+GGG + chr6_1:3610248-3610267 Msa0869450:CDS 30.0%
TTTGGAGAATTTCACTATTG+GGG + chr6_1:3610249-3610268 Msa0869450:CDS 30.0%
AGATCTACAAATTGGACAAA+TGG - chr6_1:3610350-3610369 None:intergenic 30.0%
TTGTCCAATTTGTAGATCTA+TGG + chr6_1:3610351-3610370 Msa0869450:CDS 30.0%
AGTGCAAACAAAGTTGTTAT+AGG + chr6_1:3610385-3610404 Msa0869450:CDS 30.0%
TGTGATTCTACTTCAAATGT+TGG - chr6_1:3610481-3610500 None:intergenic 30.0%
!! ATTTGTAGGACTAGTGCTTT+TGG + chr6_1:3610051-3610070 Msa0869450:CDS 35.0%
ATACTCATATAACTCTCAGC+AGG - chr6_1:3610097-3610116 None:intergenic 35.0%
ATTAGGAAGAGCAACAACAA+TGG + chr6_1:3610120-3610139 Msa0869450:CDS 35.0%
! AGCAACAACAATGGTTGATA+GGG + chr6_1:3610129-3610148 Msa0869450:CDS 35.0%
TGAAAATTGTGCTTGCAAGT+AGG - chr6_1:3610292-3610311 None:intergenic 35.0%
! CAATTTTCATGCTCAATGTG+TGG + chr6_1:3610303-3610322 Msa0869450:CDS 35.0%
CCAACCATAGATCTACAAAT+TGG - chr6_1:3610358-3610377 None:intergenic 35.0%
CCAATTTGTAGATCTATGGT+TGG + chr6_1:3610355-3610374 Msa0869450:CDS 35.0%
GAGCAACAACAATGGTTGAT+AGG + chr6_1:3610128-3610147 Msa0869450:CDS 40.0%
!! GCAACAACAATGGTTGATAG+GGG + chr6_1:3610130-3610149 Msa0869450:CDS 40.0%
ATGCTCAATGTGTGGATCAA+TGG + chr6_1:3610311-3610330 Msa0869450:CDS 40.0%
! GGAAGAGAAAGCATAGAAAG+TGG + chr6_1:3610415-3610434 Msa0869450:CDS 40.0%
! GTGTGGATCAATGGCTTTTG+AGG + chr6_1:3610320-3610339 Msa0869450:CDS 45.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 3610022 3610510 3610022 ID=Msa0869450;Name=Msa0869450
chr6_1 mRNA 3610022 3610510 3610022 ID=Msa0869450-mRNA-1;Parent=Msa0869450;Name=Msa0869450-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|162
chr6_1 exon 3610022 3610510 3610022 ID=Msa0869450-mRNA-1:exon:1094;Parent=Msa0869450-mRNA-1
chr6_1 CDS 3610022 3610510 3610022 ID=Msa0869450-mRNA-1:cds;Parent=Msa0869450-mRNA-1
Gene Sequence

>Msa0869450

ATGGAACTTACTATAGCTCTATTACTAATATTTGTAGGACTAGTGCTTTTGGTCCTATTTCGTATATGTTTTCCTGCTGAGAGTTATATGAGTATGAGATTAGGAAGAGCAACAACAATGGTTGATAGGGGAAGAAGAAGCCTTTCCAAAGTTGATTTAGAGAAGCTTCCATGTTATGATTATGTTGCAAAAGAAAATGGAAGTAACCCTTTAGATTGTGCAATTTGTTTGGAGAATTTCACTATTGGGGATAAATGTAGATTGTTACCTACTTGCAAGCACAATTTTCATGCTCAATGTGTGGATCAATGGCTTTTGAGGAATTCCATTTGTCCAATTTGTAGATCTATGGTTGGTTCTCATAGTGCAAACAAAGTTGTTATAGGTAACAATGGAAGAGAAAGCATAGAAAGTGGTTCATCTAGAAATGTTGTTATAGAATTAAGAGAAAATATTCCAACATTTGAAGTAGAATCACAAGAGCACTAA
Protein sequence

>Msa0869450

MELTIALLLIFVGLVLLVLFRICFPAESYMSMRLGRATTMVDRGRRSLSKVDLEKLPCYDYVAKENGSNPLDCAICLENFTIGDKCRLLPTCKHNFHAQCVDQWLLRNSICPICRSMVGSHSANKVVIGNNGRESIESGSSRNVVIELRENIPTFEVESQEH*