Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0887010 | XP_013452179.1 | 89.677 | 465 | 32 | 2 | 1 | 449 | 1 | 465 | 0.0 | 819 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0887010 | sp|F4JH46|DTX34_ARATH | 45.610 | 467 | 219 | 2 | 11 | 442 | 67 | 533 | 4.93e-146 | 430 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0887010 | A0A072U963 | 89.677 | 465 | 32 | 2 | 1 | 449 | 1 | 465 | 0.0 | 819 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020630 | Msa0887010 | 0.813979 | 1.945216e-51 | -8.615850e-47 |
| Msa0036150 | Msa0887010 | 0.804293 | 2.315961e-49 | -8.615850e-47 |
| Msa0038350 | Msa0887010 | -0.804342 | 2.261458e-49 | -8.615850e-47 |
| Msa0090040 | Msa0887010 | -0.818373 | 2.028065e-52 | -8.615850e-47 |
| Msa0607440 | Msa0887010 | 0.800999 | 1.107055e-48 | -8.615850e-47 |
| Msa0619330 | Msa0887010 | 0.813547 | 2.422483e-51 | -8.615850e-47 |
| Msa0647000 | Msa0887010 | 0.802578 | 5.248276e-49 | -8.615850e-47 |
| Msa0650360 | Msa0887010 | 0.805935 | 1.049950e-49 | -8.615850e-47 |
| Msa0660880 | Msa0887010 | -0.811922 | 5.492637e-51 | -8.615850e-47 |
| Msa0707780 | Msa0887010 | 0.809952 | 1.466837e-50 | -8.615850e-47 |
| Msa0716740 | Msa0887010 | -0.800498 | 1.400929e-48 | -8.615850e-47 |
| Msa0756480 | Msa0887010 | 0.830465 | 2.892146e-55 | -8.615850e-47 |
| Msa0760890 | Msa0887010 | 0.805733 | 1.157360e-49 | -8.615850e-47 |
| Msa0770430 | Msa0887010 | 0.813828 | 2.100491e-51 | -8.615850e-47 |
| Msa0775580 | Msa0887010 | 0.803741 | 3.016884e-49 | -8.615850e-47 |
| Msa0780140 | Msa0887010 | 0.802537 | 5.351415e-49 | -8.615850e-47 |
| Msa0792510 | Msa0887010 | 0.812508 | 4.093675e-51 | -8.615850e-47 |
| Msa0799290 | Msa0887010 | -0.804274 | 2.337488e-49 | -8.615850e-47 |
| Msa0811510 | Msa0887010 | 0.801107 | 1.052526e-48 | -8.615850e-47 |
| Msa0814780 | Msa0887010 | 0.811318 | 7.432363e-51 | -8.615850e-47 |
| Msa0835510 | Msa0887010 | 0.833794 | 4.344651e-56 | -8.615850e-47 |
| Msa0837510 | Msa0887010 | -0.804259 | 2.353851e-49 | -8.615850e-47 |
| Msa0837990 | Msa0887010 | 0.826646 | 2.420553e-54 | -8.615850e-47 |
| Msa0125440 | Msa0887010 | 0.815100 | 1.099223e-51 | -8.615850e-47 |
| Msa0125530 | Msa0887010 | 0.818957 | 1.494452e-52 | -8.615850e-47 |
| Msa0137120 | Msa0887010 | -0.810137 | 1.338689e-50 | -8.615850e-47 |
| Msa0159750 | Msa0887010 | 0.817370 | 3.415578e-52 | -8.615850e-47 |
| Msa0172370 | Msa0887010 | 0.809076 | 2.262464e-50 | -8.615850e-47 |
| Msa0217470 | Msa0887010 | 0.814321 | 1.635466e-51 | -8.615850e-47 |
| Msa0227500 | Msa0887010 | 0.808452 | 3.075446e-50 | -8.615850e-47 |
| Msa0389060 | Msa0887010 | 0.800621 | 1.322614e-48 | -8.615850e-47 |
| Msa0405250 | Msa0887010 | -0.806095 | 9.716366e-50 | -8.615850e-47 |
| Msa0409820 | Msa0887010 | 0.801869 | 7.346351e-49 | -8.615850e-47 |
| Msa0413740 | Msa0887010 | 0.823226 | 1.552087e-53 | -8.615850e-47 |
| Msa0416000 | Msa0887010 | 0.800824 | 1.202214e-48 | -8.615850e-47 |
| Msa0418000 | Msa0887010 | 0.807318 | 5.359863e-50 | -8.615850e-47 |
| Msa0450460 | Msa0887010 | 0.807989 | 3.859511e-50 | -8.615850e-47 |
| Msa0458790 | Msa0887010 | 0.809649 | 1.704916e-50 | -8.615850e-47 |
| Msa0264940 | Msa0887010 | -0.801499 | 8.747961e-49 | -8.615850e-47 |
| Msa0286790 | Msa0887010 | 0.822336 | 2.501792e-53 | -8.615850e-47 |
| Msa0296610 | Msa0887010 | 0.803347 | 3.641270e-49 | -8.615850e-47 |
| Msa0302990 | Msa0887010 | -0.807054 | 6.095188e-50 | -8.615850e-47 |
| Msa0312780 | Msa0887010 | 0.804090 | 2.551880e-49 | -8.615850e-47 |
| Msa0320540 | Msa0887010 | 0.801455 | 8.931111e-49 | -8.615850e-47 |
| Msa0334980 | Msa0887010 | 0.809994 | 1.436906e-50 | -8.615850e-47 |
| Msa0336270 | Msa0887010 | 0.804222 | 2.395618e-49 | -8.615850e-47 |
| Msa0350020 | Msa0887010 | 0.809756 | 1.616722e-50 | -8.615850e-47 |
| Msa0352200 | Msa0887010 | 0.813241 | 2.827101e-51 | -8.615850e-47 |
| Msa0498830 | Msa0887010 | 0.810575 | 1.076893e-50 | -8.615850e-47 |
| Msa0504730 | Msa0887010 | 0.805483 | 1.306193e-49 | -8.615850e-47 |
| Msa0505390 | Msa0887010 | 0.821172 | 4.651190e-53 | -8.615850e-47 |
| Msa0525240 | Msa0887010 | 0.824654 | 7.179730e-54 | -8.615850e-47 |
| Msa0530930 | Msa0887010 | 0.821831 | 3.275723e-53 | -8.615850e-47 |
| Msa0535020 | Msa0887010 | 0.806511 | 7.941110e-50 | -8.615850e-47 |
| Msa0535050 | Msa0887010 | 0.805258 | 1.455951e-49 | -8.615850e-47 |
| Msa0553520 | Msa0887010 | 0.807204 | 5.667407e-50 | -8.615850e-47 |
| Msa0574170 | Msa0887010 | 0.818634 | 1.769920e-52 | -8.615850e-47 |
| Msa0576420 | Msa0887010 | 0.806355 | 8.565336e-50 | -8.615850e-47 |
| Msa0591780 | Msa0887010 | 0.801437 | 9.007608e-49 | -8.615850e-47 |
| Msa0851740 | Msa0887010 | 0.802363 | 5.814577e-49 | -8.615850e-47 |
| Msa0863250 | Msa0887010 | 0.808448 | 3.081790e-50 | -8.615850e-47 |
| Msa0887000 | Msa0887010 | 0.823646 | 1.238146e-53 | -8.615850e-47 |
| Msa0887010 | Msa0951770 | 0.849912 | 2.384891e-60 | -8.615850e-47 |
| Msa0887010 | Msa0970050 | 0.855919 | 4.566054e-62 | -8.615850e-47 |
| Msa0887010 | Msa0981740 | 0.802112 | 6.547242e-49 | -8.615850e-47 |
| Msa0887010 | Msa0988500 | 0.805771 | 1.136501e-49 | -8.615850e-47 |
| Msa0887010 | Msa0988510 | 0.961423 | 1.099695e-119 | -8.615850e-47 |
| Msa0887010 | Msa1014350 | 0.819435 | 1.163234e-52 | -8.615850e-47 |
| Msa0887010 | Msa1018720 | 0.800274 | 1.556385e-48 | -8.615850e-47 |
| Msa0887010 | Msa1036350 | 0.835303 | 1.814824e-56 | -8.615850e-47 |
| Msa0887010 | Msa1038820 | 0.801492 | 8.775821e-49 | -8.615850e-47 |
| Msa0887010 | Msa1046610 | 0.813834 | 2.094248e-51 | -8.615850e-47 |
| Msa0887010 | Msa1054890 | 0.805148 | 1.535479e-49 | -8.615850e-47 |
| Msa0887010 | Msa1061520 | 0.804233 | 2.383055e-49 | -8.615850e-47 |
| Msa0887010 | Msa1076630 | 0.837543 | 4.884955e-57 | -8.615850e-47 |
| Msa0887010 | Msa1076680 | 0.806550 | 7.788887e-50 | -8.615850e-47 |
| Msa0887010 | Msa1080460 | 0.814382 | 1.584999e-51 | -8.615850e-47 |
| Msa0887010 | Msa1081700 | 0.809023 | 2.322803e-50 | -8.615850e-47 |
| Msa0887010 | Msa1093390 | 0.828262 | 9.914686e-55 | -8.615850e-47 |
| Msa0887010 | Msa1113210 | 0.815205 | 1.041321e-51 | -8.615850e-47 |
| Msa0887010 | Msa1126170 | 0.812022 | 5.224653e-51 | -8.615850e-47 |
| Msa0887010 | Msa1130650 | 0.821730 | 3.457111e-53 | -8.615850e-47 |
| Msa0887010 | Msa1133660 | 0.843201 | 1.620931e-58 | -8.615850e-47 |
| Msa0887010 | Msa1151960 | 0.813035 | 3.137214e-51 | -8.615850e-47 |
| Msa0887010 | Msa1161760 | 0.802335 | 5.889923e-49 | -8.615850e-47 |
| Msa0887010 | Msa1166370 | 0.801104 | 1.053693e-48 | -8.615850e-47 |
| Msa0887010 | Msa1167000 | 0.817737 | 2.823585e-52 | -8.615850e-47 |
| Msa0887010 | Msa1182830 | 0.826730 | 2.311065e-54 | -8.615850e-47 |
| Msa0887010 | Msa1201990 | 0.805155 | 1.530208e-49 | -8.615850e-47 |
| Msa0887010 | Msa1223460 | 0.816388 | 5.673066e-52 | -8.615850e-47 |
| Msa0887010 | Msa1226600 | 0.806919 | 6.510601e-50 | -8.615850e-47 |
| Msa0887010 | Msa1233770 | 0.831243 | 1.864139e-55 | -8.615850e-47 |
| Msa0887010 | Msa1254770 | 0.808227 | 3.435726e-50 | -8.615850e-47 |
| Msa0887010 | Msa1254800 | 0.808061 | 3.727167e-50 | -8.615850e-47 |
| Msa0887010 | Msa1264560 | 0.808216 | 3.454286e-50 | -8.615850e-47 |
| Msa0887010 | Msa1276080 | 0.821921 | 3.121358e-53 | -8.615850e-47 |
| Msa0887010 | Msa1295010 | 0.806858 | 6.708212e-50 | -8.615850e-47 |
| Msa0887010 | Msa1302150 | 0.802171 | 6.368161e-49 | -8.615850e-47 |
| Msa0887010 | Msa1326000 | 0.835221 | 1.903438e-56 | -8.615850e-47 |
| Msa0887010 | Msa1329990 | 0.811714 | 6.097860e-51 | -8.615850e-47 |
| Msa0887010 | Msa1371080 | -0.802475 | 5.512007e-49 | -8.615850e-47 |
| Msa0887010 | Msa1373910 | 0.812007 | 5.264212e-51 | -8.615850e-47 |
| Msa0887010 | Msa1373950 | 0.815732 | 7.950080e-52 | -8.615850e-47 |
| Msa0887010 | Msa1418200 | 0.801912 | 7.199139e-49 | -8.615850e-47 |
| Msa0887010 | Msa1435670 | 0.824310 | 8.650332e-54 | -8.615850e-47 |
| Msa0887010 | Msa1460310 | -0.805954 | 1.040029e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0887010 | MtrunA17_Chr6g0468531 | 86.157 | 484 | 32 | 2 | 1 | 449 | 1 | 484 | 0.0 | 810 |
| Msa0887010 | MtrunA17_Chr6g0468521 | 75.826 | 484 | 81 | 3 | 1 | 449 | 1 | 483 | 0.0 | 722 |
| Msa0887010 | MtrunA17_Chr6g0468511 | 71.967 | 478 | 98 | 3 | 1 | 443 | 1 | 477 | 0.0 | 652 |
| Msa0887010 | MtrunA17_Chr1g0202761 | 45.214 | 491 | 224 | 4 | 2 | 447 | 4 | 494 | 3.61e-146 | 426 |
| Msa0887010 | MtrunA17_Chr7g0248051 | 44.615 | 455 | 217 | 2 | 14 | 433 | 53 | 507 | 6.88e-122 | 365 |
| Msa0887010 | MtrunA17_Chr5g0412541 | 36.439 | 483 | 270 | 5 | 1 | 446 | 6 | 488 | 1.55e-102 | 314 |
| Msa0887010 | MtrunA17_Chr5g0412771 | 38.288 | 444 | 238 | 3 | 32 | 439 | 57 | 500 | 4.20e-102 | 314 |
| Msa0887010 | MtrunA17_Chr8g0368001 | 34.560 | 489 | 271 | 6 | 3 | 444 | 13 | 499 | 7.91e-101 | 310 |
| Msa0887010 | MtrunA17_Chr3g0132531 | 37.810 | 484 | 258 | 5 | 2 | 448 | 23 | 500 | 4.86e-99 | 305 |
| Msa0887010 | MtrunA17_Chr7g0254521 | 36.748 | 449 | 248 | 3 | 29 | 441 | 29 | 477 | 1.21e-98 | 304 |
| Msa0887010 | MtrunA17_Chr7g0254511 | 34.440 | 482 | 278 | 5 | 1 | 447 | 1 | 479 | 2.17e-93 | 290 |
| Msa0887010 | MtrunA17_Chr1g0154441 | 38.817 | 389 | 202 | 4 | 90 | 442 | 1 | 389 | 4.43e-92 | 284 |
| Msa0887010 | MtrunA17_Chr4g0024501 | 34.542 | 469 | 268 | 5 | 12 | 443 | 47 | 513 | 9.58e-89 | 279 |
| Msa0887010 | MtrunA17_Chr2g0322671 | 35.099 | 453 | 257 | 4 | 30 | 445 | 51 | 503 | 1.67e-87 | 276 |
| Msa0887010 | MtrunA17_Chr7g0254531 | 36.869 | 396 | 214 | 3 | 90 | 449 | 1 | 396 | 1.90e-87 | 272 |
| Msa0887010 | MtrunA17_Chr2g0288281 | 36.761 | 389 | 209 | 3 | 90 | 441 | 1 | 389 | 1.99e-83 | 261 |
| Msa0887010 | MtrunA17_Chr5g0412571 | 36.816 | 402 | 217 | 5 | 79 | 443 | 29 | 430 | 9.35e-80 | 253 |
| Msa0887010 | MtrunA17_Chr6g0460541 | 37.121 | 396 | 212 | 3 | 89 | 447 | 4 | 399 | 2.57e-78 | 249 |
| Msa0887010 | MtrunA17_Chr3g0132541 | 34.250 | 400 | 242 | 3 | 32 | 430 | 42 | 421 | 1.83e-72 | 234 |
| Msa0887010 | MtrunA17_Chr5g0442331 | 33.411 | 428 | 248 | 4 | 59 | 449 | 74 | 501 | 4.91e-72 | 235 |
| Msa0887010 | MtrunA17_Chr6g0483361 | 32.374 | 417 | 243 | 5 | 59 | 436 | 53 | 469 | 1.33e-62 | 210 |
| Msa0887010 | MtrunA17_Chr1g0208791 | 30.108 | 465 | 286 | 7 | 1 | 428 | 15 | 477 | 1.44e-60 | 205 |
| Msa0887010 | MtrunA17_Chr6g0483381 | 29.560 | 477 | 287 | 10 | 1 | 436 | 3 | 471 | 4.53e-59 | 201 |
| Msa0887010 | MtrunA17_Chr6g0477961 | 30.935 | 417 | 249 | 5 | 59 | 436 | 55 | 471 | 1.23e-57 | 197 |
| Msa0887010 | MtrunA17_Chr2g0317131 | 31.277 | 470 | 275 | 6 | 2 | 427 | 11 | 476 | 9.68e-57 | 195 |
| Msa0887010 | MtrunA17_Chr7g0251331 | 29.095 | 464 | 286 | 6 | 24 | 448 | 19 | 478 | 9.38e-56 | 192 |
| Msa0887010 | MtrunA17_Chr8g0392601 | 27.594 | 453 | 283 | 5 | 22 | 437 | 11 | 455 | 2.92e-55 | 191 |
| Msa0887010 | MtrunA17_Chr6g0483351 | 32.031 | 384 | 214 | 5 | 90 | 430 | 1 | 380 | 1.02e-53 | 185 |
| Msa0887010 | MtrunA17_Chr1g0208821 | 30.480 | 479 | 285 | 10 | 1 | 437 | 8 | 480 | 4.76e-53 | 185 |
| Msa0887010 | MtrunA17_Chr7g0254501 | 32.890 | 301 | 167 | 2 | 175 | 440 | 2 | 302 | 6.12e-53 | 180 |
| Msa0887010 | MtrunA17_Chr6g0483331 | 29.476 | 458 | 265 | 9 | 23 | 436 | 12 | 455 | 1.59e-52 | 183 |
| Msa0887010 | MtrunA17_Chr1g0208881 | 29.530 | 447 | 276 | 4 | 28 | 436 | 22 | 467 | 3.57e-52 | 182 |
| Msa0887010 | MtrunA17_Chr2g0317151 | 31.222 | 442 | 259 | 5 | 30 | 427 | 26 | 466 | 9.92e-52 | 181 |
| Msa0887010 | MtrunA17_Chr6g0483341 | 28.540 | 452 | 277 | 7 | 23 | 436 | 41 | 484 | 1.35e-50 | 178 |
| Msa0887010 | MtrunA17_Chr6g0483161 | 32.687 | 361 | 223 | 4 | 89 | 430 | 2 | 361 | 3.23e-50 | 174 |
| Msa0887010 | MtrunA17_Chr6g0449061 | 28.953 | 487 | 291 | 12 | 3 | 449 | 14 | 485 | 9.38e-50 | 176 |
| Msa0887010 | MtrunA17_Chr2g0317171 | 29.087 | 471 | 289 | 5 | 1 | 427 | 1 | 470 | 1.90e-49 | 175 |
| Msa0887010 | MtrunA17_Chr1g0208891 | 29.399 | 466 | 288 | 5 | 12 | 436 | 1 | 466 | 2.05e-49 | 175 |
| Msa0887010 | MtrunA17_Chr6g0460531 | 37.743 | 257 | 156 | 2 | 14 | 266 | 4 | 260 | 3.68e-48 | 166 |
| Msa0887010 | MtrunA17_Chr2g0317221 | 31.830 | 377 | 218 | 4 | 89 | 427 | 9 | 384 | 1.05e-47 | 169 |
| Msa0887010 | MtrunA17_Chr2g0317161 | 29.864 | 442 | 265 | 5 | 30 | 427 | 24 | 464 | 1.17e-47 | 171 |
| Msa0887010 | MtrunA17_Chr5g0397991 | 28.178 | 472 | 288 | 8 | 1 | 431 | 41 | 502 | 1.94e-47 | 171 |
| Msa0887010 | MtrunA17_Chr7g0251321 | 31.978 | 369 | 225 | 8 | 90 | 436 | 1 | 365 | 1.13e-45 | 162 |
| Msa0887010 | MtrunA17_Chr5g0440661 | 31.627 | 332 | 197 | 6 | 90 | 419 | 1 | 304 | 1.64e-42 | 152 |
| Msa0887010 | MtrunA17_Chr1g0203791 | 25.918 | 463 | 302 | 5 | 4 | 428 | 39 | 498 | 3.96e-39 | 148 |
| Msa0887010 | MtrunA17_Chr6g0473701 | 26.695 | 472 | 299 | 7 | 18 | 447 | 111 | 577 | 6.86e-37 | 142 |
| Msa0887010 | MtrunA17_Chr8g0364761 | 31.227 | 269 | 181 | 3 | 25 | 290 | 48 | 315 | 1.27e-35 | 134 |
| Msa0887010 | MtrunA17_Chr5g0428251 | 24.738 | 477 | 316 | 7 | 11 | 448 | 34 | 506 | 1.99e-35 | 138 |
| Msa0887010 | MtrunA17_Chr3g0140931 | 25.618 | 445 | 291 | 5 | 32 | 437 | 51 | 494 | 4.75e-35 | 137 |
| Msa0887010 | MtrunA17_Chr6g0467321 | 24.045 | 445 | 290 | 6 | 31 | 428 | 42 | 485 | 4.99e-35 | 136 |
| Msa0887010 | MtrunA17_Chr8g0364751 | 46.565 | 131 | 70 | 0 | 306 | 436 | 45 | 175 | 1.77e-28 | 110 |
| Msa0887010 | MtrunA17_Chr8g0389801 | 23.744 | 438 | 295 | 5 | 31 | 431 | 23 | 458 | 1.23e-27 | 114 |
| Msa0887010 | MtrunA17_Chr4g0013031 | 23.203 | 487 | 326 | 9 | 3 | 449 | 42 | 520 | 1.04e-26 | 112 |
| Msa0887010 | MtrunA17_Chr6g0460521 | 31.944 | 216 | 112 | 3 | 265 | 445 | 1 | 216 | 7.20e-25 | 102 |
| Msa0887010 | MtrunA17_Chr6g0483241 | 38.889 | 180 | 108 | 1 | 89 | 266 | 2 | 181 | 5.95e-23 | 95.5 |
| Msa0887010 | MtrunA17_Chr5g0442311 | 33.520 | 179 | 117 | 1 | 90 | 266 | 1 | 179 | 1.42e-21 | 91.7 |
| Msa0887010 | MtrunA17_Chr2g0295631 | 21.031 | 485 | 311 | 7 | 1 | 428 | 1 | 470 | 1.22e-19 | 91.3 |
| Msa0887010 | MtrunA17_Chr7g0254491 | 34.188 | 117 | 76 | 1 | 1 | 117 | 1 | 116 | 5.32e-15 | 71.2 |
| Msa0887010 | MtrunA17_Chr6g0483221 | 30.392 | 102 | 71 | 0 | 328 | 429 | 54 | 155 | 4.99e-14 | 70.1 |
| Msa0887010 | MtrunA17_Chr6g0483261 | 30.275 | 109 | 76 | 0 | 328 | 436 | 54 | 162 | 4.58e-13 | 67.4 |
| Msa0887010 | MtrunA17_Chr6g0483264 | 25.980 | 204 | 116 | 5 | 268 | 436 | 1 | 204 | 5.30e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0887010 | AT4G00350.1 | 45.610 | 467 | 219 | 2 | 11 | 442 | 67 | 533 | 5.01e-147 | 430 |
| Msa0887010 | AT4G25640.1 | 47.412 | 483 | 218 | 4 | 3 | 449 | 5 | 487 | 7.93e-142 | 415 |
| Msa0887010 | AT4G25640.2 | 47.412 | 483 | 218 | 4 | 3 | 449 | 5 | 487 | 1.56e-141 | 415 |
| Msa0887010 | AT4G25640.3 | 47.564 | 431 | 191 | 3 | 3 | 398 | 5 | 435 | 1.77e-126 | 375 |
| Msa0887010 | AT1G47530.1 | 39.286 | 448 | 236 | 3 | 31 | 442 | 34 | 481 | 1.98e-114 | 345 |
| Msa0887010 | AT1G23300.1 | 36.786 | 473 | 263 | 3 | 13 | 449 | 25 | 497 | 1.65e-104 | 320 |
| Msa0887010 | AT1G47530.2 | 41.388 | 389 | 192 | 3 | 90 | 442 | 1 | 389 | 1.70e-101 | 308 |
| Msa0887010 | AT1G12950.1 | 35.032 | 471 | 270 | 3 | 15 | 449 | 50 | 520 | 4.79e-101 | 311 |
| Msa0887010 | AT5G38030.1 | 35.477 | 482 | 263 | 7 | 13 | 446 | 17 | 498 | 2.21e-100 | 309 |
| Msa0887010 | AT3G26590.1 | 36.017 | 472 | 257 | 5 | 13 | 439 | 17 | 488 | 3.27e-98 | 303 |
| Msa0887010 | AT1G61890.1 | 33.129 | 489 | 279 | 7 | 1 | 443 | 9 | 495 | 4.26e-94 | 293 |
| Msa0887010 | AT1G11670.1 | 34.298 | 449 | 258 | 4 | 32 | 443 | 50 | 498 | 3.98e-93 | 290 |
| Msa0887010 | AT5G44050.1 | 34.534 | 472 | 272 | 6 | 12 | 446 | 20 | 491 | 5.48e-93 | 290 |
| Msa0887010 | AT5G65380.1 | 36.192 | 478 | 262 | 6 | 2 | 442 | 13 | 484 | 1.01e-90 | 284 |
| Msa0887010 | AT1G61890.2 | 33.474 | 475 | 268 | 7 | 1 | 429 | 9 | 481 | 2.86e-90 | 283 |
| Msa0887010 | AT4G21910.3 | 34.406 | 497 | 273 | 9 | 1 | 446 | 13 | 507 | 4.15e-90 | 283 |
| Msa0887010 | AT4G21910.1 | 34.406 | 497 | 273 | 9 | 1 | 446 | 13 | 507 | 4.15e-90 | 283 |
| Msa0887010 | AT4G21910.2 | 35.778 | 450 | 249 | 6 | 36 | 446 | 61 | 509 | 3.05e-89 | 281 |
| Msa0887010 | AT4G21910.4 | 35.778 | 450 | 249 | 6 | 36 | 446 | 61 | 509 | 3.05e-89 | 281 |
| Msa0887010 | AT1G33080.1 | 36.481 | 466 | 253 | 5 | 25 | 447 | 29 | 494 | 2.88e-87 | 275 |
| Msa0887010 | AT3G21690.1 | 33.846 | 455 | 262 | 4 | 32 | 449 | 52 | 504 | 4.15e-86 | 273 |
| Msa0887010 | AT4G21903.1 | 36.343 | 432 | 236 | 5 | 53 | 446 | 74 | 504 | 1.15e-85 | 271 |
| Msa0887010 | AT3G26590.2 | 37.565 | 386 | 205 | 3 | 90 | 439 | 1 | 386 | 3.00e-85 | 267 |
| Msa0887010 | AT1G33080.2 | 36.842 | 456 | 246 | 5 | 13 | 432 | 23 | 472 | 9.71e-85 | 268 |
| Msa0887010 | AT1G33110.1 | 35.965 | 456 | 256 | 5 | 20 | 439 | 24 | 479 | 1.62e-84 | 268 |
| Msa0887010 | AT1G33100.1 | 34.316 | 475 | 270 | 4 | 1 | 439 | 8 | 476 | 2.20e-84 | 268 |
| Msa0887010 | AT3G03620.2 | 33.471 | 484 | 271 | 7 | 7 | 449 | 20 | 493 | 4.05e-83 | 265 |
| Msa0887010 | AT3G03620.1 | 33.471 | 484 | 271 | 7 | 7 | 449 | 20 | 493 | 4.05e-83 | 265 |
| Msa0887010 | AT4G21903.2 | 36.473 | 414 | 225 | 4 | 53 | 429 | 74 | 486 | 1.27e-80 | 258 |
| Msa0887010 | AT1G33090.1 | 33.045 | 463 | 268 | 4 | 13 | 439 | 23 | 479 | 4.00e-79 | 254 |
| Msa0887010 | AT1G61890.3 | 33.258 | 445 | 249 | 7 | 1 | 399 | 9 | 451 | 1.17e-78 | 252 |
| Msa0887010 | AT3G59030.1 | 34.670 | 424 | 240 | 5 | 59 | 445 | 78 | 501 | 1.62e-78 | 253 |
| Msa0887010 | AT4G21903.3 | 36.456 | 395 | 213 | 4 | 90 | 446 | 1 | 395 | 1.86e-78 | 249 |
| Msa0887010 | AT5G10420.1 | 35.730 | 459 | 258 | 4 | 25 | 446 | 31 | 489 | 2.33e-76 | 246 |
| Msa0887010 | AT5G17700.2 | 33.056 | 481 | 275 | 5 | 1 | 442 | 8 | 480 | 5.69e-76 | 246 |
| Msa0887010 | AT5G17700.1 | 33.056 | 481 | 275 | 5 | 1 | 442 | 8 | 480 | 5.69e-76 | 246 |
| Msa0887010 | AT2G04070.1 | 30.544 | 478 | 281 | 7 | 12 | 443 | 1 | 473 | 3.75e-62 | 209 |
| Msa0887010 | AT2G04080.1 | 28.632 | 475 | 294 | 7 | 12 | 443 | 1 | 473 | 1.06e-59 | 202 |
| Msa0887010 | AT2G04040.1 | 29.053 | 475 | 292 | 6 | 12 | 443 | 1 | 473 | 2.16e-58 | 199 |
| Msa0887010 | AT2G04080.2 | 28.355 | 462 | 288 | 6 | 12 | 430 | 1 | 462 | 2.35e-57 | 196 |
| Msa0887010 | AT2G34360.1 | 31.220 | 410 | 251 | 4 | 59 | 437 | 54 | 463 | 6.21e-57 | 195 |
| Msa0887010 | AT1G33110.2 | 33.684 | 380 | 216 | 5 | 20 | 363 | 24 | 403 | 1.15e-56 | 192 |
| Msa0887010 | AT1G73700.1 | 30.864 | 486 | 287 | 8 | 1 | 448 | 1 | 475 | 4.27e-56 | 193 |
| Msa0887010 | AT2G04050.1 | 30.498 | 482 | 290 | 8 | 1 | 444 | 1 | 475 | 4.60e-56 | 193 |
| Msa0887010 | AT1G66760.2 | 28.195 | 493 | 292 | 9 | 1 | 446 | 5 | 482 | 7.37e-56 | 192 |
| Msa0887010 | AT1G66760.1 | 28.931 | 477 | 280 | 8 | 1 | 433 | 5 | 466 | 1.40e-54 | 189 |
| Msa0887010 | AT1G15150.1 | 28.785 | 469 | 287 | 9 | 20 | 447 | 21 | 483 | 2.17e-54 | 189 |
| Msa0887010 | AT5G52450.1 | 31.306 | 444 | 267 | 5 | 35 | 441 | 30 | 472 | 2.20e-54 | 189 |
| Msa0887010 | AT1G71140.1 | 29.536 | 474 | 277 | 7 | 11 | 436 | 3 | 467 | 2.34e-54 | 189 |
| Msa0887010 | AT2G34360.2 | 31.234 | 381 | 247 | 3 | 59 | 437 | 54 | 421 | 2.21e-53 | 185 |
| Msa0887010 | AT1G15170.1 | 30.263 | 456 | 279 | 6 | 20 | 438 | 24 | 477 | 3.71e-52 | 182 |
| Msa0887010 | AT1G15160.1 | 27.564 | 468 | 294 | 7 | 20 | 447 | 21 | 483 | 1.19e-50 | 179 |
| Msa0887010 | AT2G04090.1 | 28.452 | 478 | 293 | 7 | 1 | 436 | 1 | 471 | 1.20e-50 | 179 |
| Msa0887010 | AT2G04100.1 | 27.801 | 482 | 303 | 6 | 1 | 442 | 1 | 477 | 5.15e-50 | 177 |
| Msa0887010 | AT1G66780.1 | 27.273 | 473 | 300 | 8 | 5 | 436 | 7 | 476 | 4.47e-49 | 174 |
| Msa0887010 | AT2G04100.2 | 28.298 | 470 | 292 | 6 | 1 | 430 | 1 | 465 | 1.16e-48 | 173 |
| Msa0887010 | AT3G23560.1 | 27.623 | 467 | 295 | 6 | 2 | 427 | 7 | 471 | 4.28e-48 | 172 |
| Msa0887010 | AT3G23550.1 | 27.778 | 432 | 271 | 4 | 40 | 432 | 39 | 468 | 5.33e-47 | 169 |
| Msa0887010 | AT1G64820.1 | 27.311 | 476 | 300 | 9 | 1 | 436 | 1 | 470 | 7.20e-47 | 169 |
| Msa0887010 | AT5G17700.3 | 30.326 | 399 | 231 | 5 | 1 | 360 | 8 | 398 | 7.86e-47 | 167 |
| Msa0887010 | AT1G15180.1 | 30.110 | 455 | 278 | 6 | 23 | 438 | 25 | 478 | 1.17e-46 | 168 |
| Msa0887010 | AT3G59030.2 | 30.088 | 339 | 200 | 5 | 59 | 360 | 78 | 416 | 3.48e-44 | 160 |
| Msa0887010 | AT1G15170.2 | 30.769 | 338 | 197 | 5 | 138 | 438 | 21 | 358 | 7.14e-42 | 152 |
| Msa0887010 | AT1G15150.2 | 28.779 | 344 | 208 | 5 | 141 | 447 | 24 | 367 | 1.07e-40 | 149 |
| Msa0887010 | AT1G66760.3 | 29.290 | 338 | 202 | 4 | 133 | 433 | 1 | 338 | 2.40e-36 | 137 |
| Msa0887010 | AT4G29140.1 | 24.070 | 457 | 305 | 6 | 31 | 449 | 55 | 507 | 8.83e-36 | 139 |
| Msa0887010 | AT5G19700.1 | 24.894 | 470 | 310 | 6 | 1 | 428 | 1 | 469 | 3.16e-35 | 137 |
| Msa0887010 | AT2G38510.1 | 23.144 | 458 | 308 | 7 | 31 | 447 | 5 | 459 | 8.96e-33 | 130 |
| Msa0887010 | AT3G23560.2 | 29.293 | 297 | 202 | 4 | 2 | 292 | 7 | 301 | 5.59e-29 | 118 |
| Msa0887010 | AT1G66760.4 | 29.592 | 294 | 183 | 5 | 1 | 285 | 5 | 283 | 7.78e-29 | 117 |
| Msa0887010 | AT1G58340.1 | 23.516 | 438 | 298 | 4 | 31 | 431 | 57 | 494 | 1.80e-28 | 118 |
| Msa0887010 | AT1G71870.1 | 21.639 | 476 | 306 | 9 | 13 | 428 | 7 | 475 | 4.69e-26 | 110 |
| Msa0887010 | AT5G52050.1 | 22.489 | 458 | 308 | 5 | 19 | 431 | 22 | 477 | 6.13e-26 | 110 |
| Msa0887010 | AT4G23030.1 | 25.234 | 428 | 279 | 7 | 59 | 447 | 59 | 484 | 1.29e-24 | 106 |
| Msa0887010 | AT4G22790.1 | 24.459 | 462 | 276 | 13 | 38 | 443 | 32 | 476 | 1.23e-22 | 100 |
| Msa0887010 | AT2G04066.1 | 29.787 | 141 | 97 | 1 | 303 | 443 | 30 | 168 | 3.84e-22 | 93.6 |
| Msa0887010 | AT5G49130.1 | 21.882 | 457 | 290 | 11 | 31 | 428 | 25 | 473 | 7.86e-21 | 95.5 |
| Msa0887010 | AT1G15180.2 | 26.642 | 274 | 162 | 5 | 125 | 360 | 8 | 280 | 2.09e-17 | 84.3 |
Find 126 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTTGAAATTCTCAGTTTC+TGG | 0.147984 | 6_1:-47766362 | Msa0887010:exon |
| GATTGTCTTGGATGGCATTT+AGG | 0.156838 | 6_1:-47769016 | Msa0887010:CDS |
| CGGCAATATTCTTCAGATTT+TGG | 0.172137 | 6_1:-47766715 | Msa0887010:CDS |
| TTCATTAGTTATAGAGAAAA+TGG | 0.172587 | 6_1:-47766190 | Msa0887010:three_prime_UTR |
| TATGGTTGGTTACATAAATT+TGG | 0.175731 | 6_1:-47767540 | Msa0887010:CDS |
| CTTGGTTTCAACCAGCATTT+AGG | 0.184697 | 6_1:-47767479 | Msa0887010:CDS |
| GGATGGCATTTAGGGAATTA+TGG | 0.195593 | 6_1:-47769007 | Msa0887010:CDS |
| TACTATCTATTTCTCTATAT+TGG | 0.221289 | 6_1:-47770572 | Msa0887010:intron |
| GAATTTCATCTGAAACTTAT+AGG | 0.233106 | 6_1:-47766267 | Msa0887010:three_prime_UTR |
| CATCTGAAACTTATAGGAAT+TGG | 0.240227 | 6_1:-47766261 | Msa0887010:three_prime_UTR |
| ACTCTAATCTTAAAACTTCT+TGG | 0.251742 | 6_1:-47769338 | Msa0887010:CDS |
| CGGCTAATCGCATGAGAATT+TGG | 0.262057 | 6_1:-47766411 | Msa0887010:CDS |
| ATTTATATAGGTGTGGTAAT+TGG | 0.266990 | 6_1:-47767578 | Msa0887010:intron |
| TATAAGAAAGTGAGTCTTAT+TGG | 0.270077 | 6_1:-47770865 | Msa0887010:five_prime_UTR |
| ATCAAACATAATTACCTCTT+TGG | 0.279611 | 6_1:+47766659 | None:intergenic |
| TACATTGTTGGACTCCCTAT+TGG | 0.286240 | 6_1:-47767509 | Msa0887010:CDS |
| TCCATCTATGCTGGTCATAT+TGG | 0.288387 | 6_1:-47770640 | Msa0887010:CDS |
| AAGTTTCAGATGAAATTCTT+AGG | 0.303228 | 6_1:+47766272 | None:intergenic |
| TGGAACATGATGCTGCTTCT+TGG | 0.303911 | 6_1:-47768534 | Msa0887010:CDS |
| CTTTACCAACAATGATGATA+TGG | 0.306168 | 6_1:-47767809 | Msa0887010:CDS |
| GCTTGCATTATCCTTCTTGC+TGG | 0.308510 | 6_1:-47768924 | Msa0887010:CDS |
| CTTCATCAGTGTATTTGATT+GGG | 0.322121 | 6_1:-47769138 | Msa0887010:CDS |
| ATCATTGTTGGTAAAGATAA+AGG | 0.331302 | 6_1:+47767816 | None:intergenic |
| GATGGCATTTAGGGAATTAT+GGG | 0.335429 | 6_1:-47769006 | Msa0887010:CDS |
| TCTTCATCAGTGTATTTGAT+TGG | 0.340775 | 6_1:-47769139 | Msa0887010:CDS |
| TCCAATATGACCAGCATAGA+TGG | 0.341144 | 6_1:+47770639 | None:intergenic |
| AGTATTTCACAAACTATATC+AGG | 0.341370 | 6_1:-47767733 | Msa0887010:intron |
| GCATTACAATGGGGTGCAAT+TGG | 0.341543 | 6_1:-47765954 | Msa0887010:three_prime_UTR |
| ATTGTCTTGGATGGCATTTA+GGG | 0.356470 | 6_1:-47769015 | Msa0887010:CDS |
| AGAGTTGCATATAGATGAAT+TGG | 0.356907 | 6_1:+47769356 | None:intergenic |
| ATCTGAAACTTATAGGAATT+GGG | 0.360635 | 6_1:-47766260 | Msa0887010:three_prime_UTR |
| ACACTATGTGGTCAAGCTTA+TGG | 0.362873 | 6_1:-47769458 | Msa0887010:CDS |
| GAATTTACTAAGCTAAGTTT+TGG | 0.370077 | 6_1:-47768984 | Msa0887010:CDS |
| AGTGAATTAGCATACCTTCT+TGG | 0.371972 | 6_1:-47767775 | Msa0887010:CDS |
| AAAGTTGAATCTCACTCATA+TGG | 0.374748 | 6_1:-47770830 | Msa0887010:exon |
| TTGGTTTCAACCAGCATTTA+GGG | 0.380303 | 6_1:-47767478 | Msa0887010:CDS |
| TTGGCATGCTATTACATTGT+TGG | 0.389393 | 6_1:-47767521 | Msa0887010:CDS |
| AAACCAAGGAAAATTCCAAT+AGG | 0.410570 | 6_1:+47767494 | None:intergenic |
| GAATTGGGTGATTAGAAGTA+GGG | 0.411142 | 6_1:-47766245 | Msa0887010:three_prime_UTR |
| CATAAAGTAGGCATTACAAT+GGG | 0.417454 | 6_1:-47765964 | Msa0887010:three_prime_UTR |
| TTATGCATCTGAGATCAAAC+TGG | 0.428371 | 6_1:+47765982 | None:intergenic |
| AAAGAGATAGCCGATCTTGC+CGG | 0.440212 | 6_1:-47769308 | Msa0887010:CDS |
| TCATTATTTATAAGACCAAC+TGG | 0.443175 | 6_1:-47766683 | Msa0887010:CDS |
| GTATTTGATTGGGGAATGAT+TGG | 0.446046 | 6_1:-47769128 | Msa0887010:CDS |
| GGAATTGGGTGATTAGAAGT+AGG | 0.453215 | 6_1:-47766246 | Msa0887010:three_prime_UTR |
| GGAATGAGACATTGAAGATA+TGG | 0.454071 | 6_1:-47770723 | Msa0887010:CDS |
| CATTACAATGGGGTGCAATT+GGG | 0.457665 | 6_1:-47765953 | Msa0887010:three_prime_UTR |
| ACGAAATTCTAGCCCGTGCT+TGG | 0.457987 | 6_1:+47766126 | None:intergenic |
| GATAATCCTGTCATTGCTGT+TGG | 0.465528 | 6_1:-47768894 | Msa0887010:intron |
| GCAGGAAAATTTCAAAATGC+TGG | 0.468904 | 6_1:-47769434 | Msa0887010:CDS |
| GTATTTATCTTCAAAGGTCA+TGG | 0.471386 | 6_1:-47769412 | Msa0887010:CDS |
| ATGTCTCAGTCTCTTCTCAT+TGG | 0.479393 | 6_1:-47767883 | Msa0887010:intron |
| TTCTAGCCCGTGCTTGGCAC+GGG | 0.482163 | 6_1:+47766132 | None:intergenic |
| GTGAGTCTTATTGGTATATG+TGG | 0.483504 | 6_1:-47770856 | Msa0887010:five_prime_UTR |
| ATGTACCATATCATCATTGT+TGG | 0.488414 | 6_1:+47767804 | None:intergenic |
| ACCATCGTTAAACTTTATTG+AGG | 0.488532 | 6_1:+47766013 | None:intergenic |
| AACCAAGGAAAATTCCAATA+GGG | 0.490049 | 6_1:+47767495 | None:intergenic |
| ATGCTGGTATTTATCTTCAA+AGG | 0.493117 | 6_1:-47769418 | Msa0887010:CDS |
| TGGATGTGGATGGCAAGTTA+TGG | 0.499825 | 6_1:-47767558 | Msa0887010:CDS |
| ATTCTAGCCCGTGCTTGGCA+CGG | 0.506048 | 6_1:+47766131 | None:intergenic |
| CAACCAGCATTTAGGGGTCA+AGG | 0.506365 | 6_1:-47767471 | Msa0887010:intron |
| TTAGAGTCACATTAGAGCTA+TGG | 0.514239 | 6_1:-47766297 | Msa0887010:three_prime_UTR |
| TCTGAGATCAAACTGGGCTA+TGG | 0.521800 | 6_1:+47765989 | None:intergenic |
| AATTACCTCTTTGGTCCAGT+TGG | 0.521889 | 6_1:+47766668 | None:intergenic |
| AAGGATGGAATGGATTGTCT+TGG | 0.523770 | 6_1:-47769028 | Msa0887010:CDS |
| TTGGAGTAAGTTCCGCAGTA+AGG | 0.525082 | 6_1:-47768515 | Msa0887010:intron |
| TGTTATTATGTACATAGCAA+TGG | 0.525747 | 6_1:-47769195 | Msa0887010:CDS |
| TGTGGTCAAGCTTATGGTGC+AGG | 0.527728 | 6_1:-47769452 | Msa0887010:CDS |
| GCAATGGCAAGTAATATCTC+AGG | 0.528753 | 6_1:-47769101 | Msa0887010:CDS |
| ATACCTTGACCCCTAAATGC+TGG | 0.532248 | 6_1:+47767468 | None:intergenic |
| CATGTAGGGAATTAGTAGAA+TGG | 0.533759 | 6_1:+47769277 | None:intergenic |
| ATGATTGCAGGTAGAGCAAA+CGG | 0.534109 | 6_1:-47766431 | Msa0887010:intron |
| TTCATCAGTGTATTTGATTG+GGG | 0.536727 | 6_1:-47769137 | Msa0887010:CDS |
| TCTTCAAATTCCATCTATGC+TGG | 0.537679 | 6_1:-47770649 | Msa0887010:CDS |
| TAACCATTGTTATACCAAGA+AGG | 0.539016 | 6_1:+47767761 | None:intergenic |
| GCCATTGGTTGGTGCAAAGA+AGG | 0.541599 | 6_1:-47769047 | Msa0887010:CDS |
| CTTCACGAGAGGCAAATTGA+CGG | 0.542556 | 6_1:+47769244 | None:intergenic |
| CACTCATATGGAAACACCAT+TGG | 0.544478 | 6_1:-47770818 | Msa0887010:exon |
| ATAGGTGTGGTAATTGGATG+TGG | 0.550106 | 6_1:-47767572 | Msa0887010:intron |
| GTGCACATGCATAGTCACTT+TGG | 0.550525 | 6_1:-47766330 | Msa0887010:three_prime_UTR |
| TTGGCTTAGGGTCTATGGGG+AGG | 0.550606 | 6_1:-47766747 | Msa0887010:intron |
| TAGTGACCCGTGCCAAGCAC+GGG | 0.552322 | 6_1:-47766138 | Msa0887010:three_prime_UTR |
| GGGAATGATTGGTTTAGCAA+TGG | 0.557339 | 6_1:-47769117 | Msa0887010:CDS |
| TGGTGCAAAGAAGGATGGAA+TGG | 0.560126 | 6_1:-47769038 | Msa0887010:CDS |
| TAATGAAGAATTAAGACTGA+GGG | 0.560531 | 6_1:+47766206 | None:intergenic |
| TGATCTCAGATGCATAAAGT+AGG | 0.565018 | 6_1:-47765976 | Msa0887010:three_prime_UTR |
| TCCTTCTTTGCACCAACCAA+TGG | 0.566269 | 6_1:+47769046 | None:intergenic |
| AAGGAACCAACAGCAATGAC+AGG | 0.568244 | 6_1:+47768888 | None:intergenic |
| AAAAGTAAAGACAAAGCCAC+TGG | 0.570960 | 6_1:+47770688 | None:intergenic |
| CTAAATGCTGGTTGAAACCA+AGG | 0.575956 | 6_1:+47767480 | None:intergenic |
| TTGGTTGGTGCAAAGAAGGA+TGG | 0.580974 | 6_1:-47769043 | Msa0887010:CDS |
| TGTGGATGGCAAGTTATGGT+TGG | 0.586186 | 6_1:-47767554 | Msa0887010:CDS |
| GACGGCGAAGGAAAACATGT+AGG | 0.589287 | 6_1:+47769262 | None:intergenic |
| ACGGCGAAGGAAAACATGTA+GGG | 0.600604 | 6_1:+47769263 | None:intergenic |
| ATAGTGACCCGTGCCAAGCA+CGG | 0.602381 | 6_1:-47766139 | Msa0887010:three_prime_UTR |
| TATCAAGATGACCAGCAAGA+AGG | 0.603608 | 6_1:+47768913 | None:intergenic |
| CATATAGATGAATTGGCAAG+AGG | 0.604027 | 6_1:+47769363 | None:intergenic |
| ATACCTTCTTGGTATAACAA+TGG | 0.609585 | 6_1:-47767764 | Msa0887010:CDS |
| TGGTAATATATGCCATTGGT+TGG | 0.611749 | 6_1:-47769058 | Msa0887010:CDS |
| CTTTATTGAGGAGTCAACAC+TGG | 0.622401 | 6_1:+47766025 | None:intergenic |
| TAATGATCTGTTTAGAACAA+TGG | 0.623142 | 6_1:-47768953 | Msa0887010:CDS |
| GCGTTGGTAATATATGCCAT+TGG | 0.623593 | 6_1:-47769062 | Msa0887010:CDS |
| ATGGAATGGATTGTCTTGGA+TGG | 0.624219 | 6_1:-47769024 | Msa0887010:CDS |
| GCATAAAGTAGGCATTACAA+TGG | 0.624646 | 6_1:-47765965 | Msa0887010:three_prime_UTR |
| TGGTTTCAACCAGCATTTAG+GGG | 0.633107 | 6_1:-47767477 | Msa0887010:CDS |
| AATGCACTAGCAACACTATG+TGG | 0.633313 | 6_1:-47769470 | Msa0887010:CDS |
| GTGTGGTAATTGGATGTGGA+TGG | 0.640076 | 6_1:-47767568 | Msa0887010:CDS |
| TAGTTATAGAGAAAATGGAA+AGG | 0.641926 | 6_1:-47766185 | Msa0887010:three_prime_UTR |
| GAGAGGCAAATTGACGGCGA+AGG | 0.648088 | 6_1:+47769250 | None:intergenic |
| CTAATGAAGAATTAAGACTG+AGG | 0.648310 | 6_1:+47766205 | None:intergenic |
| TATGCATCTGAGATCAAACT+GGG | 0.655603 | 6_1:+47765983 | None:intergenic |
| TGGCAAGAGGAATATACAAG+TGG | 0.656634 | 6_1:+47769376 | None:intergenic |
| ATGAAGAATTAAGACTGAGG+GGG | 0.657370 | 6_1:+47766208 | None:intergenic |
| TCCTCAATAAAGTTTAACGA+TGG | 0.659942 | 6_1:-47766014 | Msa0887010:three_prime_UTR |
| GCTTGAAGAAACTTCACGAG+AGG | 0.663335 | 6_1:+47769233 | None:intergenic |
| CTATGGGGAGGAACAATGTG+CGG | 0.665533 | 6_1:-47766735 | Msa0887010:CDS |
| AATTGGGTGATTAGAAGTAG+GGG | 0.666674 | 6_1:-47766244 | Msa0887010:three_prime_UTR |
| TGGCAAGTAATATCTCAGGA+TGG | 0.670260 | 6_1:-47769097 | Msa0887010:CDS |
| TAAGACCAACTGGACCAAAG+AGG | 0.670533 | 6_1:-47766673 | Msa0887010:intron |
| AATGAAGAATTAAGACTGAG+GGG | 0.682653 | 6_1:+47766207 | None:intergenic |
| CAACAAACAAAACCACGTGG+TGG | 0.682887 | 6_1:+47770916 | None:intergenic |
| TATAGTCACTCACCTTACTG+CGG | 0.692620 | 6_1:+47768503 | None:intergenic |
| ATGGAAGATAGCAATTCCAG+TGG | 0.702945 | 6_1:-47770704 | Msa0887010:CDS |
| ATAAAGTAGGCATTACAATG+GGG | 0.757583 | 6_1:-47765963 | Msa0887010:three_prime_UTR |
| AAGCAACAAACAAAACCACG+TGG | 0.783897 | 6_1:+47770913 | None:intergenic |
| ATAATATAATATCCACCACG+TGG | 0.807372 | 6_1:-47770928 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTTAACAATAAATAATAA+GGG | + | chr6_1:47766717-47766736 | None:intergenic | 10.0% |
| !! | TATGTTAACAATAAATAATA+AGG | + | chr6_1:47766718-47766737 | None:intergenic | 10.0% |
| !!! | TTCTTTTTAATTTTCTTTTT+TGG | + | chr6_1:47768806-47768825 | None:intergenic | 10.0% |
| !! | ATTAAAAAGAAATTAAAACT+AGG | - | chr6_1:47768815-47768834 | Msa0887010:intron | 10.0% |
| !!! | TTACAAATTTACATATTTTT+TGG | - | chr6_1:47770083-47770102 | Msa0887010:intron | 10.0% |
| !! | CAATTACTAATTATTGAATT+TGG | + | chr6_1:47766387-47766406 | None:intergenic | 15.0% |
| !! | AATTCAATAATTAGTAATTG+TGG | - | chr6_1:47766387-47766406 | Msa0887010:CDS | 15.0% |
| !!! | TTTTCAAATATATCTACAAT+TGG | + | chr6_1:47766545-47766564 | None:intergenic | 15.0% |
| !!! | TGAAAAACTTGAATTAATTT+TGG | - | chr6_1:47766559-47766578 | Msa0887010:intron | 15.0% |
| !! | AATTAAAACAACATATCTAA+AGG | + | chr6_1:47766609-47766628 | None:intergenic | 15.0% |
| !!! | ATAATTTGAGACAAAATTTT+AGG | - | chr6_1:47766826-47766845 | Msa0887010:intron | 15.0% |
| !!! | AATTTGTTTAGTGAATATAA+GGG | - | chr6_1:47767121-47767140 | Msa0887010:intron | 15.0% |
| !! | TTACATAAAGTCAAATTTAT+AGG | + | chr6_1:47768418-47768437 | None:intergenic | 15.0% |
| !!! | TATAAATTTGACTTTATGTA+AGG | - | chr6_1:47768417-47768436 | Msa0887010:intron | 15.0% |
| !! | ATATGTAAATTTGTAAGAAA+AGG | + | chr6_1:47770079-47770098 | None:intergenic | 15.0% |
| !!! | TTTCCTTTTTAAAAAAACAA+AGG | - | chr6_1:47770268-47770287 | Msa0887010:intron | 15.0% |
| !!! | TTCCTTTTTAAAAAAACAAA+GGG | - | chr6_1:47770269-47770288 | Msa0887010:intron | 15.0% |
| !!! | TACTATCTATTTCTCTATAT+TGG | - | chr6_1:47766277-47766296 | Msa0887010:three_prime_UTR | 20.0% |
| !!! | TAAGTTCATGTTTGAAATAA+CGG | - | chr6_1:47766441-47766460 | Msa0887010:intron | 20.0% |
| !!! | ATTTATAGTGTTGATTTCAA+TGG | - | chr6_1:47766665-47766684 | Msa0887010:intron | 20.0% |
| !!! | AAAACAATTTAGTCTTTGTT+TGG | - | chr6_1:47766969-47766988 | Msa0887010:intron | 20.0% |
| !! | AAACTAACTTATAGCTTATA+AGG | - | chr6_1:47767002-47767021 | Msa0887010:intron | 20.0% |
| !!! | CAATTTGTTTAGTGAATATA+AGG | - | chr6_1:47767120-47767139 | Msa0887010:intron | 20.0% |
| !! | TTATTCTTACCAAATTGAAA+AGG | + | chr6_1:47767983-47768002 | None:intergenic | 20.0% |
| !!! | TATTTTTAGCCTTAATATTC+AGG | - | chr6_1:47768290-47768309 | Msa0887010:intron | 20.0% |
| !!! | ATTTTTAGCCTTAATATTCA+GGG | - | chr6_1:47768291-47768310 | Msa0887010:intron | 20.0% |
| !! | ACATAATTTAGTGTAATCAT+AGG | - | chr6_1:47768548-47768567 | Msa0887010:intron | 20.0% |
| !! | TGGTTATATGTCTATTTATT+AGG | - | chr6_1:47769454-47769473 | Msa0887010:CDS | 20.0% |
| !! | ATGAGTTCAATATTACAATT+TGG | + | chr6_1:47769683-47769702 | None:intergenic | 20.0% |
| !! | AACTTATCTACTATTAATGT+GGG | - | chr6_1:47769758-47769777 | Msa0887010:intron | 20.0% |
| !! | AATTAGAACATAACATTCTT+AGG | + | chr6_1:47769872-47769891 | None:intergenic | 20.0% |
| !!! | AACTTTTTTTGGTAGATAAA+TGG | + | chr6_1:47769962-47769981 | None:intergenic | 20.0% |
| !!! | TCTAACATAAGAACTTTTTT+TGG | + | chr6_1:47769973-47769992 | None:intergenic | 20.0% |
| !! | AAGGAAATCATAATATAAGT+TGG | + | chr6_1:47770060-47770079 | None:intergenic | 20.0% |
| !!! | ATTTACATATTTTTTGGCTT+AGG | - | chr6_1:47770089-47770108 | Msa0887010:intron | 20.0% |
| !!! | TTTACATATTTTTTGGCTTA+GGG | - | chr6_1:47770090-47770109 | Msa0887010:intron | 20.0% |
| !!! | AACCCTTTGTTTTTTTAAAA+AGG | + | chr6_1:47770274-47770293 | None:intergenic | 20.0% |
| !!! | AGAATTTGTTAACATTTTCA+TGG | - | chr6_1:47770384-47770403 | Msa0887010:intron | 20.0% |
| !! | TTCATTAGTTATAGAGAAAA+TGG | - | chr6_1:47770659-47770678 | Msa0887010:CDS | 20.0% |
| !! | TATAAGAAAGTGAGTCTTAT+TGG | - | chr6_1:47765984-47766003 | Msa0887010:three_prime_UTR | 25.0% |
| !!! | ACATCTTTCAAGTTTTTCAT+AGG | + | chr6_1:47766092-47766111 | None:intergenic | 25.0% |
| !! | AAGATGTGAAATATGTTTTG+TGG | - | chr6_1:47766105-47766124 | Msa0887010:three_prime_UTR | 25.0% |
| !!! | TTACTTTTTCAGAATCTCAT+TGG | - | chr6_1:47766176-47766195 | Msa0887010:three_prime_UTR | 25.0% |
| ! | ATGAATGAGAATGATAAGAA+AGG | + | chr6_1:47766309-47766328 | None:intergenic | 25.0% |
| ! | TAATTGTGGTATGTTTATGT+TGG | - | chr6_1:47766401-47766420 | Msa0887010:CDS | 25.0% |
| !! | AACTTTTGTCAAAATCACAT+TGG | - | chr6_1:47766515-47766534 | Msa0887010:intron | 25.0% |
| !!! | TAAGTTTTAACTAGTTAGGA+CGG | + | chr6_1:47766586-47766605 | None:intergenic | 25.0% |
| !!! | AAGGTAAGTTTTAACTAGTT+AGG | + | chr6_1:47766590-47766609 | None:intergenic | 25.0% |
| ! | TAACTATTACACGATTATCA+AGG | - | chr6_1:47766637-47766656 | Msa0887010:intron | 25.0% |
| !! | TAAGCTATAAGTTAGTTTCT+TGG | + | chr6_1:47767000-47767019 | None:intergenic | 25.0% |
| ! | AAACAAATTGTGTTTACCAT+GGG | + | chr6_1:47767110-47767129 | None:intergenic | 25.0% |
| ! | TAAACAAATTGTGTTTACCA+TGG | + | chr6_1:47767111-47767130 | None:intergenic | 25.0% |
| ! | ACTCTAATCTTAAAACTTCT+TGG | - | chr6_1:47767511-47767530 | Msa0887010:CDS | 25.0% |
| ! | TGTTATTATGTACATAGCAA+TGG | - | chr6_1:47767654-47767673 | Msa0887010:intron | 25.0% |
| !! | GAATTTACTAAGCTAAGTTT+TGG | - | chr6_1:47767865-47767884 | Msa0887010:CDS | 25.0% |
| !! | TAATGATCTGTTTAGAACAA+TGG | - | chr6_1:47767896-47767915 | Msa0887010:intron | 25.0% |
| ! | TTCTCAAATTATTATCGATG+TGG | - | chr6_1:47768119-47768138 | Msa0887010:intron | 25.0% |
| ! | AAATTATGAAGAAAGCAAGA+AGG | + | chr6_1:47768259-47768278 | None:intergenic | 25.0% |
| ! | TTATGTAAGGAATTGAAATC+TGG | - | chr6_1:47768430-47768449 | Msa0887010:intron | 25.0% |
| !! | GTTTAGTTTAATTCAGTCTT+AGG | + | chr6_1:47768773-47768792 | None:intergenic | 25.0% |
| !! | ATCATTGTTGGTAAAGATAA+AGG | + | chr6_1:47769036-47769055 | None:intergenic | 25.0% |
| ! | AGTATTTCACAAACTATATC+AGG | - | chr6_1:47769116-47769135 | Msa0887010:CDS | 25.0% |
| !! | GGTTATAGTTTATTTGCTTT+TGG | - | chr6_1:47769137-47769156 | Msa0887010:CDS | 25.0% |
| !!! | AAGAAGTTCGATTTTGAAAA+CGG | + | chr6_1:47769247-47769266 | None:intergenic | 25.0% |
| ! | AACTTCTTGGACATTTATAT+AGG | - | chr6_1:47769259-47769278 | Msa0887010:CDS | 25.0% |
| ! | ATTTATATAGGTGTGGTAAT+TGG | - | chr6_1:47769271-47769290 | Msa0887010:CDS | 25.0% |
| !! | TATGGTTGGTTACATAAATT+TGG | - | chr6_1:47769309-47769328 | Msa0887010:CDS | 25.0% |
| ! | GACACTCTTTACATTATAAA+TGG | + | chr6_1:47769514-47769533 | None:intergenic | 25.0% |
| ! | GAACTTATCTACTATTAATG+TGG | - | chr6_1:47769757-47769776 | Msa0887010:intron | 25.0% |
| ! | AAATCTCTTTCAGCTTAAAT+AGG | - | chr6_1:47769830-47769849 | Msa0887010:intron | 25.0% |
| ! | GTAGATAAATGGTACAAAAT+AGG | + | chr6_1:47769951-47769970 | None:intergenic | 25.0% |
| ! | TCATTATTTATAAGACCAAC+TGG | - | chr6_1:47770166-47770185 | Msa0887010:intron | 25.0% |
| ! | ATCAAACATAATTACCTCTT+TGG | + | chr6_1:47770193-47770212 | None:intergenic | 25.0% |
| !! | TTCGACTTGTAAAAATATGA+AGG | + | chr6_1:47770339-47770358 | None:intergenic | 25.0% |
| ! | AAGTTTCAGATGAAATTCTT+AGG | + | chr6_1:47770580-47770599 | None:intergenic | 25.0% |
| !! | GAATTTCATCTGAAACTTAT+AGG | - | chr6_1:47770582-47770601 | Msa0887010:CDS | 25.0% |
| !! | ATCTGAAACTTATAGGAATT+GGG | - | chr6_1:47770589-47770608 | Msa0887010:CDS | 25.0% |
| ! | TAATGAAGAATTAAGACTGA+GGG | + | chr6_1:47770646-47770665 | None:intergenic | 25.0% |
| ! | TAGTTATAGAGAAAATGGAA+AGG | - | chr6_1:47770664-47770683 | Msa0887010:CDS | 25.0% |
| AAAGTTGAATCTCACTCATA+TGG | - | chr6_1:47766019-47766038 | Msa0887010:three_prime_UTR | 30.0% | |
| ! | GTAAAGCTTTTATTCACCAA+TGG | + | chr6_1:47766050-47766069 | None:intergenic | 30.0% |
| CAAATATATCTACAATTGGC+TGG | + | chr6_1:47766541-47766560 | None:intergenic | 30.0% | |
| TTGTTTAGTGAATATAAGGG+AGG | - | chr6_1:47767124-47767143 | Msa0887010:intron | 30.0% | |
| !! | GTGTCATTTAAAGAGACTTT+AGG | - | chr6_1:47767175-47767194 | Msa0887010:intron | 30.0% |
| ! | ATTTAAAGAGACTTTAGGAG+AGG | - | chr6_1:47767180-47767199 | Msa0887010:intron | 30.0% |
| ! | ATACCATACTGCAATTTTAC+AGG | + | chr6_1:47767355-47767374 | None:intergenic | 30.0% |
| ATGCTGGTATTTATCTTCAA+AGG | - | chr6_1:47767431-47767450 | Msa0887010:intron | 30.0% | |
| GTATTTATCTTCAAAGGTCA+TGG | - | chr6_1:47767437-47767456 | Msa0887010:intron | 30.0% | |
| AGAGTTGCATATAGATGAAT+TGG | + | chr6_1:47767496-47767515 | None:intergenic | 30.0% | |
| ! | TAGTAGAATGGCATATTTTC+CGG | + | chr6_1:47767563-47767582 | None:intergenic | 30.0% |
| TCTTCATCAGTGTATTTGAT+TGG | - | chr6_1:47767710-47767729 | Msa0887010:intron | 30.0% | |
| CTTCATCAGTGTATTTGATT+GGG | - | chr6_1:47767711-47767730 | Msa0887010:intron | 30.0% | |
| TTCATCAGTGTATTTGATTG+GGG | - | chr6_1:47767712-47767731 | Msa0887010:intron | 30.0% | |
| ! | ATGGATATTTTCTATTGCGT+TGG | - | chr6_1:47767771-47767790 | Msa0887010:CDS | 30.0% |
| CTTTACCAACAATGATGATA+TGG | - | chr6_1:47769040-47769059 | Msa0887010:CDS | 30.0% | |
| ATGTACCATATCATCATTGT+TGG | + | chr6_1:47769048-47769067 | None:intergenic | 30.0% | |
| ATACCTTCTTGGTATAACAA+TGG | - | chr6_1:47769085-47769104 | Msa0887010:CDS | 30.0% | |
| TAACCATTGTTATACCAAGA+AGG | + | chr6_1:47769091-47769110 | None:intergenic | 30.0% | |
| GTTACTCTGGTAAAATAAAG+GGG | + | chr6_1:47769211-47769230 | None:intergenic | 30.0% | |
| CGTTACTCTGGTAAAATAAA+GGG | + | chr6_1:47769212-47769231 | None:intergenic | 30.0% | |
| TCGTTACTCTGGTAAAATAA+AGG | + | chr6_1:47769213-47769232 | None:intergenic | 30.0% | |
| ! | GTTTTCAAAATCGAACTTCT+TGG | - | chr6_1:47769246-47769265 | Msa0887010:CDS | 30.0% |
| AACCAAGGAAAATTCCAATA+GGG | + | chr6_1:47769357-47769376 | None:intergenic | 30.0% | |
| AAACCAAGGAAAATTCCAAT+AGG | + | chr6_1:47769358-47769377 | None:intergenic | 30.0% | |
| ! | CCAACTTCATTGATGATTTA+GGG | + | chr6_1:47769437-47769456 | None:intergenic | 30.0% |
| ! | ACCAACTTCATTGATGATTT+AGG | + | chr6_1:47769438-47769457 | None:intergenic | 30.0% |
| ! | GTGTTATTGATTATGATTGC+AGG | - | chr6_1:47770406-47770425 | Msa0887010:intron | 30.0% |
| ! | TTCAAATCACATCGTTTTGA+AGG | + | chr6_1:47770475-47770494 | None:intergenic | 30.0% |
| ! | GATTTGAAATTCTCAGTTTC+TGG | - | chr6_1:47770487-47770506 | Msa0887010:intron | 30.0% |
| ! | CATCTGAAACTTATAGGAAT+TGG | - | chr6_1:47770588-47770607 | Msa0887010:CDS | 30.0% |
| AATGAAGAATTAAGACTGAG+GGG | + | chr6_1:47770645-47770664 | None:intergenic | 30.0% | |
| CTAATGAAGAATTAAGACTG+AGG | + | chr6_1:47770647-47770666 | None:intergenic | 30.0% | |
| TCCTCAATAAAGTTTAACGA+TGG | - | chr6_1:47770835-47770854 | Msa0887010:five_prime_UTR | 30.0% | |
| ACCATCGTTAAACTTTATTG+AGG | + | chr6_1:47770839-47770858 | None:intergenic | 30.0% | |
| CATAAAGTAGGCATTACAAT+GGG | - | chr6_1:47770885-47770904 | Msa0887010:five_prime_UTR | 30.0% | |
| ATAAAGTAGGCATTACAATG+GGG | - | chr6_1:47770886-47770905 | Msa0887010:five_prime_UTR | 30.0% | |
| !! | GTGAGTCTTATTGGTATATG+TGG | - | chr6_1:47765993-47766012 | Msa0887010:three_prime_UTR | 35.0% |
| GGAATGAGACATTGAAGATA+TGG | - | chr6_1:47766126-47766145 | Msa0887010:three_prime_UTR | 35.0% | |
| AAAAGTAAAGACAAAGCCAC+TGG | + | chr6_1:47766164-47766183 | None:intergenic | 35.0% | |
| TCTTCAAATTCCATCTATGC+TGG | - | chr6_1:47766200-47766219 | Msa0887010:three_prime_UTR | 35.0% | |
| TTGTGGTATGTTTATGTTGG+AGG | - | chr6_1:47766404-47766423 | Msa0887010:CDS | 35.0% | |
| GTATGTTTATGTTGGAGGAA+GGG | - | chr6_1:47766409-47766428 | Msa0887010:CDS | 35.0% | |
| TATTTACTCCGTCTCACAAT+AGG | + | chr6_1:47766862-47766881 | None:intergenic | 35.0% | |
| AGATGACACCTATTGTTAGA+CGG | - | chr6_1:47766881-47766900 | Msa0887010:intron | 35.0% | |
| GTCTAGCTAAAAGACTCATT+TGG | - | chr6_1:47767027-47767046 | Msa0887010:intron | 35.0% | |
| !!! | CGTTGTTTTTAAAAGACCCA+TGG | - | chr6_1:47767091-47767110 | Msa0887010:intron | 35.0% |
| TGTATGAGTTTAGATGCTGA+AGG | - | chr6_1:47767237-47767256 | Msa0887010:intron | 35.0% | |
| !! | ATGCTGAAGGAGTATTAAGA+AGG | - | chr6_1:47767250-47767269 | Msa0887010:intron | 35.0% |
| TCACCTGTAAAATTGCAGTA+TGG | - | chr6_1:47767349-47767368 | Msa0887010:intron | 35.0% | |
| GCAGGAAAATTTCAAAATGC+TGG | - | chr6_1:47767415-47767434 | Msa0887010:intron | 35.0% | |
| CATATAGATGAATTGGCAAG+AGG | + | chr6_1:47767489-47767508 | None:intergenic | 35.0% | |
| CATGTAGGGAATTAGTAGAA+TGG | + | chr6_1:47767575-47767594 | None:intergenic | 35.0% | |
| GTATTTGATTGGGGAATGAT+TGG | - | chr6_1:47767721-47767740 | Msa0887010:intron | 35.0% | |
| TGGTAATATATGCCATTGGT+TGG | - | chr6_1:47767791-47767810 | Msa0887010:CDS | 35.0% | |
| ATTGTCTTGGATGGCATTTA+GGG | - | chr6_1:47767834-47767853 | Msa0887010:CDS | 35.0% | |
| GATGGCATTTAGGGAATTAT+GGG | - | chr6_1:47767843-47767862 | Msa0887010:CDS | 35.0% | |
| !!! | CTGTTGGTTCCTTTTCAATT+TGG | - | chr6_1:47767971-47767990 | Msa0887010:intron | 35.0% |
| TACGAAACACATATACTCCT+CGG | - | chr6_1:47768013-47768032 | Msa0887010:intron | 35.0% | |
| TATGAAGAAAGCAAGAAGGA+AGG | + | chr6_1:47768255-47768274 | None:intergenic | 35.0% | |
| !! | TTAGCCTTAATATTCAGGGT+TGG | - | chr6_1:47768295-47768314 | Msa0887010:intron | 35.0% |
| TGTTCCAACCCTGAATATTA+AGG | + | chr6_1:47768302-47768321 | None:intergenic | 35.0% | |
| ! | TGTAATCATAGGTATCGTGT+CGG | - | chr6_1:47768559-47768578 | Msa0887010:intron | 35.0% |
| ! | AAAGACATTCCACTGATTAG+GGG | + | chr6_1:47768619-47768638 | None:intergenic | 35.0% |
| ! | CAAAGACATTCCACTGATTA+GGG | + | chr6_1:47768620-47768639 | None:intergenic | 35.0% |
| GTTCGTGTCTCTAATACAAT+TGG | - | chr6_1:47768900-47768919 | Msa0887010:CDS | 35.0% | |
| !! | AAAGAGTATTTGGATGCTCT+TGG | + | chr6_1:47768936-47768955 | None:intergenic | 35.0% |
| AGCATCCAAATACTCTTTCT+TGG | - | chr6_1:47768938-47768957 | Msa0887010:CDS | 35.0% | |
| ATCCAAATACTCTTTCTTGG+TGG | - | chr6_1:47768941-47768960 | Msa0887010:CDS | 35.0% | |
| AGTGAATTAGCATACCTTCT+TGG | - | chr6_1:47769074-47769093 | Msa0887010:CDS | 35.0% | |
| ! | AGTGACTATTTTCGTTACTC+TGG | + | chr6_1:47769224-47769243 | None:intergenic | 35.0% |
| CTTGGACATTTATATAGGTG+TGG | - | chr6_1:47769264-47769283 | Msa0887010:CDS | 35.0% | |
| TTGGCATGCTATTACATTGT+TGG | - | chr6_1:47769328-47769347 | Msa0887010:CDS | 35.0% | |
| TTGGTTTCAACCAGCATTTA+GGG | - | chr6_1:47769371-47769390 | Msa0887010:CDS | 35.0% | |
| ! | ACTTCATTGATGATTTAGGG+AGG | + | chr6_1:47769434-47769453 | None:intergenic | 35.0% |
| CCCTAAATCATCAATGAAGT+TGG | - | chr6_1:47769434-47769453 | Msa0887010:CDS | 35.0% | |
| TCTTAACTGTTTCAACGTGA+TGG | - | chr6_1:47769557-47769576 | Msa0887010:intron | 35.0% | |
| GGTACCAAATCCTATCATTT+CGG | + | chr6_1:47769662-47769681 | None:intergenic | 35.0% | |
| ! | TTTCATCTGAAATTCGAGGT+AGG | + | chr6_1:47769804-47769823 | None:intergenic | 35.0% |
| ! | GTCATTTCATCTGAAATTCG+AGG | + | chr6_1:47769808-47769827 | None:intergenic | 35.0% |
| ! | GTCTTTTACCAAACTATGAG+TGG | - | chr6_1:47769922-47769941 | Msa0887010:intron | 35.0% |
| CATTCTACATATACTTTGCC+TGG | - | chr6_1:47770013-47770032 | Msa0887010:intron | 35.0% | |
| !!! | ATTTTTTGGCTTAGGGTCTA+TGG | - | chr6_1:47770097-47770116 | Msa0887010:intron | 35.0% |
| !!! | TTTTTTGGCTTAGGGTCTAT+GGG | - | chr6_1:47770098-47770117 | Msa0887010:intron | 35.0% |
| ! | CGGCAATATTCTTCAGATTT+TGG | - | chr6_1:47770134-47770153 | Msa0887010:intron | 35.0% |
| AAGCATTCACTGCAAAATCT+TGG | + | chr6_1:47770225-47770244 | None:intergenic | 35.0% | |
| TTAGAGTCACATTAGAGCTA+TGG | - | chr6_1:47770552-47770571 | Msa0887010:intron | 35.0% | |
| GAATTGGGTGATTAGAAGTA+GGG | - | chr6_1:47770604-47770623 | Msa0887010:CDS | 35.0% | |
| AATTGGGTGATTAGAAGTAG+GGG | - | chr6_1:47770605-47770624 | Msa0887010:CDS | 35.0% | |
| ATGAAGAATTAAGACTGAGG+GGG | + | chr6_1:47770644-47770663 | None:intergenic | 35.0% | |
| ! | TATGCATCTGAGATCAAACT+GGG | + | chr6_1:47770869-47770888 | None:intergenic | 35.0% |
| ! | TTATGCATCTGAGATCAAAC+TGG | + | chr6_1:47770870-47770889 | None:intergenic | 35.0% |
| TGATCTCAGATGCATAAAGT+AGG | - | chr6_1:47770873-47770892 | Msa0887010:five_prime_UTR | 35.0% | |
| GCATAAAGTAGGCATTACAA+TGG | - | chr6_1:47770884-47770903 | Msa0887010:five_prime_UTR | 35.0% | |
| AAGCAACAAACAAAACCACG+TGG | + | chr6_1:47765939-47765958 | None:intergenic | 40.0% | |
| !!! | ACGTGGTTTTGTTTGTTGCT+TGG | - | chr6_1:47765938-47765957 | Msa0887010:three_prime_UTR | 40.0% |
| !!! | CGTGGTTTTGTTTGTTGCTT+GGG | - | chr6_1:47765939-47765958 | Msa0887010:three_prime_UTR | 40.0% |
| CACTCATATGGAAACACCAT+TGG | - | chr6_1:47766031-47766050 | Msa0887010:three_prime_UTR | 40.0% | |
| ATGGAAGATAGCAATTCCAG+TGG | - | chr6_1:47766145-47766164 | Msa0887010:three_prime_UTR | 40.0% | |
| TCCATCTATGCTGGTCATAT+TGG | - | chr6_1:47766209-47766228 | Msa0887010:three_prime_UTR | 40.0% | |
| TCCAATATGACCAGCATAGA+TGG | + | chr6_1:47766213-47766232 | None:intergenic | 40.0% | |
| GGTATGTTTATGTTGGAGGA+AGG | - | chr6_1:47766408-47766427 | Msa0887010:CDS | 40.0% | |
| AGATGACACCTATTGTGAGA+CGG | - | chr6_1:47766851-47766870 | Msa0887010:intron | 40.0% | |
| TACTCCATCCGTCTAACAAT+AGG | + | chr6_1:47766892-47766911 | None:intergenic | 40.0% | |
| TACAACTAAACGACACCTTG+AGG | + | chr6_1:47767221-47767240 | None:intergenic | 40.0% | |
| !! | CTGAAGGAGTATTAAGAAGG+AGG | - | chr6_1:47767253-47767272 | Msa0887010:intron | 40.0% |
| AATGCACTAGCAACACTATG+TGG | - | chr6_1:47767379-47767398 | Msa0887010:intron | 40.0% | |
| ACACTATGTGGTCAAGCTTA+TGG | - | chr6_1:47767391-47767410 | Msa0887010:intron | 40.0% | |
| TGGCAAGAGGAATATACAAG+TGG | + | chr6_1:47767476-47767495 | None:intergenic | 40.0% | |
| !! | GGGAATGATTGGTTTAGCAA+TGG | - | chr6_1:47767732-47767751 | Msa0887010:intron | 40.0% |
| GCAATGGCAAGTAATATCTC+AGG | - | chr6_1:47767748-47767767 | Msa0887010:CDS | 40.0% | |
| TGGCAAGTAATATCTCAGGA+TGG | - | chr6_1:47767752-47767771 | Msa0887010:CDS | 40.0% | |
| !! | GCGTTGGTAATATATGCCAT+TGG | - | chr6_1:47767787-47767806 | Msa0887010:CDS | 40.0% |
| !! | AAGGATGGAATGGATTGTCT+TGG | - | chr6_1:47767821-47767840 | Msa0887010:CDS | 40.0% |
| !! | ATGGAATGGATTGTCTTGGA+TGG | - | chr6_1:47767825-47767844 | Msa0887010:CDS | 40.0% |
| GATTGTCTTGGATGGCATTT+AGG | - | chr6_1:47767833-47767852 | Msa0887010:CDS | 40.0% | |
| GGATGGCATTTAGGGAATTA+TGG | - | chr6_1:47767842-47767861 | Msa0887010:CDS | 40.0% | |
| TATCAAGATGACCAGCAAGA+AGG | + | chr6_1:47767939-47767958 | None:intergenic | 40.0% | |
| GATAATCCTGTCATTGCTGT+TGG | - | chr6_1:47767955-47767974 | Msa0887010:intron | 40.0% | |
| ACACATATACTCCTCGGATT+AGG | - | chr6_1:47768019-47768038 | Msa0887010:intron | 40.0% | |
| CAAGATAAGTATTCGACACC+AGG | + | chr6_1:47768050-47768069 | None:intergenic | 40.0% | |
| TATAAGTGTCAGTGTCGTGT+CGG | + | chr6_1:47768080-47768099 | None:intergenic | 40.0% | |
| TATAGTCACTCACCTTACTG+CGG | + | chr6_1:47768349-47768368 | None:intergenic | 40.0% | |
| ATGAAGCACGAACATAGACA+CGG | - | chr6_1:47768466-47768485 | Msa0887010:intron | 40.0% | |
| ! | GCAAAGACATTCCACTGATT+AGG | + | chr6_1:47768621-47768640 | None:intergenic | 40.0% |
| TTTGTTCTATACACCAGCAC+AGG | - | chr6_1:47768669-47768688 | Msa0887010:intron | 40.0% | |
| ACTAACATGAAAACCTGTGC+TGG | + | chr6_1:47768685-47768704 | None:intergenic | 40.0% | |
| !! | TGCCACCAAGAAAGAGTATT+TGG | + | chr6_1:47768946-47768965 | None:intergenic | 40.0% |
| ATGTCTCAGTCTCTTCTCAT+TGG | - | chr6_1:47768966-47768985 | Msa0887010:CDS | 40.0% | |
| ATAGGTGTGGTAATTGGATG+TGG | - | chr6_1:47769277-47769296 | Msa0887010:CDS | 40.0% | |
| TACATTGTTGGACTCCCTAT+TGG | - | chr6_1:47769340-47769359 | Msa0887010:CDS | 40.0% | |
| ! | CTCCCTATTGGAATTTTCCT+TGG | - | chr6_1:47769352-47769371 | Msa0887010:CDS | 40.0% |
| ! | CTAAATGCTGGTTGAAACCA+AGG | + | chr6_1:47769372-47769391 | None:intergenic | 40.0% |
| CTTGGTTTCAACCAGCATTT+AGG | - | chr6_1:47769370-47769389 | Msa0887010:CDS | 40.0% | |
| TGGTTTCAACCAGCATTTAG+GGG | - | chr6_1:47769372-47769391 | Msa0887010:CDS | 40.0% | |
| CTCACACCTAGTCGTATTAT+AGG | - | chr6_1:47769607-47769626 | Msa0887010:intron | 40.0% | |
| CTCAAGCCTATAATACGACT+AGG | + | chr6_1:47769616-47769635 | None:intergenic | 40.0% | |
| GGCTTGAGTGATTAATATGC+AGG | - | chr6_1:47769628-47769647 | Msa0887010:intron | 40.0% | |
| GTGATTAATATGCAGGTCGT+TGG | - | chr6_1:47769635-47769654 | Msa0887010:intron | 40.0% | |
| TGGTCCGAAATGATAGGATT+TGG | - | chr6_1:47769655-47769674 | Msa0887010:intron | 40.0% | |
| TTAGTACCATGATGCTTTCC+AGG | + | chr6_1:47770034-47770053 | None:intergenic | 40.0% | |
| !!! | TTTTTGGCTTAGGGTCTATG+GGG | - | chr6_1:47770099-47770118 | Msa0887010:intron | 40.0% |
| AATTACCTCTTTGGTCCAGT+TGG | + | chr6_1:47770184-47770203 | None:intergenic | 40.0% | |
| GGAATTGGGTGATTAGAAGT+AGG | - | chr6_1:47770603-47770622 | Msa0887010:CDS | 40.0% | |
| CTTTATTGAGGAGTCAACAC+TGG | + | chr6_1:47770827-47770846 | None:intergenic | 40.0% | |
| CATTACAATGGGGTGCAATT+GGG | - | chr6_1:47770896-47770915 | Msa0887010:five_prime_UTR | 40.0% | |
| CAACAAACAAAACCACGTGG+TGG | + | chr6_1:47765936-47765955 | None:intergenic | 45.0% | |
| GACACCTATTGTTAGACGGA+TGG | - | chr6_1:47766885-47766904 | Msa0887010:intron | 45.0% | |
| TTAGGAGAGGTCAATGCAAC+TGG | - | chr6_1:47767193-47767212 | Msa0887010:intron | 45.0% | |
| ! | TCAATGCAACTGGTTCCTCA+AGG | - | chr6_1:47767203-47767222 | Msa0887010:intron | 45.0% |
| AAAGAGATAGCCGATCTTGC+CGG | - | chr6_1:47767541-47767560 | Msa0887010:CDS | 45.0% | |
| ! | GGCATATTTTCCGGCAAGAT+CGG | + | chr6_1:47767554-47767573 | None:intergenic | 45.0% |
| ACGGCGAAGGAAAACATGTA+GGG | + | chr6_1:47767589-47767608 | None:intergenic | 45.0% | |
| CTTCACGAGAGGCAAATTGA+CGG | + | chr6_1:47767608-47767627 | None:intergenic | 45.0% | |
| GCTTGAAGAAACTTCACGAG+AGG | + | chr6_1:47767619-47767638 | None:intergenic | 45.0% | |
| TCCTTCTTTGCACCAACCAA+TGG | + | chr6_1:47767806-47767825 | None:intergenic | 45.0% | |
| ! | TTGGTTGGTGCAAAGAAGGA+TGG | - | chr6_1:47767806-47767825 | Msa0887010:CDS | 45.0% |
| TGGTGCAAAGAAGGATGGAA+TGG | - | chr6_1:47767811-47767830 | Msa0887010:CDS | 45.0% | |
| GCTTGCATTATCCTTCTTGC+TGG | - | chr6_1:47767925-47767944 | Msa0887010:intron | 45.0% | |
| AAGGAACCAACAGCAATGAC+AGG | + | chr6_1:47767964-47767983 | None:intergenic | 45.0% | |
| ! | TGGAACATGATGCTGCTTCT+TGG | - | chr6_1:47768315-47768334 | Msa0887010:intron | 45.0% |
| TTGGAGTAAGTTCCGCAGTA+AGG | - | chr6_1:47768334-47768353 | Msa0887010:intron | 45.0% | |
| ACGAACATAGACACGGACAT+CGG | - | chr6_1:47768473-47768492 | Msa0887010:intron | 45.0% | |
| TAGAGACACGAACACTTGCA+AGG | + | chr6_1:47768893-47768912 | None:intergenic | 45.0% | |
| GTGTGGTAATTGGATGTGGA+TGG | - | chr6_1:47769281-47769300 | Msa0887010:CDS | 45.0% | |
| TGGATGTGGATGGCAAGTTA+TGG | - | chr6_1:47769291-47769310 | Msa0887010:CDS | 45.0% | |
| TGTGGATGGCAAGTTATGGT+TGG | - | chr6_1:47769295-47769314 | Msa0887010:CDS | 45.0% | |
| ATACCTTGACCCCTAAATGC+TGG | + | chr6_1:47769384-47769403 | None:intergenic | 45.0% | |
| ATACGACTAGGTGTGAGTAG+CGG | + | chr6_1:47769604-47769623 | None:intergenic | 45.0% | |
| ATAGGCGACCACTCATAGTT+TGG | + | chr6_1:47769933-47769952 | None:intergenic | 45.0% | |
| !! | ACTTTGCCTGGAAAGCATCA+TGG | - | chr6_1:47770025-47770044 | Msa0887010:intron | 45.0% |
| TAAGACCAACTGGACCAAAG+AGG | - | chr6_1:47770176-47770195 | Msa0887010:intron | 45.0% | |
| CGGCTAATCGCATGAGAATT+TGG | - | chr6_1:47770438-47770457 | Msa0887010:intron | 45.0% | |
| GTGCACATGCATAGTCACTT+TGG | - | chr6_1:47770519-47770538 | Msa0887010:intron | 45.0% | |
| ! | TCTGAGATCAAACTGGGCTA+TGG | + | chr6_1:47770863-47770882 | None:intergenic | 45.0% |
| GCATTACAATGGGGTGCAAT+TGG | - | chr6_1:47770895-47770914 | Msa0887010:five_prime_UTR | 45.0% | |
| TGTGGTCAAGCTTATGGTGC+AGG | - | chr6_1:47767397-47767416 | Msa0887010:intron | 50.0% | |
| GACGGCGAAGGAAAACATGT+AGG | + | chr6_1:47767590-47767609 | None:intergenic | 50.0% | |
| ! | GCCATTGGTTGGTGCAAAGA+AGG | - | chr6_1:47767802-47767821 | Msa0887010:CDS | 50.0% |
| ACGAAGCACAGACTCAGACA+CGG | + | chr6_1:47768167-47768186 | None:intergenic | 50.0% | |
| ! | CATAGGTATCGTGTCGGTGT+TGG | - | chr6_1:47768565-47768584 | Msa0887010:intron | 50.0% |
| ACTGGAACACCCCTAATCAG+TGG | - | chr6_1:47768607-47768626 | Msa0887010:intron | 50.0% | |
| CAACCAGCATTTAGGGGTCA+AGG | - | chr6_1:47769378-47769397 | Msa0887010:CDS | 50.0% | |
| GGTCGTTGGTCCGAAATGAT+AGG | - | chr6_1:47769649-47769668 | Msa0887010:intron | 50.0% | |
| CTATGGGGAGGAACAATGTG+CGG | - | chr6_1:47770114-47770133 | Msa0887010:intron | 50.0% | |
| ! | GACTGAGGGGGCTTGATTTT+GGG | + | chr6_1:47770632-47770651 | None:intergenic | 50.0% |
| ! | AGACTGAGGGGGCTTGATTT+TGG | + | chr6_1:47770633-47770652 | None:intergenic | 50.0% |
| ACGAAATTCTAGCCCGTGCT+TGG | + | chr6_1:47770726-47770745 | None:intergenic | 50.0% | |
| GAGAGGCAAATTGACGGCGA+AGG | + | chr6_1:47767602-47767621 | None:intergenic | 55.0% | |
| TTCCAGTGTCAGACACGCGT+CGG | + | chr6_1:47768594-47768613 | None:intergenic | 55.0% | |
| TTGGCTTAGGGTCTATGGGG+AGG | - | chr6_1:47770102-47770121 | Msa0887010:intron | 55.0% | |
| ATAGTGACCCGTGCCAAGCA+CGG | - | chr6_1:47770710-47770729 | Msa0887010:CDS | 55.0% | |
| ATTCTAGCCCGTGCTTGGCA+CGG | + | chr6_1:47770721-47770740 | None:intergenic | 55.0% | |
| ! | TCCTCGGATTAGGCGTGTCC+TGG | - | chr6_1:47768029-47768048 | Msa0887010:intron | 60.0% |
| ACCAGGACACGCCTAATCCG+AGG | + | chr6_1:47768033-47768052 | None:intergenic | 60.0% | |
| TAGTGACCCGTGCCAAGCAC+GGG | - | chr6_1:47770711-47770730 | Msa0887010:CDS | 60.0% | |
| TTCTAGCCCGTGCTTGGCAC+GGG | + | chr6_1:47770720-47770739 | None:intergenic | 60.0% | |
| CACCGACGCGTGTCTGACAC+TGG | - | chr6_1:47768589-47768608 | Msa0887010:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 47765933 | 47770938 | 47765933 | ID=Msa0887010;Name=Msa0887010 |
| chr6_1 | mRNA | 47765933 | 47770938 | 47765933 | ID=Msa0887010-mRNA-1;Parent=Msa0887010;Name=Msa0887010-mRNA-1;_AED=0.18;_eAED=0.18;_QI=105|0.66|0.57|1|1|1|7|445|449 |
| chr6_1 | exon | 47765933 | 47766443 | 47765933 | ID=Msa0887010-mRNA-1:exon:9993;Parent=Msa0887010-mRNA-1 |
| chr6_1 | exon | 47766674 | 47766760 | 47766674 | ID=Msa0887010-mRNA-1:exon:9992;Parent=Msa0887010-mRNA-1 |
| chr6_1 | exon | 47767472 | 47767590 | 47767472 | ID=Msa0887010-mRNA-1:exon:9991;Parent=Msa0887010-mRNA-1 |
| chr6_1 | exon | 47767734 | 47767896 | 47767734 | ID=Msa0887010-mRNA-1:exon:9990;Parent=Msa0887010-mRNA-1 |
| chr6_1 | exon | 47768516 | 47768559 | 47768516 | ID=Msa0887010-mRNA-1:exon:9989;Parent=Msa0887010-mRNA-1 |
| chr6_1 | exon | 47768895 | 47769504 | 47768895 | ID=Msa0887010-mRNA-1:exon:9988;Parent=Msa0887010-mRNA-1 |
| chr6_1 | exon | 47770573 | 47770938 | 47770573 | ID=Msa0887010-mRNA-1:exon:9987;Parent=Msa0887010-mRNA-1 |
| chr6_1 | five_prime_UTR | 47770834 | 47770938 | 47770834 | ID=Msa0887010-mRNA-1:five_prime_utr;Parent=Msa0887010-mRNA-1 |
| chr6_1 | CDS | 47770573 | 47770833 | 47770573 | ID=Msa0887010-mRNA-1:cds;Parent=Msa0887010-mRNA-1 |
| chr6_1 | CDS | 47768895 | 47769504 | 47768895 | ID=Msa0887010-mRNA-1:cds;Parent=Msa0887010-mRNA-1 |
| chr6_1 | CDS | 47768516 | 47768559 | 47768516 | ID=Msa0887010-mRNA-1:cds;Parent=Msa0887010-mRNA-1 |
| chr6_1 | CDS | 47767734 | 47767896 | 47767734 | ID=Msa0887010-mRNA-1:cds;Parent=Msa0887010-mRNA-1 |
| chr6_1 | CDS | 47767472 | 47767590 | 47767472 | ID=Msa0887010-mRNA-1:cds;Parent=Msa0887010-mRNA-1 |
| chr6_1 | CDS | 47766674 | 47766760 | 47766674 | ID=Msa0887010-mRNA-1:cds;Parent=Msa0887010-mRNA-1 |
| chr6_1 | CDS | 47766378 | 47766443 | 47766378 | ID=Msa0887010-mRNA-1:cds;Parent=Msa0887010-mRNA-1 |
| chr6_1 | three_prime_UTR | 47765933 | 47766377 | 47765933 | ID=Msa0887010-mRNA-1:three_prime_utr;Parent=Msa0887010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
