Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0988510 | XP_013452179.1 | 89.892 | 465 | 31 | 2 | 1 | 449 | 1 | 465 | 0.0 | 819 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0988510 | sp|F4JH46|DTX34_ARATH | 45.610 | 467 | 219 | 2 | 11 | 442 | 67 | 533 | 1.05e-145 | 429 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0988510 | A0A072U963 | 89.892 | 465 | 31 | 2 | 1 | 449 | 1 | 465 | 0.0 | 819 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa0988510 | 0.804987 | 1.658852e-49 | -8.615850e-47 |
| Msa0008330 | Msa0988510 | 0.803223 | 3.862011e-49 | -8.615850e-47 |
| Msa0017420 | Msa0988510 | 0.800376 | 1.483476e-48 | -8.615850e-47 |
| Msa0020630 | Msa0988510 | 0.810350 | 1.204445e-50 | -8.615850e-47 |
| Msa0029020 | Msa0988510 | -0.810448 | 1.146899e-50 | -8.615850e-47 |
| Msa0036150 | Msa0988510 | 0.806006 | 1.014378e-49 | -8.615850e-47 |
| Msa0038350 | Msa0988510 | -0.804731 | 1.876251e-49 | -8.615850e-47 |
| Msa0050880 | Msa0988510 | 0.803619 | 3.198026e-49 | -8.615850e-47 |
| Msa0056160 | Msa0988510 | 0.801138 | 1.037165e-48 | -8.615850e-47 |
| Msa0056550 | Msa0988510 | 0.800114 | 1.677178e-48 | -8.615850e-47 |
| Msa0070740 | Msa0988510 | 0.800039 | 1.737058e-48 | -8.615850e-47 |
| Msa0090040 | Msa0988510 | -0.821054 | 4.951459e-53 | -8.615850e-47 |
| Msa0607440 | Msa0988510 | 0.813567 | 2.397438e-51 | -8.615850e-47 |
| Msa0616560 | Msa0988510 | -0.800390 | 1.473714e-48 | -8.615850e-47 |
| Msa0617560 | Msa0988510 | -0.809405 | 1.923706e-50 | -8.615850e-47 |
| Msa0618260 | Msa0988510 | 0.807802 | 4.229629e-50 | -8.615850e-47 |
| Msa0619330 | Msa0988510 | 0.818575 | 1.825263e-52 | -8.615850e-47 |
| Msa0621890 | Msa0988510 | 0.815304 | 9.900344e-52 | -8.615850e-47 |
| Msa0647000 | Msa0988510 | 0.822495 | 2.297561e-53 | -8.615850e-47 |
| Msa0650360 | Msa0988510 | 0.810877 | 9.264701e-51 | -8.615850e-47 |
| Msa0657860 | Msa0988510 | 0.807089 | 5.993630e-50 | -8.615850e-47 |
| Msa0660880 | Msa0988510 | -0.814980 | 1.168317e-51 | -8.615850e-47 |
| Msa0668090 | Msa0988510 | 0.806138 | 9.512877e-50 | -8.615850e-47 |
| Msa0678240 | Msa0988510 | 0.805419 | 1.347411e-49 | -8.615850e-47 |
| Msa0701840 | Msa0988510 | -0.805723 | 1.163054e-49 | -8.615850e-47 |
| Msa0707780 | Msa0988510 | 0.811692 | 6.163679e-51 | -8.615850e-47 |
| Msa0716740 | Msa0988510 | -0.807410 | 5.124042e-50 | -8.615850e-47 |
| Msa0719490 | Msa0988510 | -0.813530 | 2.442801e-51 | -8.615850e-47 |
| Msa0722930 | Msa0988510 | 0.814791 | 1.286846e-51 | -8.615850e-47 |
| Msa0723140 | Msa0988510 | 0.822505 | 2.285277e-53 | -8.615850e-47 |
| Msa0726610 | Msa0988510 | 0.807288 | 5.439565e-50 | -8.615850e-47 |
| Msa0752580 | Msa0988510 | 0.808746 | 2.662298e-50 | -8.615850e-47 |
| Msa0754500 | Msa0988510 | 0.804210 | 2.409342e-49 | -8.615850e-47 |
| Msa0756480 | Msa0988510 | 0.852494 | 4.449296e-61 | -8.615850e-47 |
| Msa0760890 | Msa0988510 | 0.803275 | 3.767932e-49 | -8.615850e-47 |
| Msa0770430 | Msa0988510 | 0.827358 | 1.635253e-54 | -8.615850e-47 |
| Msa0780140 | Msa0988510 | 0.812399 | 4.324427e-51 | -8.615850e-47 |
| Msa0792510 | Msa0988510 | 0.827873 | 1.229687e-54 | -8.615850e-47 |
| Msa0799290 | Msa0988510 | -0.808687 | 2.740543e-50 | -8.615850e-47 |
| Msa0811000 | Msa0988510 | 0.803360 | 3.618890e-49 | -8.615850e-47 |
| Msa0811510 | Msa0988510 | 0.804019 | 2.641297e-49 | -8.615850e-47 |
| Msa0814780 | Msa0988510 | 0.833985 | 3.892507e-56 | -8.615850e-47 |
| Msa0824140 | Msa0988510 | 0.802057 | 6.720984e-49 | -8.615850e-47 |
| Msa0830120 | Msa0988510 | 0.805863 | 1.086956e-49 | -8.615850e-47 |
| Msa0830450 | Msa0988510 | 0.806062 | 9.872247e-50 | -8.615850e-47 |
| Msa0835510 | Msa0988510 | 0.845070 | 5.108048e-59 | -8.615850e-47 |
| Msa0837510 | Msa0988510 | -0.808656 | 2.782680e-50 | -8.615850e-47 |
| Msa0837990 | Msa0988510 | 0.831339 | 1.765502e-55 | -8.615850e-47 |
| Msa0125440 | Msa0988510 | 0.822834 | 1.915904e-53 | -8.615850e-47 |
| Msa0125530 | Msa0988510 | 0.811592 | 6.480188e-51 | -8.615850e-47 |
| Msa0137120 | Msa0988510 | -0.811106 | 8.264150e-51 | -8.615850e-47 |
| Msa0141670 | Msa0988510 | 0.801234 | 9.912225e-49 | -8.615850e-47 |
| Msa0159750 | Msa0988510 | 0.813746 | 2.189414e-51 | -8.615850e-47 |
| Msa0162070 | Msa0988510 | 0.801887 | 7.282233e-49 | -8.615850e-47 |
| Msa0164630 | Msa0988510 | 0.807932 | 3.970490e-50 | -8.615850e-47 |
| Msa0172370 | Msa0988510 | 0.805727 | 1.160920e-49 | -8.615850e-47 |
| Msa0185640 | Msa0988510 | -0.802251 | 6.131057e-49 | -8.615850e-47 |
| Msa0213080 | Msa0988510 | 0.800639 | 1.311598e-48 | -8.615850e-47 |
| Msa0217470 | Msa0988510 | 0.804870 | 1.755196e-49 | -8.615850e-47 |
| Msa0227500 | Msa0988510 | 0.809355 | 1.971649e-50 | -8.615850e-47 |
| Msa0365360 | Msa0988510 | 0.808955 | 2.401670e-50 | -8.615850e-47 |
| Msa0371610 | Msa0988510 | 0.809736 | 1.633197e-50 | -8.615850e-47 |
| Msa0389050 | Msa0988510 | 0.807326 | 5.337459e-50 | -8.615850e-47 |
| Msa0389060 | Msa0988510 | 0.804238 | 2.377251e-49 | -8.615850e-47 |
| Msa0395510 | Msa0988510 | 0.802055 | 6.726251e-49 | -8.615850e-47 |
| Msa0405250 | Msa0988510 | -0.819198 | 1.317348e-52 | -8.615850e-47 |
| Msa0409820 | Msa0988510 | 0.818600 | 1.801614e-52 | -8.615850e-47 |
| Msa0412540 | Msa0988510 | 0.810389 | 1.181182e-50 | -8.615850e-47 |
| Msa0413740 | Msa0988510 | 0.823191 | 1.581612e-53 | -8.615850e-47 |
| Msa0418000 | Msa0988510 | 0.816565 | 5.179822e-52 | -8.615850e-47 |
| Msa0423600 | Msa0988510 | 0.805551 | 1.264247e-49 | -8.615850e-47 |
| Msa0437710 | Msa0988510 | 0.814443 | 1.537055e-51 | -8.615850e-47 |
| Msa0450460 | Msa0988510 | 0.809348 | 1.978069e-50 | -8.615850e-47 |
| Msa0457370 | Msa0988510 | 0.831793 | 1.364887e-55 | -8.615850e-47 |
| Msa0458790 | Msa0988510 | 0.805165 | 1.522751e-49 | -8.615850e-47 |
| Msa0470650 | Msa0988510 | 0.800861 | 1.181616e-48 | -8.615850e-47 |
| Msa0475740 | Msa0988510 | 0.800434 | 1.443716e-48 | -8.615850e-47 |
| Msa0980440 | Msa0988510 | 0.801988 | 6.944620e-49 | -8.615850e-47 |
| Msa0981740 | Msa0988510 | 0.810878 | 9.259199e-51 | -8.615850e-47 |
| Msa0988500 | Msa0988510 | 0.836213 | 1.067541e-56 | -8.615850e-47 |
| Msa0988510 | Msa1014350 | 0.821853 | 3.236646e-53 | -8.615850e-47 |
| Msa0988510 | Msa1018720 | 0.814327 | 1.630205e-51 | -8.615850e-47 |
| Msa0988510 | Msa1032350 | 0.803873 | 2.831431e-49 | -8.615850e-47 |
| Msa0988510 | Msa1036350 | 0.825153 | 5.476147e-54 | -8.615850e-47 |
| Msa0988510 | Msa1036390 | 0.813074 | 3.076141e-51 | -8.615850e-47 |
| Msa0988510 | Msa1038820 | 0.826191 | 3.106321e-54 | -8.615850e-47 |
| Msa0988510 | Msa1046610 | 0.803025 | 4.244524e-49 | -8.615850e-47 |
| Msa0988510 | Msa1054890 | 0.807354 | 5.265307e-50 | -8.615850e-47 |
| Msa0988510 | Msa1069300 | 0.801744 | 7.791410e-49 | -8.615850e-47 |
| Msa0988510 | Msa1072350 | 0.806806 | 6.879543e-50 | -8.615850e-47 |
| Msa0988510 | Msa1076630 | 0.834682 | 2.601827e-56 | -8.615850e-47 |
| Msa0988510 | Msa1076680 | 0.825777 | 3.894924e-54 | -8.615850e-47 |
| Msa0988510 | Msa1080460 | 0.821067 | 4.916167e-53 | -8.615850e-47 |
| Msa0988510 | Msa1080470 | 0.812440 | 4.235584e-51 | -8.615850e-47 |
| Msa0988510 | Msa1081600 | 0.823156 | 1.611527e-53 | -8.615850e-47 |
| Msa0988510 | Msa1081700 | 0.830803 | 2.390441e-55 | -8.615850e-47 |
| Msa0988510 | Msa1093390 | 0.822681 | 2.079535e-53 | -8.615850e-47 |
| Msa0988510 | Msa1108140 | 0.800929 | 1.144480e-48 | -8.615850e-47 |
| Msa0988510 | Msa1108780 | 0.821479 | 3.949779e-53 | -8.615850e-47 |
| Msa0988510 | Msa1113210 | 0.830375 | 3.043103e-55 | -8.615850e-47 |
| Msa0988510 | Msa1126170 | 0.810244 | 1.269526e-50 | -8.615850e-47 |
| Msa0988510 | Msa1130650 | 0.825551 | 4.407480e-54 | -8.615850e-47 |
| Msa0988510 | Msa1133660 | 0.836734 | 7.867770e-57 | -8.615850e-47 |
| Msa0988510 | Msa1139240 | 0.803554 | 3.297783e-49 | -8.615850e-47 |
| Msa0988510 | Msa1151960 | 0.825811 | 3.823294e-54 | -8.615850e-47 |
| Msa0988510 | Msa1154820 | 0.806810 | 6.865107e-50 | -8.615850e-47 |
| Msa0988510 | Msa1161760 | 0.804384 | 2.216368e-49 | -8.615850e-47 |
| Msa0988510 | Msa1166370 | 0.829415 | 5.213390e-55 | -8.615850e-47 |
| Msa0988510 | Msa1167000 | 0.827206 | 1.778581e-54 | -8.615850e-47 |
| Msa0988510 | Msa1182830 | 0.833534 | 5.046831e-56 | -8.615850e-47 |
| Msa0988510 | Msa1201990 | 0.817661 | 2.936920e-52 | -8.615850e-47 |
| Msa0988510 | Msa1207480 | -0.803701 | 3.073959e-49 | -8.615850e-47 |
| Msa0988510 | Msa1208250 | 0.807245 | 5.555040e-50 | -8.615850e-47 |
| Msa0988510 | Msa1221200 | -0.813704 | 2.236586e-51 | -8.615850e-47 |
| Msa0988510 | Msa1222580 | 0.800899 | 1.160434e-48 | -8.615850e-47 |
| Msa0988510 | Msa1223460 | 0.818275 | 2.133991e-52 | -8.615850e-47 |
| Msa0988510 | Msa1226600 | 0.803238 | 3.834755e-49 | -8.615850e-47 |
| Msa0988510 | Msa1233770 | 0.831413 | 1.692648e-55 | -8.615850e-47 |
| Msa0988510 | Msa1254770 | 0.818206 | 2.211816e-52 | -8.615850e-47 |
| Msa0988510 | Msa1254800 | 0.817109 | 3.910844e-52 | -8.615850e-47 |
| Msa0988510 | Msa1254950 | 0.807657 | 4.541460e-50 | -8.615850e-47 |
| Msa0988510 | Msa1258280 | 0.800592 | 1.340463e-48 | -8.615850e-47 |
| Msa0988510 | Msa1262310 | 0.809760 | 1.613845e-50 | -8.615850e-47 |
| Msa0988510 | Msa1264560 | 0.816289 | 5.970147e-52 | -8.615850e-47 |
| Msa0988510 | Msa1265820 | -0.801353 | 9.374211e-49 | -8.615850e-47 |
| Msa0988510 | Msa1276080 | 0.822126 | 2.799214e-53 | -8.615850e-47 |
| Msa0988510 | Msa1279870 | 0.812589 | 3.929409e-51 | -8.615850e-47 |
| Msa0988510 | Msa1283770 | 0.806109 | 9.649517e-50 | -8.615850e-47 |
| Msa0988510 | Msa1287160 | 0.802330 | 5.903754e-49 | -8.615850e-47 |
| Msa0988510 | Msa1295010 | 0.826944 | 2.053986e-54 | -8.615850e-47 |
| Msa0988510 | Msa1295690 | 0.802728 | 4.888516e-49 | -8.615850e-47 |
| Msa0988510 | Msa1296960 | -0.810396 | 1.176731e-50 | -8.615850e-47 |
| Msa0988510 | Msa1302150 | 0.812288 | 4.572022e-51 | -8.615850e-47 |
| Msa0988510 | Msa1326000 | 0.837779 | 4.249539e-57 | -8.615850e-47 |
| Msa0988510 | Msa1329990 | 0.830906 | 2.255086e-55 | -8.615850e-47 |
| Msa0988510 | Msa1355260 | 0.815981 | 6.997866e-52 | -8.615850e-47 |
| Msa0988510 | Msa1357380 | 0.810425 | 1.160270e-50 | -8.615850e-47 |
| Msa0988510 | Msa1371080 | -0.819805 | 9.574054e-53 | -8.615850e-47 |
| Msa0988510 | Msa1373950 | 0.833505 | 5.132509e-56 | -8.615850e-47 |
| Msa0988510 | Msa1385620 | 0.803371 | 3.599370e-49 | -8.615850e-47 |
| Msa0988510 | Msa1397540 | 0.808705 | 2.716441e-50 | -8.615850e-47 |
| Msa0988510 | Msa1418200 | 0.818635 | 1.768440e-52 | -8.615850e-47 |
| Msa0988510 | Msa1428440 | 0.804288 | 2.321816e-49 | -8.615850e-47 |
| Msa0988510 | Msa1435670 | 0.825398 | 4.790431e-54 | -8.615850e-47 |
| Msa0988510 | Msa1460310 | -0.803588 | 3.244774e-49 | -8.615850e-47 |
| Msa0988510 | Msa1464560 | 0.805259 | 1.455417e-49 | -8.615850e-47 |
| Msa0286790 | Msa0988510 | 0.828195 | 1.029177e-54 | -8.615850e-47 |
| Msa0296610 | Msa0988510 | 0.806959 | 6.384550e-50 | -8.615850e-47 |
| Msa0298940 | Msa0988510 | 0.814078 | 1.850193e-51 | -8.615850e-47 |
| Msa0302990 | Msa0988510 | -0.804552 | 2.044904e-49 | -8.615850e-47 |
| Msa0311330 | Msa0988510 | 0.801836 | 7.460081e-49 | -8.615850e-47 |
| Msa0312780 | Msa0988510 | 0.806131 | 9.548537e-50 | -8.615850e-47 |
| Msa0334980 | Msa0988510 | 0.806867 | 6.677338e-50 | -8.615850e-47 |
| Msa0342200 | Msa0988510 | 0.802401 | 5.710112e-49 | -8.615850e-47 |
| Msa0342340 | Msa0988510 | -0.801421 | 9.076812e-49 | -8.615850e-47 |
| Msa0350020 | Msa0988510 | 0.829952 | 3.860249e-55 | -8.615850e-47 |
| Msa0352200 | Msa0988510 | 0.804031 | 2.626007e-49 | -8.615850e-47 |
| Msa0357380 | Msa0988510 | 0.800679 | 1.287326e-48 | -8.615850e-47 |
| Msa0498830 | Msa0988510 | 0.820972 | 5.169840e-53 | -8.615850e-47 |
| Msa0504730 | Msa0988510 | 0.803512 | 3.364668e-49 | -8.615850e-47 |
| Msa0505390 | Msa0988510 | 0.821822 | 3.291087e-53 | -8.615850e-47 |
| Msa0509970 | Msa0988510 | 0.813201 | 2.885434e-51 | -8.615850e-47 |
| Msa0525240 | Msa0988510 | 0.820373 | 7.100390e-53 | -8.615850e-47 |
| Msa0530930 | Msa0988510 | 0.823733 | 1.181842e-53 | -8.615850e-47 |
| Msa0535020 | Msa0988510 | 0.818366 | 2.034768e-52 | -8.615850e-47 |
| Msa0535050 | Msa0988510 | 0.819081 | 1.400529e-52 | -8.615850e-47 |
| Msa0549740 | Msa0988510 | 0.803879 | 2.823192e-49 | -8.615850e-47 |
| Msa0553520 | Msa0988510 | 0.808127 | 3.606974e-50 | -8.615850e-47 |
| Msa0557680 | Msa0988510 | 0.808331 | 3.263385e-50 | -8.615850e-47 |
| Msa0563140 | Msa0988510 | 0.828534 | 8.524432e-55 | -8.615850e-47 |
| Msa0574170 | Msa0988510 | 0.814381 | 1.585789e-51 | -8.615850e-47 |
| Msa0575250 | Msa0988510 | 0.803290 | 3.740153e-49 | -8.615850e-47 |
| Msa0576420 | Msa0988510 | 0.806225 | 9.123646e-50 | -8.615850e-47 |
| Msa0582110 | Msa0988510 | 0.800725 | 1.259751e-48 | -8.615850e-47 |
| Msa0591780 | Msa0988510 | 0.819445 | 1.157325e-52 | -8.615850e-47 |
| Msa0598250 | Msa0988510 | 0.810923 | 9.054843e-51 | -8.615850e-47 |
| Msa0843280 | Msa0988510 | 0.806241 | 9.052275e-50 | -8.615850e-47 |
| Msa0847200 | Msa0988510 | 0.807207 | 5.657131e-50 | -8.615850e-47 |
| Msa0851740 | Msa0988510 | 0.805445 | 1.330695e-49 | -8.615850e-47 |
| Msa0863250 | Msa0988510 | 0.817356 | 3.441657e-52 | -8.615850e-47 |
| Msa0887000 | Msa0988510 | 0.834309 | 3.228850e-56 | -8.615850e-47 |
| Msa0887010 | Msa0988510 | 0.961423 | 1.099695e-119 | -8.615850e-47 |
| Msa0951720 | Msa0988510 | 0.815471 | 9.091173e-52 | -8.615850e-47 |
| Msa0951770 | Msa0988510 | 0.816820 | 4.540596e-52 | -8.615850e-47 |
| Msa0964680 | Msa0988510 | 0.801044 | 1.084316e-48 | -8.615850e-47 |
| Msa0970050 | Msa0988510 | 0.857565 | 1.497321e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0988510 | MtrunA17_Chr6g0468531 | 86.364 | 484 | 31 | 2 | 1 | 449 | 1 | 484 | 0.0 | 810 |
| Msa0988510 | MtrunA17_Chr6g0468521 | 76.033 | 484 | 80 | 3 | 1 | 449 | 1 | 483 | 0.0 | 726 |
| Msa0988510 | MtrunA17_Chr6g0468511 | 71.757 | 478 | 99 | 3 | 1 | 443 | 1 | 477 | 0.0 | 649 |
| Msa0988510 | MtrunA17_Chr1g0202761 | 45.825 | 491 | 221 | 5 | 2 | 447 | 4 | 494 | 1.51e-145 | 424 |
| Msa0988510 | MtrunA17_Chr7g0248051 | 44.760 | 458 | 218 | 2 | 11 | 433 | 50 | 507 | 3.58e-123 | 368 |
| Msa0988510 | MtrunA17_Chr5g0412541 | 37.527 | 461 | 251 | 5 | 23 | 446 | 28 | 488 | 3.35e-101 | 310 |
| Msa0988510 | MtrunA17_Chr5g0412771 | 38.288 | 444 | 238 | 3 | 32 | 439 | 57 | 500 | 7.35e-101 | 310 |
| Msa0988510 | MtrunA17_Chr8g0368001 | 34.560 | 489 | 271 | 6 | 3 | 444 | 13 | 499 | 2.73e-100 | 309 |
| Msa0988510 | MtrunA17_Chr3g0132531 | 38.445 | 476 | 250 | 5 | 2 | 440 | 23 | 492 | 1.28e-98 | 304 |
| Msa0988510 | MtrunA17_Chr7g0254521 | 36.526 | 449 | 249 | 3 | 29 | 441 | 29 | 477 | 1.93e-97 | 301 |
| Msa0988510 | MtrunA17_Chr7g0254511 | 34.989 | 463 | 264 | 4 | 20 | 447 | 19 | 479 | 1.24e-91 | 286 |
| Msa0988510 | MtrunA17_Chr1g0154441 | 38.817 | 389 | 202 | 4 | 90 | 442 | 1 | 389 | 4.85e-91 | 281 |
| Msa0988510 | MtrunA17_Chr4g0024501 | 35.076 | 459 | 261 | 4 | 22 | 443 | 55 | 513 | 1.00e-89 | 282 |
| Msa0988510 | MtrunA17_Chr2g0322671 | 34.008 | 494 | 276 | 6 | 2 | 445 | 10 | 503 | 1.36e-88 | 278 |
| Msa0988510 | MtrunA17_Chr7g0254531 | 36.616 | 396 | 215 | 3 | 90 | 449 | 1 | 396 | 5.00e-86 | 268 |
| Msa0988510 | MtrunA17_Chr2g0288281 | 37.018 | 389 | 208 | 3 | 90 | 441 | 1 | 389 | 1.66e-84 | 264 |
| Msa0988510 | MtrunA17_Chr5g0412571 | 36.567 | 402 | 218 | 5 | 79 | 443 | 29 | 430 | 8.74e-79 | 251 |
| Msa0988510 | MtrunA17_Chr6g0460541 | 37.121 | 396 | 212 | 3 | 89 | 447 | 4 | 399 | 5.14e-77 | 246 |
| Msa0988510 | MtrunA17_Chr5g0442331 | 33.645 | 428 | 247 | 4 | 59 | 449 | 74 | 501 | 7.77e-73 | 238 |
| Msa0988510 | MtrunA17_Chr3g0132541 | 34.000 | 400 | 243 | 3 | 32 | 430 | 42 | 421 | 3.13e-71 | 231 |
| Msa0988510 | MtrunA17_Chr6g0483361 | 32.374 | 417 | 243 | 5 | 59 | 436 | 53 | 469 | 2.06e-63 | 212 |
| Msa0988510 | MtrunA17_Chr1g0208791 | 29.851 | 469 | 287 | 7 | 1 | 428 | 10 | 477 | 7.00e-61 | 206 |
| Msa0988510 | MtrunA17_Chr6g0483381 | 29.350 | 477 | 288 | 9 | 1 | 436 | 3 | 471 | 3.59e-60 | 204 |
| Msa0988510 | MtrunA17_Chr6g0477961 | 30.935 | 417 | 249 | 5 | 59 | 436 | 55 | 471 | 2.85e-58 | 199 |
| Msa0988510 | MtrunA17_Chr2g0317131 | 31.915 | 470 | 272 | 7 | 2 | 427 | 11 | 476 | 1.31e-57 | 197 |
| Msa0988510 | MtrunA17_Chr7g0251331 | 29.095 | 464 | 286 | 6 | 24 | 448 | 19 | 478 | 1.23e-56 | 194 |
| Msa0988510 | MtrunA17_Chr8g0392601 | 27.646 | 463 | 287 | 6 | 12 | 437 | 4 | 455 | 3.27e-56 | 193 |
| Msa0988510 | MtrunA17_Chr6g0483351 | 32.031 | 384 | 214 | 5 | 90 | 430 | 1 | 380 | 1.44e-54 | 187 |
| Msa0988510 | MtrunA17_Chr1g0208821 | 30.689 | 479 | 284 | 10 | 1 | 437 | 8 | 480 | 2.01e-54 | 189 |
| Msa0988510 | MtrunA17_Chr7g0254501 | 32.890 | 301 | 167 | 2 | 175 | 440 | 2 | 302 | 6.94e-53 | 180 |
| Msa0988510 | MtrunA17_Chr6g0483331 | 29.386 | 456 | 268 | 7 | 23 | 436 | 12 | 455 | 9.57e-53 | 184 |
| Msa0988510 | MtrunA17_Chr2g0317151 | 31.222 | 442 | 259 | 5 | 30 | 427 | 26 | 466 | 2.38e-52 | 183 |
| Msa0988510 | MtrunA17_Chr1g0208881 | 29.530 | 447 | 276 | 4 | 28 | 436 | 22 | 467 | 2.61e-52 | 182 |
| Msa0988510 | MtrunA17_Chr6g0483161 | 32.687 | 361 | 223 | 4 | 89 | 430 | 2 | 361 | 4.15e-51 | 177 |
| Msa0988510 | MtrunA17_Chr2g0317171 | 29.299 | 471 | 288 | 5 | 1 | 427 | 1 | 470 | 5.36e-51 | 179 |
| Msa0988510 | MtrunA17_Chr6g0483341 | 28.540 | 452 | 277 | 7 | 23 | 436 | 41 | 484 | 5.78e-51 | 179 |
| Msa0988510 | MtrunA17_Chr6g0449061 | 29.012 | 486 | 292 | 11 | 3 | 449 | 14 | 485 | 1.59e-50 | 178 |
| Msa0988510 | MtrunA17_Chr1g0208891 | 29.462 | 465 | 287 | 5 | 13 | 436 | 2 | 466 | 9.34e-50 | 176 |
| Msa0988510 | MtrunA17_Chr2g0317161 | 29.864 | 442 | 265 | 5 | 30 | 427 | 24 | 464 | 1.33e-48 | 173 |
| Msa0988510 | MtrunA17_Chr2g0317221 | 31.830 | 377 | 218 | 4 | 89 | 427 | 9 | 384 | 1.37e-48 | 171 |
| Msa0988510 | MtrunA17_Chr5g0397991 | 28.178 | 472 | 288 | 8 | 1 | 431 | 41 | 502 | 2.51e-48 | 173 |
| Msa0988510 | MtrunA17_Chr6g0460531 | 37.354 | 257 | 157 | 2 | 14 | 266 | 4 | 260 | 7.61e-47 | 162 |
| Msa0988510 | MtrunA17_Chr7g0251321 | 30.874 | 366 | 233 | 6 | 90 | 436 | 1 | 365 | 3.51e-46 | 164 |
| Msa0988510 | MtrunA17_Chr5g0440661 | 31.832 | 333 | 195 | 7 | 90 | 419 | 1 | 304 | 7.63e-43 | 153 |
| Msa0988510 | MtrunA17_Chr1g0203791 | 25.974 | 462 | 303 | 4 | 4 | 428 | 39 | 498 | 3.28e-39 | 148 |
| Msa0988510 | MtrunA17_Chr6g0473701 | 26.535 | 456 | 292 | 6 | 30 | 447 | 127 | 577 | 1.87e-37 | 144 |
| Msa0988510 | MtrunA17_Chr8g0364761 | 31.599 | 269 | 180 | 3 | 25 | 290 | 48 | 315 | 1.57e-36 | 137 |
| Msa0988510 | MtrunA17_Chr5g0428251 | 24.380 | 484 | 325 | 6 | 2 | 448 | 27 | 506 | 3.27e-36 | 140 |
| Msa0988510 | MtrunA17_Chr6g0467321 | 24.045 | 445 | 290 | 6 | 31 | 428 | 42 | 485 | 7.20e-36 | 139 |
| Msa0988510 | MtrunA17_Chr3g0140931 | 25.618 | 445 | 291 | 5 | 32 | 437 | 51 | 494 | 7.80e-36 | 139 |
| Msa0988510 | MtrunA17_Chr8g0364751 | 46.565 | 131 | 70 | 0 | 306 | 436 | 45 | 175 | 1.47e-28 | 111 |
| Msa0988510 | MtrunA17_Chr8g0389801 | 23.744 | 438 | 295 | 5 | 31 | 431 | 23 | 458 | 2.27e-28 | 116 |
| Msa0988510 | MtrunA17_Chr4g0013031 | 23.203 | 487 | 326 | 9 | 3 | 449 | 42 | 520 | 1.49e-27 | 115 |
| Msa0988510 | MtrunA17_Chr6g0460521 | 31.944 | 216 | 112 | 3 | 265 | 445 | 1 | 216 | 5.40e-25 | 102 |
| Msa0988510 | MtrunA17_Chr6g0483241 | 38.889 | 180 | 108 | 1 | 89 | 266 | 2 | 181 | 3.44e-23 | 96.3 |
| Msa0988510 | MtrunA17_Chr5g0442311 | 34.078 | 179 | 116 | 1 | 90 | 266 | 1 | 179 | 1.69e-22 | 94.4 |
| Msa0988510 | MtrunA17_Chr2g0295631 | 20.879 | 455 | 299 | 6 | 31 | 428 | 20 | 470 | 1.66e-19 | 90.9 |
| Msa0988510 | MtrunA17_Chr7g0254491 | 37.168 | 113 | 65 | 1 | 5 | 117 | 10 | 116 | 3.82e-16 | 74.3 |
| Msa0988510 | MtrunA17_Chr6g0483221 | 30.392 | 102 | 71 | 0 | 328 | 429 | 54 | 155 | 4.85e-14 | 70.1 |
| Msa0988510 | MtrunA17_Chr6g0483264 | 25.980 | 204 | 116 | 5 | 268 | 436 | 1 | 204 | 4.91e-13 | 68.2 |
| Msa0988510 | MtrunA17_Chr6g0483261 | 30.275 | 109 | 76 | 0 | 328 | 436 | 54 | 162 | 4.99e-13 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0988510 | AT4G00350.1 | 45.610 | 467 | 219 | 2 | 11 | 442 | 67 | 533 | 1.07e-146 | 429 |
| Msa0988510 | AT4G25640.1 | 47.412 | 483 | 218 | 4 | 3 | 449 | 5 | 487 | 2.92e-140 | 411 |
| Msa0988510 | AT4G25640.2 | 47.412 | 483 | 218 | 4 | 3 | 449 | 5 | 487 | 6.54e-140 | 411 |
| Msa0988510 | AT4G25640.3 | 47.564 | 431 | 191 | 3 | 3 | 398 | 5 | 435 | 9.50e-125 | 370 |
| Msa0988510 | AT1G47530.1 | 39.286 | 448 | 236 | 3 | 31 | 442 | 34 | 481 | 2.52e-113 | 342 |
| Msa0988510 | AT1G23300.1 | 36.920 | 474 | 263 | 3 | 12 | 449 | 24 | 497 | 6.93e-104 | 318 |
| Msa0988510 | AT1G12950.1 | 35.146 | 478 | 273 | 4 | 9 | 449 | 43 | 520 | 1.84e-100 | 310 |
| Msa0988510 | AT1G47530.2 | 41.388 | 389 | 192 | 3 | 90 | 442 | 1 | 389 | 1.98e-100 | 306 |
| Msa0988510 | AT5G38030.1 | 35.537 | 484 | 271 | 6 | 2 | 446 | 17 | 498 | 5.47e-100 | 308 |
| Msa0988510 | AT3G26590.1 | 36.266 | 466 | 261 | 3 | 10 | 439 | 23 | 488 | 4.67e-98 | 303 |
| Msa0988510 | AT1G61890.1 | 34.382 | 445 | 255 | 4 | 36 | 443 | 51 | 495 | 3.72e-95 | 296 |
| Msa0988510 | AT1G11670.1 | 33.197 | 488 | 280 | 6 | 1 | 443 | 12 | 498 | 6.05e-95 | 295 |
| Msa0988510 | AT5G44050.1 | 35.217 | 460 | 261 | 6 | 24 | 446 | 32 | 491 | 1.30e-91 | 286 |
| Msa0988510 | AT1G61890.2 | 33.929 | 448 | 259 | 4 | 19 | 429 | 34 | 481 | 5.73e-91 | 285 |
| Msa0988510 | AT4G21910.3 | 34.608 | 497 | 272 | 9 | 1 | 446 | 13 | 507 | 9.27e-91 | 285 |
| Msa0988510 | AT4G21910.1 | 34.608 | 497 | 272 | 9 | 1 | 446 | 13 | 507 | 9.27e-91 | 285 |
| Msa0988510 | AT4G21910.2 | 36.000 | 450 | 248 | 6 | 36 | 446 | 61 | 509 | 2.41e-90 | 283 |
| Msa0988510 | AT4G21910.4 | 36.000 | 450 | 248 | 6 | 36 | 446 | 61 | 509 | 2.41e-90 | 283 |
| Msa0988510 | AT5G65380.1 | 36.192 | 478 | 262 | 6 | 2 | 442 | 13 | 484 | 4.83e-90 | 282 |
| Msa0988510 | AT3G21690.1 | 34.066 | 455 | 261 | 4 | 32 | 449 | 52 | 504 | 5.44e-87 | 275 |
| Msa0988510 | AT4G21903.1 | 36.574 | 432 | 235 | 5 | 53 | 446 | 74 | 504 | 1.23e-86 | 274 |
| Msa0988510 | AT1G33080.1 | 36.481 | 466 | 253 | 5 | 25 | 447 | 29 | 494 | 2.62e-86 | 273 |
| Msa0988510 | AT3G26590.2 | 37.565 | 386 | 205 | 3 | 90 | 439 | 1 | 386 | 5.18e-84 | 264 |
| Msa0988510 | AT1G33080.2 | 37.162 | 444 | 243 | 4 | 25 | 432 | 29 | 472 | 1.92e-83 | 265 |
| Msa0988510 | AT1G33110.1 | 35.991 | 464 | 255 | 6 | 12 | 439 | 22 | 479 | 2.76e-83 | 265 |
| Msa0988510 | AT1G33100.1 | 33.895 | 475 | 272 | 4 | 1 | 439 | 8 | 476 | 8.51e-83 | 263 |
| Msa0988510 | AT4G21903.2 | 36.715 | 414 | 224 | 4 | 53 | 429 | 74 | 486 | 1.36e-81 | 261 |
| Msa0988510 | AT3G03620.2 | 33.264 | 484 | 272 | 7 | 7 | 449 | 20 | 493 | 1.52e-81 | 260 |
| Msa0988510 | AT3G03620.1 | 33.264 | 484 | 272 | 7 | 7 | 449 | 20 | 493 | 1.52e-81 | 260 |
| Msa0988510 | AT3G59030.1 | 34.906 | 424 | 239 | 5 | 59 | 445 | 78 | 501 | 1.40e-79 | 256 |
| Msa0988510 | AT4G21903.3 | 36.709 | 395 | 212 | 4 | 90 | 446 | 1 | 395 | 1.55e-79 | 252 |
| Msa0988510 | AT1G61890.3 | 34.663 | 401 | 225 | 4 | 36 | 399 | 51 | 451 | 2.58e-79 | 254 |
| Msa0988510 | AT1G33090.1 | 32.974 | 464 | 269 | 4 | 12 | 439 | 22 | 479 | 3.82e-78 | 251 |
| Msa0988510 | AT5G10420.1 | 35.730 | 459 | 258 | 4 | 25 | 446 | 31 | 489 | 3.62e-75 | 243 |
| Msa0988510 | AT5G17700.2 | 32.848 | 481 | 276 | 5 | 1 | 442 | 8 | 480 | 2.11e-74 | 242 |
| Msa0988510 | AT5G17700.1 | 32.848 | 481 | 276 | 5 | 1 | 442 | 8 | 480 | 2.11e-74 | 242 |
| Msa0988510 | AT2G04070.1 | 31.416 | 452 | 265 | 6 | 32 | 443 | 27 | 473 | 2.57e-62 | 209 |
| Msa0988510 | AT2G04080.1 | 29.399 | 449 | 278 | 6 | 32 | 443 | 27 | 473 | 2.59e-60 | 204 |
| Msa0988510 | AT2G04040.1 | 29.325 | 474 | 290 | 6 | 13 | 443 | 2 | 473 | 1.45e-58 | 199 |
| Msa0988510 | AT2G04080.2 | 29.128 | 436 | 272 | 5 | 32 | 430 | 27 | 462 | 6.35e-58 | 197 |
| Msa0988510 | AT2G34360.1 | 31.220 | 410 | 251 | 4 | 59 | 437 | 54 | 463 | 9.77e-58 | 197 |
| Msa0988510 | AT1G73700.1 | 30.864 | 486 | 287 | 8 | 1 | 448 | 1 | 475 | 3.21e-57 | 196 |
| Msa0988510 | AT1G66760.2 | 27.778 | 486 | 303 | 6 | 1 | 446 | 5 | 482 | 3.50e-57 | 196 |
| Msa0988510 | AT1G66760.1 | 28.511 | 470 | 291 | 5 | 1 | 433 | 5 | 466 | 6.37e-56 | 192 |
| Msa0988510 | AT2G04050.1 | 30.290 | 482 | 291 | 8 | 1 | 444 | 1 | 475 | 7.35e-56 | 192 |
| Msa0988510 | AT1G33110.2 | 33.763 | 388 | 215 | 6 | 12 | 363 | 22 | 403 | 1.65e-55 | 189 |
| Msa0988510 | AT1G71140.1 | 29.536 | 474 | 277 | 7 | 11 | 436 | 3 | 467 | 2.98e-55 | 191 |
| Msa0988510 | AT5G52450.1 | 31.306 | 444 | 267 | 5 | 35 | 441 | 30 | 472 | 3.45e-55 | 191 |
| Msa0988510 | AT1G15150.1 | 28.387 | 465 | 294 | 6 | 20 | 447 | 21 | 483 | 1.11e-54 | 189 |
| Msa0988510 | AT2G34360.2 | 31.234 | 381 | 247 | 3 | 59 | 437 | 54 | 421 | 4.95e-54 | 187 |
| Msa0988510 | AT1G15170.1 | 29.474 | 475 | 292 | 7 | 7 | 438 | 3 | 477 | 5.34e-53 | 185 |
| Msa0988510 | AT1G15160.1 | 27.527 | 465 | 298 | 5 | 20 | 447 | 21 | 483 | 3.71e-51 | 180 |
| Msa0988510 | AT2G04100.1 | 28.033 | 478 | 288 | 6 | 2 | 442 | 19 | 477 | 7.61e-51 | 179 |
| Msa0988510 | AT2G04090.1 | 28.243 | 478 | 294 | 7 | 1 | 436 | 1 | 471 | 3.36e-50 | 177 |
| Msa0988510 | AT1G66780.1 | 27.273 | 473 | 300 | 8 | 5 | 436 | 7 | 476 | 1.16e-49 | 176 |
| Msa0988510 | AT2G04100.2 | 28.541 | 466 | 277 | 6 | 2 | 430 | 19 | 465 | 1.63e-49 | 175 |
| Msa0988510 | AT3G23560.1 | 27.623 | 467 | 295 | 6 | 2 | 427 | 7 | 471 | 7.20e-49 | 174 |
| Msa0988510 | AT1G64820.1 | 27.521 | 476 | 299 | 9 | 1 | 436 | 1 | 470 | 1.29e-47 | 171 |
| Msa0988510 | AT3G23550.1 | 27.778 | 432 | 271 | 4 | 40 | 432 | 39 | 468 | 1.40e-47 | 170 |
| Msa0988510 | AT1G15180.1 | 29.474 | 475 | 290 | 7 | 8 | 438 | 5 | 478 | 1.72e-47 | 170 |
| Msa0988510 | AT5G17700.3 | 29.293 | 396 | 239 | 4 | 1 | 360 | 8 | 398 | 3.61e-45 | 162 |
| Msa0988510 | AT3G59030.2 | 30.383 | 339 | 199 | 5 | 59 | 360 | 78 | 416 | 5.74e-45 | 162 |
| Msa0988510 | AT1G15170.2 | 30.484 | 351 | 207 | 5 | 125 | 438 | 8 | 358 | 2.68e-42 | 153 |
| Msa0988510 | AT1G15150.2 | 28.779 | 344 | 208 | 5 | 141 | 447 | 24 | 367 | 9.74e-41 | 149 |
| Msa0988510 | AT4G29140.1 | 24.070 | 457 | 305 | 6 | 31 | 449 | 55 | 507 | 1.00e-36 | 141 |
| Msa0988510 | AT1G66760.3 | 29.290 | 338 | 202 | 4 | 133 | 433 | 1 | 338 | 2.04e-36 | 137 |
| Msa0988510 | AT5G19700.1 | 24.684 | 474 | 306 | 7 | 1 | 428 | 1 | 469 | 4.34e-36 | 139 |
| Msa0988510 | AT2G38510.1 | 23.144 | 458 | 308 | 7 | 31 | 447 | 5 | 459 | 8.37e-33 | 130 |
| Msa0988510 | AT1G66760.4 | 29.932 | 294 | 182 | 5 | 1 | 285 | 5 | 283 | 6.64e-30 | 120 |
| Msa0988510 | AT3G23560.2 | 29.293 | 297 | 202 | 4 | 2 | 292 | 7 | 301 | 1.14e-29 | 120 |
| Msa0988510 | AT1G58340.1 | 23.684 | 456 | 310 | 5 | 13 | 431 | 40 | 494 | 2.49e-29 | 120 |
| Msa0988510 | AT1G71870.1 | 21.399 | 486 | 313 | 9 | 1 | 428 | 1 | 475 | 1.04e-27 | 115 |
| Msa0988510 | AT5G52050.1 | 22.707 | 458 | 307 | 5 | 19 | 431 | 22 | 477 | 9.45e-27 | 112 |
| Msa0988510 | AT4G23030.1 | 25.234 | 428 | 279 | 7 | 59 | 447 | 59 | 484 | 3.06e-25 | 108 |
| Msa0988510 | AT4G22790.1 | 24.675 | 462 | 275 | 13 | 38 | 443 | 32 | 476 | 1.35e-22 | 100 |
| Msa0988510 | AT2G04066.1 | 29.787 | 141 | 97 | 1 | 303 | 443 | 30 | 168 | 3.72e-22 | 93.6 |
| Msa0988510 | AT5G49130.1 | 20.751 | 453 | 300 | 8 | 31 | 428 | 25 | 473 | 4.62e-21 | 95.9 |
| Msa0988510 | AT1G15180.2 | 26.642 | 274 | 162 | 5 | 125 | 360 | 8 | 280 | 5.28e-18 | 86.3 |
Find 143 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTACCATCGTTAAACTTTA+TGG | 0.112040 | 6_4:+42422294 | None:intergenic |
| TACTATCTATTTCTCTATTT+TGG | 0.115781 | 6_4:-42426629 | Msa0988510:intron |
| GATTTGAAATTCTCAGTTTC+TGG | 0.147984 | 6_4:-42422646 | Msa0988510:exon |
| GATTGTCTTGGATGGCATTT+AGG | 0.156838 | 6_4:-42425360 | Msa0988510:CDS |
| CGGCAATATTCTTCAGATTT+TGG | 0.172137 | 6_4:-42423053 | Msa0988510:CDS |
| TTCATTAGTTATAGAGAAAA+TGG | 0.172587 | 6_4:-42422474 | Msa0988510:three_prime_UTR |
| TATGGTTGGTTACATAAATT+TGG | 0.175731 | 6_4:-42423883 | Msa0988510:CDS |
| CTTGGTTTCAACCAGCATTT+AGG | 0.184697 | 6_4:-42423822 | Msa0988510:CDS |
| GGATGGCATTTAGGGAATTA+TGG | 0.195593 | 6_4:-42425351 | Msa0988510:CDS |
| GAATTTCATCTGAAACTTAT+AGG | 0.233106 | 6_4:-42422551 | Msa0988510:three_prime_UTR |
| CATCTGAAACTTATAGGAAT+TGG | 0.240227 | 6_4:-42422545 | Msa0988510:three_prime_UTR |
| ACTCTAATCTTAAAACTTCT+TGG | 0.251742 | 6_4:-42425682 | Msa0988510:CDS |
| AGAGTTGCATATAGATAAAT+TGG | 0.252782 | 6_4:+42425700 | None:intergenic |
| CGGCTAATCGCATGAGAATT+TGG | 0.262057 | 6_4:-42422695 | Msa0988510:CDS |
| ATTTATATAGGTGTGGTAAT+TGG | 0.266990 | 6_4:-42423921 | Msa0988510:intron |
| TATAAGAAAGTGAGTCTTAT+TGG | 0.270077 | 6_4:-42426922 | Msa0988510:five_prime_UTR |
| TACATTGTTGGACTCCCTAT+TGG | 0.286240 | 6_4:-42423852 | Msa0988510:CDS |
| TCCATCTATGCTGGTCATAT+TGG | 0.288387 | 6_4:-42426697 | Msa0988510:CDS |
| ATAAAACATAATTACCTCTT+TGG | 0.290773 | 6_4:+42422997 | None:intergenic |
| TCCCCTTCCCAGACAGGTTT+GGG | 0.295087 | 6_4:-42422200 | Msa0988510:three_prime_UTR |
| AAGTTTCAGATGAAATTCTT+AGG | 0.303228 | 6_4:+42422556 | None:intergenic |
| TGGAACATGATGCTGCTTCT+TGG | 0.303911 | 6_4:-42424877 | Msa0988510:CDS |
| CTTTACCAACAATGATGATA+TGG | 0.306168 | 6_4:-42424152 | Msa0988510:CDS |
| GCTTGCATTATCCTTCTTGC+TGG | 0.308510 | 6_4:-42425268 | Msa0988510:CDS |
| CTTCATCAGTGTATTTGATT+GGG | 0.322121 | 6_4:-42425482 | Msa0988510:CDS |
| ATCATTGTTGGTAAAGATAA+AGG | 0.331302 | 6_4:+42424159 | None:intergenic |
| GATGGCATTTAGGGAATTAT+GGG | 0.335429 | 6_4:-42425350 | Msa0988510:CDS |
| TCTTCATCAGTGTATTTGAT+TGG | 0.340775 | 6_4:-42425483 | Msa0988510:CDS |
| TCCAATATGACCAGCATAGA+TGG | 0.341144 | 6_4:+42426696 | None:intergenic |
| AGTATTTCACAAACTATATC+AGG | 0.341370 | 6_4:-42424076 | Msa0988510:intron |
| GCATTACAATGGGGTGCAAT+TGG | 0.341543 | 6_4:-42422238 | Msa0988510:three_prime_UTR |
| TTCCCCTTCCCAGACAGGTT+TGG | 0.342859 | 6_4:-42422201 | Msa0988510:three_prime_UTR |
| ATTGTCTTGGATGGCATTTA+GGG | 0.356470 | 6_4:-42425359 | Msa0988510:CDS |
| ATCTGAAACTTATAGGAATT+GGG | 0.360635 | 6_4:-42422544 | Msa0988510:three_prime_UTR |
| ACACTATGTGGCCAAGCTTA+TGG | 0.367252 | 6_4:-42425802 | Msa0988510:CDS |
| GAATTTACTAAGCTAAGTTT+TGG | 0.370077 | 6_4:-42425328 | Msa0988510:CDS |
| AGTGAATTAGCATACCTTCT+TGG | 0.371972 | 6_4:-42424118 | Msa0988510:CDS |
| AAAGTTGAATCTCACTCATA+TGG | 0.374748 | 6_4:-42426887 | Msa0988510:exon |
| CGGGGATACCCAAACCTGTC+TGG | 0.375585 | 6_4:+42422192 | None:intergenic |
| TTGGTTTCAACCAGCATTTA+GGG | 0.380303 | 6_4:-42423821 | Msa0988510:CDS |
| GTATTTGATTGGGGAATGAT+AGG | 0.382555 | 6_4:-42425472 | Msa0988510:CDS |
| TTGGCATGCTATTACATTGT+TGG | 0.389393 | 6_4:-42423864 | Msa0988510:CDS |
| AAACCAAGGAAAATTCCAAT+AGG | 0.410570 | 6_4:+42423837 | None:intergenic |
| GAATTGGGTGATTAGAAGTA+GGG | 0.411142 | 6_4:-42422529 | Msa0988510:three_prime_UTR |
| CGTGGTCTTGGTTGTTGCTT+GGG | 0.411448 | 6_4:-42426967 | Msa0988510:five_prime_UTR |
| TTATGCATCCGAGATCAAAC+TGG | 0.413945 | 6_4:+42422266 | None:intergenic |
| CATAAAGTAGGCATTACAAT+GGG | 0.417454 | 6_4:-42422248 | Msa0988510:three_prime_UTR |
| AAAGAGATAGCCGATCTTGC+CGG | 0.440212 | 6_4:-42425652 | Msa0988510:CDS |
| TCATTATTTATAAGACCAAC+TGG | 0.443175 | 6_4:-42423021 | Msa0988510:CDS |
| TACGTTTCCCCTTCCCAGAC+AGG | 0.446396 | 6_4:-42422206 | Msa0988510:three_prime_UTR |
| GGAATTGGGTGATTAGAAGT+AGG | 0.453215 | 6_4:-42422530 | Msa0988510:three_prime_UTR |
| GGAATGAGACATTGAAGATA+TGG | 0.454071 | 6_4:-42426780 | Msa0988510:CDS |
| CATTACAATGGGGTGCAATT+GGG | 0.457665 | 6_4:-42422237 | Msa0988510:three_prime_UTR |
| ACGAAATTCTAGCCCGTGCT+TGG | 0.457987 | 6_4:+42422410 | None:intergenic |
| GATAATCCTGTCATTGCTGT+TGG | 0.465528 | 6_4:-42425238 | Msa0988510:intron |
| GCAGGAAAATTTCAAAATGC+TGG | 0.468904 | 6_4:-42425778 | Msa0988510:CDS |
| ACGTGGTCTTGGTTGTTGCT+TGG | 0.477217 | 6_4:-42426968 | Msa0988510:five_prime_UTR |
| ATGTCTCAGTCTCTTCTCAT+TGG | 0.479393 | 6_4:-42424226 | Msa0988510:intron |
| TTCTAGCCCGTGCTTGGCAC+GGG | 0.482163 | 6_4:+42422416 | None:intergenic |
| GTGAGTCTTATTGGTATATG+TGG | 0.483504 | 6_4:-42426913 | Msa0988510:five_prime_UTR |
| TGTGGGGATGAGGATGCGAC+GGG | 0.484726 | 6_4:+42422173 | None:intergenic |
| ATGTACCATATCATCATTGT+TGG | 0.488414 | 6_4:+42424147 | None:intergenic |
| AACCAAGGAAAATTCCAATA+GGG | 0.490049 | 6_4:+42423838 | None:intergenic |
| CAATATCTACCACGTGGTCT+TGG | 0.492822 | 6_4:-42426979 | None:intergenic |
| ATGCTGGTATTTATCTTCAA+AGG | 0.493117 | 6_4:-42425762 | Msa0988510:CDS |
| TGGATGTGGATGGCAAGTTA+TGG | 0.499825 | 6_4:-42423901 | Msa0988510:CDS |
| ATTCTAGCCCGTGCTTGGCA+CGG | 0.506048 | 6_4:+42422415 | None:intergenic |
| CAACCAGCATTTAGGGGTCA+AGG | 0.506365 | 6_4:-42423814 | Msa0988510:intron |
| TTAGAGTCACATTAGAGCTA+TGG | 0.514239 | 6_4:-42422581 | Msa0988510:three_prime_UTR |
| TACCCAAACCTGTCTGGGAA+GGG | 0.515703 | 6_4:+42422198 | None:intergenic |
| ACCATAGCCCAGTTTGATCT+CGG | 0.519479 | 6_4:-42422274 | Msa0988510:three_prime_UTR |
| ATACCCAAACCTGTCTGGGA+AGG | 0.519502 | 6_4:+42422197 | None:intergenic |
| AATTACCTCTTTGGTCCAGT+TGG | 0.521889 | 6_4:+42423006 | None:intergenic |
| AAGGATGGAATGGATTGTCT+TGG | 0.523770 | 6_4:-42425372 | Msa0988510:CDS |
| GTATTTATCTTCAAAGGTCA+CGG | 0.523993 | 6_4:-42425756 | Msa0988510:CDS |
| TCCGAGATCAAACTGGGCTA+TGG | 0.524992 | 6_4:+42422273 | None:intergenic |
| TTGGAGTAAGTTCCGCAGTA+AGG | 0.525082 | 6_4:-42424858 | Msa0988510:intron |
| TGTTATTATGTACATAGCAA+TGG | 0.525747 | 6_4:-42425539 | Msa0988510:CDS |
| TGTGGCCAAGCTTATGGTGC+AGG | 0.527728 | 6_4:-42425796 | Msa0988510:CDS |
| GCAATGGCAAGTAATATCTC+AGG | 0.528753 | 6_4:-42425445 | Msa0988510:CDS |
| CATGTAGGGAATTAGTAGAA+TGG | 0.533759 | 6_4:+42425621 | None:intergenic |
| ATGATTGCAGGTAGAGCAAA+CGG | 0.534109 | 6_4:-42422715 | Msa0988510:intron |
| TTCATCAGTGTATTTGATTG+GGG | 0.536727 | 6_4:-42425481 | Msa0988510:CDS |
| ACCCAAACCTGTCTGGGAAG+GGG | 0.537600 | 6_4:+42422199 | None:intergenic |
| TCTTCAAATTCCATCTATGC+TGG | 0.537679 | 6_4:-42426706 | Msa0988510:CDS |
| TAACCATTGTTATACCAAGA+AGG | 0.539016 | 6_4:+42424104 | None:intergenic |
| GCCATTGGTTGGTGCAAAGA+AGG | 0.541599 | 6_4:-42425391 | Msa0988510:CDS |
| CTTCACGAGAGGCAAATTGA+CGG | 0.542556 | 6_4:+42425588 | None:intergenic |
| CACTCATATGGAAACACCAT+TGG | 0.544478 | 6_4:-42426875 | Msa0988510:exon |
| AATGATTCACTGTGGGGATG+AGG | 0.546798 | 6_4:+42422163 | None:intergenic |
| GGGGATACCCAAACCTGTCT+GGG | 0.547957 | 6_4:+42422193 | None:intergenic |
| ATAGGTGTGGTAATTGGATG+TGG | 0.550106 | 6_4:-42423915 | Msa0988510:intron |
| GTGCACATGCATAGTCACTT+TGG | 0.550525 | 6_4:-42422614 | Msa0988510:three_prime_UTR |
| TTGGCTTAGGGTCTATGGGG+AGG | 0.550606 | 6_4:-42423085 | Msa0988510:intron |
| TAGTGACCCGTGCCAAGCAC+GGG | 0.552322 | 6_4:-42422422 | Msa0988510:three_prime_UTR |
| TGGTGCAAAGAAGGATGGAA+TGG | 0.560126 | 6_4:-42425382 | Msa0988510:CDS |
| TAATGAAGAATTAAGACTGA+GGG | 0.560531 | 6_4:+42422490 | None:intergenic |
| CTGTGGGGATGAGGATGCGA+CGG | 0.560774 | 6_4:+42422172 | None:intergenic |
| TCCTTCTTTGCACCAACCAA+TGG | 0.566269 | 6_4:+42425390 | None:intergenic |
| AAGGAACCAACAGCAATGAC+AGG | 0.568244 | 6_4:+42425232 | None:intergenic |
| AAAAGTAAAGACAAAGCCAC+TGG | 0.570960 | 6_4:+42426745 | None:intergenic |
| CTAAATGCTGGTTGAAACCA+AGG | 0.575956 | 6_4:+42423823 | None:intergenic |
| TGATCTCGGATGCATAAAGT+AGG | 0.577389 | 6_4:-42422260 | Msa0988510:three_prime_UTR |
| GCATTGGTAATATATGCCAT+TGG | 0.580938 | 6_4:-42425406 | Msa0988510:CDS |
| TTGGTTGGTGCAAAGAAGGA+TGG | 0.580974 | 6_4:-42425387 | Msa0988510:CDS |
| ATACCTTGACCCCTAAATGC+TGG | 0.585343 | 6_4:+42423811 | None:intergenic |
| TGTGGATGGCAAGTTATGGT+TGG | 0.586186 | 6_4:-42423897 | Msa0988510:CDS |
| GACGGCGAAGGAAAACATGT+AGG | 0.589287 | 6_4:+42425606 | None:intergenic |
| TGGAATTTGAAGAGCCAATG+AGG | 0.590690 | 6_4:+42426716 | None:intergenic |
| ACGGCGAAGGAAAACATGTA+GGG | 0.600604 | 6_4:+42425607 | None:intergenic |
| ATAGTGACCCGTGCCAAGCA+CGG | 0.602381 | 6_4:-42422423 | Msa0988510:three_prime_UTR |
| TATCAAGATGACCAGCAAGA+AGG | 0.603608 | 6_4:+42425257 | None:intergenic |
| CATATAGATAAATTGGCAAG+AGG | 0.606586 | 6_4:+42425707 | None:intergenic |
| ATACCTTCTTGGTATAACAA+TGG | 0.609585 | 6_4:-42424107 | Msa0988510:CDS |
| GGGAATGATAGGTTTAGCAA+TGG | 0.621656 | 6_4:-42425461 | Msa0988510:CDS |
| TAATGATCTGTTTAGAACAA+TGG | 0.623142 | 6_4:-42425297 | Msa0988510:CDS |
| TGGTAATATATGCCATTGGT+TGG | 0.623259 | 6_4:-42425402 | Msa0988510:CDS |
| ATGGAATGGATTGTCTTGGA+TGG | 0.624219 | 6_4:-42425368 | Msa0988510:CDS |
| TATGCATCCGAGATCAAACT+GGG | 0.629598 | 6_4:+42422267 | None:intergenic |
| AATGCACTAGCAACACTATG+TGG | 0.632641 | 6_4:-42425814 | Msa0988510:CDS |
| GCATAAAGTAGGCATTACAA+TGG | 0.632981 | 6_4:-42422249 | Msa0988510:three_prime_UTR |
| TGGTTTCAACCAGCATTTAG+GGG | 0.633107 | 6_4:-42423820 | Msa0988510:CDS |
| GTGTGGTAATTGGATGTGGA+TGG | 0.640076 | 6_4:-42423911 | Msa0988510:CDS |
| TAGTTATAGAGAAAATGGAA+AGG | 0.641926 | 6_4:-42422469 | Msa0988510:three_prime_UTR |
| GAGAGGCAAATTGACGGCGA+AGG | 0.648088 | 6_4:+42425594 | None:intergenic |
| CTAATGAAGAATTAAGACTG+AGG | 0.648310 | 6_4:+42422489 | None:intergenic |
| TGGCAAGAGGAATATACAAG+TGG | 0.649814 | 6_4:+42425720 | None:intergenic |
| CTTTATGGAGGAGTCAACAC+TGG | 0.652964 | 6_4:+42422309 | None:intergenic |
| ACCATCGTTAAACTTTATGG+AGG | 0.653613 | 6_4:+42422297 | None:intergenic |
| ATGAAGAATTAAGACTGAGG+GGG | 0.657370 | 6_4:+42422492 | None:intergenic |
| GCTTGAAGAAACTTCACGAG+AGG | 0.663335 | 6_4:+42425577 | None:intergenic |
| CTATGGGGAGGAACAATGTG+CGG | 0.665533 | 6_4:-42423073 | Msa0988510:CDS |
| AATTGGGTGATTAGAAGTAG+GGG | 0.666674 | 6_4:-42422528 | Msa0988510:three_prime_UTR |
| TGGCAAGTAATATCTCAGGA+TGG | 0.670260 | 6_4:-42425441 | Msa0988510:CDS |
| TAAGACCAACTGGACCAAAG+AGG | 0.670533 | 6_4:-42423011 | Msa0988510:intron |
| AATGAAGAATTAAGACTGAG+GGG | 0.682653 | 6_4:+42422491 | None:intergenic |
| TCCTCCATAAAGTTTAACGA+TGG | 0.686192 | 6_4:-42422298 | Msa0988510:three_prime_UTR |
| TATAGTCACTCACCTTACTG+CGG | 0.692620 | 6_4:+42424846 | None:intergenic |
| ATGGAAGATAGCAATTCCAG+TGG | 0.702945 | 6_4:-42426761 | Msa0988510:CDS |
| GTGGGGATGAGGATGCGACG+GGG | 0.718619 | 6_4:+42422174 | None:intergenic |
| AAGCAACAACCAAGACCACG+TGG | 0.735299 | 6_4:+42426970 | None:intergenic |
| ATAAAGTAGGCATTACAATG+GGG | 0.757583 | 6_4:-42422247 | Msa0988510:three_prime_UTR |
| ATAATACAATATCTACCACG+TGG | 0.806598 | 6_4:-42426985 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAAAAAGCTTAATT+TGG | + | chr6_4:42422558-42422577 | None:intergenic | 10.0% |
| !!! | TTCTTTTTAATTTTCTTTTT+TGG | + | chr6_4:42424746-42424765 | None:intergenic | 10.0% |
| !! | ATTAAAAAGAAATTAAAACT+AGG | - | chr6_4:42424755-42424774 | Msa0988510:intron | 10.0% |
| !!! | TTACAAATTTACATATTTTT+TGG | - | chr6_4:42426028-42426047 | Msa0988510:intron | 10.0% |
| !! | CAATTACTAATTATTGAATT+TGG | + | chr6_4:42422622-42422641 | None:intergenic | 15.0% |
| !! | AATTCAATAATTAGTAATTG+TGG | - | chr6_4:42422622-42422641 | Msa0988510:three_prime_UTR | 15.0% |
| !!! | ATTATAGCTTTTAGTTTATA+AGG | - | chr6_4:42422915-42422934 | Msa0988510:intron | 15.0% |
| !! | TTCAATTTAATTATAAGTGT+CGG | + | chr6_4:42424030-42424049 | None:intergenic | 15.0% |
| !! | TTACATAAAGTCAAATTTAT+AGG | + | chr6_4:42424358-42424377 | None:intergenic | 15.0% |
| !!! | TATAAATTTGACTTTATGTA+AGG | - | chr6_4:42424357-42424376 | Msa0988510:intron | 15.0% |
| !!! | TAAACATAAGAACTTTTTTT+TGG | + | chr6_4:42425916-42425935 | None:intergenic | 15.0% |
| !! | ATATGTAAATTTGTAAGAAA+AGG | + | chr6_4:42426024-42426043 | None:intergenic | 15.0% |
| !!! | TTTTAAAAAGGAAAAAATCT+TGG | + | chr6_4:42426170-42426189 | None:intergenic | 15.0% |
| !!! | TTTCCTTTTTAAAAAAACAA+AGG | - | chr6_4:42426176-42426195 | Msa0988510:intron | 15.0% |
| !!! | TTCCTTTTTAAAAAAACAAA+GGG | - | chr6_4:42426177-42426196 | Msa0988510:intron | 15.0% |
| !!! | TACTATCTATTTCTCTATTT+TGG | - | chr6_4:42422503-42422522 | Msa0988510:three_prime_UTR | 20.0% |
| !!! | TAAGTTCATGTTTGAAATAA+TGG | - | chr6_4:42422657-42422676 | Msa0988510:exon | 20.0% |
| !!! | TAATATATAAGCTAGTTTCT+TGG | + | chr6_4:42422899-42422918 | None:intergenic | 20.0% |
| !! | ATAAACTCACAATAAAAAGA+TGG | + | chr6_4:42422971-42422990 | None:intergenic | 20.0% |
| !! | GTTCATCATATAATAATAAC+GGG | + | chr6_4:42423131-42423150 | None:intergenic | 20.0% |
| !! | CGTTCATCATATAATAATAA+CGG | + | chr6_4:42423132-42423151 | None:intergenic | 20.0% |
| !! | TTATTCTTACCAAATTGAAA+AGG | + | chr6_4:42423922-42423941 | None:intergenic | 20.0% |
| !!! | TATTTTTAGCCTTAATATTC+AGG | - | chr6_4:42424230-42424249 | Msa0988510:intron | 20.0% |
| !!! | ATTTTTAGCCTTAATATTCA+GGG | - | chr6_4:42424231-42424250 | Msa0988510:intron | 20.0% |
| !! | ACATAATTTAGTGTAATCAT+AGG | - | chr6_4:42424488-42424507 | Msa0988510:intron | 20.0% |
| !! | TGGTTATATGTCTATTTATT+AGG | - | chr6_4:42425397-42425416 | Msa0988510:CDS | 20.0% |
| !! | ATGAGTTCAATATTACAATT+TGG | + | chr6_4:42425626-42425645 | None:intergenic | 20.0% |
| !! | AACTTATCTACTATTAATGT+GGG | - | chr6_4:42425701-42425720 | Msa0988510:CDS | 20.0% |
| !! | AATTAGAACATAACATTCTT+CGG | + | chr6_4:42425815-42425834 | None:intergenic | 20.0% |
| !!! | ACTTTTTTTTGGTAGATAAA+TGG | + | chr6_4:42425905-42425924 | None:intergenic | 20.0% |
| !! | AAGGAAATCATAATATAAGT+TGG | + | chr6_4:42426005-42426024 | None:intergenic | 20.0% |
| !!! | ATTTACATATTTTTTGGCTT+AGG | - | chr6_4:42426034-42426053 | Msa0988510:intron | 20.0% |
| !!! | TTTACATATTTTTTGGCTTA+GGG | - | chr6_4:42426035-42426054 | Msa0988510:intron | 20.0% |
| !! | ATAAAACATAATTACCTCTT+TGG | + | chr6_4:42426138-42426157 | None:intergenic | 20.0% |
| !!! | AACCCTTTGTTTTTTTAAAA+AGG | + | chr6_4:42426182-42426201 | None:intergenic | 20.0% |
| !! | TTAAAAGTAGAGATTAAAAG+TGG | + | chr6_4:42426299-42426318 | None:intergenic | 20.0% |
| !!! | AGAATTTGTTAACATTTTCA+TGG | - | chr6_4:42426383-42426402 | Msa0988510:intron | 20.0% |
| !! | TTCATTAGTTATAGAGAAAA+TGG | - | chr6_4:42426658-42426677 | Msa0988510:CDS | 20.0% |
| !! | TATAAGAAAGTGAGTCTTAT+TGG | - | chr6_4:42422210-42422229 | Msa0988510:three_prime_UTR | 25.0% |
| !!! | ACATCTTTCAAGTTTTTCAA+AGG | + | chr6_4:42422318-42422337 | None:intergenic | 25.0% |
| !! | AAGATGTGAAATATGTTTTG+TGG | - | chr6_4:42422331-42422350 | Msa0988510:three_prime_UTR | 25.0% |
| !! | AACTTTTGTCAAAATCACAT+TGG | - | chr6_4:42422732-42422751 | Msa0988510:intron | 25.0% |
| ! | AGAGTTGCATATAGATAAAT+TGG | + | chr6_4:42423435-42423454 | None:intergenic | 25.0% |
| ! | ACTCTAATCTTAAAACTTCT+TGG | - | chr6_4:42423450-42423469 | Msa0988510:intron | 25.0% |
| ! | TGTTATTATGTACATAGCAA+TGG | - | chr6_4:42423593-42423612 | Msa0988510:intron | 25.0% |
| !! | ATGGATATTTTCTATTGCAT+TGG | - | chr6_4:42423710-42423729 | Msa0988510:intron | 25.0% |
| !! | GAATTTACTAAGCTAAGTTT+TGG | - | chr6_4:42423804-42423823 | Msa0988510:intron | 25.0% |
| !! | TAATGATCTGTTTAGAACAA+TGG | - | chr6_4:42423835-42423854 | Msa0988510:CDS | 25.0% |
| ! | TTCTCAAATTATTATCGATG+TGG | - | chr6_4:42424058-42424077 | Msa0988510:intron | 25.0% |
| ! | AAATTATGAAGAAAGCAAGA+AGG | + | chr6_4:42424199-42424218 | None:intergenic | 25.0% |
| ! | TTATGTAAGGAATTGAAATC+TGG | - | chr6_4:42424370-42424389 | Msa0988510:intron | 25.0% |
| ! | TCTCAAATTATTATCAGTGT+CGG | + | chr6_4:42424463-42424482 | None:intergenic | 25.0% |
| !! | GTTTAGTTTAATTCAGTCTT+AGG | + | chr6_4:42424713-42424732 | None:intergenic | 25.0% |
| !! | ATCATTGTTGGTAAAGATAA+AGG | + | chr6_4:42424976-42424995 | None:intergenic | 25.0% |
| ! | AGTATTTCACAAACTATATC+AGG | - | chr6_4:42425056-42425075 | Msa0988510:intron | 25.0% |
| !! | GGTTATAGTTTATTTGCTTT+TGG | - | chr6_4:42425077-42425096 | Msa0988510:intron | 25.0% |
| !!! | AAGAAGTTCGATTTTGAAAA+CGG | + | chr6_4:42425187-42425206 | None:intergenic | 25.0% |
| ! | AACTTCTTGGACATTTATAT+AGG | - | chr6_4:42425199-42425218 | Msa0988510:intron | 25.0% |
| ! | ATTTATATAGGTGTGGTAAT+TGG | - | chr6_4:42425211-42425230 | Msa0988510:intron | 25.0% |
| !! | TATGGTTGGTTACATAAATT+TGG | - | chr6_4:42425249-42425268 | Msa0988510:CDS | 25.0% |
| ! | GACACTCTTTACATTATAAA+TGG | + | chr6_4:42425457-42425476 | None:intergenic | 25.0% |
| ! | GAACTTATCTACTATTAATG+TGG | - | chr6_4:42425700-42425719 | Msa0988510:CDS | 25.0% |
| ! | AAATCTCTTTCAGCTTAAAT+AGG | - | chr6_4:42425773-42425792 | Msa0988510:CDS | 25.0% |
| ! | GTAGATAAATGGTACAAAAT+AGG | + | chr6_4:42425894-42425913 | None:intergenic | 25.0% |
| ! | TCATTATTTATAAGACCAAC+TGG | - | chr6_4:42426111-42426130 | Msa0988510:intron | 25.0% |
| ! | TTATACAGATTGAAAATCGA+AGG | + | chr6_4:42426264-42426283 | None:intergenic | 25.0% |
| !! | TTCGACTTGTAAAAATATGA+AGG | + | chr6_4:42426338-42426357 | None:intergenic | 25.0% |
| ! | AAGTTTCAGATGAAATTCTT+AGG | + | chr6_4:42426579-42426598 | None:intergenic | 25.0% |
| !! | GAATTTCATCTGAAACTTAT+AGG | - | chr6_4:42426581-42426600 | Msa0988510:intron | 25.0% |
| !! | ATCTGAAACTTATAGGAATT+GGG | - | chr6_4:42426588-42426607 | Msa0988510:intron | 25.0% |
| ! | TAATGAAGAATTAAGACTGA+GGG | + | chr6_4:42426645-42426664 | None:intergenic | 25.0% |
| ! | TAGTTATAGAGAAAATGGAA+AGG | - | chr6_4:42426663-42426682 | Msa0988510:CDS | 25.0% |
| AAAGTTGAATCTCACTCATA+TGG | - | chr6_4:42422245-42422264 | Msa0988510:three_prime_UTR | 30.0% | |
| ! | GTAAAGCTTTTATTCACCAA+TGG | + | chr6_4:42422276-42422295 | None:intergenic | 30.0% |
| !!! | TTACTTTTTCAGAACCTCAT+TGG | - | chr6_4:42422402-42422421 | Msa0988510:three_prime_UTR | 30.0% |
| ATGAATGAGAGTGATAAGAA+AGG | + | chr6_4:42422535-42422554 | None:intergenic | 30.0% | |
| ATCAAAAGCAATTTAAGCTC+TGG | - | chr6_4:42422864-42422883 | Msa0988510:intron | 30.0% | |
| !!! | TTTTAGTTTATAAGGTCGTC+TGG | - | chr6_4:42422923-42422942 | Msa0988510:intron | 30.0% |
| !!! | AGTCTTTTTAAAACAGTGTC+AGG | + | chr6_4:42423004-42423023 | None:intergenic | 30.0% |
| ! | AATTTGTTTAGTGAGCGTAA+GGG | - | chr6_4:42423035-42423054 | Msa0988510:CDS | 30.0% |
| TGTGTCATATAAGAGACTTT+AGG | - | chr6_4:42423088-42423107 | Msa0988510:intron | 30.0% | |
| TCTCAACTCATACAACTAAA+CGG | + | chr6_4:42423173-42423192 | None:intergenic | 30.0% | |
| TCACATGTAAAATTGCAGTA+TGG | - | chr6_4:42423288-42423307 | Msa0988510:intron | 30.0% | |
| ATGCTGGTATTTATCTTCAA+AGG | - | chr6_4:42423370-42423389 | Msa0988510:intron | 30.0% | |
| GTATTTATCTTCAAAGGTCA+CGG | - | chr6_4:42423376-42423395 | Msa0988510:intron | 30.0% | |
| CATATAGATAAATTGGCAAG+AGG | + | chr6_4:42423428-42423447 | None:intergenic | 30.0% | |
| ! | TAGTAGAATGGCATATTTTC+CGG | + | chr6_4:42423502-42423521 | None:intergenic | 30.0% |
| TCTTCATCAGTGTATTTGAT+TGG | - | chr6_4:42423649-42423668 | Msa0988510:intron | 30.0% | |
| CTTCATCAGTGTATTTGATT+GGG | - | chr6_4:42423650-42423669 | Msa0988510:intron | 30.0% | |
| TTCATCAGTGTATTTGATTG+GGG | - | chr6_4:42423651-42423670 | Msa0988510:intron | 30.0% | |
| CTTTACCAACAATGATGATA+TGG | - | chr6_4:42424980-42424999 | Msa0988510:intron | 30.0% | |
| ATGTACCATATCATCATTGT+TGG | + | chr6_4:42424988-42425007 | None:intergenic | 30.0% | |
| ATACCTTCTTGGTATAACAA+TGG | - | chr6_4:42425025-42425044 | Msa0988510:intron | 30.0% | |
| TAACCATTGTTATACCAAGA+AGG | + | chr6_4:42425031-42425050 | None:intergenic | 30.0% | |
| GTTACTCTGGTAAAATAAAG+GGG | + | chr6_4:42425151-42425170 | None:intergenic | 30.0% | |
| CGTTACTCTGGTAAAATAAA+GGG | + | chr6_4:42425152-42425171 | None:intergenic | 30.0% | |
| TCGTTACTCTGGTAAAATAA+AGG | + | chr6_4:42425153-42425172 | None:intergenic | 30.0% | |
| ! | GTTTTCAAAATCGAACTTCT+TGG | - | chr6_4:42425186-42425205 | Msa0988510:intron | 30.0% |
| AACCAAGGAAAATTCCAATA+GGG | + | chr6_4:42425297-42425316 | None:intergenic | 30.0% | |
| AAACCAAGGAAAATTCCAAT+AGG | + | chr6_4:42425298-42425317 | None:intergenic | 30.0% | |
| ! | CCAACTTCATTGATGATTTA+GGG | + | chr6_4:42425380-42425399 | None:intergenic | 30.0% |
| ! | ACCAACTTCATTGATGATTT+AGG | + | chr6_4:42425381-42425400 | None:intergenic | 30.0% |
| ! | GTGTTATTGATTATGATTGC+AGG | - | chr6_4:42426405-42426424 | Msa0988510:intron | 30.0% |
| ! | TTCAAATCACATCGTTTTGA+AGG | + | chr6_4:42426474-42426493 | None:intergenic | 30.0% |
| ! | GATTTGAAATTCTCAGTTTC+TGG | - | chr6_4:42426486-42426505 | Msa0988510:intron | 30.0% |
| ! | CATCTGAAACTTATAGGAAT+TGG | - | chr6_4:42426587-42426606 | Msa0988510:intron | 30.0% |
| AATGAAGAATTAAGACTGAG+GGG | + | chr6_4:42426644-42426663 | None:intergenic | 30.0% | |
| CTAATGAAGAATTAAGACTG+AGG | + | chr6_4:42426646-42426665 | None:intergenic | 30.0% | |
| CATAAAGTAGGCATTACAAT+GGG | - | chr6_4:42426884-42426903 | Msa0988510:exon | 30.0% | |
| ATAAAGTAGGCATTACAATG+GGG | - | chr6_4:42426885-42426904 | Msa0988510:exon | 30.0% | |
| !! | GTGAGTCTTATTGGTATATG+TGG | - | chr6_4:42422219-42422238 | Msa0988510:three_prime_UTR | 35.0% |
| GGAATGAGACATTGAAGATA+TGG | - | chr6_4:42422352-42422371 | Msa0988510:three_prime_UTR | 35.0% | |
| AAAAGTAAAGACAAAGCCAC+TGG | + | chr6_4:42422390-42422409 | None:intergenic | 35.0% | |
| TCTTCAAATTCCATCTATGC+TGG | - | chr6_4:42422426-42422445 | Msa0988510:three_prime_UTR | 35.0% | |
| ! | TTGTCAAAATCACATTGGCT+AGG | - | chr6_4:42422737-42422756 | Msa0988510:intron | 35.0% |
| ! | CAATTTGTTTAGTGAGCGTA+AGG | - | chr6_4:42423034-42423053 | Msa0988510:CDS | 35.0% |
| ! | CATATAAGAGACTTTAGGAG+AGG | - | chr6_4:42423093-42423112 | Msa0988510:intron | 35.0% |
| ! | ATGAACGAACTAGTTCTTGA+AGG | - | chr6_4:42423145-42423164 | Msa0988510:intron | 35.0% |
| !! | ATGCAGAAGGAGTATTAAGA+AGG | - | chr6_4:42423192-42423211 | Msa0988510:intron | 35.0% |
| GCAGGAAAATTTCAAAATGC+TGG | - | chr6_4:42423354-42423373 | Msa0988510:intron | 35.0% | |
| CATGTAGGGAATTAGTAGAA+TGG | + | chr6_4:42423514-42423533 | None:intergenic | 35.0% | |
| GTATTTGATTGGGGAATGAT+AGG | - | chr6_4:42423660-42423679 | Msa0988510:intron | 35.0% | |
| ! | GCATTGGTAATATATGCCAT+TGG | - | chr6_4:42423726-42423745 | Msa0988510:intron | 35.0% |
| TGGTAATATATGCCATTGGT+TGG | - | chr6_4:42423730-42423749 | Msa0988510:intron | 35.0% | |
| ATTGTCTTGGATGGCATTTA+GGG | - | chr6_4:42423773-42423792 | Msa0988510:intron | 35.0% | |
| GATGGCATTTAGGGAATTAT+GGG | - | chr6_4:42423782-42423801 | Msa0988510:intron | 35.0% | |
| !!! | CTGTTGGTTCCTTTTCAATT+TGG | - | chr6_4:42423910-42423929 | Msa0988510:CDS | 35.0% |
| TACGAAACACATATACTCCT+CGG | - | chr6_4:42423952-42423971 | Msa0988510:intron | 35.0% | |
| TATGAAGAAAGCAAGAAGGA+AGG | + | chr6_4:42424195-42424214 | None:intergenic | 35.0% | |
| !! | TTAGCCTTAATATTCAGGGT+TGG | - | chr6_4:42424235-42424254 | Msa0988510:intron | 35.0% |
| TGTTCCAACCCTGAATATTA+AGG | + | chr6_4:42424242-42424261 | None:intergenic | 35.0% | |
| ! | TGTAATCATAGGTATCGTGT+CGG | - | chr6_4:42424499-42424518 | Msa0988510:intron | 35.0% |
| ! | AAAGACATTCCACTGATTAG+GGG | + | chr6_4:42424559-42424578 | None:intergenic | 35.0% |
| ! | CAAAGACATTCCACTGATTA+GGG | + | chr6_4:42424560-42424579 | None:intergenic | 35.0% |
| GTTCGTGTCTCTAATACAAT+TGG | - | chr6_4:42424840-42424859 | Msa0988510:intron | 35.0% | |
| !! | AAAGAGTATTTGGATGCTCT+TGG | + | chr6_4:42424876-42424895 | None:intergenic | 35.0% |
| AGCATCCAAATACTCTTTCT+TGG | - | chr6_4:42424878-42424897 | Msa0988510:CDS | 35.0% | |
| ATCCAAATACTCTTTCTTGG+TGG | - | chr6_4:42424881-42424900 | Msa0988510:CDS | 35.0% | |
| AGTGAATTAGCATACCTTCT+TGG | - | chr6_4:42425014-42425033 | Msa0988510:intron | 35.0% | |
| ! | AGTGACTATTTTCGTTACTC+TGG | + | chr6_4:42425164-42425183 | None:intergenic | 35.0% |
| CTTGGACATTTATATAGGTG+TGG | - | chr6_4:42425204-42425223 | Msa0988510:intron | 35.0% | |
| TTGGCATGCTATTACATTGT+TGG | - | chr6_4:42425268-42425287 | Msa0988510:CDS | 35.0% | |
| TTGGTTTCAACCAGCATTTA+GGG | - | chr6_4:42425311-42425330 | Msa0988510:CDS | 35.0% | |
| ! | ACTTCATTGATGATTTAGGG+AGG | + | chr6_4:42425377-42425396 | None:intergenic | 35.0% |
| CCCTAAATCATCAATGAAGT+TGG | - | chr6_4:42425377-42425396 | Msa0988510:CDS | 35.0% | |
| TCTTAACTGTTTCAACGTGA+TGG | - | chr6_4:42425500-42425519 | Msa0988510:CDS | 35.0% | |
| GGTACCAAATCCTATCATTT+CGG | + | chr6_4:42425605-42425624 | None:intergenic | 35.0% | |
| ! | TTTCATCTGAAATTCGAGGT+AGG | + | chr6_4:42425747-42425766 | None:intergenic | 35.0% |
| ! | GTCATTTCATCTGAAATTCG+AGG | + | chr6_4:42425751-42425770 | None:intergenic | 35.0% |
| ! | GTCTTTTACCAAACTATGAG+TGG | - | chr6_4:42425865-42425884 | Msa0988510:intron | 35.0% |
| CATTCTACATATACATTGCC+TGG | - | chr6_4:42425958-42425977 | Msa0988510:intron | 35.0% | |
| TTAAAACCATGATGCTTTCC+AGG | + | chr6_4:42425979-42425998 | None:intergenic | 35.0% | |
| !!! | ATTTTTTGGCTTAGGGTCTA+TGG | - | chr6_4:42426042-42426061 | Msa0988510:intron | 35.0% |
| !!! | TTTTTTGGCTTAGGGTCTAT+GGG | - | chr6_4:42426043-42426062 | Msa0988510:intron | 35.0% |
| ! | CGGCAATATTCTTCAGATTT+TGG | - | chr6_4:42426079-42426098 | Msa0988510:intron | 35.0% |
| TTAGAGTCACATTAGAGCTA+TGG | - | chr6_4:42426551-42426570 | Msa0988510:intron | 35.0% | |
| GAATTGGGTGATTAGAAGTA+GGG | - | chr6_4:42426603-42426622 | Msa0988510:intron | 35.0% | |
| AATTGGGTGATTAGAAGTAG+GGG | - | chr6_4:42426604-42426623 | Msa0988510:intron | 35.0% | |
| ATGAAGAATTAAGACTGAGG+GGG | + | chr6_4:42426643-42426662 | None:intergenic | 35.0% | |
| TCCTCCATAAAGTTTAACGA+TGG | - | chr6_4:42426834-42426853 | Msa0988510:CDS | 35.0% | |
| ACCATCGTTAAACTTTATGG+AGG | + | chr6_4:42426838-42426857 | None:intergenic | 35.0% | |
| GGTACCATCGTTAAACTTTA+TGG | + | chr6_4:42426841-42426860 | None:intergenic | 35.0% | |
| GCATAAAGTAGGCATTACAA+TGG | - | chr6_4:42426883-42426902 | Msa0988510:exon | 35.0% | |
| CACTCATATGGAAACACCAT+TGG | - | chr6_4:42422257-42422276 | Msa0988510:three_prime_UTR | 40.0% | |
| ATGGAAGATAGCAATTCCAG+TGG | - | chr6_4:42422371-42422390 | Msa0988510:three_prime_UTR | 40.0% | |
| TGGAATTTGAAGAGCCAATG+AGG | + | chr6_4:42422419-42422438 | None:intergenic | 40.0% | |
| TCCATCTATGCTGGTCATAT+TGG | - | chr6_4:42422435-42422454 | Msa0988510:three_prime_UTR | 40.0% | |
| TCCAATATGACCAGCATAGA+TGG | + | chr6_4:42422439-42422458 | None:intergenic | 40.0% | |
| ! | TGTATGAGTTGAGATGCAGA+AGG | - | chr6_4:42423179-42423198 | Msa0988510:intron | 40.0% |
| !! | CAGAAGGAGTATTAAGAAGG+AGG | - | chr6_4:42423195-42423214 | Msa0988510:intron | 40.0% |
| AATGCACTAGCAACACTATG+TGG | - | chr6_4:42423318-42423337 | Msa0988510:intron | 40.0% | |
| ! | ATTTTCCTGCACCATAAGCT+TGG | + | chr6_4:42423344-42423363 | None:intergenic | 40.0% |
| TGGCAAGAGGAATATACAAG+TGG | + | chr6_4:42423415-42423434 | None:intergenic | 40.0% | |
| GGGAATGATAGGTTTAGCAA+TGG | - | chr6_4:42423671-42423690 | Msa0988510:intron | 40.0% | |
| GCAATGGCAAGTAATATCTC+AGG | - | chr6_4:42423687-42423706 | Msa0988510:intron | 40.0% | |
| TGGCAAGTAATATCTCAGGA+TGG | - | chr6_4:42423691-42423710 | Msa0988510:intron | 40.0% | |
| !! | AAGGATGGAATGGATTGTCT+TGG | - | chr6_4:42423760-42423779 | Msa0988510:intron | 40.0% |
| !! | ATGGAATGGATTGTCTTGGA+TGG | - | chr6_4:42423764-42423783 | Msa0988510:intron | 40.0% |
| GATTGTCTTGGATGGCATTT+AGG | - | chr6_4:42423772-42423791 | Msa0988510:intron | 40.0% | |
| GGATGGCATTTAGGGAATTA+TGG | - | chr6_4:42423781-42423800 | Msa0988510:intron | 40.0% | |
| TATCAAGATGACCAGCAAGA+AGG | + | chr6_4:42423878-42423897 | None:intergenic | 40.0% | |
| GATAATCCTGTCATTGCTGT+TGG | - | chr6_4:42423894-42423913 | Msa0988510:CDS | 40.0% | |
| ACACATATACTCCTCGGATT+AGG | - | chr6_4:42423958-42423977 | Msa0988510:intron | 40.0% | |
| CAAGATAAGTATTCGACACC+AGG | + | chr6_4:42423989-42424008 | None:intergenic | 40.0% | |
| TATAGTCACTCACCTTACTG+CGG | + | chr6_4:42424289-42424308 | None:intergenic | 40.0% | |
| ATGAAGCACGAACATAGACA+CGG | - | chr6_4:42424406-42424425 | Msa0988510:intron | 40.0% | |
| ! | GCAAAGACATTCCACTGATT+AGG | + | chr6_4:42424561-42424580 | None:intergenic | 40.0% |
| TTTGTTCTATACACCAGCAC+AGG | - | chr6_4:42424609-42424628 | Msa0988510:intron | 40.0% | |
| ACTAACATGAAAACCTGTGC+TGG | + | chr6_4:42424625-42424644 | None:intergenic | 40.0% | |
| !! | TGCCACCAAGAAAGAGTATT+TGG | + | chr6_4:42424886-42424905 | None:intergenic | 40.0% |
| ATGTCTCAGTCTCTTCTCAT+TGG | - | chr6_4:42424906-42424925 | Msa0988510:intron | 40.0% | |
| ATAGGTGTGGTAATTGGATG+TGG | - | chr6_4:42425217-42425236 | Msa0988510:intron | 40.0% | |
| TACATTGTTGGACTCCCTAT+TGG | - | chr6_4:42425280-42425299 | Msa0988510:CDS | 40.0% | |
| ! | CTCCCTATTGGAATTTTCCT+TGG | - | chr6_4:42425292-42425311 | Msa0988510:CDS | 40.0% |
| ! | CTAAATGCTGGTTGAAACCA+AGG | + | chr6_4:42425312-42425331 | None:intergenic | 40.0% |
| CTTGGTTTCAACCAGCATTT+AGG | - | chr6_4:42425310-42425329 | Msa0988510:CDS | 40.0% | |
| TGGTTTCAACCAGCATTTAG+GGG | - | chr6_4:42425312-42425331 | Msa0988510:CDS | 40.0% | |
| CTCACACCTAGTCGTATTAT+AGG | - | chr6_4:42425550-42425569 | Msa0988510:CDS | 40.0% | |
| CTCAAGCCTATAATACGACT+AGG | + | chr6_4:42425559-42425578 | None:intergenic | 40.0% | |
| GGCTTGAGTGATTAATATGC+AGG | - | chr6_4:42425571-42425590 | Msa0988510:CDS | 40.0% | |
| GTGATTAATATGCAGGTCGT+TGG | - | chr6_4:42425578-42425597 | Msa0988510:CDS | 40.0% | |
| TGGTCCGAAATGATAGGATT+TGG | - | chr6_4:42425598-42425617 | Msa0988510:CDS | 40.0% | |
| !!! | TTTTTGGCTTAGGGTCTATG+GGG | - | chr6_4:42426044-42426063 | Msa0988510:intron | 40.0% |
| AATTACCTCTTTGGTCCAGT+TGG | + | chr6_4:42426129-42426148 | None:intergenic | 40.0% | |
| ATGATTGCAGGTAGAGCAAA+CGG | - | chr6_4:42426417-42426436 | Msa0988510:intron | 40.0% | |
| GGAATTGGGTGATTAGAAGT+AGG | - | chr6_4:42426602-42426621 | Msa0988510:intron | 40.0% | |
| TATGCATCCGAGATCAAACT+GGG | + | chr6_4:42426868-42426887 | None:intergenic | 40.0% | |
| TTATGCATCCGAGATCAAAC+TGG | + | chr6_4:42426869-42426888 | None:intergenic | 40.0% | |
| TGATCTCGGATGCATAAAGT+AGG | - | chr6_4:42426872-42426891 | Msa0988510:exon | 40.0% | |
| CATTACAATGGGGTGCAATT+GGG | - | chr6_4:42426895-42426914 | Msa0988510:five_prime_UTR | 40.0% | |
| ACACTATGTGGCCAAGCTTA+TGG | - | chr6_4:42423330-42423349 | Msa0988510:intron | 45.0% | |
| AAAGAGATAGCCGATCTTGC+CGG | - | chr6_4:42423480-42423499 | Msa0988510:intron | 45.0% | |
| ! | GGCATATTTTCCGGCAAGAT+CGG | + | chr6_4:42423493-42423512 | None:intergenic | 45.0% |
| ACGGCGAAGGAAAACATGTA+GGG | + | chr6_4:42423528-42423547 | None:intergenic | 45.0% | |
| CTTCACGAGAGGCAAATTGA+CGG | + | chr6_4:42423547-42423566 | None:intergenic | 45.0% | |
| GCTTGAAGAAACTTCACGAG+AGG | + | chr6_4:42423558-42423577 | None:intergenic | 45.0% | |
| TCCTTCTTTGCACCAACCAA+TGG | + | chr6_4:42423745-42423764 | None:intergenic | 45.0% | |
| ! | TTGGTTGGTGCAAAGAAGGA+TGG | - | chr6_4:42423745-42423764 | Msa0988510:intron | 45.0% |
| TGGTGCAAAGAAGGATGGAA+TGG | - | chr6_4:42423750-42423769 | Msa0988510:intron | 45.0% | |
| GCTTGCATTATCCTTCTTGC+TGG | - | chr6_4:42423864-42423883 | Msa0988510:CDS | 45.0% | |
| AAGGAACCAACAGCAATGAC+AGG | + | chr6_4:42423903-42423922 | None:intergenic | 45.0% | |
| !! | TATAAGTGTCGGTGTCGTGT+CGG | + | chr6_4:42424019-42424038 | None:intergenic | 45.0% |
| ! | TGGAACATGATGCTGCTTCT+TGG | - | chr6_4:42424255-42424274 | Msa0988510:intron | 45.0% |
| TTGGAGTAAGTTCCGCAGTA+AGG | - | chr6_4:42424274-42424293 | Msa0988510:intron | 45.0% | |
| ACGAACATAGACACGGACAT+CGG | - | chr6_4:42424413-42424432 | Msa0988510:intron | 45.0% | |
| TAGAGACACGAACACTTGCA+AGG | + | chr6_4:42424833-42424852 | None:intergenic | 45.0% | |
| GTGTGGTAATTGGATGTGGA+TGG | - | chr6_4:42425221-42425240 | Msa0988510:intron | 45.0% | |
| TGGATGTGGATGGCAAGTTA+TGG | - | chr6_4:42425231-42425250 | Msa0988510:intron | 45.0% | |
| TGTGGATGGCAAGTTATGGT+TGG | - | chr6_4:42425235-42425254 | Msa0988510:intron | 45.0% | |
| ATACCTTGACCCCTAAATGC+TGG | + | chr6_4:42425324-42425343 | None:intergenic | 45.0% | |
| ATACGACTAGGTGTGAGTAG+CGG | + | chr6_4:42425547-42425566 | None:intergenic | 45.0% | |
| ATAGGCGACCACTCATAGTT+TGG | + | chr6_4:42425876-42425895 | None:intergenic | 45.0% | |
| !! | ACATTGCCTGGAAAGCATCA+TGG | - | chr6_4:42425970-42425989 | Msa0988510:intron | 45.0% |
| TAAGACCAACTGGACCAAAG+AGG | - | chr6_4:42426121-42426140 | Msa0988510:intron | 45.0% | |
| CGGCTAATCGCATGAGAATT+TGG | - | chr6_4:42426437-42426456 | Msa0988510:intron | 45.0% | |
| GTGCACATGCATAGTCACTT+TGG | - | chr6_4:42426518-42426537 | Msa0988510:intron | 45.0% | |
| CTTTATGGAGGAGTCAACAC+TGG | + | chr6_4:42426826-42426845 | None:intergenic | 45.0% | |
| ACCATAGCCCAGTTTGATCT+CGG | - | chr6_4:42426858-42426877 | Msa0988510:CDS | 45.0% | |
| GCATTACAATGGGGTGCAAT+TGG | - | chr6_4:42426894-42426913 | Msa0988510:five_prime_UTR | 45.0% | |
| AATGATTCACTGTGGGGATG+AGG | + | chr6_4:42426972-42426991 | None:intergenic | 45.0% | |
| AAGCAACAACCAAGACCACG+TGG | + | chr6_4:42422165-42422184 | None:intergenic | 50.0% | |
| ! | ACGTGGTCTTGGTTGTTGCT+TGG | - | chr6_4:42422164-42422183 | Msa0988510:three_prime_UTR | 50.0% |
| ! | CGTGGTCTTGGTTGTTGCTT+GGG | - | chr6_4:42422165-42422184 | Msa0988510:three_prime_UTR | 50.0% |
| GACGGCGAAGGAAAACATGT+AGG | + | chr6_4:42423529-42423548 | None:intergenic | 50.0% | |
| ! | GCCATTGGTTGGTGCAAAGA+AGG | - | chr6_4:42423741-42423760 | Msa0988510:intron | 50.0% |
| ACGAAGCACAGACTCAGACA+CGG | + | chr6_4:42424107-42424126 | None:intergenic | 50.0% | |
| ! | CATAGGTATCGTGTCGGTGT+TGG | - | chr6_4:42424505-42424524 | Msa0988510:intron | 50.0% |
| ACTGGAACACCCCTAATCAG+TGG | - | chr6_4:42424547-42424566 | Msa0988510:intron | 50.0% | |
| CAACCAGCATTTAGGGGTCA+AGG | - | chr6_4:42425318-42425337 | Msa0988510:CDS | 50.0% | |
| GGTCGTTGGTCCGAAATGAT+AGG | - | chr6_4:42425592-42425611 | Msa0988510:CDS | 50.0% | |
| CTATGGGGAGGAACAATGTG+CGG | - | chr6_4:42426059-42426078 | Msa0988510:intron | 50.0% | |
| ! | GACTGAGGGGGCTTGATTTT+GGG | + | chr6_4:42426631-42426650 | None:intergenic | 50.0% |
| ! | AGACTGAGGGGGCTTGATTT+TGG | + | chr6_4:42426632-42426651 | None:intergenic | 50.0% |
| ACGAAATTCTAGCCCGTGCT+TGG | + | chr6_4:42426725-42426744 | None:intergenic | 50.0% | |
| TCCGAGATCAAACTGGGCTA+TGG | + | chr6_4:42426862-42426881 | None:intergenic | 50.0% | |
| TACCCAAACCTGTCTGGGAA+GGG | + | chr6_4:42426937-42426956 | None:intergenic | 50.0% | |
| ATACCCAAACCTGTCTGGGA+AGG | + | chr6_4:42426938-42426957 | None:intergenic | 50.0% | |
| TGTGGCCAAGCTTATGGTGC+AGG | - | chr6_4:42423336-42423355 | Msa0988510:intron | 55.0% | |
| GAGAGGCAAATTGACGGCGA+AGG | + | chr6_4:42423541-42423560 | None:intergenic | 55.0% | |
| TTGGCTTAGGGTCTATGGGG+AGG | - | chr6_4:42426047-42426066 | Msa0988510:intron | 55.0% | |
| ATAGTGACCCGTGCCAAGCA+CGG | - | chr6_4:42426709-42426728 | Msa0988510:CDS | 55.0% | |
| ATTCTAGCCCGTGCTTGGCA+CGG | + | chr6_4:42426720-42426739 | None:intergenic | 55.0% | |
| TACGTTTCCCCTTCCCAGAC+AGG | - | chr6_4:42426926-42426945 | Msa0988510:five_prime_UTR | 55.0% | |
| TTCCCCTTCCCAGACAGGTT+TGG | - | chr6_4:42426931-42426950 | Msa0988510:five_prime_UTR | 55.0% | |
| TCCCCTTCCCAGACAGGTTT+GGG | - | chr6_4:42426932-42426951 | Msa0988510:five_prime_UTR | 55.0% | |
| ACCCAAACCTGTCTGGGAAG+GGG | + | chr6_4:42426936-42426955 | None:intergenic | 55.0% | |
| GGGGATACCCAAACCTGTCT+GGG | + | chr6_4:42426942-42426961 | None:intergenic | 55.0% | |
| ! | TCCTCGGATTAGGCGTGTCC+TGG | - | chr6_4:42423968-42423987 | Msa0988510:intron | 60.0% |
| ACCAGGACACGCCTAATCCG+AGG | + | chr6_4:42423972-42423991 | None:intergenic | 60.0% | |
| ! | CATCGACGCGTGTCTGAGAC+TGG | - | chr6_4:42424529-42424548 | Msa0988510:intron | 60.0% |
| TAGTGACCCGTGCCAAGCAC+GGG | - | chr6_4:42426710-42426729 | Msa0988510:CDS | 60.0% | |
| TTCTAGCCCGTGCTTGGCAC+GGG | + | chr6_4:42426719-42426738 | None:intergenic | 60.0% | |
| CGGGGATACCCAAACCTGTC+TGG | + | chr6_4:42426943-42426962 | None:intergenic | 60.0% | |
| TGTGGGGATGAGGATGCGAC+GGG | + | chr6_4:42426962-42426981 | None:intergenic | 60.0% | |
| CTGTGGGGATGAGGATGCGA+CGG | + | chr6_4:42426963-42426982 | None:intergenic | 60.0% | |
| GTGGGGATGAGGATGCGACG+GGG | + | chr6_4:42426961-42426980 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 42422159 | 42426995 | 42422159 | ID=Msa0988510;Name=Msa0988510 |
| chr6_4 | mRNA | 42422159 | 42426995 | 42422159 | ID=Msa0988510-mRNA-1;Parent=Msa0988510;Name=Msa0988510-mRNA-1;_AED=0.18;_eAED=0.18;_QI=105|0.66|0.57|1|1|1|7|503|449 |
| chr6_4 | exon | 42422159 | 42422727 | 42422159 | ID=Msa0988510-mRNA-1:exon:9939;Parent=Msa0988510-mRNA-1 |
| chr6_4 | exon | 42423012 | 42423098 | 42423012 | ID=Msa0988510-mRNA-1:exon:9938;Parent=Msa0988510-mRNA-1 |
| chr6_4 | exon | 42423815 | 42423933 | 42423815 | ID=Msa0988510-mRNA-1:exon:9937;Parent=Msa0988510-mRNA-1 |
| chr6_4 | exon | 42424077 | 42424239 | 42424077 | ID=Msa0988510-mRNA-1:exon:9936;Parent=Msa0988510-mRNA-1 |
| chr6_4 | exon | 42424859 | 42424902 | 42424859 | ID=Msa0988510-mRNA-1:exon:9935;Parent=Msa0988510-mRNA-1 |
| chr6_4 | exon | 42425239 | 42425848 | 42425239 | ID=Msa0988510-mRNA-1:exon:9934;Parent=Msa0988510-mRNA-1 |
| chr6_4 | exon | 42426630 | 42426995 | 42426630 | ID=Msa0988510-mRNA-1:exon:9933;Parent=Msa0988510-mRNA-1 |
| chr6_4 | five_prime_UTR | 42426891 | 42426995 | 42426891 | ID=Msa0988510-mRNA-1:five_prime_utr;Parent=Msa0988510-mRNA-1 |
| chr6_4 | CDS | 42426630 | 42426890 | 42426630 | ID=Msa0988510-mRNA-1:cds;Parent=Msa0988510-mRNA-1 |
| chr6_4 | CDS | 42425239 | 42425848 | 42425239 | ID=Msa0988510-mRNA-1:cds;Parent=Msa0988510-mRNA-1 |
| chr6_4 | CDS | 42424859 | 42424902 | 42424859 | ID=Msa0988510-mRNA-1:cds;Parent=Msa0988510-mRNA-1 |
| chr6_4 | CDS | 42424077 | 42424239 | 42424077 | ID=Msa0988510-mRNA-1:cds;Parent=Msa0988510-mRNA-1 |
| chr6_4 | CDS | 42423815 | 42423933 | 42423815 | ID=Msa0988510-mRNA-1:cds;Parent=Msa0988510-mRNA-1 |
| chr6_4 | CDS | 42423012 | 42423098 | 42423012 | ID=Msa0988510-mRNA-1:cds;Parent=Msa0988510-mRNA-1 |
| chr6_4 | CDS | 42422662 | 42422727 | 42422662 | ID=Msa0988510-mRNA-1:cds;Parent=Msa0988510-mRNA-1 |
| chr6_4 | three_prime_UTR | 42422159 | 42422661 | 42422159 | ID=Msa0988510-mRNA-1:three_prime_utr;Parent=Msa0988510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
