Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081220 | XP_013450280.1 | 97.297 | 407 | 11 | 0 | 1 | 407 | 1 | 407 | 0.0 | 803 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081220 | sp|Q9SF09|ANT1_ARATH | 63.895 | 421 | 137 | 3 | 2 | 407 | 12 | 432 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081220 | A0A072U589 | 97.297 | 407 | 11 | 0 | 1 | 407 | 1 | 407 | 0.0 | 803 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021210 | Msa1081220 | 0.807778 | 4.280728e-50 | -8.615850e-47 |
| Msa0045550 | Msa1081220 | 0.823361 | 1.443575e-53 | -8.615850e-47 |
| Msa0046560 | Msa1081220 | 0.850957 | 1.212926e-60 | -8.615850e-47 |
| Msa0051450 | Msa1081220 | 0.805717 | 1.166515e-49 | -8.615850e-47 |
| Msa0090390 | Msa1081220 | 0.827456 | 1.549062e-54 | -8.615850e-47 |
| Msa0613710 | Msa1081220 | 0.804251 | 2.362411e-49 | -8.615850e-47 |
| Msa0638350 | Msa1081220 | 0.811447 | 6.970521e-51 | -8.615850e-47 |
| Msa0638360 | Msa1081220 | 0.836356 | 9.816729e-57 | -8.615850e-47 |
| Msa0640940 | Msa1081220 | 0.836433 | 9.384726e-57 | -8.615850e-47 |
| Msa0641340 | Msa1081220 | 0.807015 | 6.214392e-50 | -8.615850e-47 |
| Msa0641730 | Msa1081220 | 0.806829 | 6.802529e-50 | -8.615850e-47 |
| Msa0679360 | Msa1081220 | 0.826234 | 3.033862e-54 | -8.615850e-47 |
| Msa0689420 | Msa1081220 | 0.805544 | 1.267969e-49 | -8.615850e-47 |
| Msa0689760 | Msa1081220 | 0.805055 | 1.605678e-49 | -8.615850e-47 |
| Msa0696850 | Msa1081220 | 0.822904 | 1.845505e-53 | -8.615850e-47 |
| Msa0698440 | Msa1081220 | 0.814598 | 1.420125e-51 | -8.615850e-47 |
| Msa0709120 | Msa1081220 | 0.838919 | 2.159737e-57 | -8.615850e-47 |
| Msa0709160 | Msa1081220 | 0.801725 | 7.862456e-49 | -8.615850e-47 |
| Msa0711130 | Msa1081220 | 0.811386 | 7.184450e-51 | -8.615850e-47 |
| Msa0716860 | Msa1081220 | 0.802078 | 6.655096e-49 | -8.615850e-47 |
| Msa0721340 | Msa1081220 | 0.812495 | 4.120539e-51 | -8.615850e-47 |
| Msa0750250 | Msa1081220 | 0.809747 | 1.623873e-50 | -8.615850e-47 |
| Msa0754920 | Msa1081220 | 0.800229 | 1.589770e-48 | -8.615850e-47 |
| Msa0756380 | Msa1081220 | 0.810166 | 1.319507e-50 | -8.615850e-47 |
| Msa0758250 | Msa1081220 | 0.816644 | 4.971371e-52 | -8.615850e-47 |
| Msa0763400 | Msa1081220 | 0.802423 | 5.650984e-49 | -8.615850e-47 |
| Msa0763890 | Msa1081220 | 0.804904 | 1.726871e-49 | -8.615850e-47 |
| Msa0763920 | Msa1081220 | 0.809570 | 1.772532e-50 | -8.615850e-47 |
| Msa0789560 | Msa1081220 | 0.857484 | 1.581572e-62 | -8.615850e-47 |
| Msa0808100 | Msa1081220 | 0.802467 | 5.534021e-49 | -8.615850e-47 |
| Msa0809140 | Msa1081220 | 0.809304 | 2.021668e-50 | -8.615850e-47 |
| Msa0137870 | Msa1081220 | 0.825163 | 5.445779e-54 | -8.615850e-47 |
| Msa0138210 | Msa1081220 | 0.806636 | 7.472949e-50 | -8.615850e-47 |
| Msa0139670 | Msa1081220 | 0.841449 | 4.718772e-58 | -8.615850e-47 |
| Msa0175050 | Msa1081220 | 0.831828 | 1.337741e-55 | -8.615850e-47 |
| Msa0187830 | Msa1081220 | 0.809148 | 2.183262e-50 | -8.615850e-47 |
| Msa0194010 | Msa1081220 | 0.833748 | 4.462666e-56 | -8.615850e-47 |
| Msa0200650 | Msa1081220 | 0.816034 | 6.809652e-52 | -8.615850e-47 |
| Msa0226180 | Msa1081220 | 0.817477 | 3.231588e-52 | -8.615850e-47 |
| Msa0232340 | Msa1081220 | 0.808226 | 3.436357e-50 | -8.615850e-47 |
| Msa0233380 | Msa1081220 | 0.803652 | 3.147525e-49 | -8.615850e-47 |
| Msa0235880 | Msa1081220 | 0.845695 | 3.458996e-59 | -8.615850e-47 |
| Msa0236770 | Msa1081220 | 0.804866 | 1.758554e-49 | -8.615850e-47 |
| Msa0377440 | Msa1081220 | 0.808113 | 3.632828e-50 | -8.615850e-47 |
| Msa0382370 | Msa1081220 | 0.838272 | 3.173746e-57 | -8.615850e-47 |
| Msa0387810 | Msa1081220 | 0.802554 | 5.310396e-49 | -8.615850e-47 |
| Msa0388650 | Msa1081220 | 0.974794 | 8.706121e-139 | -8.615850e-47 |
| Msa0390530 | Msa1081220 | 0.807334 | 5.317231e-50 | -8.615850e-47 |
| Msa0390960 | Msa1081220 | 0.803391 | 3.564672e-49 | -8.615850e-47 |
| Msa0395980 | Msa1081220 | 0.818352 | 2.049750e-52 | -8.615850e-47 |
| Msa0398200 | Msa1081220 | 0.844214 | 8.683881e-59 | -8.615850e-47 |
| Msa0432160 | Msa1081220 | 0.828559 | 8.405406e-55 | -8.615850e-47 |
| Msa0432670 | Msa1081220 | 0.801057 | 1.077247e-48 | -8.615850e-47 |
| Msa0438040 | Msa1081220 | 0.806204 | 9.216779e-50 | -8.615850e-47 |
| Msa0476680 | Msa1081220 | 0.823272 | 1.514706e-53 | -8.615850e-47 |
| Msa0981310 | Msa1081220 | 0.802651 | 5.071373e-49 | -8.615850e-47 |
| Msa0992580 | Msa1081220 | 0.800840 | 1.193524e-48 | -8.615850e-47 |
| Msa0992600 | Msa1081220 | 0.821807 | 3.317657e-53 | -8.615850e-47 |
| Msa1006010 | Msa1081220 | -0.817293 | 3.554803e-52 | -8.615850e-47 |
| Msa1034700 | Msa1081220 | 0.807204 | 5.667272e-50 | -8.615850e-47 |
| Msa1037520 | Msa1081220 | 0.801395 | 9.188548e-49 | -8.615850e-47 |
| Msa1040980 | Msa1081220 | 0.821939 | 3.091415e-53 | -8.615850e-47 |
| Msa1042660 | Msa1081220 | 0.806059 | 9.887062e-50 | -8.615850e-47 |
| Msa1063420 | Msa1081220 | 0.804049 | 2.602629e-49 | -8.615850e-47 |
| Msa1072900 | Msa1081220 | 0.816010 | 6.893945e-52 | -8.615850e-47 |
| Msa1081220 | Msa1081240 | 0.990293 | 5.929474e-182 | -8.615850e-47 |
| Msa1081220 | Msa1126570 | 0.840506 | 8.345507e-58 | -8.615850e-47 |
| Msa1081220 | Msa1127380 | 0.845898 | 3.046239e-59 | -8.615850e-47 |
| Msa1081220 | Msa1127430 | 0.845597 | 3.677859e-59 | -8.615850e-47 |
| Msa1081220 | Msa1130400 | 0.805459 | 1.321260e-49 | -8.615850e-47 |
| Msa1081220 | Msa1163870 | 0.800180 | 1.626773e-48 | -8.615850e-47 |
| Msa1081220 | Msa1174310 | 0.803609 | 3.212542e-49 | -8.615850e-47 |
| Msa1081220 | Msa1177780 | 0.827230 | 1.754520e-54 | -8.615850e-47 |
| Msa1081220 | Msa1205590 | 0.802108 | 6.560521e-49 | -8.615850e-47 |
| Msa1081220 | Msa1208790 | 0.817042 | 4.049222e-52 | -8.615850e-47 |
| Msa1081220 | Msa1211340 | 0.802841 | 4.633079e-49 | -8.615850e-47 |
| Msa1081220 | Msa1234620 | 0.846149 | 2.604543e-59 | -8.615850e-47 |
| Msa1081220 | Msa1258980 | 0.813849 | 2.078855e-51 | -8.615850e-47 |
| Msa1081220 | Msa1270660 | 0.802563 | 5.287413e-49 | -8.615850e-47 |
| Msa1081220 | Msa1272620 | 0.803291 | 3.738395e-49 | -8.615850e-47 |
| Msa1081220 | Msa1297530 | 0.813100 | 3.036031e-51 | -8.615850e-47 |
| Msa1081220 | Msa1329790 | 0.800858 | 1.182970e-48 | -8.615850e-47 |
| Msa1081220 | Msa1330630 | 0.816667 | 4.914758e-52 | -8.615850e-47 |
| Msa1081220 | Msa1332050 | 0.834859 | 2.348879e-56 | -8.615850e-47 |
| Msa1081220 | Msa1336040 | 0.848987 | 4.316084e-60 | -8.615850e-47 |
| Msa1081220 | Msa1370590 | 0.808360 | 3.218387e-50 | -8.615850e-47 |
| Msa1081220 | Msa1372290 | 0.808976 | 2.377148e-50 | -8.615850e-47 |
| Msa1081220 | Msa1384100 | 0.811549 | 6.623699e-51 | -8.615850e-47 |
| Msa1081220 | Msa1391720 | 0.806433 | 8.246617e-50 | -8.615850e-47 |
| Msa1081220 | Msa1392160 | -0.803170 | 3.961992e-49 | -8.615850e-47 |
| Msa1081220 | Msa1400930 | 0.800911 | 1.153906e-48 | -8.615850e-47 |
| Msa1081220 | Msa1401460 | 0.815030 | 1.139144e-51 | -8.615850e-47 |
| Msa1081220 | Msa1420250 | 0.803934 | 2.750291e-49 | -8.615850e-47 |
| Msa1081220 | Msa1426910 | 0.841147 | 5.666964e-58 | -8.615850e-47 |
| Msa1081220 | Msa1433220 | 0.811115 | 8.225059e-51 | -8.615850e-47 |
| Msa1081220 | Msa1434040 | 0.814587 | 1.428353e-51 | -8.615850e-47 |
| Msa1081220 | Msa1442790 | 0.804421 | 2.177389e-49 | -8.615850e-47 |
| Msa1081220 | Msa1443610 | 0.813715 | 2.224689e-51 | -8.615850e-47 |
| Msa1081220 | Msa1444120 | 0.817180 | 3.769750e-52 | -8.615850e-47 |
| Msa1081220 | Msa1446080 | 0.808362 | 3.214408e-50 | -8.615850e-47 |
| Msa1081220 | Msa1454960 | 0.808019 | 3.803104e-50 | -8.615850e-47 |
| Msa1081220 | Msa1456230 | 0.858222 | 9.556713e-63 | -8.615850e-47 |
| Msa1081220 | Msa1458340 | 0.808357 | 3.223325e-50 | -8.615850e-47 |
| Msa0249550 | Msa1081220 | 0.801537 | 8.591806e-49 | -8.615850e-47 |
| Msa0271790 | Msa1081220 | 0.811928 | 5.477940e-51 | -8.615850e-47 |
| Msa0287790 | Msa1081220 | 0.800551 | 1.366694e-48 | -8.615850e-47 |
| Msa0304840 | Msa1081220 | 0.837005 | 6.708648e-57 | -8.615850e-47 |
| Msa0310430 | Msa1081220 | 0.814456 | 1.526918e-51 | -8.615850e-47 |
| Msa0341230 | Msa1081220 | 0.844397 | 7.756203e-59 | -8.615850e-47 |
| Msa0347950 | Msa1081220 | 0.810899 | 9.163624e-51 | -8.615850e-47 |
| Msa0347990 | Msa1081220 | 0.817850 | 2.662805e-52 | -8.615850e-47 |
| Msa0482940 | Msa1081220 | 0.813942 | 1.982829e-51 | -8.615850e-47 |
| Msa0485490 | Msa1081220 | 0.810108 | 1.357993e-50 | -8.615850e-47 |
| Msa0491000 | Msa1081220 | 0.807841 | 4.150794e-50 | -8.615850e-47 |
| Msa0517650 | Msa1081220 | 0.800419 | 1.454179e-48 | -8.615850e-47 |
| Msa0521010 | Msa1081220 | 0.825380 | 4.837851e-54 | -8.615850e-47 |
| Msa0566350 | Msa1081220 | 0.804420 | 2.178705e-49 | -8.615850e-47 |
| Msa0566750 | Msa1081220 | 0.805193 | 1.501987e-49 | -8.615850e-47 |
| Msa0588220 | Msa1081220 | 0.806807 | 6.874776e-50 | -8.615850e-47 |
| Msa0592180 | Msa1081220 | 0.806051 | 9.924050e-50 | -8.615850e-47 |
| Msa0594200 | Msa1081220 | 0.810248 | 1.266683e-50 | -8.615850e-47 |
| Msa0600450 | Msa1081220 | 0.820488 | 6.678993e-53 | -8.615850e-47 |
| Msa0857300 | Msa1081220 | 0.824845 | 6.473289e-54 | -8.615850e-47 |
| Msa0877710 | Msa1081220 | 0.801124 | 1.043921e-48 | -8.615850e-47 |
| Msa0903780 | Msa1081220 | 0.802818 | 4.684134e-49 | -8.615850e-47 |
| Msa0921420 | Msa1081220 | 0.813834 | 2.094631e-51 | -8.615850e-47 |
| Msa0937430 | Msa1081220 | 0.806685 | 7.296602e-50 | -8.615850e-47 |
| Msa0945120 | Msa1081220 | 0.818622 | 1.780182e-52 | -8.615850e-47 |
| Msa0960390 | Msa1081220 | 0.801236 | 9.905402e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081220 | MtrunA17_Chr7g0268151 | 98.513 | 269 | 4 | 0 | 139 | 407 | 1 | 269 | 0.0 | 534 |
| Msa1081220 | MtrunA17_Chr5g0407141 | 37.440 | 414 | 229 | 7 | 3 | 404 | 19 | 414 | 1.12e-74 | 238 |
| Msa1081220 | MtrunA17_Chr8g0370311 | 37.681 | 414 | 231 | 5 | 4 | 407 | 12 | 408 | 2.33e-73 | 235 |
| Msa1081220 | MtrunA17_Chr8g0361631 | 27.842 | 431 | 259 | 13 | 1 | 407 | 1 | 403 | 2.06e-34 | 132 |
| Msa1081220 | MtrunA17_Chr7g0217401 | 25.829 | 422 | 277 | 11 | 2 | 407 | 26 | 427 | 1.43e-30 | 121 |
| Msa1081220 | MtrunA17_Chr8g0361641 | 26.562 | 384 | 251 | 10 | 34 | 407 | 1 | 363 | 1.46e-29 | 117 |
| Msa1081220 | MtrunA17_Chr7g0217381 | 25.118 | 422 | 281 | 11 | 1 | 407 | 25 | 426 | 1.87e-29 | 118 |
| Msa1081220 | MtrunA17_Chr3g0090101 | 25.879 | 398 | 262 | 11 | 21 | 407 | 5 | 380 | 9.51e-26 | 107 |
| Msa1081220 | MtrunA17_Chr3g0105861 | 25.121 | 414 | 281 | 9 | 4 | 407 | 33 | 427 | 4.28e-25 | 106 |
| Msa1081220 | MtrunA17_Chr8g0361211 | 24.557 | 395 | 267 | 8 | 17 | 401 | 68 | 441 | 1.13e-24 | 105 |
| Msa1081220 | MtrunA17_Chr8g0361591 | 29.023 | 348 | 217 | 8 | 34 | 372 | 1 | 327 | 3.30e-24 | 102 |
| Msa1081220 | MtrunA17_Chr4g0022261 | 24.257 | 404 | 278 | 8 | 14 | 407 | 135 | 520 | 3.49e-24 | 104 |
| Msa1081220 | MtrunA17_Chr7g0256281 | 26.683 | 401 | 257 | 11 | 17 | 407 | 146 | 519 | 1.33e-23 | 102 |
| Msa1081220 | MtrunA17_Chr1g0171021 | 29.167 | 264 | 168 | 6 | 17 | 272 | 157 | 409 | 3.95e-23 | 100 |
| Msa1081220 | MtrunA17_Chr1g0199431 | 31.690 | 284 | 164 | 9 | 1 | 273 | 143 | 407 | 5.11e-23 | 100 |
| Msa1081220 | MtrunA17_Chr7g0239021 | 26.799 | 403 | 249 | 13 | 3 | 381 | 138 | 518 | 1.55e-17 | 84.7 |
| Msa1081220 | MtrunA17_Chr7g0239011 | 25.127 | 394 | 256 | 12 | 6 | 381 | 50 | 422 | 2.87e-16 | 80.5 |
| Msa1081220 | MtrunA17_Chr8g0376991 | 20.241 | 415 | 300 | 9 | 1 | 397 | 14 | 415 | 3.47e-15 | 77.0 |
| Msa1081220 | MtrunA17_Chr3g0122241 | 25.432 | 405 | 270 | 11 | 9 | 400 | 74 | 459 | 1.34e-14 | 75.5 |
| Msa1081220 | MtrunA17_Chr3g0077651 | 22.705 | 414 | 285 | 12 | 6 | 397 | 48 | 448 | 1.50e-14 | 75.1 |
| Msa1081220 | MtrunA17_Chr7g0256251 | 28.090 | 267 | 168 | 7 | 17 | 273 | 146 | 398 | 3.91e-14 | 73.6 |
| Msa1081220 | MtrunA17_Chr1g0184721 | 23.876 | 356 | 238 | 13 | 34 | 371 | 47 | 387 | 4.01e-14 | 73.6 |
| Msa1081220 | MtrunA17_Chr8g0366021 | 22.196 | 419 | 269 | 10 | 21 | 403 | 55 | 452 | 1.15e-12 | 69.3 |
| Msa1081220 | MtrunA17_Chr6g0458921 | 22.738 | 409 | 284 | 11 | 4 | 393 | 8 | 403 | 1.23e-12 | 68.9 |
| Msa1081220 | MtrunA17_Chr2g0328081 | 21.707 | 410 | 291 | 10 | 2 | 393 | 6 | 403 | 2.18e-12 | 68.2 |
| Msa1081220 | MtrunA17_Chr6g0459031 | 22.141 | 411 | 288 | 11 | 2 | 393 | 6 | 403 | 2.34e-12 | 68.2 |
| Msa1081220 | MtrunA17_Chr6g0459021 | 20.570 | 316 | 231 | 7 | 6 | 306 | 30 | 340 | 1.16e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081220 | AT3G11900.2 | 63.895 | 421 | 137 | 3 | 2 | 407 | 12 | 432 | 0.0 | 546 |
| Msa1081220 | AT3G11900.1 | 63.895 | 421 | 137 | 3 | 2 | 407 | 12 | 432 | 0.0 | 546 |
| Msa1081220 | AT4G38250.1 | 37.559 | 426 | 223 | 8 | 3 | 404 | 22 | 428 | 2.00e-83 | 262 |
| Msa1081220 | AT2G42005.1 | 37.650 | 417 | 225 | 7 | 3 | 404 | 11 | 407 | 2.26e-80 | 253 |
| Msa1081220 | AT5G65990.1 | 37.136 | 412 | 230 | 7 | 3 | 404 | 27 | 419 | 4.80e-70 | 227 |
| Msa1081220 | AT5G15240.1 | 24.289 | 387 | 265 | 8 | 28 | 404 | 48 | 416 | 3.21e-29 | 118 |
| Msa1081220 | AT2G39130.2 | 25.424 | 413 | 278 | 10 | 1 | 404 | 150 | 541 | 4.24e-27 | 113 |
| Msa1081220 | AT2G39130.1 | 25.424 | 413 | 278 | 10 | 1 | 404 | 150 | 541 | 4.24e-27 | 113 |
| Msa1081220 | AT5G02180.1 | 26.442 | 416 | 267 | 12 | 4 | 404 | 150 | 541 | 9.65e-26 | 109 |
| Msa1081220 | AT5G02180.2 | 26.442 | 416 | 267 | 12 | 4 | 404 | 150 | 541 | 9.65e-26 | 109 |
| Msa1081220 | AT3G09340.1 | 27.047 | 403 | 255 | 13 | 17 | 404 | 138 | 516 | 1.32e-23 | 103 |
| Msa1081220 | AT3G09330.1 | 27.295 | 403 | 254 | 14 | 17 | 404 | 138 | 516 | 1.44e-23 | 103 |
| Msa1081220 | AT2G41190.1 | 23.645 | 406 | 276 | 10 | 14 | 407 | 148 | 531 | 4.95e-23 | 101 |
| Msa1081220 | AT5G15240.3 | 23.529 | 340 | 237 | 6 | 75 | 404 | 4 | 330 | 1.81e-22 | 97.8 |
| Msa1081220 | AT3G54830.2 | 27.027 | 370 | 229 | 11 | 10 | 360 | 147 | 494 | 2.22e-21 | 96.7 |
| Msa1081220 | AT3G54830.1 | 27.027 | 370 | 229 | 11 | 10 | 360 | 147 | 494 | 2.22e-21 | 96.7 |
| Msa1081220 | AT2G39130.3 | 28.315 | 279 | 178 | 8 | 3 | 273 | 152 | 416 | 4.27e-21 | 95.5 |
| Msa1081220 | AT3G28960.5 | 23.171 | 410 | 264 | 11 | 13 | 401 | 16 | 395 | 4.89e-21 | 94.7 |
| Msa1081220 | AT3G28960.2 | 23.171 | 410 | 264 | 11 | 13 | 401 | 16 | 395 | 4.89e-21 | 94.7 |
| Msa1081220 | AT3G28960.3 | 23.171 | 410 | 264 | 11 | 13 | 401 | 16 | 395 | 4.89e-21 | 94.7 |
| Msa1081220 | AT3G28960.1 | 23.171 | 410 | 264 | 11 | 13 | 401 | 16 | 395 | 4.89e-21 | 94.7 |
| Msa1081220 | AT5G02170.1 | 26.434 | 401 | 261 | 13 | 17 | 404 | 139 | 518 | 9.19e-21 | 94.7 |
| Msa1081220 | AT5G16740.1 | 23.133 | 415 | 288 | 10 | 2 | 403 | 16 | 412 | 2.66e-19 | 89.7 |
| Msa1081220 | AT3G28960.4 | 24.107 | 336 | 223 | 9 | 81 | 401 | 8 | 326 | 7.53e-18 | 84.3 |
| Msa1081220 | AT5G02170.2 | 25.067 | 375 | 234 | 13 | 17 | 386 | 139 | 471 | 1.38e-15 | 79.0 |
| Msa1081220 | AT2G41190.2 | 24.252 | 301 | 203 | 8 | 14 | 303 | 148 | 434 | 2.70e-15 | 78.2 |
| Msa1081220 | AT1G24400.1 | 21.212 | 363 | 251 | 11 | 1 | 343 | 19 | 366 | 2.04e-11 | 65.9 |
| Msa1081220 | AT1G48640.1 | 22.927 | 410 | 268 | 13 | 1 | 382 | 31 | 420 | 5.37e-11 | 64.7 |
Find 100 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTACAATCTCATTAAT+TGG | 0.119192 | 7_2:-81035094 | None:intergenic |
| ACATTTCACCTAAAATTATT+TGG | 0.180848 | 7_2:+81035304 | Msa1081220:CDS |
| AAAGTCTGAGCCAGCAATTT+TGG | 0.194534 | 7_2:-81034157 | None:intergenic |
| CGGATTGCTGGTTGGGTTGC+TGG | 0.195646 | 7_2:+81032997 | Msa1081220:CDS |
| ATGCTAGTACCAGTTGAAAT+TGG | 0.202789 | 7_2:+81033875 | Msa1081220:CDS |
| TTGAAGCTTTGAAGCTCTTT+TGG | 0.211711 | 7_2:-81032911 | None:intergenic |
| GCTTCATTTGTGCCAGAATT+TGG | 0.237616 | 7_2:+81035220 | Msa1081220:CDS |
| GAATGGATTCGTTGCTAAAA+AGG | 0.256311 | 7_2:-81032707 | None:intergenic |
| GTTGCGTATTTGGTATTTAT+TGG | 0.257482 | 7_2:+81033794 | Msa1081220:CDS |
| TGCAGGATCTGTTGCGTATT+TGG | 0.266618 | 7_2:+81033784 | Msa1081220:CDS |
| GCTTCAAAGCTTCAAACTTT+GGG | 0.276040 | 7_2:+81032919 | Msa1081220:CDS |
| TGTAGTTGGAACTGGTGTTT+TGG | 0.282817 | 7_2:+81032957 | Msa1081220:CDS |
| TTGCGTATTTGGTATTTATT+GGG | 0.311051 | 7_2:+81033795 | Msa1081220:CDS |
| AGCTTCAAAGCTTCAAACTT+TGG | 0.322711 | 7_2:+81032918 | Msa1081220:CDS |
| CGGCAATCACGTCGAACATT+GGG | 0.331674 | 7_2:+81034038 | Msa1081220:CDS |
| AATATCATTGTTACTGTAGT+TGG | 0.346950 | 7_2:+81032943 | Msa1081220:CDS |
| TTATGTGGTTACATGGCTTT+TGG | 0.362879 | 7_2:+81034214 | Msa1081220:CDS |
| AAGTAGGAGCATGCAATAAT+AGG | 0.366520 | 7_2:-81033052 | None:intergenic |
| CTTCTACAATCTCATTAATT+GGG | 0.367121 | 7_2:-81035093 | None:intergenic |
| ATTAGATACTAACACGCAAC+TGG | 0.367677 | 7_2:-81032848 | None:intergenic |
| AAACGAAAACCCATCCTCTA+AGG | 0.374336 | 7_2:-81034005 | None:intergenic |
| AGCTAAATTCCCAAAATTGC+TGG | 0.379222 | 7_2:+81034147 | Msa1081220:CDS |
| TGCTATTGTGGTGGTTGTGC+TGG | 0.379392 | 7_2:+81035189 | Msa1081220:CDS |
| GGAACTTACAACACAATTGT+TGG | 0.382897 | 7_2:+81035400 | Msa1081220:CDS |
| TTCTCTATGCCTCTGGCAAA+AGG | 0.387302 | 7_2:+81035330 | Msa1081220:CDS |
| TTGGCTCTTCTCTATGCCTC+TGG | 0.390599 | 7_2:+81035323 | Msa1081220:CDS |
| TGCTAGTACCAGTTGAAATT+GGG | 0.393945 | 7_2:+81033876 | Msa1081220:CDS |
| GACCTGGGTTATAGATGCTT+TGG | 0.394530 | 7_2:+81033713 | Msa1081220:CDS |
| TTAATTGGGTGTAACATGAT+TGG | 0.395355 | 7_2:-81035079 | None:intergenic |
| CCAATTAATGAGATTGTAGA+AGG | 0.404740 | 7_2:+81035094 | Msa1081220:CDS |
| GGTTGGGTTGCTGGCTCGCT+TGG | 0.405595 | 7_2:+81033006 | Msa1081220:CDS |
| GAGGCAAATACACCAAATTC+TGG | 0.406786 | 7_2:-81035232 | None:intergenic |
| TTAGTGGAATCAAGATCTTA+TGG | 0.409655 | 7_2:+81033689 | Msa1081220:CDS |
| GTTGCCATTTGCAGCAGGCA+TGG | 0.411945 | 7_2:+81034063 | Msa1081220:CDS |
| AGTTGTATAAAAGCTTAAAC+AGG | 0.416166 | 7_2:-81035457 | None:intergenic |
| CTGGTCATCTCTTGCCGTAC+AGG | 0.421828 | 7_2:+81034279 | Msa1081220:CDS |
| TATCCTTCATAGAATTCTCT+AGG | 0.427773 | 7_2:-81034123 | None:intergenic |
| TATAGATGCTTTGGAACATT+CGG | 0.429944 | 7_2:+81033722 | Msa1081220:CDS |
| TAATTGGGTGTAACATGATT+GGG | 0.432015 | 7_2:-81035078 | None:intergenic |
| GGTGTATTTGCCTCATTTGT+GGG | 0.432173 | 7_2:+81035241 | Msa1081220:CDS |
| ACAGCCATGCCTGCTGCAAA+TGG | 0.444083 | 7_2:-81034067 | None:intergenic |
| TGGTGTATTTGCCTCATTTG+TGG | 0.444849 | 7_2:+81035240 | Msa1081220:CDS |
| ATTGTTACTGTAGTTGGAAC+TGG | 0.462436 | 7_2:+81032949 | Msa1081220:CDS |
| ATTAAGAGTCACAATGTCTC+TGG | 0.463981 | 7_2:-81034245 | None:intergenic |
| TTGGAGAGGTGGAAAATGAA+TGG | 0.471448 | 7_2:-81032724 | None:intergenic |
| CATGACATCCCAATTTCAAC+TGG | 0.479088 | 7_2:-81033884 | None:intergenic |
| TCGCTTGGTGTTGCTATCGT+TGG | 0.480171 | 7_2:+81033021 | Msa1081220:CDS |
| CTATAACATGTGTTTGATCA+TGG | 0.483240 | 7_2:+81032771 | Msa1081220:five_prime_UTR |
| AGATGTACGAGTGGCCTTAG+AGG | 0.486364 | 7_2:+81033991 | Msa1081220:CDS |
| TAAGTAAAATTAGGGTTCAT+CGG | 0.488206 | 7_2:-81032794 | None:intergenic |
| GCAAGAGATGACCAGCTCCT+AGG | 0.507015 | 7_2:-81034271 | None:intergenic |
| GGTTTGGTGCAGAGATAAGT+TGG | 0.507286 | 7_2:+81033652 | Msa1081220:intron |
| TACGAGTGGCCTTAGAGGAT+GGG | 0.517363 | 7_2:+81033996 | Msa1081220:CDS |
| CAGTTGAAATTGGGATGTCA+TGG | 0.517566 | 7_2:+81033885 | Msa1081220:CDS |
| ACGGCAATCACGTCGAACAT+TGG | 0.520931 | 7_2:+81034037 | Msa1081220:CDS |
| CTCTTAATCTCCCTAGGAGC+TGG | 0.522429 | 7_2:+81034260 | Msa1081220:CDS |
| CTTCAAAGCTTCAAACTTTG+GGG | 0.529013 | 7_2:+81032920 | Msa1081220:CDS |
| CAAGAGATGACCAGCTCCTA+GGG | 0.531338 | 7_2:-81034270 | None:intergenic |
| ATCAAGATCTTATGGAGACC+TGG | 0.532309 | 7_2:+81033697 | Msa1081220:CDS |
| GTACGAGTGGCCTTAGAGGA+TGG | 0.538625 | 7_2:+81033995 | Msa1081220:CDS |
| GGCATCAGAAGAGCCGTTAG+TGG | 0.542217 | 7_2:+81033673 | Msa1081220:CDS |
| TGCCCTAGAGAATTCTATGA+AGG | 0.544325 | 7_2:+81034120 | Msa1081220:CDS |
| TATGAATGTCTTTACCTGTA+CGG | 0.553018 | 7_2:-81034293 | None:intergenic |
| ACCAGCAATCCGAAAAGCAA+AGG | 0.553289 | 7_2:-81032986 | None:intergenic |
| TGGTACTAGCATAAATATGT+AGG | 0.553563 | 7_2:-81033864 | None:intergenic |
| ATACATCAGTCGTGCTATTG+TGG | 0.553742 | 7_2:+81035177 | Msa1081220:CDS |
| AAAAGAAAGCATTGCACACA+AGG | 0.559468 | 7_2:-81035269 | None:intergenic |
| ATGACAGGTAGGATTGTGCC+TGG | 0.559822 | 7_2:+81035039 | Msa1081220:intron |
| TTCCAAAGCATCTATAACCC+AGG | 0.563102 | 7_2:-81033715 | None:intergenic |
| CCAGCAATCCGAAAAGCAAA+GGG | 0.563950 | 7_2:-81032985 | None:intergenic |
| ATCCTTCATAGAATTCTCTA+GGG | 0.566292 | 7_2:-81034122 | None:intergenic |
| TGTGTGCAATGTCCTAGCTA+TGG | 0.568520 | 7_2:+81033952 | Msa1081220:CDS |
| TTAGATACTAACACGCAACT+GGG | 0.569251 | 7_2:-81032847 | None:intergenic |
| GATTATATTGTATTAATCAG+TGG | 0.569319 | 7_2:+81035358 | Msa1081220:CDS |
| TAAGATCTTGATTCCACTAA+CGG | 0.573803 | 7_2:-81033686 | None:intergenic |
| GACAGGTAGGATTGTGCCTG+GGG | 0.581164 | 7_2:+81035041 | Msa1081220:intron |
| CAAGGTACTCCCCACAAATG+AGG | 0.581605 | 7_2:-81035251 | None:intergenic |
| GATGCTTTGGAACATTCGGC+CGG | 0.581817 | 7_2:+81033726 | Msa1081220:CDS |
| TGATTAATACAATATAATCA+AGG | 0.583002 | 7_2:-81035354 | None:intergenic |
| ATCGTGGTAGCACAATGTGC+AGG | 0.583248 | 7_2:+81033767 | Msa1081220:CDS |
| TTGTGACTCTTAATCTCCCT+AGG | 0.586720 | 7_2:+81034254 | Msa1081220:CDS |
| GAAATTGGGATGTCATGGAT+AGG | 0.588699 | 7_2:+81033890 | Msa1081220:CDS |
| AGCTATGGGAATTGTAGTGA+AGG | 0.588848 | 7_2:+81033967 | Msa1081220:CDS |
| GTGTATTTGCCTCATTTGTG+GGG | 0.590797 | 7_2:+81035242 | Msa1081220:CDS |
| TCAAGATCTTATGGAGACCT+GGG | 0.593639 | 7_2:+81033698 | Msa1081220:CDS |
| TTATAAATTCTGTCAGATGC+CGG | 0.594196 | 7_2:-81033745 | None:intergenic |
| TGACAGGTAGGATTGTGCCT+GGG | 0.602408 | 7_2:+81035040 | Msa1081220:intron |
| TCACTACAATTCCCATAGCT+AGG | 0.603325 | 7_2:-81033964 | None:intergenic |
| GGCAATCACGTCGAACATTG+GGG | 0.609772 | 7_2:+81034039 | Msa1081220:CDS |
| GGAATGTGAACATAAGCCCC+AGG | 0.620030 | 7_2:-81035057 | None:intergenic |
| TCTGACAGAATTTATAATCG+TGG | 0.625652 | 7_2:+81033751 | Msa1081220:CDS |
| AATAATGATTCAATAAGACT+AGG | 0.630124 | 7_2:+81035142 | Msa1081220:CDS |
| TACTAGCATAAATATGTAGG+AGG | 0.630914 | 7_2:-81033861 | None:intergenic |
| GTGTGCAATGTCCTAGCTAT+GGG | 0.634606 | 7_2:+81033953 | Msa1081220:CDS |
| AATATGTAGGAGGCAAGCGA+TGG | 0.653012 | 7_2:-81033851 | None:intergenic |
| CAATCACGTCGAACATTGGG+GGG | 0.667136 | 7_2:+81034041 | Msa1081220:CDS |
| CATCAGTCGTGCTATTGTGG+TGG | 0.682697 | 7_2:+81035180 | Msa1081220:CDS |
| AGTGAAGGAAGATGTACGAG+TGG | 0.702478 | 7_2:+81033982 | Msa1081220:CDS |
| TAGATACTAACACGCAACTG+GGG | 0.703401 | 7_2:-81032846 | None:intergenic |
| GCAATCACGTCGAACATTGG+GGG | 0.711818 | 7_2:+81034040 | Msa1081220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGTAGTAAAAAAATAAAA+AGG | - | chr7_2:81033315-81033334 | None:intergenic | 10.0% |
| !! | ATCCAAATTTATGAAAAATT+GGG | - | chr7_2:81032825-81032844 | None:intergenic | 15.0% |
| !! | TATCCAAATTTATGAAAAAT+TGG | - | chr7_2:81032826-81032845 | None:intergenic | 15.0% |
| !!! | TTACTACTATTCTTTTTTAT+TGG | + | chr7_2:81033325-81033344 | Msa1081220:intron | 15.0% |
| !!! | TACTACTATTCTTTTTTATT+GGG | + | chr7_2:81033326-81033345 | Msa1081220:intron | 15.0% |
| !! | TGATTAATACAATATAATCA+AGG | - | chr7_2:81035357-81035376 | None:intergenic | 15.0% |
| !!! | GGGAATTTTAAGTAAAATTA+GGG | - | chr7_2:81032805-81032824 | None:intergenic | 20.0% |
| !!! | TGGGAATTTTAAGTAAAATT+AGG | - | chr7_2:81032806-81032825 | None:intergenic | 20.0% |
| !!! | TTCCCAATTTTTCATAAATT+TGG | + | chr7_2:81032820-81032839 | Msa1081220:five_prime_UTR | 20.0% |
| !! | ATCTAATTTCGACAAAAAAA+TGG | + | chr7_2:81032864-81032883 | Msa1081220:exon | 20.0% |
| !!! | ACTACTATTCTTTTTTATTG+GGG | + | chr7_2:81033327-81033346 | Msa1081220:intron | 20.0% |
| !! | TAGATTATTCCATTACTAAA+AGG | + | chr7_2:81033389-81033408 | Msa1081220:intron | 20.0% |
| !!! | ACATTAACATCTCAAATTTT+AGG | + | chr7_2:81034889-81034908 | Msa1081220:intron | 20.0% |
| !!! | CATTAACATCTCAAATTTTA+GGG | + | chr7_2:81034890-81034909 | Msa1081220:intron | 20.0% |
| !!! | AATTTCGTTATTTTTCCTAT+TGG | + | chr7_2:81034984-81035003 | Msa1081220:intron | 20.0% |
| !! | AATAATGATTCAATAAGACT+AGG | + | chr7_2:81035142-81035161 | Msa1081220:CDS | 20.0% |
| !!! | AAATAATTTTAGGTGAAATG+TGG | - | chr7_2:81035305-81035324 | None:intergenic | 20.0% |
| !! | ACATTTCACCTAAAATTATT+TGG | + | chr7_2:81035304-81035323 | Msa1081220:CDS | 20.0% |
| !! | GATTATATTGTATTAATCAG+TGG | + | chr7_2:81035358-81035377 | Msa1081220:CDS | 20.0% |
| ! | TAAGTAAAATTAGGGTTCAT+CGG | - | chr7_2:81032797-81032816 | None:intergenic | 25.0% |
| ! | AATATCATTGTTACTGTAGT+TGG | + | chr7_2:81032943-81032962 | Msa1081220:CDS | 25.0% |
| ! | TATAACATTTGTGAAAGTAG+TGG | - | chr7_2:81033284-81033303 | None:intergenic | 25.0% |
| ! | TGGAATAATCTAATCTAAGT+CGG | - | chr7_2:81033381-81033400 | None:intergenic | 25.0% |
| !!! | AAATTGGTTCCTTTTAGTAA+TGG | - | chr7_2:81033401-81033420 | None:intergenic | 25.0% |
| !! | GGAACCAATTTAAAGTAATA+CGG | + | chr7_2:81033410-81033429 | Msa1081220:intron | 25.0% |
| ! | TGTTCCGTATTACTTTAAAT+TGG | - | chr7_2:81033417-81033436 | None:intergenic | 25.0% |
| !!! | GATTTTGATTTCATTGATAC+AGG | + | chr7_2:81033631-81033650 | Msa1081220:intron | 25.0% |
| ! | TTGCGTATTTGGTATTTATT+GGG | + | chr7_2:81033795-81033814 | Msa1081220:CDS | 25.0% |
| !!! | ATTTTTGGAATACAGAATCA+AGG | - | chr7_2:81033826-81033845 | None:intergenic | 25.0% |
| ! | GATTCTGTATTCCAAAAATA+TGG | + | chr7_2:81033827-81033846 | Msa1081220:CDS | 25.0% |
| ! | GTGAAAGCAAAATATATACA+TGG | - | chr7_2:81034329-81034348 | None:intergenic | 25.0% |
| ! | TGGAAATTTATTATGTGCAT+TGG | + | chr7_2:81034781-81034800 | Msa1081220:intron | 25.0% |
| ! | AATTTATCCTTAGATGTCTA+CGG | + | chr7_2:81034805-81034824 | Msa1081220:intron | 25.0% |
| ! | AAATTTCCAATGCACATAAT+TGG | - | chr7_2:81034770-81034789 | None:intergenic | 25.0% |
| !! | TTTGTTGTAGACATGTATAA+AGG | - | chr7_2:81034860-81034879 | None:intergenic | 25.0% |
| ! | AACAAAATATTATGAACTCC+TGG | - | chr7_2:81034952-81034971 | None:intergenic | 25.0% |
| ! | CTTCTACAATCTCATTAATT+GGG | - | chr7_2:81035096-81035115 | None:intergenic | 25.0% |
| !!! | GGATTATTTTTTGCTGTTTA+TGG | + | chr7_2:81035379-81035398 | Msa1081220:CDS | 25.0% |
| ! | AGTTGTATAAAAGCTTAAAC+AGG | - | chr7_2:81035460-81035479 | None:intergenic | 25.0% |
| CTATAACATGTGTTTGATCA+TGG | + | chr7_2:81032771-81032790 | Msa1081220:five_prime_UTR | 30.0% | |
| !! | TCTTTTGGAAGATAACAAAG+GGG | - | chr7_2:81032899-81032918 | None:intergenic | 30.0% |
| !! | CTCTTTTGGAAGATAACAAA+GGG | - | chr7_2:81032900-81032919 | None:intergenic | 30.0% |
| ATGAGCATAGAATTTGATTC+AGG | + | chr7_2:81033173-81033192 | Msa1081220:intron | 30.0% | |
| ATTCAGGTAGGTTTCAATAT+TGG | + | chr7_2:81033189-81033208 | Msa1081220:intron | 30.0% | |
| AAATGCATCACGCATAATAA+TGG | - | chr7_2:81033461-81033480 | None:intergenic | 30.0% | |
| TTCATTATATGCAGGGAATT+CGG | + | chr7_2:81033583-81033602 | Msa1081220:intron | 30.0% | |
| TGATTTCATTGATACAGGTT+TGG | + | chr7_2:81033636-81033655 | Msa1081220:intron | 30.0% | |
| TAAGATCTTGATTCCACTAA+CGG | - | chr7_2:81033689-81033708 | None:intergenic | 30.0% | |
| TTAGTGGAATCAAGATCTTA+TGG | + | chr7_2:81033689-81033708 | Msa1081220:CDS | 30.0% | |
| !! | TATAGATGCTTTGGAACATT+CGG | + | chr7_2:81033722-81033741 | Msa1081220:CDS | 30.0% |
| TTATAAATTCTGTCAGATGC+CGG | - | chr7_2:81033748-81033767 | None:intergenic | 30.0% | |
| TCTGACAGAATTTATAATCG+TGG | + | chr7_2:81033751-81033770 | Msa1081220:CDS | 30.0% | |
| GTTGCGTATTTGGTATTTAT+TGG | + | chr7_2:81033794-81033813 | Msa1081220:CDS | 30.0% | |
| TACTAGCATAAATATGTAGG+AGG | - | chr7_2:81033864-81033883 | None:intergenic | 30.0% | |
| TGGTACTAGCATAAATATGT+AGG | - | chr7_2:81033867-81033886 | None:intergenic | 30.0% | |
| ACATCAGCAAAAATGCTAAA+TGG | - | chr7_2:81033935-81033954 | None:intergenic | 30.0% | |
| !!! | ATGGCTGTTTTTTGTTTTGA+GGG | + | chr7_2:81034082-81034101 | Msa1081220:CDS | 30.0% |
| ATCCTTCATAGAATTCTCTA+GGG | - | chr7_2:81034125-81034144 | None:intergenic | 30.0% | |
| TATCCTTCATAGAATTCTCT+AGG | - | chr7_2:81034126-81034145 | None:intergenic | 30.0% | |
| ! | ACACTCGTATACATTCTTTT+TGG | + | chr7_2:81034190-81034209 | Msa1081220:CDS | 30.0% |
| ! | CACTCGTATACATTCTTTTT+GGG | + | chr7_2:81034191-81034210 | Msa1081220:CDS | 30.0% |
| !!! | TACATTCTTTTTGGGTTATG+TGG | + | chr7_2:81034199-81034218 | Msa1081220:CDS | 30.0% |
| TATGAATGTCTTTACCTGTA+CGG | - | chr7_2:81034296-81034315 | None:intergenic | 30.0% | |
| AGCAGTATACTCAAATAACA+TGG | - | chr7_2:81034464-81034483 | None:intergenic | 30.0% | |
| ! | ATGTTATTTGAGTATACTGC+TGG | + | chr7_2:81034463-81034482 | Msa1081220:intron | 30.0% |
| ! | GTTTGGTTGCTTTAACTATA+TGG | + | chr7_2:81034513-81034532 | Msa1081220:intron | 30.0% |
| ! | AACTATATGGTCTTCACTTT+TGG | + | chr7_2:81034526-81034545 | Msa1081220:intron | 30.0% |
| !! | ACTATATGGTCTTCACTTTT+GGG | + | chr7_2:81034527-81034546 | Msa1081220:intron | 30.0% |
| TGTAAAACAGATTAACTGAC+AGG | - | chr7_2:81034573-81034592 | None:intergenic | 30.0% | |
| !! | GCATTTTATATGATGATGAC+AGG | + | chr7_2:81035024-81035043 | Msa1081220:intron | 30.0% |
| ! | TTTATATGATGATGACAGGT+AGG | + | chr7_2:81035028-81035047 | Msa1081220:intron | 30.0% |
| TAATTGGGTGTAACATGATT+GGG | - | chr7_2:81035081-81035100 | None:intergenic | 30.0% | |
| TTAATTGGGTGTAACATGAT+TGG | - | chr7_2:81035082-81035101 | None:intergenic | 30.0% | |
| CCTTCTACAATCTCATTAAT+TGG | - | chr7_2:81035097-81035116 | None:intergenic | 30.0% | |
| CCAATTAATGAGATTGTAGA+AGG | + | chr7_2:81035094-81035113 | Msa1081220:CDS | 30.0% | |
| ! | GAGAAGAGCCAAATAATTTT+AGG | - | chr7_2:81035315-81035334 | None:intergenic | 30.0% |
| ! | GAATGGATTCGTTGCTAAAA+AGG | - | chr7_2:81032710-81032729 | None:intergenic | 35.0% |
| !!! | TGTTTTTTGATTTGGAGAGG+TGG | - | chr7_2:81032738-81032757 | None:intergenic | 35.0% |
| !!! | ACGTGTTTTTTGATTTGGAG+AGG | - | chr7_2:81032741-81032760 | None:intergenic | 35.0% |
| !!! | GAAGCACGTGTTTTTTGATT+TGG | - | chr7_2:81032746-81032765 | None:intergenic | 35.0% |
| TTAGATACTAACACGCAACT+GGG | - | chr7_2:81032850-81032869 | None:intergenic | 35.0% | |
| ATTAGATACTAACACGCAAC+TGG | - | chr7_2:81032851-81032870 | None:intergenic | 35.0% | |
| !! | GCTCTTTTGGAAGATAACAA+AGG | - | chr7_2:81032901-81032920 | None:intergenic | 35.0% |
| !!! | TTGAAGCTTTGAAGCTCTTT+TGG | - | chr7_2:81032914-81032933 | None:intergenic | 35.0% |
| AGCTTCAAAGCTTCAAACTT+TGG | + | chr7_2:81032918-81032937 | Msa1081220:CDS | 35.0% | |
| GCTTCAAAGCTTCAAACTTT+GGG | + | chr7_2:81032919-81032938 | Msa1081220:CDS | 35.0% | |
| CTTCAAAGCTTCAAACTTTG+GGG | + | chr7_2:81032920-81032939 | Msa1081220:CDS | 35.0% | |
| ATTGTTACTGTAGTTGGAAC+TGG | + | chr7_2:81032949-81032968 | Msa1081220:CDS | 35.0% | |
| ! | AAGTAGGAGCATGCAATAAT+AGG | - | chr7_2:81033055-81033074 | None:intergenic | 35.0% |
| GCATAGAATTTGATTCAGGT+AGG | + | chr7_2:81033177-81033196 | Msa1081220:intron | 35.0% | |
| CGTGATGCATTTATTGATCT+TGG | + | chr7_2:81033469-81033488 | Msa1081220:intron | 35.0% | |
| TCCGAGTTTCATTATATGCA+GGG | + | chr7_2:81033576-81033595 | Msa1081220:intron | 35.0% | |
| TCCCTGCATATAATGAAACT+CGG | - | chr7_2:81033580-81033599 | None:intergenic | 35.0% | |
| ATGCTAGTACCAGTTGAAAT+TGG | + | chr7_2:81033875-81033894 | Msa1081220:CDS | 35.0% | |
| TGCTAGTACCAGTTGAAATT+GGG | + | chr7_2:81033876-81033895 | Msa1081220:CDS | 35.0% | |
| ! | ATGGGTTTTCGTTTAGAGAA+AGG | + | chr7_2:81034014-81034033 | Msa1081220:CDS | 35.0% |
| ! | GTTTTCGTTTAGAGAAAGGA+CGG | + | chr7_2:81034018-81034037 | Msa1081220:CDS | 35.0% |
| !!! | CATGGCTGTTTTTTGTTTTG+AGG | + | chr7_2:81034081-81034100 | Msa1081220:CDS | 35.0% |
| !!! | TGGCTGTTTTTTGTTTTGAG+GGG | + | chr7_2:81034083-81034102 | Msa1081220:CDS | 35.0% |
| !!! | GTTTTTTGTTTTGAGGGGTT+TGG | + | chr7_2:81034088-81034107 | Msa1081220:CDS | 35.0% |
| AGCTAAATTCCCAAAATTGC+TGG | + | chr7_2:81034147-81034166 | Msa1081220:CDS | 35.0% | |
| !!! | TTTTGGGTTATGTGGTTACA+TGG | + | chr7_2:81034207-81034226 | Msa1081220:CDS | 35.0% |
| ! | TTATGTGGTTACATGGCTTT+TGG | + | chr7_2:81034214-81034233 | Msa1081220:CDS | 35.0% |
| ATTAAGAGTCACAATGTCTC+TGG | - | chr7_2:81034248-81034267 | None:intergenic | 35.0% | |
| !! | TTTGGGTTGTATGTGTCAAT+TGG | + | chr7_2:81034544-81034563 | Msa1081220:intron | 35.0% |
| GTAGCACATATTATGTGCAT+TGG | + | chr7_2:81034761-81034780 | Msa1081220:intron | 35.0% | |
| ATATTATGAACTCCTGGCAA+TGG | - | chr7_2:81034946-81034965 | None:intergenic | 35.0% | |
| GAAGTCAAACATTGACCAAT+AGG | - | chr7_2:81035002-81035021 | None:intergenic | 35.0% | |
| !! | AAAAGAAAGCATTGCACACA+AGG | - | chr7_2:81035272-81035291 | None:intergenic | 35.0% |
| !! | AATTTTAGGTGAAATGTGGC+TGG | - | chr7_2:81035301-81035320 | None:intergenic | 35.0% |
| GGAACTTACAACACAATTGT+TGG | + | chr7_2:81035400-81035419 | Msa1081220:CDS | 35.0% | |
| TTGGAGAGGTGGAAAATGAA+TGG | - | chr7_2:81032727-81032746 | None:intergenic | 40.0% | |
| TAGATACTAACACGCAACTG+GGG | - | chr7_2:81032849-81032868 | None:intergenic | 40.0% | |
| ! | TGTAGTTGGAACTGGTGTTT+TGG | + | chr7_2:81032957-81032976 | Msa1081220:CDS | 40.0% |
| ! | GTAGTTGGAACTGGTGTTTT+GGG | + | chr7_2:81032958-81032977 | Msa1081220:CDS | 40.0% |
| !! | TGGGTTTACCCTTTGCTTTT+CGG | + | chr7_2:81032977-81032996 | Msa1081220:CDS | 40.0% |
| TTATTGCATGCTCCTACTTG+TGG | + | chr7_2:81033056-81033075 | Msa1081220:intron | 40.0% | |
| TATTGCATGCTCCTACTTGT+GGG | + | chr7_2:81033057-81033076 | Msa1081220:intron | 40.0% | |
| TAGAAAGATGACCCACAAGT+AGG | - | chr7_2:81033071-81033090 | None:intergenic | 40.0% | |
| ! | TGTTGTGTACTTCACTGACT+TGG | + | chr7_2:81033354-81033373 | Msa1081220:intron | 40.0% |
| CTCCGAGTTTCATTATATGC+AGG | + | chr7_2:81033575-81033594 | Msa1081220:intron | 40.0% | |
| ! | GTTCTTGAGTTGTCATTGCA+TGG | + | chr7_2:81033605-81033624 | Msa1081220:intron | 40.0% |
| ATCAAGATCTTATGGAGACC+TGG | + | chr7_2:81033697-81033716 | Msa1081220:CDS | 40.0% | |
| TCAAGATCTTATGGAGACCT+GGG | + | chr7_2:81033698-81033717 | Msa1081220:CDS | 40.0% | |
| ! | TTCCAAAGCATCTATAACCC+AGG | - | chr7_2:81033718-81033737 | None:intergenic | 40.0% |
| ! | CAAGCGATGGTCCATATTTT+TGG | - | chr7_2:81033841-81033860 | None:intergenic | 40.0% |
| CATGACATCCCAATTTCAAC+TGG | - | chr7_2:81033887-81033906 | None:intergenic | 40.0% | |
| CAGTTGAAATTGGGATGTCA+TGG | + | chr7_2:81033885-81033904 | Msa1081220:CDS | 40.0% | |
| GAAATTGGGATGTCATGGAT+AGG | + | chr7_2:81033890-81033909 | Msa1081220:CDS | 40.0% | |
| TCACTACAATTCCCATAGCT+AGG | - | chr7_2:81033967-81033986 | None:intergenic | 40.0% | |
| AGCTATGGGAATTGTAGTGA+AGG | + | chr7_2:81033967-81033986 | Msa1081220:CDS | 40.0% | |
| AAACGAAAACCCATCCTCTA+AGG | - | chr7_2:81034008-81034027 | None:intergenic | 40.0% | |
| TGCCCTAGAGAATTCTATGA+AGG | + | chr7_2:81034120-81034139 | Msa1081220:CDS | 40.0% | |
| ! | AAGTCTGAGCCAGCAATTTT+GGG | - | chr7_2:81034159-81034178 | None:intergenic | 40.0% |
| ! | AAAGTCTGAGCCAGCAATTT+TGG | - | chr7_2:81034160-81034179 | None:intergenic | 40.0% |
| TTGTGACTCTTAATCTCCCT+AGG | + | chr7_2:81034254-81034273 | Msa1081220:CDS | 40.0% | |
| ! | TGAACAAAGAGCATGAGAAG+AGG | - | chr7_2:81034439-81034458 | None:intergenic | 40.0% |
| !! | TTGAAGGTGATGATGGTGTT+TGG | + | chr7_2:81034496-81034515 | Msa1081220:intron | 40.0% |
| TTGTCTATGTGGTCACATGT+TGG | + | chr7_2:81034629-81034648 | Msa1081220:intron | 40.0% | |
| TAGTTGTGTATGTCCTGCTT+TGG | + | chr7_2:81034738-81034757 | Msa1081220:intron | 40.0% | |
| AGTTGTGTATGTCCTGCTTT+GGG | + | chr7_2:81034739-81034758 | Msa1081220:intron | 40.0% | |
| TAATATGTGCTACCCAAAGC+AGG | - | chr7_2:81034754-81034773 | None:intergenic | 40.0% | |
| GGCAAACCAATTATGTGCAT+TGG | + | chr7_2:81034826-81034845 | Msa1081220:intron | 40.0% | |
| ! | ATACATCAGTCGTGCTATTG+TGG | + | chr7_2:81035177-81035196 | Msa1081220:CDS | 40.0% |
| GCTTCATTTGTGCCAGAATT+TGG | + | chr7_2:81035220-81035239 | Msa1081220:CDS | 40.0% | |
| GAGGCAAATACACCAAATTC+TGG | - | chr7_2:81035235-81035254 | None:intergenic | 40.0% | |
| TGGTGTATTTGCCTCATTTG+TGG | + | chr7_2:81035240-81035259 | Msa1081220:CDS | 40.0% | |
| GGTGTATTTGCCTCATTTGT+GGG | + | chr7_2:81035241-81035260 | Msa1081220:CDS | 40.0% | |
| GTGTATTTGCCTCATTTGTG+GGG | + | chr7_2:81035242-81035261 | Msa1081220:CDS | 40.0% | |
| CCAGCAATCCGAAAAGCAAA+GGG | - | chr7_2:81032988-81033007 | None:intergenic | 45.0% | |
| ACCAGCAATCCGAAAAGCAA+AGG | - | chr7_2:81032989-81033008 | None:intergenic | 45.0% | |
| !! | TTGCTTTTCGGATTGCTGGT+TGG | + | chr7_2:81032989-81033008 | Msa1081220:CDS | 45.0% |
| !! | TGCTTTTCGGATTGCTGGTT+GGG | + | chr7_2:81032990-81033009 | Msa1081220:CDS | 45.0% |
| GGCTATAGCTCAGATAGCTT+TGG | + | chr7_2:81033210-81033229 | Msa1081220:intron | 45.0% | |
| GCATCACGCATAATAATGGC+AGG | - | chr7_2:81033457-81033476 | None:intergenic | 45.0% | |
| !! | CTCAGCCATCGATTTCAGAT+CGG | - | chr7_2:81033537-81033556 | None:intergenic | 45.0% |
| !! | GGTTTGGTGCAGAGATAAGT+TGG | + | chr7_2:81033652-81033671 | Msa1081220:intron | 45.0% |
| GACCTGGGTTATAGATGCTT+TGG | + | chr7_2:81033713-81033732 | Msa1081220:CDS | 45.0% | |
| TGCAGGATCTGTTGCGTATT+TGG | + | chr7_2:81033784-81033803 | Msa1081220:CDS | 45.0% | |
| AATATGTAGGAGGCAAGCGA+TGG | - | chr7_2:81033854-81033873 | None:intergenic | 45.0% | |
| TGTGTGCAATGTCCTAGCTA+TGG | + | chr7_2:81033952-81033971 | Msa1081220:CDS | 45.0% | |
| GTGTGCAATGTCCTAGCTAT+GGG | + | chr7_2:81033953-81033972 | Msa1081220:CDS | 45.0% | |
| AGTGAAGGAAGATGTACGAG+TGG | + | chr7_2:81033982-81034001 | Msa1081220:CDS | 45.0% | |
| !!! | TTGCTGGCTCAGACTTTTAG+TGG | + | chr7_2:81034163-81034182 | Msa1081220:CDS | 45.0% |
| CATCATCACCTTCAAGCACT+AGG | - | chr7_2:81034491-81034510 | None:intergenic | 45.0% | |
| CTAGTGCTTGAAGGTGATGA+TGG | + | chr7_2:81034489-81034508 | Msa1081220:intron | 45.0% | |
| ACGCTTCGTGGACAGAATTT+AGG | - | chr7_2:81034605-81034624 | None:intergenic | 45.0% | |
| ATAGACAAACACACGCTTCG+TGG | - | chr7_2:81034617-81034636 | None:intergenic | 45.0% | |
| GAAGCGTGTGTTTGTCTATG+TGG | + | chr7_2:81034618-81034637 | Msa1081220:intron | 45.0% | |
| GAACGTGCTTGTAAGCATGT+TGG | - | chr7_2:81034682-81034701 | None:intergenic | 45.0% | |
| ! | TGGTTTGCCGTAGACATCTA+AGG | - | chr7_2:81034815-81034834 | None:intergenic | 45.0% |
| ATGAGAAAGCTTCCATTGCC+AGG | + | chr7_2:81034931-81034950 | Msa1081220:intron | 45.0% | |
| TTCTCTATGCCTCTGGCAAA+AGG | + | chr7_2:81035330-81035349 | Msa1081220:CDS | 45.0% | |
| ! | AATCAAGGACCTTTTGCCAG+AGG | - | chr7_2:81035342-81035361 | None:intergenic | 45.0% |
| !! | CCCTTTGCTTTTCGGATTGC+TGG | + | chr7_2:81032985-81033004 | Msa1081220:CDS | 50.0% |
| !! | TCGCTTGGTGTTGCTATCGT+TGG | + | chr7_2:81033021-81033040 | Msa1081220:CDS | 50.0% |
| ! | GTCGACCGATCTGAAATCGA+TGG | + | chr7_2:81033529-81033548 | Msa1081220:intron | 50.0% |
| !! | GATGCTTTGGAACATTCGGC+CGG | + | chr7_2:81033726-81033745 | Msa1081220:CDS | 50.0% |
| ATCGTGGTAGCACAATGTGC+AGG | + | chr7_2:81033767-81033786 | Msa1081220:CDS | 50.0% | |
| ! | AGATGTACGAGTGGCCTTAG+AGG | + | chr7_2:81033991-81034010 | Msa1081220:CDS | 50.0% |
| ! | TACGAGTGGCCTTAGAGGAT+GGG | + | chr7_2:81033996-81034015 | Msa1081220:CDS | 50.0% |
| ACGGCAATCACGTCGAACAT+TGG | + | chr7_2:81034037-81034056 | Msa1081220:CDS | 50.0% | |
| CGGCAATCACGTCGAACATT+GGG | + | chr7_2:81034038-81034057 | Msa1081220:CDS | 50.0% | |
| GGCAATCACGTCGAACATTG+GGG | + | chr7_2:81034039-81034058 | Msa1081220:CDS | 50.0% | |
| GCAATCACGTCGAACATTGG+GGG | + | chr7_2:81034040-81034059 | Msa1081220:CDS | 50.0% | |
| CAATCACGTCGAACATTGGG+GGG | + | chr7_2:81034041-81034060 | Msa1081220:CDS | 50.0% | |
| CTCTTAATCTCCCTAGGAGC+TGG | + | chr7_2:81034260-81034279 | Msa1081220:CDS | 50.0% | |
| CAAGAGATGACCAGCTCCTA+GGG | - | chr7_2:81034273-81034292 | None:intergenic | 50.0% | |
| TGCTGGTACCTAGTGCTTGA+AGG | + | chr7_2:81034480-81034499 | Msa1081220:intron | 50.0% | |
| ATGACAGGTAGGATTGTGCC+TGG | + | chr7_2:81035039-81035058 | Msa1081220:intron | 50.0% | |
| TGACAGGTAGGATTGTGCCT+GGG | + | chr7_2:81035040-81035059 | Msa1081220:intron | 50.0% | |
| GGAATGTGAACATAAGCCCC+AGG | - | chr7_2:81035060-81035079 | None:intergenic | 50.0% | |
| ! | CATCAGTCGTGCTATTGTGG+TGG | + | chr7_2:81035180-81035199 | Msa1081220:CDS | 50.0% |
| TGCTATTGTGGTGGTTGTGC+TGG | + | chr7_2:81035189-81035208 | Msa1081220:CDS | 50.0% | |
| ! | CAAGGTACTCCCCACAAATG+AGG | - | chr7_2:81035254-81035273 | None:intergenic | 50.0% |
| ! | TTGGCTCTTCTCTATGCCTC+TGG | + | chr7_2:81035323-81035342 | Msa1081220:CDS | 50.0% |
| GGCATCAGAAGAGCCGTTAG+TGG | + | chr7_2:81033673-81033692 | Msa1081220:CDS | 55.0% | |
| ! | GTACGAGTGGCCTTAGAGGA+TGG | + | chr7_2:81033995-81034014 | Msa1081220:CDS | 55.0% |
| ! | GTTGCCATTTGCAGCAGGCA+TGG | + | chr7_2:81034063-81034082 | Msa1081220:CDS | 55.0% |
| ACAGCCATGCCTGCTGCAAA+TGG | - | chr7_2:81034070-81034089 | None:intergenic | 55.0% | |
| GCAAGAGATGACCAGCTCCT+AGG | - | chr7_2:81034274-81034293 | None:intergenic | 55.0% | |
| CTGGTCATCTCTTGCCGTAC+AGG | + | chr7_2:81034279-81034298 | Msa1081220:CDS | 55.0% | |
| TTGGACACGAAGCCTTGCAG+TGG | + | chr7_2:81034648-81034667 | Msa1081220:intron | 55.0% | |
| TTGGACTCAACGCCACTGCA+AGG | - | chr7_2:81034663-81034682 | None:intergenic | 55.0% | |
| GACAGGTAGGATTGTGCCTG+GGG | + | chr7_2:81035041-81035060 | Msa1081220:intron | 55.0% | |
| ! | CGGATTGCTGGTTGGGTTGC+TGG | + | chr7_2:81032997-81033016 | Msa1081220:CDS | 60.0% |
| !! | GGTTGGGTTGCTGGCTCGCT+TGG | + | chr7_2:81033006-81033025 | Msa1081220:CDS | 65.0% |
| ! | GGGGGGTTGCCATTTGCAGC+AGG | + | chr7_2:81034058-81034077 | Msa1081220:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 81032639 | 81035541 | 81032639 | ID=Msa1081220;Name=Msa1081220 |
| chr7_2 | mRNA | 81032639 | 81035541 | 81032639 | ID=Msa1081220-mRNA-1;Parent=Msa1081220;Name=Msa1081220-mRNA-1;_AED=0.08;_eAED=0.08;_QI=244|1|1|1|1|1|3|112|407 |
| chr7_2 | exon | 81032639 | 81033074 | 81032639 | ID=Msa1081220-mRNA-1:exon:20628;Parent=Msa1081220-mRNA-1 |
| chr7_2 | exon | 81033653 | 81034300 | 81033653 | ID=Msa1081220-mRNA-1:exon:20629;Parent=Msa1081220-mRNA-1 |
| chr7_2 | exon | 81035046 | 81035541 | 81035046 | ID=Msa1081220-mRNA-1:exon:20630;Parent=Msa1081220-mRNA-1 |
| chr7_2 | five_prime_UTR | 81032639 | 81032882 | 81032639 | ID=Msa1081220-mRNA-1:five_prime_utr;Parent=Msa1081220-mRNA-1 |
| chr7_2 | CDS | 81032883 | 81033074 | 81032883 | ID=Msa1081220-mRNA-1:cds;Parent=Msa1081220-mRNA-1 |
| chr7_2 | CDS | 81033653 | 81034300 | 81033653 | ID=Msa1081220-mRNA-1:cds;Parent=Msa1081220-mRNA-1 |
| chr7_2 | CDS | 81035046 | 81035429 | 81035046 | ID=Msa1081220-mRNA-1:cds;Parent=Msa1081220-mRNA-1 |
| chr7_2 | three_prime_UTR | 81035430 | 81035541 | 81035430 | ID=Msa1081220-mRNA-1:three_prime_utr;Parent=Msa1081220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
