Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107100 | XP_003623150.1 | 91.875 | 320 | 5 | 1 | 1 | 299 | 1 | 320 | 0.0 | 592 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107100 | sp|Q54MZ4|MCFB_DICDI | 37.954 | 303 | 149 | 9 | 25 | 298 | 142 | 434 | 5.98e-56 | 189 |
| Msa1107100 | sp|Q54MZ4|MCFB_DICDI | 31.658 | 199 | 113 | 5 | 13 | 195 | 233 | 424 | 2.64e-19 | 90.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107100 | G7L5K1 | 91.875 | 320 | 5 | 1 | 1 | 299 | 1 | 320 | 0.0 | 592 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011960 | Msa1107100 | 0.816564 | 5.181829e-52 | -8.615850e-47 |
| Msa0044540 | Msa1107100 | -0.807391 | 5.172497e-50 | -8.615850e-47 |
| Msa0054440 | Msa1107100 | 0.801854 | 7.397513e-49 | -8.615850e-47 |
| Msa0054480 | Msa1107100 | 0.811487 | 6.830545e-51 | -8.615850e-47 |
| Msa0061080 | Msa1107100 | 0.800274 | 1.556176e-48 | -8.615850e-47 |
| Msa0075500 | Msa1107100 | 0.805422 | 1.345357e-49 | -8.615850e-47 |
| Msa0075880 | Msa1107100 | 0.810859 | 9.347703e-51 | -8.615850e-47 |
| Msa0091210 | Msa1107100 | -0.808587 | 2.878297e-50 | -8.615850e-47 |
| Msa0101700 | Msa1107100 | 0.847683 | 9.902861e-60 | -8.615850e-47 |
| Msa0101710 | Msa1107100 | 0.806876 | 6.647283e-50 | -8.615850e-47 |
| Msa0105620 | Msa1107100 | 0.801462 | 8.904195e-49 | -8.615850e-47 |
| Msa0607540 | Msa1107100 | 0.801001 | 1.106349e-48 | -8.615850e-47 |
| Msa0610430 | Msa1107100 | 0.816655 | 4.943422e-52 | -8.615850e-47 |
| Msa0613440 | Msa1107100 | 0.812303 | 4.538276e-51 | -8.615850e-47 |
| Msa0617640 | Msa1107100 | 0.811254 | 7.676943e-51 | -8.615850e-47 |
| Msa0625720 | Msa1107100 | 0.808806 | 2.584925e-50 | -8.615850e-47 |
| Msa0654010 | Msa1107100 | 0.802653 | 5.064744e-49 | -8.615850e-47 |
| Msa0657610 | Msa1107100 | 0.806992 | 6.282883e-50 | -8.615850e-47 |
| Msa0661190 | Msa1107100 | -0.814309 | 1.645075e-51 | -8.615850e-47 |
| Msa0663390 | Msa1107100 | 0.805766 | 1.138972e-49 | -8.615850e-47 |
| Msa0692830 | Msa1107100 | 0.814625 | 1.400858e-51 | -8.615850e-47 |
| Msa0693380 | Msa1107100 | 0.806073 | 9.820652e-50 | -8.615850e-47 |
| Msa0711780 | Msa1107100 | 0.827037 | 1.951906e-54 | -8.615850e-47 |
| Msa0711790 | Msa1107100 | 0.803136 | 4.026127e-49 | -8.615850e-47 |
| Msa0715700 | Msa1107100 | 0.813339 | 2.691058e-51 | -8.615850e-47 |
| Msa0762970 | Msa1107100 | 0.807341 | 5.299538e-50 | -8.615850e-47 |
| Msa0773840 | Msa1107100 | 0.808808 | 2.581706e-50 | -8.615850e-47 |
| Msa0790660 | Msa1107100 | -0.801078 | 1.066756e-48 | -8.615850e-47 |
| Msa0794670 | Msa1107100 | 0.817619 | 3.002730e-52 | -8.615850e-47 |
| Msa0816700 | Msa1107100 | 0.832762 | 7.854262e-56 | -8.615850e-47 |
| Msa0827350 | Msa1107100 | -0.807669 | 4.516056e-50 | -8.615850e-47 |
| Msa0830540 | Msa1107100 | 0.801428 | 9.046782e-49 | -8.615850e-47 |
| Msa0831850 | Msa1107100 | 0.818778 | 1.641002e-52 | -8.615850e-47 |
| Msa0835800 | Msa1107100 | 0.801809 | 7.557400e-49 | -8.615850e-47 |
| Msa0123360 | Msa1107100 | 0.813407 | 2.599752e-51 | -8.615850e-47 |
| Msa0128020 | Msa1107100 | 0.802173 | 6.359853e-49 | -8.615850e-47 |
| Msa0136070 | Msa1107100 | 0.819704 | 1.009841e-52 | -8.615850e-47 |
| Msa0136100 | Msa1107100 | 0.801806 | 7.567731e-49 | -8.615850e-47 |
| Msa0150820 | Msa1107100 | 0.815450 | 9.185722e-52 | -8.615850e-47 |
| Msa0160550 | Msa1107100 | 0.820720 | 5.908687e-53 | -8.615850e-47 |
| Msa0168230 | Msa1107100 | 0.817654 | 2.948415e-52 | -8.615850e-47 |
| Msa0197660 | Msa1107100 | 0.845092 | 5.038071e-59 | -8.615850e-47 |
| Msa0222890 | Msa1107100 | 0.807709 | 4.428476e-50 | -8.615850e-47 |
| Msa0383800 | Msa1107100 | 0.838141 | 3.430844e-57 | -8.615850e-47 |
| Msa0397750 | Msa1107100 | 0.812491 | 4.127070e-51 | -8.615850e-47 |
| Msa0412840 | Msa1107100 | 0.821261 | 4.435176e-53 | -8.615850e-47 |
| Msa0434180 | Msa1107100 | 0.822524 | 2.261915e-53 | -8.615850e-47 |
| Msa0445280 | Msa1107100 | 0.810393 | 1.178508e-50 | -8.615850e-47 |
| Msa0457510 | Msa1107100 | 0.804061 | 2.588590e-49 | -8.615850e-47 |
| Msa0479970 | Msa1107100 | 0.801336 | 9.449549e-49 | -8.615850e-47 |
| Msa0481530 | Msa1107100 | 0.803263 | 3.789242e-49 | -8.615850e-47 |
| Msa1003320 | Msa1107100 | 0.801183 | 1.015616e-48 | -8.615850e-47 |
| Msa1003620 | Msa1107100 | 0.825870 | 3.702274e-54 | -8.615850e-47 |
| Msa1006850 | Msa1107100 | 0.800707 | 1.270116e-48 | -8.615850e-47 |
| Msa1012830 | Msa1107100 | 0.803963 | 2.712576e-49 | -8.615850e-47 |
| Msa1014540 | Msa1107100 | 0.811024 | 8.611134e-51 | -8.615850e-47 |
| Msa1023120 | Msa1107100 | 0.824734 | 6.874494e-54 | -8.615850e-47 |
| Msa1046460 | Msa1107100 | 0.816893 | 4.371526e-52 | -8.615850e-47 |
| Msa1061680 | Msa1107100 | 0.865846 | 4.390762e-65 | -8.615850e-47 |
| Msa1082500 | Msa1107100 | 0.805918 | 1.058409e-49 | -8.615850e-47 |
| Msa1089040 | Msa1107100 | 0.803880 | 2.821868e-49 | -8.615850e-47 |
| Msa1107100 | Msa1124540 | -0.810018 | 1.419663e-50 | -8.615850e-47 |
| Msa1107100 | Msa1150660 | 0.865155 | 7.247840e-65 | -8.615850e-47 |
| Msa1107100 | Msa1154280 | 0.838911 | 2.170035e-57 | -8.615850e-47 |
| Msa1107100 | Msa1174040 | 0.800976 | 1.119172e-48 | -8.615850e-47 |
| Msa1107100 | Msa1181250 | 0.824787 | 6.679373e-54 | -8.615850e-47 |
| Msa1107100 | Msa1181330 | 0.818956 | 1.494973e-52 | -8.615850e-47 |
| Msa1107100 | Msa1186950 | -0.822147 | 2.767017e-53 | -8.615850e-47 |
| Msa1107100 | Msa1204530 | 0.801823 | 7.507496e-49 | -8.615850e-47 |
| Msa1107100 | Msa1208880 | 0.803688 | 3.093290e-49 | -8.615850e-47 |
| Msa1107100 | Msa1224810 | 0.806579 | 7.682685e-50 | -8.615850e-47 |
| Msa1107100 | Msa1241130 | -0.810883 | 9.237376e-51 | -8.615850e-47 |
| Msa1107100 | Msa1245930 | 0.807005 | 6.244011e-50 | -8.615850e-47 |
| Msa1107100 | Msa1249490 | 0.811368 | 7.248546e-51 | -8.615850e-47 |
| Msa1107100 | Msa1259060 | 0.807325 | 5.340850e-50 | -8.615850e-47 |
| Msa1107100 | Msa1276440 | 0.808201 | 3.478521e-50 | -8.615850e-47 |
| Msa1107100 | Msa1279210 | 0.802947 | 4.405907e-49 | -8.615850e-47 |
| Msa1107100 | Msa1282580 | -0.817495 | 3.200975e-52 | -8.615850e-47 |
| Msa1107100 | Msa1287460 | 0.828021 | 1.133418e-54 | -8.615850e-47 |
| Msa1107100 | Msa1358250 | 0.800518 | 1.388132e-48 | -8.615850e-47 |
| Msa1107100 | Msa1359040 | 0.803270 | 3.777148e-49 | -8.615850e-47 |
| Msa1107100 | Msa1369530 | 0.812681 | 3.752085e-51 | -8.615850e-47 |
| Msa1107100 | Msa1392780 | 0.812858 | 3.430768e-51 | -8.615850e-47 |
| Msa1107100 | Msa1403340 | 0.825912 | 3.617636e-54 | -8.615850e-47 |
| Msa1107100 | Msa1416150 | 0.805336 | 1.402055e-49 | -8.615850e-47 |
| Msa1107100 | Msa1424750 | 0.819695 | 1.014588e-52 | -8.615850e-47 |
| Msa1107100 | Msa1430680 | 0.811548 | 6.624821e-51 | -8.615850e-47 |
| Msa1107100 | Msa1454620 | 0.805440 | 1.333380e-49 | -8.615850e-47 |
| Msa1107100 | Msa1455490 | 0.816136 | 6.461162e-52 | -8.615850e-47 |
| Msa1107100 | Msa1466540 | 0.816741 | 4.728549e-52 | -8.615850e-47 |
| Msa0239800 | Msa1107100 | 0.846355 | 2.287760e-59 | -8.615850e-47 |
| Msa0260680 | Msa1107100 | 0.822627 | 2.140903e-53 | -8.615850e-47 |
| Msa0265380 | Msa1107100 | 0.803083 | 4.127835e-49 | -8.615850e-47 |
| Msa0277820 | Msa1107100 | 0.826518 | 2.596224e-54 | -8.615850e-47 |
| Msa0279220 | Msa1107100 | 0.801614 | 8.286646e-49 | -8.615850e-47 |
| Msa0279240 | Msa1107100 | 0.802852 | 4.608840e-49 | -8.615850e-47 |
| Msa0280090 | Msa1107100 | 0.800516 | 1.389596e-48 | -8.615850e-47 |
| Msa0317510 | Msa1107100 | 0.838508 | 2.758395e-57 | -8.615850e-47 |
| Msa0318980 | Msa1107100 | 0.825514 | 4.497195e-54 | -8.615850e-47 |
| Msa0319170 | Msa1107100 | 0.801642 | 8.177339e-49 | -8.615850e-47 |
| Msa0337620 | Msa1107100 | 0.810264 | 1.256590e-50 | -8.615850e-47 |
| Msa0340450 | Msa1107100 | 0.807494 | 4.918305e-50 | -8.615850e-47 |
| Msa0344830 | Msa1107100 | 0.823764 | 1.161659e-53 | -8.615850e-47 |
| Msa0351030 | Msa1107100 | 0.806307 | 8.767804e-50 | -8.615850e-47 |
| Msa0357760 | Msa1107100 | 0.805456 | 1.323624e-49 | -8.615850e-47 |
| Msa0357790 | Msa1107100 | 0.806770 | 7.000325e-50 | -8.615850e-47 |
| Msa0357830 | Msa1107100 | 0.811413 | 7.090038e-51 | -8.615850e-47 |
| Msa0357840 | Msa1107100 | 0.803666 | 3.126495e-49 | -8.615850e-47 |
| Msa0483850 | Msa1107100 | 0.813599 | 2.359118e-51 | -8.615850e-47 |
| Msa0512750 | Msa1107100 | 0.817351 | 3.450254e-52 | -8.615850e-47 |
| Msa0529890 | Msa1107100 | 0.806438 | 8.223879e-50 | -8.615850e-47 |
| Msa0542090 | Msa1107100 | 0.802575 | 5.256511e-49 | -8.615850e-47 |
| Msa0542130 | Msa1107100 | 0.805168 | 1.520782e-49 | -8.615850e-47 |
| Msa0558690 | Msa1107100 | 0.808190 | 3.498071e-50 | -8.615850e-47 |
| Msa0585560 | Msa1107100 | 0.800762 | 1.237668e-48 | -8.615850e-47 |
| Msa0842650 | Msa1107100 | 0.811759 | 5.960631e-51 | -8.615850e-47 |
| Msa0886330 | Msa1107100 | -0.811344 | 7.338025e-51 | -8.615850e-47 |
| Msa0913480 | Msa1107100 | -0.835839 | 1.328045e-56 | -8.615850e-47 |
| Msa0923330 | Msa1107100 | 0.802295 | 6.004438e-49 | -8.615850e-47 |
| Msa0947660 | Msa1107100 | 0.805756 | 1.144870e-49 | -8.615850e-47 |
| Msa0959360 | Msa1107100 | 0.807500 | 4.904298e-50 | -8.615850e-47 |
| Msa0973600 | Msa1107100 | 0.832885 | 7.322116e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107100 | MtrunA17_Chr7g0240341 | 91.875 | 320 | 5 | 1 | 1 | 299 | 1 | 320 | 0.0 | 592 |
| Msa1107100 | MtrunA17_Chr5g0436041 | 64.873 | 316 | 89 | 4 | 1 | 294 | 7 | 322 | 8.17e-134 | 382 |
| Msa1107100 | MtrunA17_Chr8g0347451 | 33.224 | 304 | 167 | 7 | 25 | 293 | 51 | 353 | 7.50e-48 | 163 |
| Msa1107100 | MtrunA17_Chr5g0396801 | 35.099 | 302 | 162 | 7 | 25 | 293 | 38 | 338 | 1.20e-47 | 162 |
| Msa1107100 | MtrunA17_Chr1g0149111 | 37.083 | 240 | 142 | 5 | 55 | 293 | 179 | 410 | 3.46e-45 | 158 |
| Msa1107100 | MtrunA17_Chr1g0149111 | 27.568 | 185 | 119 | 5 | 112 | 292 | 138 | 311 | 1.82e-16 | 79.3 |
| Msa1107100 | MtrunA17_Chr1g0149111 | 25.521 | 192 | 121 | 6 | 15 | 191 | 223 | 407 | 1.14e-13 | 70.9 |
| Msa1107100 | MtrunA17_Chr3g0137941 | 35.950 | 242 | 146 | 5 | 53 | 293 | 160 | 393 | 9.30e-43 | 151 |
| Msa1107100 | MtrunA17_Chr3g0137941 | 27.979 | 193 | 124 | 5 | 102 | 290 | 111 | 292 | 1.77e-15 | 76.3 |
| Msa1107100 | MtrunA17_Chr4g0067231 | 32.384 | 281 | 168 | 7 | 33 | 295 | 51 | 327 | 3.57e-42 | 148 |
| Msa1107100 | MtrunA17_Chr4g0067231 | 26.108 | 203 | 126 | 5 | 115 | 297 | 16 | 214 | 4.16e-17 | 80.5 |
| Msa1107100 | MtrunA17_Chr6g0488081 | 32.107 | 299 | 164 | 6 | 24 | 293 | 18 | 306 | 4.19e-42 | 147 |
| Msa1107100 | MtrunA17_Chr4g0063561 | 34.711 | 242 | 148 | 4 | 53 | 293 | 162 | 394 | 2.55e-41 | 147 |
| Msa1107100 | MtrunA17_Chr4g0063561 | 25.000 | 196 | 135 | 4 | 98 | 290 | 108 | 294 | 7.24e-14 | 71.2 |
| Msa1107100 | MtrunA17_Chr7g0242311 | 32.319 | 263 | 156 | 5 | 37 | 297 | 118 | 360 | 1.15e-40 | 145 |
| Msa1107100 | MtrunA17_Chr3g0135861 | 30.968 | 310 | 164 | 9 | 22 | 293 | 32 | 329 | 6.58e-39 | 139 |
| Msa1107100 | MtrunA17_Chr4g0006851 | 33.745 | 243 | 143 | 6 | 57 | 299 | 140 | 364 | 7.41e-39 | 140 |
| Msa1107100 | MtrunA17_Chr4g0006851 | 27.041 | 196 | 117 | 7 | 9 | 191 | 173 | 355 | 2.63e-12 | 66.6 |
| Msa1107100 | MtrunA17_Chr4g0006851 | 29.167 | 168 | 107 | 5 | 133 | 299 | 118 | 274 | 8.05e-12 | 65.1 |
| Msa1107100 | MtrunA17_Chr7g0252401 | 32.292 | 288 | 163 | 9 | 25 | 294 | 207 | 480 | 3.48e-37 | 137 |
| Msa1107100 | MtrunA17_Chr7g0252401 | 30.570 | 193 | 113 | 4 | 14 | 192 | 292 | 477 | 8.82e-20 | 89.4 |
| Msa1107100 | MtrunA17_Chr7g0252401 | 28.070 | 228 | 150 | 4 | 77 | 296 | 167 | 388 | 7.48e-19 | 86.3 |
| Msa1107100 | MtrunA17_Chr3g0131501 | 28.852 | 305 | 191 | 8 | 7 | 294 | 186 | 481 | 7.72e-37 | 137 |
| Msa1107100 | MtrunA17_Chr3g0131501 | 29.130 | 230 | 143 | 7 | 77 | 296 | 165 | 384 | 3.93e-22 | 95.9 |
| Msa1107100 | MtrunA17_Chr8g0385571 | 31.801 | 261 | 153 | 6 | 45 | 294 | 257 | 503 | 1.40e-36 | 136 |
| Msa1107100 | MtrunA17_Chr8g0385571 | 30.769 | 208 | 120 | 5 | 1 | 192 | 301 | 500 | 3.16e-21 | 93.6 |
| Msa1107100 | MtrunA17_Chr8g0385571 | 27.753 | 227 | 150 | 5 | 77 | 296 | 187 | 406 | 9.96e-20 | 89.0 |
| Msa1107100 | MtrunA17_Chr2g0296061 | 31.365 | 271 | 163 | 8 | 44 | 295 | 60 | 326 | 3.87e-36 | 132 |
| Msa1107100 | MtrunA17_Chr2g0296061 | 25.373 | 201 | 128 | 4 | 108 | 290 | 10 | 206 | 1.94e-15 | 75.5 |
| Msa1107100 | MtrunA17_Chr3g0135801 | 30.645 | 248 | 156 | 7 | 54 | 294 | 84 | 322 | 2.00e-29 | 114 |
| Msa1107100 | MtrunA17_Chr3g0135801 | 25.604 | 207 | 135 | 6 | 106 | 295 | 23 | 227 | 6.23e-13 | 68.2 |
| Msa1107100 | MtrunA17_Chr6g0488341 | 30.041 | 243 | 151 | 4 | 53 | 293 | 6 | 231 | 2.68e-29 | 111 |
| Msa1107100 | MtrunA17_Chr8g0382201 | 29.885 | 261 | 152 | 5 | 53 | 293 | 233 | 482 | 3.10e-27 | 110 |
| Msa1107100 | MtrunA17_Chr4g0000261 | 27.451 | 255 | 164 | 6 | 54 | 293 | 105 | 353 | 5.24e-26 | 105 |
| Msa1107100 | MtrunA17_Chr4g0000261 | 29.530 | 149 | 95 | 4 | 53 | 198 | 216 | 357 | 1.17e-11 | 64.7 |
| Msa1107100 | MtrunA17_Chr5g0423111 | 30.556 | 252 | 156 | 6 | 53 | 294 | 64 | 306 | 5.53e-26 | 105 |
| Msa1107100 | MtrunA17_Chr5g0423111 | 32.727 | 165 | 106 | 4 | 129 | 290 | 37 | 199 | 2.35e-15 | 75.5 |
| Msa1107100 | MtrunA17_Chr7g0269701 | 30.038 | 263 | 166 | 7 | 42 | 296 | 57 | 309 | 9.62e-25 | 101 |
| Msa1107100 | MtrunA17_Chr7g0269701 | 33.158 | 190 | 113 | 6 | 115 | 295 | 24 | 208 | 2.74e-16 | 77.8 |
| Msa1107100 | MtrunA17_Chr7g0269701 | 38.202 | 89 | 52 | 2 | 209 | 295 | 23 | 110 | 1.35e-11 | 64.3 |
| Msa1107100 | MtrunA17_Chr6g0463041 | 28.226 | 248 | 130 | 4 | 85 | 293 | 2 | 240 | 1.54e-24 | 99.4 |
| Msa1107100 | MtrunA17_Chr3g0115801 | 27.414 | 321 | 183 | 9 | 5 | 293 | 101 | 403 | 1.84e-24 | 102 |
| Msa1107100 | MtrunA17_Chr7g0275411 | 28.897 | 263 | 162 | 7 | 54 | 298 | 85 | 340 | 1.31e-22 | 95.9 |
| Msa1107100 | MtrunA17_Chr8g0386871 | 27.500 | 280 | 180 | 7 | 26 | 294 | 321 | 588 | 3.07e-22 | 96.7 |
| Msa1107100 | MtrunA17_Chr8g0386871 | 28.342 | 187 | 119 | 4 | 112 | 295 | 319 | 493 | 2.88e-13 | 70.1 |
| Msa1107100 | MtrunA17_Chr3g0126331 | 25.685 | 292 | 185 | 6 | 31 | 298 | 109 | 392 | 9.30e-22 | 94.4 |
| Msa1107100 | MtrunA17_Chr2g0328891 | 28.685 | 251 | 155 | 7 | 54 | 293 | 115 | 352 | 2.24e-21 | 92.8 |
| Msa1107100 | MtrunA17_Chr5g0431531 | 29.200 | 250 | 164 | 3 | 53 | 299 | 81 | 320 | 3.08e-21 | 92.0 |
| Msa1107100 | MtrunA17_Chr5g0431531 | 26.966 | 178 | 121 | 3 | 114 | 290 | 40 | 209 | 2.39e-14 | 72.4 |
| Msa1107100 | MtrunA17_Chr8g0393031 | 26.877 | 253 | 169 | 7 | 53 | 298 | 66 | 309 | 6.65e-21 | 90.9 |
| Msa1107100 | MtrunA17_Chr1g0195101 | 28.629 | 248 | 162 | 6 | 54 | 295 | 67 | 305 | 4.57e-20 | 88.6 |
| Msa1107100 | MtrunA17_Chr1g0195101 | 29.167 | 168 | 111 | 3 | 129 | 290 | 35 | 200 | 9.32e-12 | 64.7 |
| Msa1107100 | MtrunA17_Chr1g0195101 | 28.302 | 159 | 108 | 3 | 47 | 203 | 158 | 312 | 1.12e-11 | 64.3 |
| Msa1107100 | MtrunA17_Chr8g0372531 | 29.921 | 254 | 156 | 7 | 55 | 294 | 61 | 306 | 1.06e-19 | 87.4 |
| Msa1107100 | MtrunA17_Chr8g0372531 | 32.768 | 177 | 113 | 3 | 127 | 299 | 28 | 202 | 1.12e-18 | 84.7 |
| Msa1107100 | MtrunA17_Chr1g0201361 | 27.037 | 270 | 180 | 5 | 26 | 294 | 52 | 305 | 1.35e-19 | 87.0 |
| Msa1107100 | MtrunA17_Chr1g0201361 | 27.083 | 192 | 118 | 4 | 99 | 290 | 37 | 206 | 1.65e-14 | 72.8 |
| Msa1107100 | MtrunA17_Chr1g0201361 | 25.676 | 148 | 104 | 1 | 55 | 202 | 171 | 312 | 4.24e-11 | 62.8 |
| Msa1107100 | MtrunA17_Chr3g0088301 | 28.175 | 252 | 157 | 7 | 53 | 293 | 141 | 379 | 1.10e-18 | 85.5 |
| Msa1107100 | MtrunA17_Chr8g0352031 | 27.668 | 253 | 158 | 7 | 53 | 293 | 116 | 355 | 1.51e-18 | 84.7 |
| Msa1107100 | MtrunA17_Chr1g0196921 | 25.098 | 255 | 166 | 5 | 55 | 296 | 60 | 302 | 1.66e-18 | 84.0 |
| Msa1107100 | MtrunA17_Chr1g0196921 | 30.625 | 160 | 103 | 4 | 118 | 271 | 19 | 176 | 5.55e-12 | 65.1 |
| Msa1107100 | MtrunA17_Chr3g0086811 | 27.758 | 281 | 154 | 10 | 44 | 290 | 63 | 328 | 3.45e-18 | 83.6 |
| Msa1107100 | MtrunA17_Chr3g0086811 | 23.645 | 203 | 135 | 2 | 109 | 291 | 24 | 226 | 1.09e-13 | 70.5 |
| Msa1107100 | MtrunA17_Chr6g0463351 | 28.340 | 247 | 157 | 6 | 60 | 299 | 115 | 348 | 6.28e-18 | 83.2 |
| Msa1107100 | MtrunA17_Chr6g0463351 | 27.711 | 166 | 110 | 4 | 125 | 290 | 79 | 234 | 2.43e-12 | 66.6 |
| Msa1107100 | MtrunA17_Chr4g0028531 | 27.311 | 238 | 156 | 9 | 55 | 283 | 64 | 293 | 1.85e-17 | 81.3 |
| Msa1107100 | MtrunA17_Chr4g0028531 | 27.551 | 196 | 138 | 4 | 100 | 293 | 9 | 202 | 1.71e-13 | 69.7 |
| Msa1107100 | MtrunA17_Chr4g0008061 | 26.022 | 269 | 177 | 7 | 38 | 298 | 48 | 302 | 6.51e-17 | 79.3 |
| Msa1107100 | MtrunA17_Chr4g0004571 | 32.192 | 146 | 94 | 2 | 44 | 188 | 145 | 286 | 5.95e-16 | 76.6 |
| Msa1107100 | MtrunA17_Chr4g0004571 | 29.891 | 184 | 123 | 4 | 112 | 293 | 15 | 194 | 1.08e-15 | 75.9 |
| Msa1107100 | MtrunA17_Chr4g0040341 | 27.888 | 251 | 157 | 7 | 54 | 293 | 124 | 361 | 6.07e-16 | 77.4 |
| Msa1107100 | MtrunA17_Chr8g0383321 | 26.715 | 277 | 176 | 8 | 25 | 295 | 52 | 307 | 9.41e-16 | 76.3 |
| Msa1107100 | MtrunA17_Chr8g0383321 | 25.962 | 208 | 139 | 3 | 1 | 199 | 109 | 310 | 2.24e-13 | 69.3 |
| Msa1107100 | MtrunA17_Chr8g0383321 | 27.451 | 204 | 121 | 5 | 90 | 290 | 28 | 207 | 3.51e-12 | 65.9 |
| Msa1107100 | MtrunA17_Chr7g0219891 | 24.125 | 257 | 175 | 6 | 52 | 294 | 61 | 311 | 1.18e-15 | 75.9 |
| Msa1107100 | MtrunA17_Chr7g0241521 | 23.970 | 267 | 185 | 6 | 38 | 298 | 50 | 304 | 3.12e-15 | 74.7 |
| Msa1107100 | MtrunA17_Chr4g0051841 | 26.630 | 184 | 119 | 4 | 111 | 287 | 27 | 201 | 4.33e-15 | 74.3 |
| Msa1107100 | MtrunA17_Chr6g0455381 | 21.978 | 273 | 192 | 5 | 33 | 292 | 41 | 305 | 1.03e-14 | 73.6 |
| Msa1107100 | MtrunA17_Chr2g0331771 | 30.573 | 157 | 104 | 2 | 33 | 188 | 275 | 427 | 1.79e-14 | 73.2 |
| Msa1107100 | MtrunA17_Chr5g0411411 | 26.131 | 199 | 134 | 4 | 108 | 294 | 4 | 201 | 2.17e-14 | 72.0 |
| Msa1107100 | MtrunA17_Chr8g0343381 | 25.172 | 290 | 178 | 7 | 44 | 297 | 62 | 348 | 3.36e-14 | 72.0 |
| Msa1107100 | MtrunA17_Chr6g0461981 | 27.811 | 169 | 110 | 5 | 129 | 293 | 79 | 239 | 2.24e-13 | 69.7 |
| Msa1107100 | MtrunA17_Chr8g0366791 | 27.835 | 194 | 129 | 4 | 108 | 290 | 4 | 197 | 2.77e-13 | 68.9 |
| Msa1107100 | MtrunA17_Chr8g0366791 | 25.407 | 307 | 186 | 10 | 19 | 293 | 2 | 297 | 1.24e-11 | 64.3 |
| Msa1107100 | MtrunA17_Chr5g0407451 | 26.437 | 174 | 120 | 2 | 114 | 287 | 22 | 187 | 4.80e-13 | 68.2 |
| Msa1107100 | MtrunA17_Chr3g0103681 | 26.295 | 251 | 162 | 6 | 48 | 290 | 60 | 295 | 2.43e-12 | 66.2 |
| Msa1107100 | MtrunA17_Chr8g0385891 | 26.627 | 169 | 112 | 5 | 129 | 293 | 89 | 249 | 5.18e-12 | 65.5 |
| Msa1107100 | MtrunA17_Chr5g0436571 | 24.910 | 277 | 167 | 9 | 54 | 294 | 53 | 324 | 8.20e-12 | 65.1 |
| Msa1107100 | MtrunA17_Chr2g0293621 | 30.405 | 148 | 93 | 5 | 127 | 267 | 43 | 187 | 1.22e-11 | 64.3 |
| Msa1107100 | MtrunA17_Chr3g0133111 | 23.108 | 251 | 177 | 6 | 54 | 296 | 71 | 313 | 2.00e-11 | 63.5 |
| Msa1107100 | MtrunA17_Chr6g0488171 | 32.673 | 101 | 66 | 1 | 195 | 293 | 2 | 102 | 2.24e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107100 | AT3G53940.1 | 66.129 | 310 | 84 | 4 | 6 | 295 | 54 | 362 | 5.16e-146 | 415 |
| Msa1107100 | AT3G53940.1 | 30.457 | 197 | 121 | 4 | 113 | 297 | 73 | 265 | 3.46e-17 | 81.3 |
| Msa1107100 | AT3G55640.1 | 64.078 | 309 | 86 | 3 | 4 | 290 | 17 | 322 | 4.17e-136 | 389 |
| Msa1107100 | AT3G55640.1 | 30.102 | 196 | 113 | 4 | 112 | 291 | 37 | 224 | 1.29e-15 | 76.6 |
| Msa1107100 | AT3G55640.1 | 26.984 | 189 | 115 | 4 | 24 | 195 | 144 | 326 | 5.90e-13 | 68.6 |
| Msa1107100 | AT3G55640.4 | 64.078 | 309 | 86 | 3 | 4 | 290 | 17 | 322 | 4.17e-136 | 389 |
| Msa1107100 | AT3G55640.4 | 30.102 | 196 | 113 | 4 | 112 | 291 | 37 | 224 | 1.29e-15 | 76.6 |
| Msa1107100 | AT3G55640.4 | 26.984 | 189 | 115 | 4 | 24 | 195 | 144 | 326 | 5.90e-13 | 68.6 |
| Msa1107100 | AT2G37890.1 | 57.317 | 328 | 107 | 4 | 1 | 295 | 7 | 334 | 1.68e-130 | 374 |
| Msa1107100 | AT2G37890.1 | 29.767 | 215 | 135 | 3 | 95 | 297 | 27 | 237 | 6.39e-19 | 85.9 |
| Msa1107100 | AT3G53940.2 | 60.851 | 235 | 71 | 4 | 6 | 220 | 54 | 287 | 2.18e-95 | 283 |
| Msa1107100 | AT3G53940.2 | 30.457 | 197 | 121 | 4 | 113 | 297 | 73 | 265 | 1.02e-17 | 82.0 |
| Msa1107100 | AT3G55640.2 | 59.414 | 239 | 72 | 3 | 4 | 220 | 17 | 252 | 1.15e-92 | 275 |
| Msa1107100 | AT3G55640.2 | 30.256 | 195 | 112 | 4 | 113 | 291 | 38 | 224 | 3.47e-16 | 77.0 |
| Msa1107100 | AT3G55640.3 | 59.414 | 239 | 72 | 3 | 4 | 220 | 17 | 252 | 1.15e-92 | 275 |
| Msa1107100 | AT3G55640.3 | 30.256 | 195 | 112 | 4 | 113 | 291 | 38 | 224 | 3.47e-16 | 77.0 |
| Msa1107100 | AT4G01100.1 | 33.882 | 304 | 165 | 8 | 25 | 293 | 42 | 344 | 5.55e-47 | 161 |
| Msa1107100 | AT4G01100.3 | 35.249 | 261 | 149 | 6 | 53 | 293 | 34 | 294 | 2.61e-46 | 158 |
| Msa1107100 | AT4G01100.3 | 31.638 | 177 | 111 | 4 | 125 | 293 | 4 | 178 | 5.03e-19 | 85.9 |
| Msa1107100 | AT5G51050.1 | 35.275 | 309 | 163 | 10 | 7 | 294 | 204 | 496 | 1.54e-44 | 158 |
| Msa1107100 | AT5G51050.1 | 29.787 | 188 | 124 | 3 | 112 | 296 | 222 | 404 | 5.52e-18 | 84.3 |
| Msa1107100 | AT4G01100.2 | 32.390 | 318 | 165 | 9 | 25 | 293 | 42 | 358 | 2.42e-44 | 155 |
| Msa1107100 | AT4G32400.1 | 37.917 | 240 | 140 | 5 | 55 | 293 | 154 | 385 | 7.59e-44 | 154 |
| Msa1107100 | AT4G32400.1 | 27.368 | 190 | 120 | 5 | 15 | 191 | 198 | 382 | 4.92e-15 | 75.1 |
| Msa1107100 | AT4G32400.1 | 24.500 | 200 | 140 | 3 | 102 | 299 | 103 | 293 | 1.48e-14 | 73.9 |
| Msa1107100 | AT3G51870.1 | 34.413 | 247 | 140 | 6 | 55 | 299 | 140 | 366 | 8.58e-41 | 145 |
| Msa1107100 | AT3G51870.1 | 26.697 | 221 | 121 | 9 | 6 | 203 | 172 | 374 | 5.13e-13 | 69.3 |
| Msa1107100 | AT3G51870.1 | 29.870 | 154 | 97 | 5 | 148 | 299 | 132 | 276 | 6.46e-12 | 65.9 |
| Msa1107100 | AT1G14560.1 | 33.206 | 262 | 145 | 7 | 53 | 293 | 68 | 320 | 1.58e-37 | 136 |
| Msa1107100 | AT1G14560.1 | 29.885 | 174 | 110 | 4 | 129 | 290 | 43 | 216 | 1.07e-15 | 76.6 |
| Msa1107100 | AT4G26180.1 | 31.544 | 298 | 164 | 8 | 23 | 290 | 19 | 306 | 1.59e-37 | 136 |
| Msa1107100 | AT5G61810.2 | 30.164 | 305 | 179 | 7 | 7 | 294 | 46 | 333 | 8.09e-37 | 134 |
| Msa1107100 | AT5G01500.1 | 31.687 | 243 | 148 | 4 | 55 | 297 | 168 | 392 | 1.21e-35 | 133 |
| Msa1107100 | AT5G61810.1 | 30.619 | 307 | 175 | 9 | 7 | 294 | 189 | 476 | 1.24e-35 | 134 |
| Msa1107100 | AT3G21390.1 | 32.184 | 261 | 153 | 6 | 48 | 287 | 67 | 324 | 6.08e-35 | 129 |
| Msa1107100 | AT3G21390.1 | 26.368 | 201 | 128 | 4 | 115 | 299 | 21 | 217 | 4.71e-16 | 77.8 |
| Msa1107100 | AT3G21390.2 | 32.184 | 261 | 153 | 6 | 48 | 287 | 89 | 346 | 9.03e-35 | 129 |
| Msa1107100 | AT3G21390.2 | 26.368 | 201 | 128 | 4 | 115 | 299 | 43 | 239 | 6.10e-16 | 77.8 |
| Msa1107100 | AT5G48970.1 | 31.786 | 280 | 165 | 9 | 38 | 295 | 61 | 336 | 2.47e-34 | 127 |
| Msa1107100 | AT5G48970.1 | 28.856 | 201 | 121 | 5 | 115 | 297 | 24 | 220 | 1.06e-18 | 85.5 |
| Msa1107100 | AT5G48970.2 | 31.599 | 269 | 159 | 8 | 48 | 295 | 1 | 265 | 6.12e-34 | 125 |
| Msa1107100 | AT5G64970.1 | 30.063 | 316 | 180 | 6 | 8 | 293 | 118 | 422 | 9.43e-34 | 128 |
| Msa1107100 | AT5G07320.1 | 31.429 | 245 | 145 | 6 | 53 | 291 | 247 | 474 | 1.08e-33 | 129 |
| Msa1107100 | AT5G07320.1 | 31.953 | 169 | 106 | 4 | 129 | 296 | 225 | 385 | 3.83e-18 | 84.7 |
| Msa1107100 | AT5G07320.1 | 28.061 | 196 | 120 | 5 | 11 | 192 | 286 | 474 | 6.42e-15 | 75.1 |
| Msa1107100 | AT4G26180.2 | 30.742 | 283 | 156 | 8 | 23 | 275 | 19 | 291 | 1.16e-32 | 122 |
| Msa1107100 | AT4G26180.2 | 29.101 | 189 | 124 | 2 | 112 | 290 | 20 | 208 | 3.37e-22 | 94.4 |
| Msa1107100 | AT5G64970.2 | 31.835 | 267 | 151 | 5 | 47 | 293 | 43 | 298 | 2.55e-32 | 121 |
| Msa1107100 | AT1G14560.2 | 32.377 | 244 | 135 | 7 | 53 | 275 | 68 | 302 | 2.38e-31 | 119 |
| Msa1107100 | AT1G14560.2 | 29.885 | 174 | 110 | 4 | 129 | 290 | 43 | 216 | 5.26e-16 | 77.4 |
| Msa1107100 | AT1G14560.3 | 34.348 | 230 | 121 | 7 | 85 | 293 | 2 | 222 | 8.59e-31 | 115 |
| Msa1107100 | AT1G14560.3 | 26.882 | 186 | 114 | 4 | 18 | 195 | 52 | 223 | 7.54e-15 | 72.8 |
| Msa1107100 | AT5G64970.3 | 29.866 | 298 | 168 | 6 | 8 | 275 | 118 | 404 | 4.22e-29 | 115 |
| Msa1107100 | AT5G56450.1 | 28.904 | 301 | 178 | 10 | 5 | 294 | 51 | 326 | 2.09e-28 | 112 |
| Msa1107100 | AT1G25380.1 | 29.880 | 251 | 156 | 6 | 48 | 289 | 63 | 302 | 5.56e-28 | 111 |
| Msa1107100 | AT1G25380.1 | 31.111 | 180 | 99 | 6 | 129 | 294 | 37 | 205 | 2.57e-14 | 72.8 |
| Msa1107100 | AT1G25380.1 | 26.087 | 161 | 111 | 4 | 47 | 203 | 159 | 315 | 7.43e-12 | 65.5 |
| Msa1107100 | AT1G25380.2 | 29.880 | 251 | 156 | 6 | 48 | 289 | 63 | 302 | 5.56e-28 | 111 |
| Msa1107100 | AT1G25380.2 | 31.111 | 180 | 99 | 6 | 129 | 294 | 37 | 205 | 2.57e-14 | 72.8 |
| Msa1107100 | AT1G25380.2 | 26.087 | 161 | 111 | 4 | 47 | 203 | 159 | 315 | 7.43e-12 | 65.5 |
| Msa1107100 | AT3G20240.1 | 25.385 | 260 | 175 | 4 | 54 | 299 | 91 | 345 | 2.32e-26 | 106 |
| Msa1107100 | AT1G78180.1 | 28.758 | 306 | 177 | 8 | 19 | 294 | 122 | 416 | 3.42e-25 | 104 |
| Msa1107100 | AT4G27940.1 | 28.409 | 264 | 164 | 6 | 54 | 298 | 155 | 412 | 1.57e-24 | 102 |
| Msa1107100 | AT2G30160.1 | 29.435 | 248 | 158 | 4 | 55 | 295 | 86 | 323 | 1.64e-23 | 98.6 |
| Msa1107100 | AT2G30160.1 | 30.168 | 179 | 114 | 5 | 114 | 290 | 43 | 212 | 2.91e-15 | 75.5 |
| Msa1107100 | AT2G30160.1 | 31.544 | 149 | 97 | 2 | 53 | 196 | 175 | 323 | 2.44e-13 | 69.7 |
| Msa1107100 | AT1G34065.1 | 29.617 | 287 | 163 | 7 | 25 | 299 | 82 | 341 | 1.18e-22 | 96.7 |
| Msa1107100 | AT1G34065.1 | 29.348 | 184 | 104 | 3 | 109 | 290 | 78 | 237 | 1.35e-15 | 76.6 |
| Msa1107100 | AT1G34065.1 | 24.757 | 206 | 140 | 2 | 8 | 204 | 146 | 345 | 1.83e-12 | 67.4 |
| Msa1107100 | AT1G34065.2 | 30.142 | 282 | 168 | 7 | 25 | 299 | 75 | 334 | 1.39e-22 | 96.3 |
| Msa1107100 | AT1G34065.2 | 29.348 | 184 | 104 | 3 | 109 | 290 | 71 | 230 | 1.60e-15 | 76.3 |
| Msa1107100 | AT1G34065.2 | 24.757 | 206 | 140 | 2 | 8 | 204 | 139 | 338 | 1.87e-12 | 67.4 |
| Msa1107100 | AT4G11440.1 | 28.016 | 257 | 169 | 5 | 43 | 294 | 359 | 604 | 2.52e-22 | 97.4 |
| Msa1107100 | AT4G11440.2 | 28.016 | 257 | 169 | 5 | 43 | 294 | 359 | 604 | 2.52e-22 | 97.4 |
| Msa1107100 | AT1G07030.1 | 29.268 | 246 | 160 | 4 | 55 | 296 | 84 | 319 | 1.15e-21 | 93.6 |
| Msa1107100 | AT1G07030.1 | 28.649 | 185 | 121 | 5 | 114 | 296 | 41 | 216 | 3.95e-15 | 75.1 |
| Msa1107100 | AT1G07030.1 | 30.128 | 156 | 103 | 2 | 53 | 204 | 173 | 326 | 4.02e-12 | 66.2 |
| Msa1107100 | AT2G46320.1 | 27.734 | 256 | 154 | 7 | 54 | 290 | 109 | 352 | 7.71e-19 | 85.9 |
| Msa1107100 | AT2G47490.1 | 26.400 | 250 | 168 | 6 | 53 | 296 | 64 | 303 | 2.27e-18 | 84.0 |
| Msa1107100 | AT3G08580.2 | 27.386 | 241 | 151 | 6 | 54 | 282 | 133 | 361 | 2.54e-18 | 84.7 |
| Msa1107100 | AT3G08580.1 | 27.386 | 241 | 151 | 6 | 54 | 282 | 133 | 361 | 2.54e-18 | 84.7 |
| Msa1107100 | AT4G28390.1 | 28.629 | 248 | 153 | 7 | 54 | 290 | 132 | 366 | 4.69e-18 | 84.0 |
| Msa1107100 | AT4G28390.2 | 28.629 | 248 | 153 | 7 | 54 | 290 | 132 | 366 | 4.69e-18 | 84.0 |
| Msa1107100 | AT5G01340.1 | 25.806 | 248 | 168 | 8 | 54 | 292 | 58 | 298 | 1.25e-17 | 82.0 |
| Msa1107100 | AT2G46320.3 | 27.203 | 261 | 159 | 7 | 58 | 299 | 14 | 262 | 1.45e-17 | 80.9 |
| Msa1107100 | AT2G46320.2 | 27.203 | 261 | 159 | 7 | 58 | 299 | 14 | 262 | 1.45e-17 | 80.9 |
| Msa1107100 | AT2G46320.5 | 27.203 | 261 | 159 | 7 | 58 | 299 | 14 | 262 | 1.45e-17 | 80.9 |
| Msa1107100 | AT1G14140.1 | 26.400 | 250 | 161 | 7 | 54 | 292 | 62 | 299 | 1.84e-17 | 81.3 |
| Msa1107100 | AT1G14140.1 | 27.778 | 162 | 108 | 3 | 118 | 270 | 21 | 182 | 2.66e-13 | 69.3 |
| Msa1107100 | AT1G14140.1 | 38.554 | 83 | 51 | 0 | 211 | 293 | 19 | 101 | 8.72e-11 | 62.0 |
| Msa1107100 | AT5G17400.1 | 25.847 | 236 | 160 | 6 | 54 | 282 | 63 | 290 | 4.46e-17 | 80.5 |
| Msa1107100 | AT5G13490.1 | 26.556 | 241 | 153 | 6 | 54 | 282 | 137 | 365 | 5.52e-17 | 80.9 |
| Msa1107100 | AT5G13490.2 | 26.556 | 241 | 153 | 6 | 54 | 282 | 137 | 365 | 5.52e-17 | 80.9 |
| Msa1107100 | AT5G66380.1 | 29.000 | 200 | 135 | 4 | 105 | 299 | 2 | 199 | 1.44e-16 | 79.0 |
| Msa1107100 | AT5G66380.1 | 31.068 | 206 | 116 | 7 | 111 | 298 | 108 | 305 | 1.61e-16 | 79.0 |
| Msa1107100 | AT5G42130.1 | 26.587 | 252 | 168 | 5 | 54 | 299 | 160 | 400 | 4.98e-15 | 75.5 |
| Msa1107100 | AT4G39460.2 | 26.699 | 206 | 128 | 4 | 8 | 200 | 122 | 317 | 8.28e-15 | 73.9 |
| Msa1107100 | AT4G39460.2 | 26.715 | 277 | 174 | 8 | 25 | 294 | 58 | 312 | 1.83e-14 | 73.2 |
| Msa1107100 | AT4G39460.2 | 29.508 | 183 | 103 | 3 | 109 | 289 | 54 | 212 | 5.75e-14 | 71.6 |
| Msa1107100 | AT4G39460.1 | 26.699 | 206 | 128 | 4 | 8 | 200 | 122 | 317 | 8.28e-15 | 73.9 |
| Msa1107100 | AT4G39460.1 | 26.715 | 277 | 174 | 8 | 25 | 294 | 58 | 312 | 1.83e-14 | 73.2 |
| Msa1107100 | AT4G39460.1 | 29.508 | 183 | 103 | 3 | 109 | 289 | 54 | 212 | 5.75e-14 | 71.6 |
| Msa1107100 | AT4G39460.3 | 26.699 | 206 | 128 | 4 | 8 | 200 | 122 | 317 | 8.28e-15 | 73.9 |
| Msa1107100 | AT4G39460.3 | 26.715 | 277 | 174 | 8 | 25 | 294 | 58 | 312 | 1.83e-14 | 73.2 |
| Msa1107100 | AT4G39460.3 | 29.508 | 183 | 103 | 3 | 109 | 289 | 54 | 212 | 5.75e-14 | 71.6 |
| Msa1107100 | AT1G74240.2 | 26.259 | 278 | 167 | 9 | 41 | 291 | 20 | 286 | 2.94e-14 | 72.4 |
| Msa1107100 | AT4G03115.5 | 21.757 | 239 | 175 | 3 | 54 | 292 | 11 | 237 | 4.68e-14 | 70.9 |
| Msa1107100 | AT4G03115.6 | 21.757 | 239 | 175 | 3 | 54 | 292 | 19 | 245 | 5.10e-14 | 70.9 |
| Msa1107100 | AT1G74240.1 | 26.259 | 278 | 167 | 9 | 41 | 291 | 68 | 334 | 5.38e-14 | 72.0 |
| Msa1107100 | AT1G74240.1 | 24.528 | 212 | 137 | 4 | 104 | 292 | 24 | 235 | 1.45e-12 | 67.8 |
| Msa1107100 | AT5G46800.2 | 25.954 | 262 | 171 | 6 | 46 | 293 | 47 | 299 | 6.82e-14 | 71.2 |
| Msa1107100 | AT5G46800.3 | 25.954 | 262 | 171 | 6 | 46 | 293 | 47 | 299 | 6.82e-14 | 71.2 |
| Msa1107100 | AT5G46800.1 | 25.954 | 262 | 171 | 6 | 46 | 293 | 47 | 299 | 6.82e-14 | 71.2 |
| Msa1107100 | AT2G17270.1 | 24.419 | 172 | 122 | 2 | 116 | 287 | 25 | 188 | 8.34e-14 | 70.9 |
| Msa1107100 | AT1G79900.1 | 28.931 | 159 | 105 | 4 | 44 | 200 | 139 | 291 | 9.75e-14 | 70.5 |
| Msa1107100 | AT5G26200.1 | 25.000 | 268 | 171 | 8 | 55 | 297 | 79 | 341 | 1.02e-13 | 70.9 |
| Msa1107100 | AT3G54110.1 | 24.231 | 260 | 177 | 6 | 38 | 290 | 48 | 294 | 1.09e-13 | 70.5 |
| Msa1107100 | AT4G03115.1 | 21.757 | 239 | 175 | 3 | 54 | 292 | 82 | 308 | 1.36e-13 | 70.5 |
| Msa1107100 | AT4G03115.3 | 21.757 | 239 | 175 | 3 | 54 | 292 | 114 | 340 | 1.79e-13 | 70.5 |
| Msa1107100 | AT5G58970.1 | 24.280 | 243 | 167 | 5 | 55 | 292 | 67 | 297 | 1.89e-13 | 70.1 |
| Msa1107100 | AT3G48850.1 | 27.174 | 184 | 122 | 4 | 114 | 293 | 72 | 247 | 2.03e-13 | 70.5 |
| Msa1107100 | AT5G15640.2 | 24.125 | 257 | 167 | 8 | 55 | 292 | 64 | 311 | 5.36e-13 | 68.6 |
| Msa1107100 | AT5G15640.1 | 24.125 | 257 | 167 | 8 | 55 | 292 | 71 | 318 | 5.89e-13 | 68.6 |
| Msa1107100 | AT1G72820.1 | 26.316 | 285 | 167 | 10 | 44 | 292 | 60 | 337 | 7.81e-13 | 68.6 |
| Msa1107100 | AT1G72820.2 | 26.316 | 285 | 167 | 10 | 44 | 292 | 60 | 337 | 7.81e-13 | 68.6 |
| Msa1107100 | AT2G33820.1 | 24.468 | 188 | 134 | 4 | 110 | 290 | 15 | 201 | 1.18e-12 | 67.8 |
| Msa1107100 | AT2G33820.4 | 24.731 | 186 | 132 | 4 | 112 | 290 | 17 | 201 | 1.34e-12 | 67.0 |
| Msa1107100 | AT2G35800.1 | 23.843 | 281 | 190 | 7 | 26 | 298 | 546 | 810 | 2.17e-12 | 67.8 |
| Msa1107100 | AT2G46320.4 | 27.149 | 221 | 130 | 7 | 58 | 259 | 14 | 222 | 3.41e-12 | 65.1 |
| Msa1107100 | AT5G14040.1 | 27.749 | 191 | 122 | 5 | 110 | 296 | 83 | 261 | 8.92e-12 | 65.5 |
| Msa1107100 | AT5G09470.1 | 23.711 | 291 | 193 | 7 | 16 | 297 | 66 | 336 | 1.95e-11 | 64.3 |
| Msa1107100 | AT2G22500.1 | 23.828 | 256 | 170 | 8 | 54 | 297 | 70 | 312 | 2.19e-11 | 63.9 |
| Msa1107100 | AT4G24570.1 | 22.800 | 250 | 171 | 5 | 55 | 296 | 78 | 313 | 5.37e-11 | 62.8 |
| Msa1107100 | AT2G33820.3 | 23.469 | 196 | 134 | 5 | 110 | 290 | 15 | 209 | 5.93e-11 | 62.8 |
Find 90 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCTTGTGGAAGTCTTTC+GGG | 0.161989 | 7_3:-48467061 | Msa1107100:CDS |
| TCAGCTATTGCATTCTGTTC+TGG | 0.166048 | 7_3:-48467812 | Msa1107100:intron |
| AAGAAGGATTTAGAGCATTT+TGG | 0.183919 | 7_3:-48468012 | Msa1107100:CDS |
| TACACAATGAACCTAAAATT+TGG | 0.191193 | 7_3:-48466036 | Msa1107100:three_prime_UTR |
| TAGAAATTGACTGCAGAATA+AGG | 0.230373 | 7_3:+48467956 | None:intergenic |
| TCTTGCTTGTGGAAGTCTTT+CGG | 0.252979 | 7_3:-48467062 | Msa1107100:CDS |
| TGCAGAGATGAAGGATTCTT+TGG | 0.285844 | 7_3:-48467430 | Msa1107100:CDS |
| CAGCTATTGCATTCTGTTCT+GGG | 0.287641 | 7_3:-48467811 | Msa1107100:CDS |
| GTGGTGTTGGATTTCATATT+TGG | 0.296891 | 7_3:-48466168 | Msa1107100:three_prime_UTR |
| ACCAGTTTGTTCGGGACATT+TGG | 0.344345 | 7_3:-48466397 | Msa1107100:CDS |
| GTCTATAATACCAGTTTGTT+CGG | 0.345720 | 7_3:-48466406 | Msa1107100:CDS |
| GGACACTGCTTTGATCTATA+TGG | 0.348763 | 7_3:-48465868 | Msa1107100:three_prime_UTR |
| CATCACTTTAGTTATATTCA+TGG | 0.350928 | 7_3:-48466202 | Msa1107100:three_prime_UTR |
| TTCATTGTGTATTTGGTCAT+TGG | 0.351786 | 7_3:+48466048 | None:intergenic |
| TTTGTCAGTGGTGGTTTGTC+AGG | 0.352435 | 7_3:-48467745 | Msa1107100:CDS |
| TGCCTCGACCTTATATCCTT+TGG | 0.354198 | 7_3:-48467713 | Msa1107100:CDS |
| CATTTCCGTTGGATCTTGTA+AGG | 0.368774 | 7_3:-48466468 | Msa1107100:CDS |
| TTTATTTGGTACAGGGTGTT+GGG | 0.368968 | 7_3:-48467288 | Msa1107100:intron |
| TACTAAATCCAAAGGATATA+AGG | 0.381755 | 7_3:+48467705 | None:intergenic |
| AGGCGAAGGATGCAGTTAGA+AGG | 0.394424 | 7_3:-48466448 | Msa1107100:CDS |
| CATTGAATAACTGATGTATC+TGG | 0.398629 | 7_3:-48466071 | Msa1107100:three_prime_UTR |
| CTTTATTTGGTACAGGGTGT+TGG | 0.407611 | 7_3:-48467289 | Msa1107100:intron |
| GAGTACTACAAGGTTGTTCC+CGG | 0.411443 | 7_3:-48466322 | Msa1107100:CDS |
| TCGGGCATTGTATCAGCAAC+AGG | 0.423302 | 7_3:-48467043 | Msa1107100:intron |
| GGTCACATATTTCGTAATGA+AGG | 0.441576 | 7_3:-48466376 | Msa1107100:CDS |
| ACCACAATTTGCAGAGATGA+AGG | 0.444778 | 7_3:-48467439 | Msa1107100:CDS |
| TCTATAATACCAGTTTGTTC+GGG | 0.449529 | 7_3:-48466405 | Msa1107100:CDS |
| AATAATCAACAATCACAGAT+TGG | 0.462372 | 7_3:-48470023 | Msa1107100:CDS |
| TACGTTGAGCCTCGTACAAA+AGG | 0.468834 | 7_3:+48468044 | None:intergenic |
| ACCAAATGTCCCGAACAAAC+TGG | 0.472639 | 7_3:+48466396 | None:intergenic |
| TTTGGAATGTACAAGGGACT+TGG | 0.480495 | 7_3:-48467412 | Msa1107100:CDS |
| ACCATAGCATTTGAATCATC+CGG | 0.481287 | 7_3:+48467088 | None:intergenic |
| CAACGTATTGTCAAAGAAGA+AGG | 0.485056 | 7_3:-48468028 | Msa1107100:CDS |
| GTCACATATTTCGTAATGAA+GGG | 0.495694 | 7_3:-48466375 | Msa1107100:CDS |
| GACTTTGATAGCTGGAAAGA+AGG | 0.498891 | 7_3:+48466260 | None:intergenic |
| TGCAAATTGTGGTAAAAGCA+TGG | 0.499020 | 7_3:+48467449 | None:intergenic |
| GTGATGGGTATCATATATGA+TGG | 0.501751 | 7_3:+48466219 | None:intergenic |
| ATTGAGATGTTGATGTATTG+AGG | 0.506478 | 7_3:-48465834 | Msa1107100:three_prime_UTR |
| AGCTATTGCATTCTGTTCTG+GGG | 0.509006 | 7_3:-48467810 | Msa1107100:CDS |
| CATGAATATAACTAAAGTGA+TGG | 0.509293 | 7_3:+48466203 | None:intergenic |
| TTGACCGTGTATACACCATT+CGG | 0.513480 | 7_3:-48466128 | Msa1107100:three_prime_UTR |
| ACTTTAGTTATATTCATGGT+AGG | 0.515106 | 7_3:-48466198 | Msa1107100:three_prime_UTR |
| GGGATACGAGGTTTGTATAG+AGG | 0.518603 | 7_3:-48466355 | Msa1107100:CDS |
| AGAAATTGACTGCAGAATAA+GGG | 0.520568 | 7_3:+48467957 | None:intergenic |
| AGGATTCTTTGGAATGTACA+AGG | 0.526697 | 7_3:-48467419 | Msa1107100:CDS |
| CTGCTAACGACTTTGATAGC+TGG | 0.529004 | 7_3:+48466252 | None:intergenic |
| AGAATGGGAACGGTGGTTGA+AGG | 0.534250 | 7_3:-48470062 | Msa1107100:CDS |
| CGTTGGATCTTGTAAGGCGA+AGG | 0.534564 | 7_3:-48466462 | Msa1107100:CDS |
| TACAAGGTTGTTCCCGGTGT+CGG | 0.535152 | 7_3:-48466316 | Msa1107100:CDS |
| TGCTTATAATAGTGACCGAA+TGG | 0.535218 | 7_3:+48466113 | None:intergenic |
| GGCGAAGGATGCAGTTAGAA+GGG | 0.535534 | 7_3:-48466447 | Msa1107100:CDS |
| AAGAACACGACTTGCAGCAC+AGG | 0.536771 | 7_3:-48467683 | Msa1107100:intron |
| GCCGGATGATTCAAATGCTA+TGG | 0.537566 | 7_3:-48467089 | Msa1107100:CDS |
| GGGACTTGGTGCAACGTTGT+TGG | 0.541280 | 7_3:-48467398 | Msa1107100:intron |
| GCTATTGCATTCTGTTCTGG+GGG | 0.550297 | 7_3:-48467809 | Msa1107100:CDS |
| GGGAACAACCTTGTAGTACT+CGG | 0.552648 | 7_3:+48466324 | None:intergenic |
| TGCTTATAATAGTGACTAGA+GGG | 0.553201 | 7_3:-48466007 | Msa1107100:three_prime_UTR |
| GTCTTTGTGCACTTTGTCAG+TGG | 0.559959 | 7_3:-48467757 | Msa1107100:CDS |
| AATTGAGCTGTTGGTGAGGT+GGG | 0.560907 | 7_3:-48465809 | Msa1107100:three_prime_UTR |
| TTGAGCCTCGTACAAAAGGC+TGG | 0.566834 | 7_3:+48468048 | None:intergenic |
| GCAAATTGTGGTAAAAGCAT+GGG | 0.570098 | 7_3:+48467450 | None:intergenic |
| TTTGTGCACTTTGTCAGTGG+TGG | 0.571387 | 7_3:-48467754 | Msa1107100:CDS |
| TCCTTCATCTCTGCAAATTG+TGG | 0.571747 | 7_3:+48467438 | None:intergenic |
| AGAACGCAAGCTCTCGTAAG+CGG | 0.572360 | 7_3:+48467243 | None:intergenic |
| GTGCTTATAATAGTGACTAG+AGG | 0.572779 | 7_3:-48466008 | Msa1107100:three_prime_UTR |
| GAGAAATGTCATATACTACA+AGG | 0.573100 | 7_3:-48467479 | Msa1107100:CDS |
| ACTCGCAGCAACATTTCCGT+TGG | 0.576265 | 7_3:-48466479 | Msa1107100:intron |
| CGTGTTCTTACTAAATCCAA+AGG | 0.576341 | 7_3:+48467697 | None:intergenic |
| ATGAATATAACTAAAGTGAT+GGG | 0.580707 | 7_3:+48466204 | None:intergenic |
| TAATAGTGACTAGAGGGTGT+AGG | 0.586661 | 7_3:-48466001 | Msa1107100:three_prime_UTR |
| ATGCAGTTAGAAGGGGTTGG+TGG | 0.587387 | 7_3:-48466439 | Msa1107100:CDS |
| ACTTTGATAGCTGGAAAGAA+GGG | 0.587563 | 7_3:+48466261 | None:intergenic |
| ATTGAGGAAAATTGAGCTGT+TGG | 0.588523 | 7_3:-48465818 | Msa1107100:three_prime_UTR |
| ATCCAAAGGATATAAGGTCG+AGG | 0.591755 | 7_3:+48467711 | None:intergenic |
| GGAACAACCTTGTAGTACTC+GGG | 0.601730 | 7_3:+48466325 | None:intergenic |
| TCTTGCTCAGTGTTGCAACA+TGG | 0.609868 | 7_3:+48468071 | None:intergenic |
| AAATTGAGCTGTTGGTGAGG+TGG | 0.611221 | 7_3:-48465810 | Msa1107100:three_prime_UTR |
| GAGAAACTTAAAGCTATGCA+AGG | 0.615073 | 7_3:+48467265 | None:intergenic |
| GCGGTGTGTGAGAATGGGAA+CGG | 0.634844 | 7_3:-48470072 | None:intergenic |
| CTTCGCCTTACAAGATCCAA+CGG | 0.643747 | 7_3:+48466463 | None:intergenic |
| AGGATGCAGTTAGAAGGGGT+TGG | 0.644529 | 7_3:-48466442 | Msa1107100:CDS |
| GCTATGGTCAGTCTTGCTTG+TGG | 0.645026 | 7_3:-48467073 | Msa1107100:CDS |
| GATTTCATATTTGGTAGCCA+CGG | 0.647033 | 7_3:-48466159 | Msa1107100:three_prime_UTR |
| TTTCGTAATGAAGGGATACG+AGG | 0.650259 | 7_3:-48466367 | Msa1107100:CDS |
| GGATTCTTTGGAATGTACAA+GGG | 0.652394 | 7_3:-48467418 | Msa1107100:CDS |
| GGAAAATTGAGCTGTTGGTG+AGG | 0.653812 | 7_3:-48465813 | Msa1107100:three_prime_UTR |
| GCGAAGGATGCAGTTAGAAG+GGG | 0.654784 | 7_3:-48466446 | Msa1107100:CDS |
| AGAAATGTCATATACTACAA+GGG | 0.672751 | 7_3:-48467478 | Msa1107100:CDS |
| GTGTGTGAGAATGGGAACGG+TGG | 0.688037 | 7_3:-48470069 | None:intergenic |
| GTGACCGAATGGTGTATACA+CGG | 0.712008 | 7_3:+48466124 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCAATTTATTTCATTTTTT+TGG | + | chr7_3:48466337-48466356 | None:intergenic | 10.0% |
| !! | TTTATTGTTTGATATTTATA+TGG | - | chr7_3:48467266-48467285 | Msa1107100:CDS | 10.0% |
| !! | TTATTGTTTGATATTTATAT+GGG | - | chr7_3:48467267-48467286 | Msa1107100:CDS | 10.0% |
| !!! | TACATTTTAGTATTATAAAA+TGG | + | chr7_3:48467621-48467640 | None:intergenic | 10.0% |
| !! | TATTTATCTGAATAATTTAT+GGG | - | chr7_3:48467733-48467752 | Msa1107100:CDS | 10.0% |
| !! | AATTACAAGAAAAGAATAAA+AGG | + | chr7_3:48465966-48465985 | None:intergenic | 15.0% |
| !!! | TGAATTTGATAACAAATTTT+AGG | - | chr7_3:48466458-48466477 | Msa1107100:CDS | 15.0% |
| !!! | TTTAAGTGATGTTTAATTTT+AGG | - | chr7_3:48466668-48466687 | Msa1107100:intron | 15.0% |
| !!! | TGATTTTATCATATTATTAG+CGG | + | chr7_3:48466866-48466885 | None:intergenic | 15.0% |
| !! | AAAATTCCATTTCTATATTA+TGG | - | chr7_3:48467189-48467208 | Msa1107100:intron | 15.0% |
| !! | GTATTTATCTGAATAATTTA+TGG | - | chr7_3:48467732-48467751 | Msa1107100:CDS | 15.0% |
| !! | ATATTACTACATACTTTATT+TGG | - | chr7_3:48468566-48468585 | Msa1107100:intron | 15.0% |
| !!! | TATGGTTTTGTAAATAATTA+CGG | - | chr7_3:48468734-48468753 | Msa1107100:intron | 15.0% |
| !!! | TCTATTTTATTTTTTGATTC+AGG | - | chr7_3:48468757-48468776 | Msa1107100:intron | 15.0% |
| !!! | TTTTTTTTTCTTTTCTCAAT+TGG | - | chr7_3:48469979-48469998 | Msa1107100:intron | 15.0% |
| !! | ATTAAATGTAATGACATATG+CGG | + | chr7_3:48466050-48466069 | None:intergenic | 20.0% |
| !!! | ATAACAAATTTTAGGTTGAA+AGG | - | chr7_3:48466466-48466485 | Msa1107100:CDS | 20.0% |
| !! | TATATTGTTTACTGCATATT+TGG | + | chr7_3:48467059-48467078 | None:intergenic | 20.0% |
| !! | AATATGCAGTAAACAATATA+AGG | - | chr7_3:48467059-48467078 | Msa1107100:CDS | 20.0% |
| !! | GAATAACCATAATATAGAAA+TGG | + | chr7_3:48467198-48467217 | None:intergenic | 20.0% |
| !!! | TCTATTTGATTTCAATCAAT+AGG | - | chr7_3:48467329-48467348 | Msa1107100:intron | 20.0% |
| !! | ATACTAAAATGTAATGTAAC+TGG | - | chr7_3:48467628-48467647 | Msa1107100:intron | 20.0% |
| !! | TACTAAAATGTAATGTAACT+GGG | - | chr7_3:48467629-48467648 | Msa1107100:intron | 20.0% |
| !! | AAAATTCAACAAACAAAAAG+TGG | + | chr7_3:48468217-48468236 | None:intergenic | 20.0% |
| !! | ATGAATATAACTAAAGTGAT+GGG | + | chr7_3:48469667-48469686 | None:intergenic | 20.0% |
| ! | AATAATCAACAATCACAGAT+TGG | - | chr7_3:48465845-48465864 | Msa1107100:three_prime_UTR | 25.0% |
| ! | TTAAATGTAATGACATATGC+GGG | + | chr7_3:48466049-48466068 | None:intergenic | 25.0% |
| ! | GTAAGTACAATTTAGTTAGA+TGG | - | chr7_3:48466213-48466232 | Msa1107100:three_prime_UTR | 25.0% |
| ! | CTAAATACACACTAAAATAC+AGG | + | chr7_3:48466365-48466384 | None:intergenic | 25.0% |
| !!! | GTGTATTTAGTTTTATTGTG+AGG | - | chr7_3:48466375-48466394 | Msa1107100:CDS | 25.0% |
| !!! | AAATTTTAGGTTGAAAGGTT+AGG | - | chr7_3:48466471-48466490 | Msa1107100:CDS | 25.0% |
| !!! | CAGTTTTGAAATATCATGTT+TGG | - | chr7_3:48466728-48466747 | Msa1107100:intron | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | - | chr7_3:48466891-48466910 | Msa1107100:intron | 25.0% |
| !! | TAAGTGATGTTCAATTTTGA+AGG | - | chr7_3:48466993-48467012 | Msa1107100:intron | 25.0% |
| ! | ATATTTGGATTCAACCTATT+TGG | + | chr7_3:48467044-48467063 | None:intergenic | 25.0% |
| ! | GTAAACAATATAAGGATAAG+AGG | - | chr7_3:48467067-48467086 | Msa1107100:CDS | 25.0% |
| !! | ATTAGTTCTTACTTCTTAAG+AGG | - | chr7_3:48467093-48467112 | Msa1107100:intron | 25.0% |
| ! | TAAGTTCAATGATTCACAAT+AGG | - | chr7_3:48467118-48467137 | Msa1107100:intron | 25.0% |
| ! | CTATATTATGGTTATTCTGA+AGG | - | chr7_3:48467201-48467220 | Msa1107100:intron | 25.0% |
| ! | TTGGAAAATACATGATTTAG+TGG | - | chr7_3:48467304-48467323 | Msa1107100:intron | 25.0% |
| ! | TGGAAAATACATGATTTAGT+GGG | - | chr7_3:48467305-48467324 | Msa1107100:intron | 25.0% |
| !!! | ATCAATAGGAGAGTTTTTTA+TGG | - | chr7_3:48467343-48467362 | Msa1107100:intron | 25.0% |
| ! | ATGAGATAGATTCAAACTTA+AGG | + | chr7_3:48468018-48468037 | None:intergenic | 25.0% |
| ! | TACTAAATCCAAAGGATATA+AGG | + | chr7_3:48468166-48468185 | None:intergenic | 25.0% |
| ! | CATTGAATAAAGTAATGTCT+TGG | - | chr7_3:48468267-48468286 | Msa1107100:intron | 25.0% |
| ! | AGAAATGTCATATACTACAA+GGG | - | chr7_3:48468390-48468409 | Msa1107100:intron | 25.0% |
| ! | CAAAATAAAGAAGCAATAAG+AGG | + | chr7_3:48468523-48468542 | None:intergenic | 25.0% |
| !! | TACATACTTTATTTGGTACA+GGG | - | chr7_3:48468573-48468592 | Msa1107100:intron | 25.0% |
| !!! | TTTTATTTTTTGATTCAGGC+CGG | - | chr7_3:48468761-48468780 | Msa1107100:intron | 25.0% |
| ! | TTGTAAAAATTGCTTGTGAT+TGG | - | chr7_3:48469171-48469190 | Msa1107100:intron | 25.0% |
| ! | CATGAATATAACTAAAGTGA+TGG | + | chr7_3:48469668-48469687 | None:intergenic | 25.0% |
| ! | CATCACTTTAGTTATATTCA+TGG | - | chr7_3:48469666-48469685 | Msa1107100:intron | 25.0% |
| ! | ACTTTAGTTATATTCATGGT+AGG | - | chr7_3:48469670-48469689 | Msa1107100:intron | 25.0% |
| !!! | TTTTAGGTTCATTGTGTATT+TGG | + | chr7_3:48469830-48469849 | None:intergenic | 25.0% |
| ! | TACACAATGAACCTAAAATT+TGG | - | chr7_3:48469832-48469851 | Msa1107100:intron | 25.0% |
| !! | AAGCACAAAAACCAAATTTT+AGG | + | chr7_3:48469846-48469865 | None:intergenic | 25.0% |
| AAAGGAAACCTGAAAAAGAA+TGG | + | chr7_3:48465948-48465967 | None:intergenic | 30.0% | |
| TTGTAATTTATGAAGCTCTG+TGG | - | chr7_3:48465978-48465997 | Msa1107100:three_prime_UTR | 30.0% | |
| GTACAATTTAGTTAGATGGA+AGG | - | chr7_3:48466217-48466236 | Msa1107100:three_prime_UTR | 30.0% | |
| CTTAAGTTTAAGTGTGTGAT+TGG | - | chr7_3:48466294-48466313 | Msa1107100:CDS | 30.0% | |
| !!! | TTTTTTGGTCAAATAGCTAC+TGG | + | chr7_3:48466322-48466341 | None:intergenic | 30.0% |
| !!! | CGGTTTTGAAATATCATGTT+TGG | - | chr7_3:48466518-48466537 | Msa1107100:intron | 30.0% |
| !!! | CGGTTTTGAAATATCATGTT+TGG | - | chr7_3:48466518-48466537 | Msa1107100:intron | 30.0% |
| GGTTGAAAAGTTATGTTTGA+AGG | - | chr7_3:48466689-48466708 | Msa1107100:intron | 30.0% | |
| ! | GCTTTAAGTGTTATGTTTGA+AGG | - | chr7_3:48466771-48466790 | Msa1107100:intron | 30.0% |
| TTATCATATTATTAGCGGTG+TGG | + | chr7_3:48466861-48466880 | None:intergenic | 30.0% | |
| ! | CTACTCTAGAAAAACCAAAT+AGG | - | chr7_3:48467027-48467046 | Msa1107100:intron | 30.0% |
| TAGGAATGTAATTTATCAGC+CGG | - | chr7_3:48467137-48467156 | Msa1107100:intron | 30.0% | |
| ATGGGTCTCACTAAATTTAT+TGG | - | chr7_3:48467285-48467304 | Msa1107100:intron | 30.0% | |
| !!! | ATAGGAGAGTTTTTTATGGA+AGG | - | chr7_3:48467347-48467366 | Msa1107100:intron | 30.0% |
| AACCAAGCTACAGAAATAAT+AGG | + | chr7_3:48467511-48467530 | None:intergenic | 30.0% | |
| AAATTGAAGAGATTGTCTGT+TGG | - | chr7_3:48467542-48467561 | Msa1107100:intron | 30.0% | |
| TATCCACATTAAAACCTTGT+TGG | - | chr7_3:48467686-48467705 | Msa1107100:CDS | 30.0% | |
| !! | AAGAAGGATTTAGAGCATTT+TGG | - | chr7_3:48467856-48467875 | Msa1107100:intron | 30.0% |
| AGAAATTGACTGCAGAATAA+GGG | + | chr7_3:48467914-48467933 | None:intergenic | 30.0% | |
| TAGAAATTGACTGCAGAATA+AGG | + | chr7_3:48467915-48467934 | None:intergenic | 30.0% | |
| TTATTCAATGCATGCCATTA+GGG | + | chr7_3:48468257-48468276 | None:intergenic | 30.0% | |
| TTTATTCAATGCATGCCATT+AGG | + | chr7_3:48468258-48468277 | None:intergenic | 30.0% | |
| !!! | GTTGCTACTTTTTTGATAAG+TGG | + | chr7_3:48468307-48468326 | None:intergenic | 30.0% |
| TATATGACATTTCTCTGCAT+TGG | + | chr7_3:48468384-48468403 | None:intergenic | 30.0% | |
| GAGAAATGTCATATACTACA+AGG | - | chr7_3:48468389-48468408 | Msa1107100:intron | 30.0% | |
| TATCAGTTGTAAGATAAAGC+AGG | + | chr7_3:48468549-48468568 | None:intergenic | 30.0% | |
| ! | CTACATACTTTATTTGGTAC+AGG | - | chr7_3:48468572-48468591 | Msa1107100:intron | 30.0% |
| ATGTGTGGTTATTAAATCCT+TGG | - | chr7_3:48469006-48469025 | Msa1107100:intron | 30.0% | |
| TGTGTGGTTATTAAATCCTT+GGG | - | chr7_3:48469007-48469026 | Msa1107100:intron | 30.0% | |
| !!! | TGAATTCATCTTTTTTCCCA+AGG | + | chr7_3:48469026-48469045 | None:intergenic | 30.0% |
| CACAAACAAAAACAACTAGT+TGG | - | chr7_3:48469113-48469132 | Msa1107100:intron | 30.0% | |
| !!! | TGCGATTCAATAGTTTTGTT+TGG | - | chr7_3:48469144-48469163 | Msa1107100:intron | 30.0% |
| GTGATTGGTATAAACAGATT+TGG | - | chr7_3:48469186-48469205 | Msa1107100:intron | 30.0% | |
| ACATGATGTGTTTCAAACAA+GGG | + | chr7_3:48469294-48469313 | None:intergenic | 30.0% | |
| AACATGATGTGTTTCAAACA+AGG | + | chr7_3:48469295-48469314 | None:intergenic | 30.0% | |
| ! | GTCTATAATACCAGTTTGTT+CGG | - | chr7_3:48469462-48469481 | Msa1107100:intron | 30.0% |
| ! | TCTATAATACCAGTTTGTTC+GGG | - | chr7_3:48469463-48469482 | Msa1107100:intron | 30.0% |
| GTCACATATTTCGTAATGAA+GGG | - | chr7_3:48469493-48469512 | Msa1107100:intron | 30.0% | |
| ! | ATTCATGGTAGGAAATTTTG+TGG | - | chr7_3:48469681-48469700 | Msa1107100:intron | 30.0% |
| CATTGAATAACTGATGTATC+TGG | - | chr7_3:48469797-48469816 | Msa1107100:intron | 30.0% | |
| TTCATTGTGTATTTGGTCAT+TGG | + | chr7_3:48469823-48469842 | None:intergenic | 30.0% | |
| TGCTTATAATAGTGACTAGA+GGG | - | chr7_3:48469861-48469880 | Msa1107100:intron | 30.0% | |
| ATTGAGATGTTGATGTATTG+AGG | - | chr7_3:48470034-48470053 | Msa1107100:CDS | 30.0% | |
| ! | TAGACTCACCATTCTTTTTC+AGG | - | chr7_3:48465937-48465956 | Msa1107100:three_prime_UTR | 35.0% |
| !! | TGGAAGGACATTTGATTTGT+TGG | - | chr7_3:48466233-48466252 | Msa1107100:three_prime_UTR | 35.0% |
| !! | GGAAGGACATTTGATTTGTT+GGG | - | chr7_3:48466234-48466253 | Msa1107100:three_prime_UTR | 35.0% |
| !! | GAAGGACATTTGATTTGTTG+GGG | - | chr7_3:48466235-48466254 | Msa1107100:three_prime_UTR | 35.0% |
| CACACTTAAACTTAAGTGTC+CGG | + | chr7_3:48466290-48466309 | None:intergenic | 35.0% | |
| TGTCGAAAAGTTGTGTTTGA+AGG | - | chr7_3:48466582-48466601 | Msa1107100:intron | 35.0% | |
| AAGGTAGAAGCTCTGTATTT+CGG | - | chr7_3:48466601-48466620 | Msa1107100:intron | 35.0% | |
| CCTCATAGTCTCTAAACATA+CGG | + | chr7_3:48466805-48466824 | None:intergenic | 35.0% | |
| CTCCTAGTCTAGTAATAACA+GGG | + | chr7_3:48467452-48467471 | None:intergenic | 35.0% | |
| TCTCCTAGTCTAGTAATAAC+AGG | + | chr7_3:48467453-48467472 | None:intergenic | 35.0% | |
| GTTATTACTAGACTAGGAGA+CGG | - | chr7_3:48467453-48467472 | Msa1107100:CDS | 35.0% | |
| TTATTACTAGACTAGGAGAC+GGG | - | chr7_3:48467454-48467473 | Msa1107100:CDS | 35.0% | |
| !! | AGCCTATTATTTCTGTAGCT+TGG | - | chr7_3:48467506-48467525 | Msa1107100:intron | 35.0% |
| ! | ATGTAACTGGGTTGTTTCAT+TGG | - | chr7_3:48467641-48467660 | Msa1107100:intron | 35.0% |
| ! | TGTAACTGGGTTGTTTCATT+GGG | - | chr7_3:48467642-48467661 | Msa1107100:intron | 35.0% |
| !! | GTACCAACAAGGTTTTAATG+TGG | + | chr7_3:48467692-48467711 | None:intergenic | 35.0% |
| ACTGTTGTAGTTCATTCAAC+TGG | - | chr7_3:48467710-48467729 | Msa1107100:CDS | 35.0% | |
| !! | CAAGGTATGCATTTTGATGT+CGG | - | chr7_3:48467774-48467793 | Msa1107100:CDS | 35.0% |
| CAACGTATTGTCAAAGAAGA+AGG | - | chr7_3:48467840-48467859 | Msa1107100:intron | 35.0% | |
| !! | GGATTTAGAGCATTTTGGAA+AGG | - | chr7_3:48467861-48467880 | Msa1107100:intron | 35.0% |
| CGTGTTCTTACTAAATCCAA+AGG | + | chr7_3:48468174-48468193 | None:intergenic | 35.0% | |
| CACTATATTTAAGCCCCTAA+TGG | - | chr7_3:48468240-48468259 | Msa1107100:intron | 35.0% | |
| TATTCAATGCATGCCATTAG+GGG | + | chr7_3:48468256-48468275 | None:intergenic | 35.0% | |
| ! | GCAAATTGTGGTAAAAGCAT+GGG | + | chr7_3:48468421-48468440 | None:intergenic | 35.0% |
| TGCAAATTGTGGTAAAAGCA+TGG | + | chr7_3:48468422-48468441 | None:intergenic | 35.0% | |
| !! | AGGATTCTTTGGAATGTACA+AGG | - | chr7_3:48468449-48468468 | Msa1107100:intron | 35.0% |
| !! | GGATTCTTTGGAATGTACAA+GGG | - | chr7_3:48468450-48468469 | Msa1107100:intron | 35.0% |
| ! | TTTATTTGGTACAGGGTGTT+GGG | - | chr7_3:48468580-48468599 | Msa1107100:intron | 35.0% |
| GAGAAACTTAAAGCTATGCA+AGG | + | chr7_3:48468606-48468625 | None:intergenic | 35.0% | |
| !! | GTTCTTTTTGGAAGTCTCAA+AGG | - | chr7_3:48468643-48468662 | Msa1107100:intron | 35.0% |
| TATGTACTTGCACTGAATTG+AGG | - | chr7_3:48468672-48468691 | Msa1107100:intron | 35.0% | |
| ACCATAGCATTTGAATCATC+CGG | + | chr7_3:48468783-48468802 | None:intergenic | 35.0% | |
| !!! | TTGTTTTTGTTTGTGCGTTC+CGG | + | chr7_3:48469108-48469127 | None:intergenic | 35.0% |
| GGTCACATATTTCGTAATGA+AGG | - | chr7_3:48469492-48469511 | Msa1107100:intron | 35.0% | |
| ATAAAAACAATACCGACACC+GGG | + | chr7_3:48469567-48469586 | None:intergenic | 35.0% | |
| CATAAAAACAATACCGACAC+CGG | + | chr7_3:48469568-48469587 | None:intergenic | 35.0% | |
| ! | ACTTTGATAGCTGGAAAGAA+GGG | + | chr7_3:48469610-48469629 | None:intergenic | 35.0% |
| !! | GTGATGGGTATCATATATGA+TGG | + | chr7_3:48469652-48469671 | None:intergenic | 35.0% |
| ! | GTGGTGTTGGATTTCATATT+TGG | - | chr7_3:48469700-48469719 | Msa1107100:intron | 35.0% |
| ! | GATTTCATATTTGGTAGCCA+CGG | - | chr7_3:48469709-48469728 | Msa1107100:intron | 35.0% |
| TGCTTATAATAGTGACCGAA+TGG | + | chr7_3:48469758-48469777 | None:intergenic | 35.0% | |
| GTGCTTATAATAGTGACTAG+AGG | - | chr7_3:48469860-48469879 | Msa1107100:intron | 35.0% | |
| ATTGAGGAAAATTGAGCTGT+TGG | - | chr7_3:48470050-48470069 | Msa1107100:CDS | 35.0% | |
| !! | ACTGTTTCTCAGCTTTTAGC+TGG | - | chr7_3:48465869-48465888 | Msa1107100:three_prime_UTR | 40.0% |
| AGAATGGTGAGTCTAGAAAG+AGG | + | chr7_3:48465932-48465951 | None:intergenic | 40.0% | |
| ! | AGTTTTACCAGTGTCGTGTT+CGG | - | chr7_3:48466088-48466107 | Msa1107100:three_prime_UTR | 40.0% |
| GGTTGAAAGGTTAGGTTTGA+TGG | - | chr7_3:48466479-48466498 | Msa1107100:intron | 40.0% | |
| ATGGCAGAAGCTCTGTATTT+CGG | - | chr7_3:48466498-48466517 | Msa1107100:intron | 40.0% | |
| CCGTATGTTTAGAGACTATG+AGG | - | chr7_3:48466802-48466821 | Msa1107100:intron | 40.0% | |
| TGTTTAGAGACTATGAGGCA+TGG | - | chr7_3:48466807-48466826 | Msa1107100:intron | 40.0% | |
| AGTCTAGTAATAACAGGGCT+TGG | + | chr7_3:48467447-48467466 | None:intergenic | 40.0% | |
| AGCCCTGTTATTACTAGACT+AGG | - | chr7_3:48467447-48467466 | Msa1107100:CDS | 40.0% | |
| TATTACTAGACTAGGAGACG+GGG | - | chr7_3:48467455-48467474 | Msa1107100:CDS | 40.0% | |
| GAACTACAACAGTACCAACA+AGG | + | chr7_3:48467703-48467722 | None:intergenic | 40.0% | |
| TTATGGGCCTTAACTTTACC+AGG | - | chr7_3:48467749-48467768 | Msa1107100:CDS | 40.0% | |
| TCTGTGTGTAGCTCAGAATT+TGG | - | chr7_3:48467982-48468001 | Msa1107100:CDS | 40.0% | |
| TCAGCTATTGCATTCTGTTC+TGG | - | chr7_3:48468056-48468075 | Msa1107100:CDS | 40.0% | |
| CAGCTATTGCATTCTGTTCT+GGG | - | chr7_3:48468057-48468076 | Msa1107100:CDS | 40.0% | |
| AGCTATTGCATTCTGTTCTG+GGG | - | chr7_3:48468058-48468077 | Msa1107100:CDS | 40.0% | |
| ATCCAAAGGATATAAGGTCG+AGG | + | chr7_3:48468160-48468179 | None:intergenic | 40.0% | |
| AGCATAACAGTCTCAACTCT+CGG | + | chr7_3:48468355-48468374 | None:intergenic | 40.0% | |
| ACCACAATTTGCAGAGATGA+AGG | - | chr7_3:48468429-48468448 | Msa1107100:intron | 40.0% | |
| TCCTTCATCTCTGCAAATTG+TGG | + | chr7_3:48468433-48468452 | None:intergenic | 40.0% | |
| TGCAGAGATGAAGGATTCTT+TGG | - | chr7_3:48468438-48468457 | Msa1107100:intron | 40.0% | |
| ! | TTTGGAATGTACAAGGGACT+TGG | - | chr7_3:48468456-48468475 | Msa1107100:intron | 40.0% |
| ! | CTTTATTTGGTACAGGGTGT+TGG | - | chr7_3:48468579-48468598 | Msa1107100:intron | 40.0% |
| TTCCTCTTGCTTCGTACATA+TGG | - | chr7_3:48468716-48468735 | Msa1107100:intron | 40.0% | |
| AACCATATGTACGAAGCAAG+AGG | + | chr7_3:48468721-48468740 | None:intergenic | 40.0% | |
| TCTTGCTTGTGGAAGTCTTT+CGG | - | chr7_3:48468806-48468825 | Msa1107100:intron | 40.0% | |
| TGTGCATCATGCAAGAAAGT+AGG | + | chr7_3:48468987-48469006 | None:intergenic | 40.0% | |
| GCTGTTATAAGTTGCATGCT+TGG | - | chr7_3:48469210-48469229 | Msa1107100:intron | 40.0% | |
| CATTTCCGTTGGATCTTGTA+AGG | - | chr7_3:48469400-48469419 | Msa1107100:intron | 40.0% | |
| TTTCGTAATGAAGGGATACG+AGG | - | chr7_3:48469501-48469520 | Msa1107100:intron | 40.0% | |
| ! | GACTTTGATAGCTGGAAAGA+AGG | + | chr7_3:48469611-48469630 | None:intergenic | 40.0% |
| ! | GGTAGGAAATTTTGTGGTGT+TGG | - | chr7_3:48469687-48469706 | Msa1107100:intron | 40.0% |
| TTGACCGTGTATACACCATT+CGG | - | chr7_3:48469740-48469759 | Msa1107100:intron | 40.0% | |
| ! | TAATAGTGACTAGAGGGTGT+AGG | - | chr7_3:48469867-48469886 | Msa1107100:intron | 40.0% |
| GGACACTGCTTTGATCTATA+TGG | - | chr7_3:48470000-48470019 | Msa1107100:CDS | 40.0% | |
| !! | GTTTCTCAGCTTTTAGCTGG+TGG | - | chr7_3:48465872-48465891 | Msa1107100:three_prime_UTR | 45.0% |
| !! | TCAGCTTTTAGCTGGTGGTT+TGG | - | chr7_3:48465877-48465896 | Msa1107100:three_prime_UTR | 45.0% |
| ACTACGAAGCAATGACACAC+AGG | + | chr7_3:48466117-48466136 | None:intergenic | 45.0% | |
| ACTTAAGTGTCCGGAGAAGT+GGG | + | chr7_3:48466281-48466300 | None:intergenic | 45.0% | |
| AACTTAAGTGTCCGGAGAAG+TGG | + | chr7_3:48466282-48466301 | None:intergenic | 45.0% | |
| TGTGAAACACAGACACTCCT+CGG | + | chr7_3:48466944-48466963 | None:intergenic | 45.0% | |
| CAACACATTAAACCAACCCG+TGG | + | chr7_3:48467169-48467188 | None:intergenic | 45.0% | |
| !! | GGGCTTGGTTAGTTTGAATG+AGG | + | chr7_3:48467432-48467451 | None:intergenic | 45.0% |
| CCTTGCACCTGGTAAAGTTA+AGG | + | chr7_3:48467759-48467778 | None:intergenic | 45.0% | |
| CCTTAACTTTACCAGGTGCA+AGG | - | chr7_3:48467756-48467775 | Msa1107100:CDS | 45.0% | |
| CAAAATGCATACCTTGCACC+TGG | + | chr7_3:48467770-48467789 | None:intergenic | 45.0% | |
| TCTTGCTCAGTGTTGCAACA+TGG | + | chr7_3:48467800-48467819 | None:intergenic | 45.0% | |
| TACGTTGAGCCTCGTACAAA+AGG | + | chr7_3:48467827-48467846 | None:intergenic | 45.0% | |
| GCTATTGCATTCTGTTCTGG+GGG | - | chr7_3:48468059-48468078 | Msa1107100:CDS | 45.0% | |
| GGGGGAGAATCATAAAGCAA+AGG | - | chr7_3:48468077-48468096 | Msa1107100:CDS | 45.0% | |
| GTCTTTGTGCACTTTGTCAG+TGG | - | chr7_3:48468111-48468130 | Msa1107100:intron | 45.0% | |
| TTTGTGCACTTTGTCAGTGG+TGG | - | chr7_3:48468114-48468133 | Msa1107100:intron | 45.0% | |
| ! | TTTGTCAGTGGTGGTTTGTC+AGG | - | chr7_3:48468123-48468142 | Msa1107100:intron | 45.0% |
| TGCCTCGACCTTATATCCTT+TGG | - | chr7_3:48468155-48468174 | Msa1107100:intron | 45.0% | |
| ! | ACGAGAGCTTGCGTTCTTTT+TGG | - | chr7_3:48468631-48468650 | Msa1107100:intron | 45.0% |
| GCCGGATGATTCAAATGCTA+TGG | - | chr7_3:48468779-48468798 | Msa1107100:intron | 45.0% | |
| CTTGCTTGTGGAAGTCTTTC+GGG | - | chr7_3:48468807-48468826 | Msa1107100:intron | 45.0% | |
| GCATTGTATCAGCAACAGGT+GGG | - | chr7_3:48468829-48468848 | Msa1107100:intron | 45.0% | |
| GCTGTTAGAAGTTGCCTACT+TGG | - | chr7_3:48468935-48468954 | Msa1107100:intron | 45.0% | |
| GTTAGAAGTTGCCTACTTGG+TGG | - | chr7_3:48468938-48468957 | Msa1107100:intron | 45.0% | |
| TCTTGCATGATGCACATGTG+TGG | - | chr7_3:48468991-48469010 | Msa1107100:intron | 45.0% | |
| CTAGCTCCCAAGAAACAATC+AGG | - | chr7_3:48469066-48469085 | Msa1107100:intron | 45.0% | |
| ! | GGTCAGCCTGATTGTTTCTT+GGG | + | chr7_3:48469075-48469094 | None:intergenic | 45.0% |
| CTTCGCCTTACAAGATCCAA+CGG | + | chr7_3:48469408-48469427 | None:intergenic | 45.0% | |
| ! | ACCAGTTTGTTCGGGACATT+TGG | - | chr7_3:48469471-48469490 | Msa1107100:intron | 45.0% |
| ACCAAATGTCCCGAACAAAC+TGG | + | chr7_3:48469475-48469494 | None:intergenic | 45.0% | |
| GGGATACGAGGTTTGTATAG+AGG | - | chr7_3:48469513-48469532 | Msa1107100:intron | 45.0% | |
| ! | CATTTTGCCCGAGTACTACA+AGG | - | chr7_3:48469536-48469555 | Msa1107100:intron | 45.0% |
| GGAACAACCTTGTAGTACTC+GGG | + | chr7_3:48469546-48469565 | None:intergenic | 45.0% | |
| GGGAACAACCTTGTAGTACT+CGG | + | chr7_3:48469547-48469566 | None:intergenic | 45.0% | |
| GAGTACTACAAGGTTGTTCC+CGG | - | chr7_3:48469546-48469565 | Msa1107100:intron | 45.0% | |
| ! | CTGCTAACGACTTTGATAGC+TGG | + | chr7_3:48469619-48469638 | None:intergenic | 45.0% |
| GTGACCGAATGGTGTATACA+CGG | + | chr7_3:48469747-48469766 | None:intergenic | 45.0% | |
| GGAAAATTGAGCTGTTGGTG+AGG | - | chr7_3:48470055-48470074 | Msa1107100:CDS | 45.0% | |
| ! | AAATTGAGCTGTTGGTGAGG+TGG | - | chr7_3:48470058-48470077 | Msa1107100:CDS | 45.0% |
| !! | CTTTTAGCTGGTGGTTTGGC+TGG | - | chr7_3:48465881-48465900 | Msa1107100:three_prime_UTR | 50.0% |
| TCCGGAGAAGTGGGATATCA+CGG | + | chr7_3:48466272-48466291 | None:intergenic | 50.0% | |
| GAGACTATGAGGCATGGACA+CGG | - | chr7_3:48466813-48466832 | Msa1107100:intron | 50.0% | |
| ACACAGACACTCCTCGGATT+AGG | + | chr7_3:48466938-48466957 | None:intergenic | 50.0% | |
| !! | ACTAGGAGACGGGGTTTTGA+AGG | - | chr7_3:48467464-48467483 | Msa1107100:CDS | 50.0% |
| ! | CAAGACCAGCCTTTTGTACG+AGG | - | chr7_3:48467815-48467834 | Msa1107100:intron | 50.0% |
| TTGAGCCTCGTACAAAAGGC+TGG | + | chr7_3:48467823-48467842 | None:intergenic | 50.0% | |
| AAGAACACGACTTGCAGCAC+AGG | - | chr7_3:48468185-48468204 | Msa1107100:intron | 50.0% | |
| AGAACGCAAGCTCTCGTAAG+CGG | + | chr7_3:48468628-48468647 | None:intergenic | 50.0% | |
| GCTATGGTCAGTCTTGCTTG+TGG | - | chr7_3:48468795-48468814 | Msa1107100:intron | 50.0% | |
| ! | TCGGGCATTGTATCAGCAAC+AGG | - | chr7_3:48468825-48468844 | Msa1107100:intron | 50.0% |
| GGCATTGTATCAGCAACAGG+TGG | - | chr7_3:48468828-48468847 | Msa1107100:intron | 50.0% | |
| !! | AAGTTGCCTACTTGGTGGTG+TGG | - | chr7_3:48468943-48468962 | Msa1107100:intron | 50.0% |
| ! | GGGTCAGCCTGATTGTTTCT+TGG | + | chr7_3:48469076-48469095 | None:intergenic | 50.0% |
| AGGCTGACCCTGTGTTAATC+CGG | - | chr7_3:48469086-48469105 | Msa1107100:intron | 50.0% | |
| GTGCGTTCCGGATTAACACA+GGG | + | chr7_3:48469096-48469115 | None:intergenic | 50.0% | |
| TGTGCGTTCCGGATTAACAC+AGG | + | chr7_3:48469097-48469116 | None:intergenic | 50.0% | |
| ACTCGCAGCAACATTTCCGT+TGG | - | chr7_3:48469389-48469408 | Msa1107100:intron | 50.0% | |
| CGTTGGATCTTGTAAGGCGA+AGG | - | chr7_3:48469406-48469425 | Msa1107100:intron | 50.0% | |
| AGGCGAAGGATGCAGTTAGA+AGG | - | chr7_3:48469420-48469439 | Msa1107100:intron | 50.0% | |
| GGCGAAGGATGCAGTTAGAA+GGG | - | chr7_3:48469421-48469440 | Msa1107100:intron | 50.0% | |
| GCGAAGGATGCAGTTAGAAG+GGG | - | chr7_3:48469422-48469441 | Msa1107100:intron | 50.0% | |
| AGGATGCAGTTAGAAGGGGT+TGG | - | chr7_3:48469426-48469445 | Msa1107100:intron | 50.0% | |
| ATGCAGTTAGAAGGGGTTGG+TGG | - | chr7_3:48469429-48469448 | Msa1107100:intron | 50.0% | |
| TACAAGGTTGTTCCCGGTGT+CGG | - | chr7_3:48469552-48469571 | Msa1107100:intron | 50.0% | |
| CACGGTCAAAAATGTGTCCG+TGG | + | chr7_3:48469729-48469748 | None:intergenic | 50.0% | |
| !! | GGTGGTTTGGCTGGTGCTTT+TGG | - | chr7_3:48465890-48465909 | Msa1107100:three_prime_UTR | 55.0% |
| CCGGAGAAGTGGGATATCAC+GGG | + | chr7_3:48466271-48466290 | None:intergenic | 55.0% | |
| CCCGTGATATCCCACTTCTC+CGG | - | chr7_3:48466268-48466287 | Msa1107100:CDS | 55.0% | |
| ATGAGGCATGGACACGGACA+CGG | - | chr7_3:48466819-48466838 | Msa1107100:intron | 55.0% | |
| !! | TATGTGTCGGTGTCGTGTCG+CGG | - | chr7_3:48466904-48466923 | Msa1107100:intron | 55.0% |
| TTATCAGCCGGTGCTTGCCA+CGG | - | chr7_3:48467149-48467168 | Msa1107100:intron | 55.0% | |
| !!! | CGGGGTTTTGAAGGCAAGAG+TGG | - | chr7_3:48467473-48467492 | Msa1107100:CDS | 55.0% |
| !! | GGGACTTGGTGCAACGTTGT+TGG | - | chr7_3:48468470-48468489 | Msa1107100:intron | 55.0% |
| AACGCACCACACCACCAAGT+AGG | + | chr7_3:48468952-48468971 | None:intergenic | 55.0% | |
| CAGGACACCGAACACGACAC+TGG | + | chr7_3:48466098-48466117 | None:intergenic | 60.0% | |
| ACACGGACACGGACACGACA+CGG | - | chr7_3:48466830-48466849 | Msa1107100:intron | 60.0% | |
| !! | ATGTGTCGGTGTCGTGTCGC+GGG | - | chr7_3:48466905-48466924 | Msa1107100:intron | 60.0% |
| TATCAGCCGGTGCTTGCCAC+GGG | - | chr7_3:48467150-48467169 | Msa1107100:intron | 60.0% | |
| AACCAACCCGTGGCAAGCAC+CGG | + | chr7_3:48467159-48467178 | None:intergenic | 60.0% | |
| !! | TGTGTCGGTGTCGTGTCGCG+GGG | - | chr7_3:48466906-48466925 | Msa1107100:intron | 65.0% |
| !! | GTGTCGGTGTCGTGTCGCGG+GGG | - | chr7_3:48466907-48466926 | Msa1107100:intron | 70.0% |
| CGGGGGACACGCCTAATCCG+AGG | - | chr7_3:48466924-48466943 | Msa1107100:intron | 70.0% | |
| AGCCGGTGCTTGCCACGGGT+TGG | - | chr7_3:48467154-48467173 | Msa1107100:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 48465809 | 48470081 | 48465809 | ID=Msa1107100;Name=Msa1107100 |
| chr7_3 | mRNA | 48465809 | 48470081 | 48465809 | ID=Msa1107100-mRNA-1;Parent=Msa1107100;Name=Msa1107100-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.83|0.71|1|0.83|0.71|7|446|299 |
| chr7_3 | exon | 48465809 | 48466493 | 48465809 | ID=Msa1107100-mRNA-1:exon:9867;Parent=Msa1107100-mRNA-1 |
| chr7_3 | exon | 48467044 | 48467111 | 48467044 | ID=Msa1107100-mRNA-1:exon:9866;Parent=Msa1107100-mRNA-1 |
| chr7_3 | exon | 48467226 | 48467296 | 48467226 | ID=Msa1107100-mRNA-1:exon:9865;Parent=Msa1107100-mRNA-1 |
| chr7_3 | exon | 48467399 | 48467500 | 48467399 | ID=Msa1107100-mRNA-1:exon:9864;Parent=Msa1107100-mRNA-1 |
| chr7_3 | exon | 48467684 | 48467830 | 48467684 | ID=Msa1107100-mRNA-1:exon:9863;Parent=Msa1107100-mRNA-1 |
| chr7_3 | exon | 48467934 | 48468112 | 48467934 | ID=Msa1107100-mRNA-1:exon:9862;Parent=Msa1107100-mRNA-1 |
| chr7_3 | exon | 48469988 | 48470081 | 48469988 | ID=Msa1107100-mRNA-1:exon:9861;Parent=Msa1107100-mRNA-1 |
| chr7_3 | CDS | 48469988 | 48470081 | 48469988 | ID=Msa1107100-mRNA-1:cds;Parent=Msa1107100-mRNA-1 |
| chr7_3 | CDS | 48467934 | 48468112 | 48467934 | ID=Msa1107100-mRNA-1:cds;Parent=Msa1107100-mRNA-1 |
| chr7_3 | CDS | 48467684 | 48467830 | 48467684 | ID=Msa1107100-mRNA-1:cds;Parent=Msa1107100-mRNA-1 |
| chr7_3 | CDS | 48467399 | 48467500 | 48467399 | ID=Msa1107100-mRNA-1:cds;Parent=Msa1107100-mRNA-1 |
| chr7_3 | CDS | 48467226 | 48467296 | 48467226 | ID=Msa1107100-mRNA-1:cds;Parent=Msa1107100-mRNA-1 |
| chr7_3 | CDS | 48467044 | 48467111 | 48467044 | ID=Msa1107100-mRNA-1:cds;Parent=Msa1107100-mRNA-1 |
| chr7_3 | CDS | 48466255 | 48466493 | 48466255 | ID=Msa1107100-mRNA-1:cds;Parent=Msa1107100-mRNA-1 |
| chr7_3 | three_prime_UTR | 48465809 | 48466254 | 48465809 | ID=Msa1107100-mRNA-1:three_prime_utr;Parent=Msa1107100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
