Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101710 | G7I4K7 | 92.000 | 50 | 4 | 0 | 2 | 51 | 153 | 202 | 2.30e-22 | 97.4 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011170 | Msa0101710 | 0.812342 | 4.449126e-51 | -8.615850e-47 |
| Msa0012040 | Msa0101710 | 0.816142 | 6.442020e-52 | -8.615850e-47 |
| Msa0013050 | Msa0101710 | -0.818178 | 2.244274e-52 | -8.615850e-47 |
| Msa0017510 | Msa0101710 | 0.837398 | 5.321904e-57 | -8.615850e-47 |
| Msa0025730 | Msa0101710 | 0.803776 | 2.966372e-49 | -8.615850e-47 |
| Msa0028640 | Msa0101710 | 0.803119 | 4.058920e-49 | -8.615850e-47 |
| Msa0031340 | Msa0101710 | 0.802706 | 4.939187e-49 | -8.615850e-47 |
| Msa0037700 | Msa0101710 | 0.816080 | 6.648087e-52 | -8.615850e-47 |
| Msa0071240 | Msa0101710 | 0.802127 | 6.501518e-49 | -8.615850e-47 |
| Msa0081930 | Msa0101710 | 0.800785 | 1.224375e-48 | -8.615850e-47 |
| Msa0086650 | Msa0101710 | 0.802004 | 6.891546e-49 | -8.615850e-47 |
| Msa0091570 | Msa0101710 | 0.805774 | 1.134933e-49 | -8.615850e-47 |
| Msa0092990 | Msa0101710 | 0.806757 | 7.043972e-50 | -8.615850e-47 |
| Msa0100090 | Msa0101710 | 0.800598 | 1.337106e-48 | -8.615850e-47 |
| Msa0101700 | Msa0101710 | 0.844317 | 8.149065e-59 | -8.615850e-47 |
| Msa0101710 | Msa0106670 | 0.825763 | 3.925936e-54 | -8.615850e-47 |
| Msa0101710 | Msa0113750 | 0.808414 | 3.134130e-50 | -8.615850e-47 |
| Msa0101710 | Msa0115270 | 0.831583 | 1.537907e-55 | -8.615850e-47 |
| Msa0101710 | Msa0116770 | 0.804873 | 1.752972e-49 | -8.615850e-47 |
| Msa0101710 | Msa0119850 | 0.823213 | 1.563383e-53 | -8.615850e-47 |
| Msa0101710 | Msa0133130 | 0.821612 | 3.681524e-53 | -8.615850e-47 |
| Msa0101710 | Msa0135380 | 0.806144 | 9.484773e-50 | -8.615850e-47 |
| Msa0101710 | Msa0142660 | 0.805081 | 1.585531e-49 | -8.615850e-47 |
| Msa0101710 | Msa0143140 | -0.801533 | 8.611172e-49 | -8.615850e-47 |
| Msa0101710 | Msa0150270 | 0.818170 | 2.254138e-52 | -8.615850e-47 |
| Msa0101710 | Msa0150820 | 0.806129 | 9.554660e-50 | -8.615850e-47 |
| Msa0101710 | Msa0157290 | 0.837228 | 5.881896e-57 | -8.615850e-47 |
| Msa0101710 | Msa0159180 | 0.800454 | 1.430127e-48 | -8.615850e-47 |
| Msa0101710 | Msa0160550 | 0.834878 | 2.323120e-56 | -8.615850e-47 |
| Msa0101710 | Msa0165210 | 0.806899 | 6.572701e-50 | -8.615850e-47 |
| Msa0101710 | Msa0165220 | 0.816679 | 4.882798e-52 | -8.615850e-47 |
| Msa0101710 | Msa0172780 | 0.810024 | 1.415837e-50 | -8.615850e-47 |
| Msa0101710 | Msa0173990 | 0.843315 | 1.511454e-58 | -8.615850e-47 |
| Msa0101710 | Msa0178960 | 0.813885 | 2.040495e-51 | -8.615850e-47 |
| Msa0101710 | Msa0180500 | 0.819161 | 1.342846e-52 | -8.615850e-47 |
| Msa0101710 | Msa0197660 | 0.805512 | 1.288090e-49 | -8.615850e-47 |
| Msa0101710 | Msa0215320 | -0.821304 | 4.335408e-53 | -8.615850e-47 |
| Msa0101710 | Msa0215830 | 0.805448 | 1.328410e-49 | -8.615850e-47 |
| Msa0101710 | Msa0220580 | 0.803416 | 3.522175e-49 | -8.615850e-47 |
| Msa0101710 | Msa0220720 | 0.803530 | 3.336378e-49 | -8.615850e-47 |
| Msa0101710 | Msa0220740 | 0.811040 | 8.541725e-51 | -8.615850e-47 |
| Msa0101710 | Msa0222890 | 0.822948 | 1.802647e-53 | -8.615850e-47 |
| Msa0101710 | Msa0226890 | 0.800626 | 1.319487e-48 | -8.615850e-47 |
| Msa0101710 | Msa0228070 | 0.817732 | 2.830424e-52 | -8.615850e-47 |
| Msa0101710 | Msa0229380 | 0.800053 | 1.726348e-48 | -8.615850e-47 |
| Msa0101710 | Msa0237260 | 0.800569 | 1.355487e-48 | -8.615850e-47 |
| Msa0101710 | Msa0241640 | 0.800748 | 1.245715e-48 | -8.615850e-47 |
| Msa0101710 | Msa0255080 | 0.820823 | 5.596444e-53 | -8.615850e-47 |
| Msa0101710 | Msa0258760 | 0.809051 | 2.289996e-50 | -8.615850e-47 |
| Msa0101710 | Msa0259370 | 0.824808 | 6.602524e-54 | -8.615850e-47 |
| Msa0101710 | Msa0260680 | 0.800489 | 1.407289e-48 | -8.615850e-47 |
| Msa0101710 | Msa0269450 | 0.819483 | 1.134270e-52 | -8.615850e-47 |
| Msa0101710 | Msa0272530 | 0.800376 | 1.483530e-48 | -8.615850e-47 |
| Msa0101710 | Msa0279790 | 0.812932 | 3.306155e-51 | -8.615850e-47 |
| Msa0101710 | Msa0282250 | 0.810033 | 1.409300e-50 | -8.615850e-47 |
| Msa0101710 | Msa0287650 | 0.801431 | 9.035549e-49 | -8.615850e-47 |
| Msa0101710 | Msa0288100 | 0.817889 | 2.608794e-52 | -8.615850e-47 |
| Msa0101710 | Msa0294560 | -0.807155 | 5.802359e-50 | -8.615850e-47 |
| Msa0101710 | Msa0303380 | 0.824268 | 8.851306e-54 | -8.615850e-47 |
| Msa0101710 | Msa0309550 | 0.811055 | 8.479005e-51 | -8.615850e-47 |
| Msa0101710 | Msa0315290 | 0.802657 | 5.054961e-49 | -8.615850e-47 |
| Msa0101710 | Msa0317510 | 0.803524 | 3.345315e-49 | -8.615850e-47 |
| Msa0101710 | Msa0319170 | 0.803201 | 3.902770e-49 | -8.615850e-47 |
| Msa0101710 | Msa0321860 | 0.807588 | 4.698174e-50 | -8.615850e-47 |
| Msa0101710 | Msa0323080 | 0.812432 | 4.251641e-51 | -8.615850e-47 |
| Msa0101710 | Msa0333030 | 0.801814 | 7.539512e-49 | -8.615850e-47 |
| Msa0101710 | Msa0336420 | 0.808952 | 2.405179e-50 | -8.615850e-47 |
| Msa0101710 | Msa0337240 | 0.801008 | 1.102689e-48 | -8.615850e-47 |
| Msa0101710 | Msa0337620 | 0.809654 | 1.700170e-50 | -8.615850e-47 |
| Msa0101710 | Msa0340450 | 0.825359 | 4.892755e-54 | -8.615850e-47 |
| Msa0101710 | Msa0342100 | 0.807679 | 4.492313e-50 | -8.615850e-47 |
| Msa0101710 | Msa0344910 | 0.802568 | 5.274195e-49 | -8.615850e-47 |
| Msa0101710 | Msa0344980 | 0.814375 | 1.590941e-51 | -8.615850e-47 |
| Msa0101710 | Msa0350990 | 0.840724 | 7.317852e-58 | -8.615850e-47 |
| Msa0101710 | Msa0351030 | 0.838078 | 3.561369e-57 | -8.615850e-47 |
| Msa0101710 | Msa0351080 | 0.806322 | 8.704224e-50 | -8.615850e-47 |
| Msa0101710 | Msa0351100 | 0.825661 | 4.149737e-54 | -8.615850e-47 |
| Msa0101710 | Msa0358170 | 0.805588 | 1.241537e-49 | -8.615850e-47 |
| Msa0101710 | Msa0373930 | 0.807547 | 4.791496e-50 | -8.615850e-47 |
| Msa0101710 | Msa0379640 | 0.805688 | 1.183226e-49 | -8.615850e-47 |
| Msa0101710 | Msa0385580 | 0.807569 | 4.740447e-50 | -8.615850e-47 |
| Msa0101710 | Msa0397750 | 0.833418 | 5.394587e-56 | -8.615850e-47 |
| Msa0101710 | Msa0398950 | 0.810451 | 1.145462e-50 | -8.615850e-47 |
| Msa0101710 | Msa0399340 | 0.811098 | 8.296146e-51 | -8.615850e-47 |
| Msa0101710 | Msa0404030 | 0.802290 | 6.019396e-49 | -8.615850e-47 |
| Msa0101710 | Msa0406880 | 0.822889 | 1.860566e-53 | -8.615850e-47 |
| Msa0101710 | Msa0416300 | 0.801998 | 6.910873e-49 | -8.615850e-47 |
| Msa0101710 | Msa0431690 | 0.826870 | 2.139080e-54 | -8.615850e-47 |
| Msa0101710 | Msa0432770 | 0.820513 | 6.590888e-53 | -8.615850e-47 |
| Msa0101710 | Msa0442200 | 0.810672 | 1.025767e-50 | -8.615850e-47 |
| Msa0101710 | Msa0466390 | 0.816732 | 4.751562e-52 | -8.615850e-47 |
| Msa0101710 | Msa0467060 | 0.812586 | 3.935242e-51 | -8.615850e-47 |
| Msa0101710 | Msa0484780 | 0.829418 | 5.205622e-55 | -8.615850e-47 |
| Msa0101710 | Msa0485120 | 0.800869 | 1.176878e-48 | -8.615850e-47 |
| Msa0101710 | Msa0498650 | 0.805039 | 1.617694e-49 | -8.615850e-47 |
| Msa0101710 | Msa0500360 | 0.820777 | 5.733733e-53 | -8.615850e-47 |
| Msa0101710 | Msa0503580 | 0.811348 | 7.321549e-51 | -8.615850e-47 |
| Msa0101710 | Msa0504020 | 0.824846 | 6.468485e-54 | -8.615850e-47 |
| Msa0101710 | Msa0509390 | 0.817542 | 3.124473e-52 | -8.615850e-47 |
| Msa0101710 | Msa0512750 | 0.814038 | 1.888617e-51 | -8.615850e-47 |
| Msa0101710 | Msa0512900 | 0.808313 | 3.293702e-50 | -8.615850e-47 |
| Msa0101710 | Msa0515010 | 0.805982 | 1.026034e-49 | -8.615850e-47 |
| Msa0101710 | Msa0524890 | -0.818148 | 2.279693e-52 | -8.615850e-47 |
| Msa0101710 | Msa0529890 | 0.801569 | 8.465779e-49 | -8.615850e-47 |
| Msa0101710 | Msa0536220 | 0.808856 | 2.521671e-50 | -8.615850e-47 |
| Msa0101710 | Msa0541360 | 0.800433 | 1.444831e-48 | -8.615850e-47 |
| Msa0101710 | Msa0545070 | 0.804716 | 1.890539e-49 | -8.615850e-47 |
| Msa0101710 | Msa0550430 | 0.827019 | 1.971459e-54 | -8.615850e-47 |
| Msa0101710 | Msa0553220 | -0.833858 | 4.188038e-56 | -8.615850e-47 |
| Msa0101710 | Msa0553460 | 0.800311 | 1.529538e-48 | -8.615850e-47 |
| Msa0101710 | Msa0555450 | 0.801830 | 7.480604e-49 | -8.615850e-47 |
| Msa0101710 | Msa0558690 | 0.813077 | 3.071310e-51 | -8.615850e-47 |
| Msa0101710 | Msa0562440 | 0.830411 | 2.981890e-55 | -8.615850e-47 |
| Msa0101710 | Msa0563840 | 0.813772 | 2.160699e-51 | -8.615850e-47 |
| Msa0101710 | Msa0577500 | 0.810804 | 9.608266e-51 | -8.615850e-47 |
| Msa0101710 | Msa0585000 | -0.814884 | 1.227466e-51 | -8.615850e-47 |
| Msa0101710 | Msa0593650 | 0.805450 | 1.327021e-49 | -8.615850e-47 |
| Msa0101710 | Msa0607050 | 0.807832 | 4.168859e-50 | -8.615850e-47 |
| Msa0101710 | Msa0610430 | 0.833289 | 5.810060e-56 | -8.615850e-47 |
| Msa0101710 | Msa0616160 | 0.802187 | 6.320489e-49 | -8.615850e-47 |
| Msa0101710 | Msa0621490 | 0.818796 | 1.625581e-52 | -8.615850e-47 |
| Msa0101710 | Msa0621590 | 0.826258 | 2.994010e-54 | -8.615850e-47 |
| Msa0101710 | Msa0623080 | 0.824265 | 8.865415e-54 | -8.615850e-47 |
| Msa0101710 | Msa0625720 | 0.801834 | 7.466441e-49 | -8.615850e-47 |
| Msa0101710 | Msa0633840 | 0.815683 | 8.153908e-52 | -8.615850e-47 |
| Msa0101710 | Msa0638280 | 0.809049 | 2.292855e-50 | -8.615850e-47 |
| Msa0101710 | Msa0638320 | 0.807322 | 5.349564e-50 | -8.615850e-47 |
| Msa0101710 | Msa0643180 | 0.815206 | 1.041222e-51 | -8.615850e-47 |
| Msa0101710 | Msa0647450 | -0.839169 | 1.860796e-57 | -8.615850e-47 |
| Msa0101710 | Msa0648080 | 0.805070 | 1.594238e-49 | -8.615850e-47 |
| Msa0101710 | Msa0657970 | 0.800503 | 1.397604e-48 | -8.615850e-47 |
| Msa0101710 | Msa0659400 | 0.807622 | 4.619712e-50 | -8.615850e-47 |
| Msa0101710 | Msa0661190 | -0.817589 | 3.048854e-52 | -8.615850e-47 |
| Msa0101710 | Msa0662650 | 0.822913 | 1.836286e-53 | -8.615850e-47 |
| Msa0101710 | Msa0663920 | 0.810342 | 1.208720e-50 | -8.615850e-47 |
| Msa0101710 | Msa0673460 | 0.830776 | 2.426584e-55 | -8.615850e-47 |
| Msa0101710 | Msa0677270 | 0.802572 | 5.263525e-49 | -8.615850e-47 |
| Msa0101710 | Msa0682840 | 0.808961 | 2.394420e-50 | -8.615850e-47 |
| Msa0101710 | Msa0688960 | 0.806923 | 6.498503e-50 | -8.615850e-47 |
| Msa0101710 | Msa0689010 | 0.816467 | 5.448278e-52 | -8.615850e-47 |
| Msa0101710 | Msa0692830 | 0.820944 | 5.247143e-53 | -8.615850e-47 |
| Msa0101710 | Msa0692950 | 0.811960 | 5.391253e-51 | -8.615850e-47 |
| Msa0101710 | Msa0693380 | 0.804807 | 1.809335e-49 | -8.615850e-47 |
| Msa0101710 | Msa0695100 | 0.806696 | 7.257171e-50 | -8.615850e-47 |
| Msa0101710 | Msa0708860 | 0.819462 | 1.147075e-52 | -8.615850e-47 |
| Msa0101710 | Msa0709500 | 0.811116 | 8.223330e-51 | -8.615850e-47 |
| Msa0101710 | Msa0715700 | 0.805152 | 1.532521e-49 | -8.615850e-47 |
| Msa0101710 | Msa0716840 | 0.815775 | 7.776722e-52 | -8.615850e-47 |
| Msa0101710 | Msa0734660 | 0.813841 | 2.086781e-51 | -8.615850e-47 |
| Msa0101710 | Msa0743720 | 0.874432 | 6.783487e-68 | -8.615850e-47 |
| Msa0101710 | Msa0745790 | 0.839421 | 1.601053e-57 | -8.615850e-47 |
| Msa0101710 | Msa0750430 | 0.812438 | 4.239225e-51 | -8.615850e-47 |
| Msa0101710 | Msa0769920 | 0.812701 | 3.714589e-51 | -8.615850e-47 |
| Msa0101710 | Msa0771720 | 0.853620 | 2.118876e-61 | -8.615850e-47 |
| Msa0101710 | Msa0773840 | 0.816691 | 4.854122e-52 | -8.615850e-47 |
| Msa0101710 | Msa0790510 | 0.802038 | 6.782485e-49 | -8.615850e-47 |
| Msa0101710 | Msa0790660 | -0.815059 | 1.122101e-51 | -8.615850e-47 |
| Msa0101710 | Msa0790850 | 0.809137 | 2.195144e-50 | -8.615850e-47 |
| Msa0101710 | Msa0793800 | 0.819634 | 1.047864e-52 | -8.615850e-47 |
| Msa0101710 | Msa0795090 | 0.813457 | 2.534518e-51 | -8.615850e-47 |
| Msa0101710 | Msa0795920 | 0.808979 | 2.373601e-50 | -8.615850e-47 |
| Msa0101710 | Msa0808270 | 0.801451 | 8.950683e-49 | -8.615850e-47 |
| Msa0101710 | Msa0813670 | 0.806511 | 7.937971e-50 | -8.615850e-47 |
| Msa0101710 | Msa0813720 | 0.817351 | 3.450572e-52 | -8.615850e-47 |
| Msa0101710 | Msa0824680 | 0.841793 | 3.830737e-58 | -8.615850e-47 |
| Msa0101710 | Msa0827040 | 0.818095 | 2.343459e-52 | -8.615850e-47 |
| Msa0101710 | Msa0842650 | 0.828796 | 7.367181e-55 | -8.615850e-47 |
| Msa0101710 | Msa0850960 | 0.801457 | 8.921532e-49 | -8.615850e-47 |
| Msa0101710 | Msa0860430 | 0.807150 | 5.816278e-50 | -8.615850e-47 |
| Msa0101710 | Msa0863870 | 0.819287 | 1.257139e-52 | -8.615850e-47 |
| Msa0101710 | Msa0866550 | 0.812021 | 5.227531e-51 | -8.615850e-47 |
| Msa0101710 | Msa0871270 | 0.804542 | 2.054485e-49 | -8.615850e-47 |
| Msa0101710 | Msa0876580 | 0.810775 | 9.745502e-51 | -8.615850e-47 |
| Msa0101710 | Msa0880140 | 0.836510 | 8.969423e-57 | -8.615850e-47 |
| Msa0101710 | Msa0938220 | 0.804924 | 1.709885e-49 | -8.615850e-47 |
| Msa0101710 | Msa0942070 | 0.809235 | 2.091437e-50 | -8.615850e-47 |
| Msa0101710 | Msa0945970 | 0.806595 | 7.622966e-50 | -8.615850e-47 |
| Msa0101710 | Msa0947660 | 0.810615 | 1.055573e-50 | -8.615850e-47 |
| Msa0101710 | Msa0959360 | 0.829301 | 5.556691e-55 | -8.615850e-47 |
| Msa0101710 | Msa0968680 | 0.802753 | 4.831585e-49 | -8.615850e-47 |
| Msa0101710 | Msa0969520 | 0.816984 | 4.171783e-52 | -8.615850e-47 |
| Msa0101710 | Msa0992490 | -0.809738 | 1.631335e-50 | -8.615850e-47 |
| Msa0101710 | Msa0993290 | 0.805827 | 1.106085e-49 | -8.615850e-47 |
| Msa0101710 | Msa0993600 | 0.803939 | 2.743642e-49 | -8.615850e-47 |
| Msa0101710 | Msa1003620 | 0.817982 | 2.486158e-52 | -8.615850e-47 |
| Msa0101710 | Msa1012830 | 0.824894 | 6.301291e-54 | -8.615850e-47 |
| Msa0101710 | Msa1014540 | 0.826800 | 2.223412e-54 | -8.615850e-47 |
| Msa0101710 | Msa1019840 | -0.804961 | 1.679594e-49 | -8.615850e-47 |
| Msa0101710 | Msa1023120 | 0.804245 | 2.369716e-49 | -8.615850e-47 |
| Msa0101710 | Msa1030970 | 0.804525 | 2.071908e-49 | -8.615850e-47 |
| Msa0101710 | Msa1039880 | 0.804090 | 2.551934e-49 | -8.615850e-47 |
| Msa0101710 | Msa1044420 | 0.814429 | 1.547628e-51 | -8.615850e-47 |
| Msa0101710 | Msa1046060 | 0.810228 | 1.279706e-50 | -8.615850e-47 |
| Msa0101710 | Msa1046460 | 0.804227 | 2.390389e-49 | -8.615850e-47 |
| Msa0101710 | Msa1051200 | 0.810639 | 1.043181e-50 | -8.615850e-47 |
| Msa0101710 | Msa1059570 | 0.808298 | 3.317274e-50 | -8.615850e-47 |
| Msa0101710 | Msa1075220 | -0.820856 | 5.498985e-53 | -8.615850e-47 |
| Msa0101710 | Msa1075540 | 0.808481 | 3.031679e-50 | -8.615850e-47 |
| Msa0101710 | Msa1082500 | 0.837434 | 5.210017e-57 | -8.615850e-47 |
| Msa0101710 | Msa1085740 | 0.805969 | 1.032648e-49 | -8.615850e-47 |
| Msa0101710 | Msa1089020 | 0.817452 | 3.273933e-52 | -8.615850e-47 |
| Msa0101710 | Msa1090260 | 0.820314 | 7.324661e-53 | -8.615850e-47 |
| Msa0101710 | Msa1097800 | 0.803503 | 3.378698e-49 | -8.615850e-47 |
| Msa0101710 | Msa1107100 | 0.806876 | 6.647283e-50 | -8.615850e-47 |
| Msa0101710 | Msa1116130 | -0.826422 | 2.737022e-54 | -8.615850e-47 |
| Msa0101710 | Msa1125760 | 0.810020 | 1.418421e-50 | -8.615850e-47 |
| Msa0101710 | Msa1131220 | 0.801514 | 8.685991e-49 | -8.615850e-47 |
| Msa0101710 | Msa1131940 | -0.819361 | 1.209025e-52 | -8.615850e-47 |
| Msa0101710 | Msa1137570 | 0.802666 | 5.035533e-49 | -8.615850e-47 |
| Msa0101710 | Msa1137600 | 0.804708 | 1.897438e-49 | -8.615850e-47 |
| Msa0101710 | Msa1137700 | 0.809492 | 1.842692e-50 | -8.615850e-47 |
| Msa0101710 | Msa1143930 | -0.833681 | 4.639048e-56 | -8.615850e-47 |
| Msa0101710 | Msa1147900 | 0.818729 | 1.683589e-52 | -8.615850e-47 |
| Msa0101710 | Msa1150660 | 0.803445 | 3.473937e-49 | -8.615850e-47 |
| Msa0101710 | Msa1162550 | -0.814598 | 1.420209e-51 | -8.615850e-47 |
| Msa0101710 | Msa1171360 | 0.810872 | 9.286774e-51 | -8.615850e-47 |
| Msa0101710 | Msa1171870 | 0.822184 | 2.713180e-53 | -8.615850e-47 |
| Msa0101710 | Msa1172230 | 0.804178 | 2.446853e-49 | -8.615850e-47 |
| Msa0101710 | Msa1172670 | 0.804273 | 2.338300e-49 | -8.615850e-47 |
| Msa0101710 | Msa1174040 | 0.828749 | 7.560948e-55 | -8.615850e-47 |
| Msa0101710 | Msa1179460 | 0.808894 | 2.474977e-50 | -8.615850e-47 |
| Msa0101710 | Msa1186950 | -0.808503 | 2.999185e-50 | -8.615850e-47 |
| Msa0101710 | Msa1190930 | 0.802851 | 4.609727e-49 | -8.615850e-47 |
| Msa0101710 | Msa1197410 | 0.802439 | 5.608002e-49 | -8.615850e-47 |
| Msa0101710 | Msa1199220 | 0.824798 | 6.638468e-54 | -8.615850e-47 |
| Msa0101710 | Msa1199560 | 0.815344 | 9.700827e-52 | -8.615850e-47 |
| Msa0101710 | Msa1203250 | 0.825119 | 5.576715e-54 | -8.615850e-47 |
| Msa0101710 | Msa1205010 | -0.802478 | 5.503449e-49 | -8.615850e-47 |
| Msa0101710 | Msa1205130 | 0.815341 | 9.716681e-52 | -8.615850e-47 |
| Msa0101710 | Msa1210020 | 0.802467 | 5.532915e-49 | -8.615850e-47 |
| Msa0101710 | Msa1217430 | -0.816285 | 5.985026e-52 | -8.615850e-47 |
| Msa0101710 | Msa1217830 | 0.821242 | 4.480825e-53 | -8.615850e-47 |
| Msa0101710 | Msa1224810 | 0.802229 | 6.193738e-49 | -8.615850e-47 |
| Msa0101710 | Msa1226660 | 0.813810 | 2.120151e-51 | -8.615850e-47 |
| Msa0101710 | Msa1233500 | 0.806818 | 6.837127e-50 | -8.615850e-47 |
| Msa0101710 | Msa1233890 | 0.829619 | 4.652231e-55 | -8.615850e-47 |
| Msa0101710 | Msa1244250 | 0.817502 | 3.190321e-52 | -8.615850e-47 |
| Msa0101710 | Msa1247250 | 0.821777 | 3.370623e-53 | -8.615850e-47 |
| Msa0101710 | Msa1249490 | 0.818765 | 1.652239e-52 | -8.615850e-47 |
| Msa0101710 | Msa1250890 | 0.807725 | 4.392284e-50 | -8.615850e-47 |
| Msa0101710 | Msa1253020 | 0.821019 | 5.043143e-53 | -8.615850e-47 |
| Msa0101710 | Msa1271210 | 0.806763 | 7.023757e-50 | -8.615850e-47 |
| Msa0101710 | Msa1275360 | 0.848581 | 5.595739e-60 | -8.615850e-47 |
| Msa0101710 | Msa1279210 | 0.830050 | 3.651767e-55 | -8.615850e-47 |
| Msa0101710 | Msa1284680 | 0.812284 | 4.580679e-51 | -8.615850e-47 |
| Msa0101710 | Msa1289280 | 0.800150 | 1.649491e-48 | -8.615850e-47 |
| Msa0101710 | Msa1293280 | 0.804518 | 2.078321e-49 | -8.615850e-47 |
| Msa0101710 | Msa1298510 | 0.804878 | 1.748177e-49 | -8.615850e-47 |
| Msa0101710 | Msa1302190 | -0.826474 | 2.659875e-54 | -8.615850e-47 |
| Msa0101710 | Msa1305190 | 0.807874 | 4.083791e-50 | -8.615850e-47 |
| Msa0101710 | Msa1305340 | 0.827238 | 1.746736e-54 | -8.615850e-47 |
| Msa0101710 | Msa1306430 | 0.821745 | 3.428213e-53 | -8.615850e-47 |
| Msa0101710 | Msa1306840 | 0.810511 | 1.111726e-50 | -8.615850e-47 |
| Msa0101710 | Msa1314340 | 0.807418 | 5.103292e-50 | -8.615850e-47 |
| Msa0101710 | Msa1322190 | 0.810946 | 8.951922e-51 | -8.615850e-47 |
| Msa0101710 | Msa1327680 | 0.813812 | 2.117883e-51 | -8.615850e-47 |
| Msa0101710 | Msa1328700 | 0.826793 | 2.231912e-54 | -8.615850e-47 |
| Msa0101710 | Msa1336490 | 0.814363 | 1.600186e-51 | -8.615850e-47 |
| Msa0101710 | Msa1340650 | 0.808162 | 3.546431e-50 | -8.615850e-47 |
| Msa0101710 | Msa1348950 | 0.805019 | 1.633718e-49 | -8.615850e-47 |
| Msa0101710 | Msa1351620 | 0.831006 | 2.131889e-55 | -8.615850e-47 |
| Msa0101710 | Msa1353330 | 0.801367 | 9.311974e-49 | -8.615850e-47 |
| Msa0101710 | Msa1359040 | 0.831553 | 1.563814e-55 | -8.615850e-47 |
| Msa0101710 | Msa1362880 | 0.819521 | 1.111923e-52 | -8.615850e-47 |
| Msa0101710 | Msa1371430 | 0.808741 | 2.668709e-50 | -8.615850e-47 |
| Msa0101710 | Msa1372760 | 0.814678 | 1.363338e-51 | -8.615850e-47 |
| Msa0101710 | Msa1386780 | 0.803504 | 3.378102e-49 | -8.615850e-47 |
| Msa0101710 | Msa1390050 | 0.801368 | 9.307190e-49 | -8.615850e-47 |
| Msa0101710 | Msa1392780 | 0.800718 | 1.263458e-48 | -8.615850e-47 |
| Msa0101710 | Msa1411070 | 0.804301 | 2.307098e-49 | -8.615850e-47 |
| Msa0101710 | Msa1415640 | 0.803111 | 4.074574e-49 | -8.615850e-47 |
| Msa0101710 | Msa1419800 | -0.813891 | 2.034527e-51 | -8.615850e-47 |
| Msa0101710 | Msa1427230 | 0.809273 | 2.052340e-50 | -8.615850e-47 |
| Msa0101710 | Msa1430680 | 0.810202 | 1.296242e-50 | -8.615850e-47 |
| Msa0101710 | Msa1435370 | 0.800565 | 1.357953e-48 | -8.615850e-47 |
| Msa0101710 | Msa1440000 | 0.829267 | 5.665575e-55 | -8.615850e-47 |
| Msa0101710 | Msa1441190 | 0.822106 | 2.829129e-53 | -8.615850e-47 |
| Msa0101710 | Msa1449820 | 0.804819 | 1.798453e-49 | -8.615850e-47 |
| Msa0101710 | Msa1451620 | -0.807562 | 4.757203e-50 | -8.615850e-47 |
| Msa0101710 | Msa1455490 | 0.817081 | 3.966489e-52 | -8.615850e-47 |
| Msa0101710 | Msa1460830 | 0.809469 | 1.863435e-50 | -8.615850e-47 |
| Msa0101710 | Msa1461280 | 0.800601 | 1.335095e-48 | -8.615850e-47 |
| Msa0101710 | Msa1466540 | 0.823058 | 1.698910e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101710 | MtrunA17_Chr1g0154111 | 92.000 | 50 | 4 | 0 | 2 | 51 | 484 | 533 | 2.08e-25 | 97.4 |
| Msa0101710 | MtrunA17_Chr1g0154101 | 75.556 | 45 | 11 | 0 | 2 | 46 | 336 | 380 | 5.02e-17 | 73.6 |
| Msa0101710 | MtrunA17_Chr1g0154241 | 66.667 | 51 | 13 | 1 | 2 | 52 | 173 | 219 | 9.50e-14 | 63.5 |
| Msa0101710 | MtrunA17_Chr1g0154251 | 53.571 | 56 | 25 | 1 | 1 | 55 | 185 | 240 | 2.23e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 17 sgRNAs with CRISPR-Local
Find 21 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGCTAGAATTAGCTTCTT+TGG | 0.160211 | 1_3:+8362854 | None:intergenic |
| GCATCAGCCATGCATTTCTT+AGG | 0.230325 | 1_3:+8362974 | None:intergenic |
| TCGCTAGAATTAGCTTCTTT+GGG | 0.334685 | 1_3:+8362855 | None:intergenic |
| CGAAAGAACACTTGATTTGA+GGG | 0.397450 | 1_3:-8362835 | None:intergenic |
| CATCAGCCATGCATTTCTTA+GGG | 0.401845 | 1_3:+8362975 | None:intergenic |
| CCTCGCTTCTTAGTCTTGAC+AGG | 0.446448 | 1_3:+8362885 | None:intergenic |
| CAGTTTCCCTTCCAGCCAAC+CGG | 0.446590 | 1_3:-8362929 | Msa0101710:CDS |
| GCGAAAGAACACTTGATTTG+AGG | 0.454066 | 1_3:-8362836 | None:intergenic |
| TTTCTGTTTGTAGTTTCAAA+AGG | 0.457908 | 1_3:+8363028 | None:intergenic |
| GTTTCAAAAGGTACGGCTAA+TGG | 0.461542 | 1_3:+8363040 | None:intergenic |
| CCTTCCAGCCAACCGGCAAA+AGG | 0.478631 | 1_3:-8362922 | Msa0101710:CDS |
| GTTTGTAGTTTCAAAAGGTA+CGG | 0.509428 | 1_3:+8363033 | None:intergenic |
| CTAGAATTAGCTTCTTTGGG+TGG | 0.573009 | 1_3:+8362858 | None:intergenic |
| CTTCTTAGTCTTGACAGGCA+CGG | 0.576311 | 1_3:+8362890 | None:intergenic |
| TGCTTCCCCTAAGAAATGCA+TGG | 0.614007 | 1_3:-8362981 | Msa0101710:CDS |
| ATCAGCCATGCATTTCTTAG+GGG | 0.624023 | 1_3:+8362976 | None:intergenic |
| CCTGTCAAGACTAAGAAGCG+AGG | 0.701933 | 1_3:-8362885 | Msa0101710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TTTCTGTTTGTAGTTTCAAA+AGG | + | chr1_3:8362856-8362875 | None:intergenic | 25.0% |
| GTTTGTAGTTTCAAAAGGTA+CGG | + | chr1_3:8362851-8362870 | None:intergenic | 30.0% | |
| ! | AACAGAAAGACTTTTAATGC+TGG | - | chr1_3:8362868-8362887 | Msa0101710:CDS | 30.0% |
| ! | TCGCTAGAATTAGCTTCTTT+GGG | + | chr1_3:8363029-8363048 | None:intergenic | 35.0% |
| ! | TTCGCTAGAATTAGCTTCTT+TGG | + | chr1_3:8363030-8363049 | None:intergenic | 35.0% |
| ! | GTTTCAAAAGGTACGGCTAA+TGG | + | chr1_3:8362844-8362863 | None:intergenic | 40.0% |
| ATCAGCCATGCATTTCTTAG+GGG | + | chr1_3:8362908-8362927 | None:intergenic | 40.0% | |
| CATCAGCCATGCATTTCTTA+GGG | + | chr1_3:8362909-8362928 | None:intergenic | 40.0% | |
| ! | CTAGAATTAGCTTCTTTGGG+TGG | + | chr1_3:8363026-8363045 | None:intergenic | 40.0% |
| TGCTTCCCCTAAGAAATGCA+TGG | - | chr1_3:8362900-8362919 | Msa0101710:CDS | 45.0% | |
| GCATCAGCCATGCATTTCTT+AGG | + | chr1_3:8362910-8362929 | None:intergenic | 45.0% | |
| ! | TTCTTAGTCCTTTTGCCGGT+TGG | + | chr1_3:8362970-8362989 | None:intergenic | 45.0% |
| !! | CTTCTTAGTCTTGACAGGCA+CGG | + | chr1_3:8362994-8363013 | None:intergenic | 45.0% |
| ! | CGGCTTCTTAGTCCTTTTGC+CGG | + | chr1_3:8362974-8362993 | None:intergenic | 50.0% |
| !! | CCTCGCTTCTTAGTCTTGAC+AGG | + | chr1_3:8362999-8363018 | None:intergenic | 50.0% |
| CCTGTCAAGACTAAGAAGCG+AGG | - | chr1_3:8362996-8363015 | Msa0101710:CDS | 50.0% | |
| CAGTTTCCCTTCCAGCCAAC+CGG | - | chr1_3:8362952-8362971 | Msa0101710:CDS | 55.0% | |
| !! | CTTTTGCCGGTTGGCTGGAA+GGG | + | chr1_3:8362961-8362980 | None:intergenic | 55.0% |
| !! | TAGTCCTTTTGCCGGTTGGC+TGG | + | chr1_3:8362966-8362985 | None:intergenic | 55.0% |
| !! | CCTTTTGCCGGTTGGCTGGA+AGG | + | chr1_3:8362962-8362981 | None:intergenic | 60.0% |
| CCTTCCAGCCAACCGGCAAA+AGG | - | chr1_3:8362959-8362978 | Msa0101710:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 8362838 | 8363065 | 8362838 | ID=Msa0101710;Name=Msa0101710 |
| chr1_3 | mRNA | 8362838 | 8363065 | 8362838 | ID=Msa0101710-mRNA-1;Parent=Msa0101710;Name=Msa0101710-mRNA-1;_AED=0.49;_eAED=0.63;_QI=0|-1|0|1|-1|1|1|0|75 |
| chr1_3 | exon | 8362838 | 8363065 | 8362838 | ID=Msa0101710-mRNA-1:exon:3376;Parent=Msa0101710-mRNA-1 |
| chr1_3 | CDS | 8362838 | 8363065 | 8362838 | ID=Msa0101710-mRNA-1:cds;Parent=Msa0101710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
