Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127720 | XP_003626077.1 | 86.643 | 277 | 7 | 3 | 1 | 247 | 1 | 277 | 2.79e-169 | 478 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127720 | sp|Q5NB11|CHI10_ORYSJ | 61.017 | 236 | 63 | 2 | 41 | 247 | 55 | 290 | 3.49e-103 | 304 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127720 | G7KUN3 | 86.643 | 277 | 7 | 3 | 1 | 247 | 1 | 277 | 1.33e-169 | 478 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa1127720 | -0.817452 | 3.274503e-52 | -8.615850e-47 |
| Msa0015070 | Msa1127720 | 0.824185 | 9.256798e-54 | -8.615850e-47 |
| Msa0027020 | Msa1127720 | -0.800108 | 1.682043e-48 | -8.615850e-47 |
| Msa0047560 | Msa1127720 | -0.811577 | 6.529503e-51 | -8.615850e-47 |
| Msa0065520 | Msa1127720 | -0.807499 | 4.905961e-50 | -8.615850e-47 |
| Msa0075080 | Msa1127720 | -0.822198 | 2.692800e-53 | -8.615850e-47 |
| Msa0095890 | Msa1127720 | -0.822646 | 2.119302e-53 | -8.615850e-47 |
| Msa0622450 | Msa1127720 | -0.804747 | 1.861791e-49 | -8.615850e-47 |
| Msa0637700 | Msa1127720 | 0.801129 | 1.041593e-48 | -8.615850e-47 |
| Msa0675630 | Msa1127720 | 0.801017 | 1.098068e-48 | -8.615850e-47 |
| Msa0734700 | Msa1127720 | 0.820456 | 6.793607e-53 | -8.615850e-47 |
| Msa0753590 | Msa1127720 | -0.810117 | 1.351972e-50 | -8.615850e-47 |
| Msa0813610 | Msa1127720 | 0.827709 | 1.347081e-54 | -8.615850e-47 |
| Msa0833200 | Msa1127720 | -0.826226 | 3.046527e-54 | -8.615850e-47 |
| Msa0833980 | Msa1127720 | -0.800432 | 1.445485e-48 | -8.615850e-47 |
| Msa0122930 | Msa1127720 | -0.815584 | 8.579824e-52 | -8.615850e-47 |
| Msa0141090 | Msa1127720 | -0.826204 | 3.084723e-54 | -8.615850e-47 |
| Msa0163690 | Msa1127720 | 0.808981 | 2.371437e-50 | -8.615850e-47 |
| Msa0167160 | Msa1127720 | -0.800710 | 1.268673e-48 | -8.615850e-47 |
| Msa0167570 | Msa1127720 | -0.822841 | 1.909211e-53 | -8.615850e-47 |
| Msa0174760 | Msa1127720 | 0.803627 | 3.185491e-49 | -8.615850e-47 |
| Msa0186240 | Msa1127720 | 0.801435 | 9.014841e-49 | -8.615850e-47 |
| Msa0225080 | Msa1127720 | -0.804212 | 2.407766e-49 | -8.615850e-47 |
| Msa0371010 | Msa1127720 | -0.803686 | 3.096386e-49 | -8.615850e-47 |
| Msa0374840 | Msa1127720 | -0.827256 | 1.729701e-54 | -8.615850e-47 |
| Msa0375100 | Msa1127720 | -0.822148 | 2.765697e-53 | -8.615850e-47 |
| Msa0380470 | Msa1127720 | -0.804464 | 2.133127e-49 | -8.615850e-47 |
| Msa0382020 | Msa1127720 | -0.813857 | 2.069505e-51 | -8.615850e-47 |
| Msa0383460 | Msa1127720 | 0.803753 | 2.998495e-49 | -8.615850e-47 |
| Msa0405200 | Msa1127720 | 0.814102 | 1.828149e-51 | -8.615850e-47 |
| Msa0428270 | Msa1127720 | -0.815184 | 1.052642e-51 | -8.615850e-47 |
| Msa0428300 | Msa1127720 | -0.805540 | 1.270982e-49 | -8.615850e-47 |
| Msa0428720 | Msa1127720 | -0.803933 | 2.751409e-49 | -8.615850e-47 |
| Msa0433090 | Msa1127720 | 0.815989 | 6.968205e-52 | -8.615850e-47 |
| Msa0449500 | Msa1127720 | 0.819062 | 1.414769e-52 | -8.615850e-47 |
| Msa0474660 | Msa1127720 | -0.801684 | 8.017870e-49 | -8.615850e-47 |
| Msa1001120 | Msa1127720 | 0.814084 | 1.844998e-51 | -8.615850e-47 |
| Msa1002550 | Msa1127720 | -0.804630 | 1.969959e-49 | -8.615850e-47 |
| Msa1028890 | Msa1127720 | -0.810906 | 9.128801e-51 | -8.615850e-47 |
| Msa1035050 | Msa1127720 | 0.808082 | 3.688829e-50 | -8.615850e-47 |
| Msa1036260 | Msa1127720 | -0.819734 | 9.938570e-53 | -8.615850e-47 |
| Msa1041250 | Msa1127720 | 0.810789 | 9.679710e-51 | -8.615850e-47 |
| Msa1066770 | Msa1127720 | 0.808203 | 3.476133e-50 | -8.615850e-47 |
| Msa1068010 | Msa1127720 | -0.806828 | 6.804462e-50 | -8.615850e-47 |
| Msa1082980 | Msa1127720 | 0.930233 | 2.206903e-93 | -8.615850e-47 |
| Msa1085820 | Msa1127720 | 0.813681 | 2.263562e-51 | -8.615850e-47 |
| Msa0345050 | Msa1127720 | 0.804538 | 2.059194e-49 | -8.615850e-47 |
| Msa1108560 | Msa1127720 | 0.801516 | 8.680494e-49 | -8.615850e-47 |
| Msa1127720 | Msa1130150 | -0.811699 | 6.144786e-51 | -8.615850e-47 |
| Msa1127720 | Msa1131300 | -0.815340 | 9.721751e-52 | -8.615850e-47 |
| Msa1127720 | Msa1146010 | 0.809666 | 1.690558e-50 | -8.615850e-47 |
| Msa1127720 | Msa1161060 | -0.807361 | 5.248395e-50 | -8.615850e-47 |
| Msa1127720 | Msa1185270 | 0.818230 | 2.184276e-52 | -8.615850e-47 |
| Msa1127720 | Msa1202800 | 0.803919 | 2.769501e-49 | -8.615850e-47 |
| Msa1127720 | Msa1203320 | -0.804966 | 1.675955e-49 | -8.615850e-47 |
| Msa1127720 | Msa1206330 | 0.806880 | 6.636411e-50 | -8.615850e-47 |
| Msa1127720 | Msa1239050 | 0.803242 | 3.827048e-49 | -8.615850e-47 |
| Msa1127720 | Msa1239190 | 0.802569 | 5.271042e-49 | -8.615850e-47 |
| Msa1127720 | Msa1239210 | 0.806271 | 8.918824e-50 | -8.615850e-47 |
| Msa1127720 | Msa1279060 | 0.808787 | 2.608307e-50 | -8.615850e-47 |
| Msa1127720 | Msa1280540 | 0.805514 | 1.286745e-49 | -8.615850e-47 |
| Msa1127720 | Msa1291070 | -0.808909 | 2.456448e-50 | -8.615850e-47 |
| Msa1127720 | Msa1306220 | 0.802624 | 5.136732e-49 | -8.615850e-47 |
| Msa1127720 | Msa1319760 | 0.813602 | 2.355090e-51 | -8.615850e-47 |
| Msa1127720 | Msa1350590 | -0.800461 | 1.425916e-48 | -8.615850e-47 |
| Msa1127720 | Msa1364690 | 0.815024 | 1.142810e-51 | -8.615850e-47 |
| Msa1127720 | Msa1366480 | 0.827259 | 1.726854e-54 | -8.615850e-47 |
| Msa1127720 | Msa1395380 | -0.807037 | 6.147628e-50 | -8.615850e-47 |
| Msa1127720 | Msa1408230 | -0.806007 | 1.013779e-49 | -8.615850e-47 |
| Msa1127720 | Msa1412330 | -0.824554 | 7.581199e-54 | -8.615850e-47 |
| Msa1127720 | Msa1437590 | 0.817405 | 3.354262e-52 | -8.615850e-47 |
| Msa1127720 | Msa1454300 | -0.803782 | 2.957484e-49 | -8.615850e-47 |
| Msa1127720 | Msa1463640 | 0.834838 | 2.377766e-56 | -8.615850e-47 |
| Msa0492330 | Msa1127720 | -0.818275 | 2.134513e-52 | -8.615850e-47 |
| Msa0497680 | Msa1127720 | 0.830925 | 2.231501e-55 | -8.615850e-47 |
| Msa0500580 | Msa1127720 | -0.810309 | 1.229177e-50 | -8.615850e-47 |
| Msa0519070 | Msa1127720 | -0.803044 | 4.205395e-49 | -8.615850e-47 |
| Msa0524710 | Msa1127720 | 0.817643 | 2.965349e-52 | -8.615850e-47 |
| Msa0526990 | Msa1127720 | 0.966656 | 3.256317e-126 | -8.615850e-47 |
| Msa0580890 | Msa1127720 | -0.801588 | 8.387365e-49 | -8.615850e-47 |
| Msa0597820 | Msa1127720 | 0.806100 | 9.691353e-50 | -8.615850e-47 |
| Msa0854230 | Msa1127720 | 0.819738 | 9.917816e-53 | -8.615850e-47 |
| Msa0935840 | Msa1127720 | -0.816577 | 5.148612e-52 | -8.615850e-47 |
| Msa0941420 | Msa1127720 | -0.800331 | 1.515641e-48 | -8.615850e-47 |
| Msa0973010 | Msa1127720 | -0.810212 | 1.289863e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127720 | MtrunA17_Chr7g0270841 | 86.643 | 277 | 7 | 3 | 1 | 247 | 1 | 277 | 2.57e-173 | 478 |
| Msa1127720 | MtrunA17_Chr3g0145981 | 47.521 | 242 | 97 | 3 | 35 | 247 | 91 | 331 | 1.39e-76 | 235 |
| Msa1127720 | MtrunA17_Chr8g0370851 | 45.868 | 242 | 100 | 3 | 35 | 247 | 80 | 319 | 2.65e-73 | 226 |
| Msa1127720 | MtrunA17_Chr8g0370821 | 42.562 | 242 | 108 | 3 | 35 | 247 | 91 | 330 | 6.04e-69 | 215 |
| Msa1127720 | MtrunA17_Chr8g0370831 | 42.975 | 242 | 94 | 3 | 35 | 247 | 82 | 308 | 4.19e-66 | 207 |
| Msa1127720 | MtrunA17_Chr2g0294721 | 32.540 | 252 | 131 | 7 | 35 | 247 | 56 | 307 | 5.94e-35 | 127 |
| Msa1127720 | MtrunA17_Chr7g0221751 | 31.621 | 253 | 135 | 5 | 33 | 247 | 58 | 310 | 2.97e-34 | 125 |
| Msa1127720 | MtrunA17_Chr1g0206111 | 30.769 | 234 | 129 | 4 | 33 | 233 | 61 | 294 | 8.14e-32 | 119 |
| Msa1127720 | MtrunA17_Chr2g0329791 | 29.114 | 237 | 103 | 8 | 35 | 241 | 81 | 282 | 1.02e-26 | 104 |
| Msa1127720 | MtrunA17_Chr2g0329781 | 27.311 | 238 | 111 | 7 | 33 | 241 | 59 | 263 | 4.90e-24 | 97.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1127720 | AT4G01700.1 | 60.526 | 266 | 76 | 2 | 11 | 247 | 14 | 279 | 6.63e-119 | 341 |
| Msa1127720 | AT1G02360.1 | 61.570 | 242 | 64 | 2 | 35 | 247 | 30 | 271 | 3.01e-111 | 321 |
| Msa1127720 | AT1G02360.3 | 61.570 | 242 | 64 | 2 | 35 | 247 | 82 | 323 | 4.20e-111 | 322 |
| Msa1127720 | AT1G02360.2 | 61.570 | 242 | 64 | 2 | 35 | 247 | 76 | 317 | 4.93e-111 | 322 |
| Msa1127720 | AT3G12500.1 | 49.587 | 242 | 92 | 3 | 35 | 247 | 86 | 326 | 9.93e-83 | 251 |
| Msa1127720 | AT3G16920.1 | 32.540 | 252 | 131 | 7 | 35 | 247 | 68 | 319 | 4.00e-35 | 128 |
| Msa1127720 | AT3G16920.2 | 32.540 | 252 | 131 | 7 | 35 | 247 | 92 | 343 | 4.69e-35 | 128 |
| Msa1127720 | AT1G05850.1 | 31.474 | 251 | 134 | 6 | 35 | 247 | 60 | 310 | 2.25e-34 | 125 |
| Msa1127720 | AT1G05850.2 | 31.474 | 251 | 134 | 6 | 35 | 247 | 60 | 310 | 2.25e-34 | 125 |
| Msa1127720 | AT2G43590.1 | 30.342 | 234 | 99 | 8 | 35 | 241 | 68 | 264 | 7.47e-29 | 110 |
| Msa1127720 | AT2G43570.1 | 27.869 | 244 | 108 | 7 | 29 | 241 | 71 | 277 | 2.74e-24 | 98.6 |
| Msa1127720 | AT3G54420.1 | 27.615 | 239 | 108 | 7 | 33 | 241 | 70 | 273 | 1.04e-23 | 96.7 |
| Msa1127720 | AT2G43610.1 | 30.802 | 237 | 99 | 8 | 31 | 241 | 84 | 281 | 1.51e-23 | 96.7 |
| Msa1127720 | AT2G43580.1 | 28.632 | 234 | 103 | 8 | 35 | 241 | 69 | 265 | 2.13e-23 | 95.9 |
| Msa1127720 | AT3G47540.1 | 28.829 | 222 | 106 | 9 | 35 | 241 | 30 | 214 | 1.42e-22 | 92.4 |
| Msa1127720 | AT2G43620.1 | 29.114 | 237 | 103 | 8 | 31 | 241 | 86 | 283 | 3.90e-22 | 92.8 |
| Msa1127720 | AT3G47540.2 | 27.907 | 215 | 103 | 9 | 35 | 234 | 30 | 207 | 1.04e-18 | 83.6 |
| Msa1127720 | AT1G56680.1 | 29.167 | 240 | 102 | 9 | 31 | 241 | 80 | 280 | 1.33e-17 | 80.5 |
| Msa1127720 | AT1G56680.2 | 29.167 | 240 | 102 | 9 | 31 | 241 | 103 | 303 | 2.37e-17 | 80.1 |
| Msa1127720 | AT2G43600.1 | 29.707 | 239 | 99 | 10 | 31 | 241 | 76 | 273 | 7.74e-17 | 78.2 |
| Msa1127720 | AT2G43600.2 | 29.707 | 239 | 99 | 10 | 31 | 241 | 97 | 294 | 1.24e-16 | 77.8 |
Find 54 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGGATACTGGACCTAATT+TGG | 0.146711 | 7_3:+79373575 | Msa1127720:CDS |
| CTTTCCTCCTCTGCATCTTT+AGG | 0.179427 | 7_3:+79372185 | Msa1127720:CDS |
| AGAGAAGAGATTGGTATAAT+AGG | 0.189791 | 7_3:-79372230 | None:intergenic |
| ACCAAATTGAGGAAAATATT+TGG | 0.190558 | 7_3:-79372351 | None:intergenic |
| AGCAATAAAGCAAAATAATA+TGG | 0.234582 | 7_3:-79372162 | None:intergenic |
| TTAGGAGTTGAATCATTTAT+TGG | 0.247252 | 7_3:+79372203 | Msa1127720:CDS |
| TGTGATGGTTGGAAAATATT+TGG | 0.256663 | 7_3:+79373404 | Msa1127720:CDS |
| TCAAAACTGCTCTATGGTTT+TGG | 0.260706 | 7_3:+79373346 | Msa1127720:CDS |
| GCTAATCGCACAGCTGGTTT+TGG | 0.280719 | 7_3:+79373447 | Msa1127720:CDS |
| TGATATGCACAATCCAAATT+AGG | 0.305058 | 7_3:-79373588 | None:intergenic |
| TAGGAGTTGAATCATTTATT+GGG | 0.345727 | 7_3:+79372204 | Msa1127720:CDS |
| AAAGATTGGCCTTGCTTTGA+AGG | 0.347412 | 7_3:+79372542 | Msa1127720:CDS |
| GAGAAGAGATTGGTATAATA+GGG | 0.356153 | 7_3:-79372229 | None:intergenic |
| TTGCTTTCAAAACTGCTCTA+TGG | 0.359827 | 7_3:+79373340 | Msa1127720:CDS |
| AAGCATAAGCCCCAAGAAAA+TGG | 0.365932 | 7_3:-79372473 | None:intergenic |
| GCAAGAGTTAATGATCGAAT+TGG | 0.385700 | 7_3:+79373522 | Msa1127720:CDS |
| AAGTTGTTCAATGTGGATAC+TGG | 0.403395 | 7_3:+79373564 | Msa1127720:CDS |
| CCCCAAGAAAATGGTCCATC+AGG | 0.433362 | 7_3:-79372464 | None:intergenic |
| GCAATAAAGCAAAATAATAT+GGG | 0.436056 | 7_3:-79372161 | None:intergenic |
| TCATTAACTCTTGCATCATC+AGG | 0.440723 | 7_3:-79373513 | None:intergenic |
| GTAGGAATATTGTGTCATAA+AGG | 0.444283 | 7_3:-79372265 | None:intergenic |
| GGGTGGGCCACTGCACCTGA+TGG | 0.450425 | 7_3:+79372449 | Msa1127720:CDS |
| TTACTTATTAGAGAAGAGAT+TGG | 0.451038 | 7_3:-79372239 | None:intergenic |
| TGGAAGCTTCAATGAAGGAT+TGG | 0.458638 | 7_3:-79372331 | None:intergenic |
| GAATCACAGTAGTTACTTTG+AGG | 0.463755 | 7_3:-79372512 | None:intergenic |
| AAATATAGTCAATGGTGGAT+TGG | 0.476185 | 7_3:+79373479 | Msa1127720:CDS |
| ACATTGTGACAAGAAGGTAT+TGG | 0.494924 | 7_3:-79373384 | None:intergenic |
| GTGATTCTACTGACAAAGAT+TGG | 0.496296 | 7_3:+79372528 | Msa1127720:CDS |
| ATATTTGGAAGCTTCAATGA+AGG | 0.511487 | 7_3:-79372336 | None:intergenic |
| GCTTCAATGAAGGATTGGTA+AGG | 0.525028 | 7_3:-79372326 | None:intergenic |
| CAGATTTCACATGAAACTAC+TGG | 0.531637 | 7_3:+79372425 | Msa1127720:CDS |
| ATAGAAGCTAATCGCACAGC+TGG | 0.541134 | 7_3:+79373441 | Msa1127720:CDS |
| AGCTATCTCACGCTTTCTTG+TGG | 0.548914 | 7_3:-79372390 | None:intergenic |
| GGCAAAAGTTACAAAGGAAG+AGG | 0.557753 | 7_3:+79372563 | Msa1127720:CDS |
| ACCATCACATTGTGACAAGA+AGG | 0.564779 | 7_3:-79373390 | None:intergenic |
| ACATGAAACTACTGGTGGGT+GGG | 0.569584 | 7_3:+79372433 | Msa1127720:CDS |
| AACTCCTAAAGATGCAGAGG+AGG | 0.579707 | 7_3:-79372189 | None:intergenic |
| CAACCTGTAGTACCAAATTG+AGG | 0.584601 | 7_3:-79372362 | None:intergenic |
| GTCAATGGTGGATTGGAATG+TGG | 0.588138 | 7_3:+79373486 | Msa1127720:CDS |
| CAATAAAGCAAAATAATATG+GGG | 0.588254 | 7_3:-79372160 | None:intergenic |
| TTTGAAGGCAAAAGTTACAA+AGG | 0.591242 | 7_3:+79372557 | Msa1127720:CDS |
| TCTTGTCACAATGTGATGGT+TGG | 0.593829 | 7_3:+79373393 | Msa1127720:CDS |
| ATGCAGTGTCATCTTTGTGT+AGG | 0.594953 | 7_3:-79372283 | None:intergenic |
| CACATGAAACTACTGGTGGG+TGG | 0.597128 | 7_3:+79372432 | Msa1127720:CDS |
| CTTCAATGAAGGATTGGTAA+GGG | 0.607116 | 7_3:-79372325 | None:intergenic |
| AAATGGTCCATCAGGTGCAG+TGG | 0.617726 | 7_3:-79372456 | None:intergenic |
| GTGACAAATATAGTCAATGG+TGG | 0.618848 | 7_3:+79373474 | Msa1127720:CDS |
| TTGGTGACAAATATAGTCAA+TGG | 0.622222 | 7_3:+79373471 | Msa1127720:CDS |
| TTCAACTCCTAAAGATGCAG+AGG | 0.624622 | 7_3:-79372192 | None:intergenic |
| ACCTTCTTGTCACAATGTGA+TGG | 0.640940 | 7_3:+79373389 | Msa1127720:CDS |
| ATTTCACATGAAACTACTGG+TGG | 0.650794 | 7_3:+79372428 | Msa1127720:CDS |
| AATAAAGCAAAATAATATGG+GGG | 0.669386 | 7_3:-79372159 | None:intergenic |
| ATATACTAAGTTGTTCAATG+TGG | 0.678623 | 7_3:+79373557 | Msa1127720:CDS |
| TTTCACATGAAACTACTGGT+GGG | 0.698219 | 7_3:+79372429 | Msa1127720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTTAGATTAAATTATTATT+TGG | + | chr7_3:79372634-79372653 | Msa1127720:intron | 10.0% |
| !! | TCTTAGATTAAATTATTATT+TGG | + | chr7_3:79372634-79372653 | Msa1127720:intron | 10.0% |
| !! | ATACGAAATAATTACTAAAT+CGG | - | chr7_3:79372841-79372860 | None:intergenic | 15.0% |
| !! | TGTCAACAAAAAAAAAAAAA+AGG | + | chr7_3:79373014-79373033 | Msa1127720:intron | 15.0% |
| !! | ATACGAAATAATTACTAAAT+CGG | - | chr7_3:79372841-79372860 | None:intergenic | 15.0% |
| !! | TGTCAACAAAAAAAAAAAAA+AGG | + | chr7_3:79373014-79373033 | Msa1127720:intron | 15.0% |
| !! | AATAAAGCAAAATAATATGG+GGG | - | chr7_3:79372162-79372181 | None:intergenic | 20.0% |
| !! | CAATAAAGCAAAATAATATG+GGG | - | chr7_3:79372163-79372182 | None:intergenic | 20.0% |
| !! | GCAATAAAGCAAAATAATAT+GGG | - | chr7_3:79372164-79372183 | None:intergenic | 20.0% |
| !! | AGCAATAAAGCAAAATAATA+TGG | - | chr7_3:79372165-79372184 | None:intergenic | 20.0% |
| !! | TACGAAATAATTACTAAATC+GGG | - | chr7_3:79372840-79372859 | None:intergenic | 20.0% |
| !! | TGATTAAGTATAATATGGTT+GGG | - | chr7_3:79373075-79373094 | None:intergenic | 20.0% |
| !! | TTGATTAAGTATAATATGGT+TGG | - | chr7_3:79373076-79373095 | None:intergenic | 20.0% |
| !! | AATAAAGCAAAATAATATGG+GGG | - | chr7_3:79372162-79372181 | None:intergenic | 20.0% |
| !! | CAATAAAGCAAAATAATATG+GGG | - | chr7_3:79372163-79372182 | None:intergenic | 20.0% |
| !! | GCAATAAAGCAAAATAATAT+GGG | - | chr7_3:79372164-79372183 | None:intergenic | 20.0% |
| !! | AGCAATAAAGCAAAATAATA+TGG | - | chr7_3:79372165-79372184 | None:intergenic | 20.0% |
| !! | TACGAAATAATTACTAAATC+GGG | - | chr7_3:79372840-79372859 | None:intergenic | 20.0% |
| !! | TGATTAAGTATAATATGGTT+GGG | - | chr7_3:79373075-79373094 | None:intergenic | 20.0% |
| !! | TTGATTAAGTATAATATGGT+TGG | - | chr7_3:79373076-79373095 | None:intergenic | 20.0% |
| ! | TTAGGAGTTGAATCATTTAT+TGG | + | chr7_3:79372203-79372222 | Msa1127720:CDS | 25.0% |
| ! | TAGGAGTTGAATCATTTATT+GGG | + | chr7_3:79372204-79372223 | Msa1127720:CDS | 25.0% |
| ! | TTACTTATTAGAGAAGAGAT+TGG | - | chr7_3:79372242-79372261 | None:intergenic | 25.0% |
| !! | TCCAAATATTTTCCTCAATT+TGG | + | chr7_3:79372350-79372369 | Msa1127720:CDS | 25.0% |
| ! | ACCAAATTGAGGAAAATATT+TGG | - | chr7_3:79372354-79372373 | None:intergenic | 25.0% |
| !!! | CATAGAAACAATTTTAGGTT+TGG | - | chr7_3:79372693-79372712 | None:intergenic | 25.0% |
| ! | TCGCTTGATTAAGTATAATA+TGG | - | chr7_3:79373080-79373099 | None:intergenic | 25.0% |
| ! | TTGTGTAGGAATTATAACTA+TGG | + | chr7_3:79373249-79373268 | Msa1127720:intron | 25.0% |
| ! | ATATACTAAGTTGTTCAATG+TGG | + | chr7_3:79373557-79373576 | Msa1127720:CDS | 25.0% |
| ! | TTAGGAGTTGAATCATTTAT+TGG | + | chr7_3:79372203-79372222 | Msa1127720:CDS | 25.0% |
| ! | TAGGAGTTGAATCATTTATT+GGG | + | chr7_3:79372204-79372223 | Msa1127720:CDS | 25.0% |
| ! | TTACTTATTAGAGAAGAGAT+TGG | - | chr7_3:79372242-79372261 | None:intergenic | 25.0% |
| !! | TCCAAATATTTTCCTCAATT+TGG | + | chr7_3:79372350-79372369 | Msa1127720:CDS | 25.0% |
| ! | ACCAAATTGAGGAAAATATT+TGG | - | chr7_3:79372354-79372373 | None:intergenic | 25.0% |
| !!! | CATAGAAACAATTTTAGGTT+TGG | - | chr7_3:79372693-79372712 | None:intergenic | 25.0% |
| ! | TCGCTTGATTAAGTATAATA+TGG | - | chr7_3:79373080-79373099 | None:intergenic | 25.0% |
| ! | TTGTGTAGGAATTATAACTA+TGG | + | chr7_3:79373249-79373268 | Msa1127720:intron | 25.0% |
| ! | ATATACTAAGTTGTTCAATG+TGG | + | chr7_3:79373557-79373576 | Msa1127720:CDS | 25.0% |
| GAGAAGAGATTGGTATAATA+GGG | - | chr7_3:79372232-79372251 | None:intergenic | 30.0% | |
| AGAGAAGAGATTGGTATAAT+AGG | - | chr7_3:79372233-79372252 | None:intergenic | 30.0% | |
| GTAGGAATATTGTGTCATAA+AGG | - | chr7_3:79372268-79372287 | None:intergenic | 30.0% | |
| ! | TTGGTAAGGGTAAAAGTTTT+TGG | - | chr7_3:79372315-79372334 | None:intergenic | 30.0% |
| ATATTTGGAAGCTTCAATGA+AGG | - | chr7_3:79372339-79372358 | None:intergenic | 30.0% | |
| TTTGAAGGCAAAAGTTACAA+AGG | + | chr7_3:79372557-79372576 | Msa1127720:CDS | 30.0% | |
| GTATACCAAGATAGTTGAAT+AGG | - | chr7_3:79372590-79372609 | None:intergenic | 30.0% | |
| ! | GAGCTCATAGAAACAATTTT+AGG | - | chr7_3:79372698-79372717 | None:intergenic | 30.0% |
| ! | AGGATCATATGGATTAAAAC+TGG | - | chr7_3:79372771-79372790 | None:intergenic | 30.0% |
| ! | TTTGAAACTAATTTAGCGAC+CGG | - | chr7_3:79372884-79372903 | None:intergenic | 30.0% |
| AGCTAATGAGTTTCAGTTAA+AGG | + | chr7_3:79373112-79373131 | Msa1127720:intron | 30.0% | |
| TACACAAAAGTTTATGAGAG+GGG | - | chr7_3:79373236-79373255 | None:intergenic | 30.0% | |
| CTACACAAAAGTTTATGAGA+GGG | - | chr7_3:79373237-79373256 | None:intergenic | 30.0% | |
| GAATTGTTTGATACAATCTC+TGG | - | chr7_3:79373315-79373334 | None:intergenic | 30.0% | |
| TGTGATGGTTGGAAAATATT+TGG | + | chr7_3:79373404-79373423 | Msa1127720:CDS | 30.0% | |
| ! | TTGGTGACAAATATAGTCAA+TGG | + | chr7_3:79373471-79373490 | Msa1127720:CDS | 30.0% |
| !! | AAATATAGTCAATGGTGGAT+TGG | + | chr7_3:79373479-79373498 | Msa1127720:CDS | 30.0% |
| TGATATGCACAATCCAAATT+AGG | - | chr7_3:79373591-79373610 | None:intergenic | 30.0% | |
| GAGAAGAGATTGGTATAATA+GGG | - | chr7_3:79372232-79372251 | None:intergenic | 30.0% | |
| AGAGAAGAGATTGGTATAAT+AGG | - | chr7_3:79372233-79372252 | None:intergenic | 30.0% | |
| GTAGGAATATTGTGTCATAA+AGG | - | chr7_3:79372268-79372287 | None:intergenic | 30.0% | |
| ! | TTGGTAAGGGTAAAAGTTTT+TGG | - | chr7_3:79372315-79372334 | None:intergenic | 30.0% |
| ATATTTGGAAGCTTCAATGA+AGG | - | chr7_3:79372339-79372358 | None:intergenic | 30.0% | |
| TTTGAAGGCAAAAGTTACAA+AGG | + | chr7_3:79372557-79372576 | Msa1127720:CDS | 30.0% | |
| GTATACCAAGATAGTTGAAT+AGG | - | chr7_3:79372590-79372609 | None:intergenic | 30.0% | |
| ! | GAGCTCATAGAAACAATTTT+AGG | - | chr7_3:79372698-79372717 | None:intergenic | 30.0% |
| ! | AGGATCATATGGATTAAAAC+TGG | - | chr7_3:79372771-79372790 | None:intergenic | 30.0% |
| ! | TTTGAAACTAATTTAGCGAC+CGG | - | chr7_3:79372884-79372903 | None:intergenic | 30.0% |
| AGCTAATGAGTTTCAGTTAA+AGG | + | chr7_3:79373112-79373131 | Msa1127720:intron | 30.0% | |
| TACACAAAAGTTTATGAGAG+GGG | - | chr7_3:79373236-79373255 | None:intergenic | 30.0% | |
| CTACACAAAAGTTTATGAGA+GGG | - | chr7_3:79373237-79373256 | None:intergenic | 30.0% | |
| GAATTGTTTGATACAATCTC+TGG | - | chr7_3:79373315-79373334 | None:intergenic | 30.0% | |
| TGTGATGGTTGGAAAATATT+TGG | + | chr7_3:79373404-79373423 | Msa1127720:CDS | 30.0% | |
| ! | TTGGTGACAAATATAGTCAA+TGG | + | chr7_3:79373471-79373490 | Msa1127720:CDS | 30.0% |
| !! | AAATATAGTCAATGGTGGAT+TGG | + | chr7_3:79373479-79373498 | Msa1127720:CDS | 30.0% |
| TGATATGCACAATCCAAATT+AGG | - | chr7_3:79373591-79373610 | None:intergenic | 30.0% | |
| AAATAATATGGGGGTGAGAA+TGG | - | chr7_3:79372153-79372172 | None:intergenic | 35.0% | |
| !!! | TAAGGGTAAAAGTTTTTGGC+AGG | - | chr7_3:79372311-79372330 | None:intergenic | 35.0% |
| ! | CTTCAATGAAGGATTGGTAA+GGG | - | chr7_3:79372328-79372347 | None:intergenic | 35.0% |
| TTTCCTCAATTTGGTACTAC+AGG | + | chr7_3:79372359-79372378 | Msa1127720:intron | 35.0% | |
| CAGATTTCACATGAAACTAC+TGG | + | chr7_3:79372425-79372444 | Msa1127720:CDS | 35.0% | |
| ATTTCACATGAAACTACTGG+TGG | + | chr7_3:79372428-79372447 | Msa1127720:CDS | 35.0% | |
| TTTCACATGAAACTACTGGT+GGG | + | chr7_3:79372429-79372448 | Msa1127720:CDS | 35.0% | |
| ! | GAATCACAGTAGTTACTTTG+AGG | - | chr7_3:79372515-79372534 | None:intergenic | 35.0% |
| GTGATTCTACTGACAAAGAT+TGG | + | chr7_3:79372528-79372547 | Msa1127720:CDS | 35.0% | |
| ! | TAACTTTTGCCTTCAAAGCA+AGG | - | chr7_3:79372554-79372573 | None:intergenic | 35.0% |
| TGTGGATTTGGACAAAGAAT+TGG | - | chr7_3:79372667-79372686 | None:intergenic | 35.0% | |
| !!! | CAATTTTAGGTTTGGATGTG+TGG | - | chr7_3:79372685-79372704 | None:intergenic | 35.0% |
| AGCAGCGTTAAAATTCTTGA+CGG | + | chr7_3:79372745-79372764 | Msa1127720:intron | 35.0% | |
| AAAACTTATTTCCCAAGCTG+AGG | - | chr7_3:79372796-79372815 | None:intergenic | 35.0% | |
| TATTTCGTATCTGTAGTGAC+CGG | + | chr7_3:79372851-79372870 | Msa1127720:intron | 35.0% | |
| CCTACACAAAAGTTTATGAG+AGG | - | chr7_3:79373238-79373257 | None:intergenic | 35.0% | |
| ! | CCTCTCATAAACTTTTGTGT+AGG | + | chr7_3:79373235-79373254 | Msa1127720:intron | 35.0% |
| AATTATAACTATGGACCAGC+AGG | + | chr7_3:79373258-79373277 | Msa1127720:intron | 35.0% | |
| ATTATAACTATGGACCAGCA+GGG | + | chr7_3:79373259-79373278 | Msa1127720:intron | 35.0% | |
| TTGCTTTCAAAACTGCTCTA+TGG | + | chr7_3:79373340-79373359 | Msa1127720:CDS | 35.0% | |
| ! | TCAAAACTGCTCTATGGTTT+TGG | + | chr7_3:79373346-79373365 | Msa1127720:CDS | 35.0% |
| ! | ACATTGTGACAAGAAGGTAT+TGG | - | chr7_3:79373387-79373406 | None:intergenic | 35.0% |
| GTGACAAATATAGTCAATGG+TGG | + | chr7_3:79373474-79373493 | Msa1127720:CDS | 35.0% | |
| TCATTAACTCTTGCATCATC+AGG | - | chr7_3:79373516-79373535 | None:intergenic | 35.0% | |
| GCAAGAGTTAATGATCGAAT+TGG | + | chr7_3:79373522-79373541 | Msa1127720:CDS | 35.0% | |
| AAGTTGTTCAATGTGGATAC+TGG | + | chr7_3:79373564-79373583 | Msa1127720:CDS | 35.0% | |
| AAATAATATGGGGGTGAGAA+TGG | - | chr7_3:79372153-79372172 | None:intergenic | 35.0% | |
| !!! | TAAGGGTAAAAGTTTTTGGC+AGG | - | chr7_3:79372311-79372330 | None:intergenic | 35.0% |
| ! | CTTCAATGAAGGATTGGTAA+GGG | - | chr7_3:79372328-79372347 | None:intergenic | 35.0% |
| TTTCCTCAATTTGGTACTAC+AGG | + | chr7_3:79372359-79372378 | Msa1127720:intron | 35.0% | |
| CAGATTTCACATGAAACTAC+TGG | + | chr7_3:79372425-79372444 | Msa1127720:CDS | 35.0% | |
| ATTTCACATGAAACTACTGG+TGG | + | chr7_3:79372428-79372447 | Msa1127720:CDS | 35.0% | |
| TTTCACATGAAACTACTGGT+GGG | + | chr7_3:79372429-79372448 | Msa1127720:CDS | 35.0% | |
| ! | GAATCACAGTAGTTACTTTG+AGG | - | chr7_3:79372515-79372534 | None:intergenic | 35.0% |
| GTGATTCTACTGACAAAGAT+TGG | + | chr7_3:79372528-79372547 | Msa1127720:CDS | 35.0% | |
| ! | TAACTTTTGCCTTCAAAGCA+AGG | - | chr7_3:79372554-79372573 | None:intergenic | 35.0% |
| TGTGGATTTGGACAAAGAAT+TGG | - | chr7_3:79372667-79372686 | None:intergenic | 35.0% | |
| !!! | CAATTTTAGGTTTGGATGTG+TGG | - | chr7_3:79372685-79372704 | None:intergenic | 35.0% |
| AGCAGCGTTAAAATTCTTGA+CGG | + | chr7_3:79372745-79372764 | Msa1127720:intron | 35.0% | |
| AAAACTTATTTCCCAAGCTG+AGG | - | chr7_3:79372796-79372815 | None:intergenic | 35.0% | |
| TATTTCGTATCTGTAGTGAC+CGG | + | chr7_3:79372851-79372870 | Msa1127720:intron | 35.0% | |
| CCTACACAAAAGTTTATGAG+AGG | - | chr7_3:79373238-79373257 | None:intergenic | 35.0% | |
| ! | CCTCTCATAAACTTTTGTGT+AGG | + | chr7_3:79373235-79373254 | Msa1127720:intron | 35.0% |
| AATTATAACTATGGACCAGC+AGG | + | chr7_3:79373258-79373277 | Msa1127720:intron | 35.0% | |
| ATTATAACTATGGACCAGCA+GGG | + | chr7_3:79373259-79373278 | Msa1127720:intron | 35.0% | |
| TTGCTTTCAAAACTGCTCTA+TGG | + | chr7_3:79373340-79373359 | Msa1127720:CDS | 35.0% | |
| ! | TCAAAACTGCTCTATGGTTT+TGG | + | chr7_3:79373346-79373365 | Msa1127720:CDS | 35.0% |
| ! | ACATTGTGACAAGAAGGTAT+TGG | - | chr7_3:79373387-79373406 | None:intergenic | 35.0% |
| GTGACAAATATAGTCAATGG+TGG | + | chr7_3:79373474-79373493 | Msa1127720:CDS | 35.0% | |
| TCATTAACTCTTGCATCATC+AGG | - | chr7_3:79373516-79373535 | None:intergenic | 35.0% | |
| GCAAGAGTTAATGATCGAAT+TGG | + | chr7_3:79373522-79373541 | Msa1127720:CDS | 35.0% | |
| AAGTTGTTCAATGTGGATAC+TGG | + | chr7_3:79373564-79373583 | Msa1127720:CDS | 35.0% | |
| TTCAACTCCTAAAGATGCAG+AGG | - | chr7_3:79372195-79372214 | None:intergenic | 40.0% | |
| ATGCAGTGTCATCTTTGTGT+AGG | - | chr7_3:79372286-79372305 | None:intergenic | 40.0% | |
| ! | GCTTCAATGAAGGATTGGTA+AGG | - | chr7_3:79372329-79372348 | None:intergenic | 40.0% |
| TGGAAGCTTCAATGAAGGAT+TGG | - | chr7_3:79372334-79372353 | None:intergenic | 40.0% | |
| CAACCTGTAGTACCAAATTG+AGG | - | chr7_3:79372365-79372384 | None:intergenic | 40.0% | |
| !! | ACCTGATGGACCATTTTCTT+GGG | + | chr7_3:79372463-79372482 | Msa1127720:CDS | 40.0% |
| AAGCATAAGCCCCAAGAAAA+TGG | - | chr7_3:79372476-79372495 | None:intergenic | 40.0% | |
| !! | AAAGATTGGCCTTGCTTTGA+AGG | + | chr7_3:79372542-79372561 | Msa1127720:CDS | 40.0% |
| GGCAAAAGTTACAAAGGAAG+AGG | + | chr7_3:79372563-79372582 | Msa1127720:CDS | 40.0% | |
| GAGGTCCTATTCAACTATCT+TGG | + | chr7_3:79372582-79372601 | Msa1127720:intron | 40.0% | |
| TAGGTTTGGATGTGTGGATT+TGG | - | chr7_3:79372679-79372698 | None:intergenic | 40.0% | |
| ! | TGTAGTGACCGGTTTATAAC+CGG | + | chr7_3:79372862-79372881 | Msa1127720:intron | 40.0% |
| TTTAGCGACCGGTTATAAAC+CGG | - | chr7_3:79372873-79372892 | None:intergenic | 40.0% | |
| ACCTTCTTGTCACAATGTGA+TGG | + | chr7_3:79373389-79373408 | Msa1127720:CDS | 40.0% | |
| ACCATCACATTGTGACAAGA+AGG | - | chr7_3:79373393-79373412 | None:intergenic | 40.0% | |
| TCTTGTCACAATGTGATGGT+TGG | + | chr7_3:79373393-79373412 | Msa1127720:CDS | 40.0% | |
| TGTGGATACTGGACCTAATT+TGG | + | chr7_3:79373575-79373594 | Msa1127720:CDS | 40.0% | |
| TTCAACTCCTAAAGATGCAG+AGG | - | chr7_3:79372195-79372214 | None:intergenic | 40.0% | |
| ATGCAGTGTCATCTTTGTGT+AGG | - | chr7_3:79372286-79372305 | None:intergenic | 40.0% | |
| ! | GCTTCAATGAAGGATTGGTA+AGG | - | chr7_3:79372329-79372348 | None:intergenic | 40.0% |
| TGGAAGCTTCAATGAAGGAT+TGG | - | chr7_3:79372334-79372353 | None:intergenic | 40.0% | |
| CAACCTGTAGTACCAAATTG+AGG | - | chr7_3:79372365-79372384 | None:intergenic | 40.0% | |
| !! | ACCTGATGGACCATTTTCTT+GGG | + | chr7_3:79372463-79372482 | Msa1127720:CDS | 40.0% |
| AAGCATAAGCCCCAAGAAAA+TGG | - | chr7_3:79372476-79372495 | None:intergenic | 40.0% | |
| !! | AAAGATTGGCCTTGCTTTGA+AGG | + | chr7_3:79372542-79372561 | Msa1127720:CDS | 40.0% |
| GGCAAAAGTTACAAAGGAAG+AGG | + | chr7_3:79372563-79372582 | Msa1127720:CDS | 40.0% | |
| GAGGTCCTATTCAACTATCT+TGG | + | chr7_3:79372582-79372601 | Msa1127720:intron | 40.0% | |
| TAGGTTTGGATGTGTGGATT+TGG | - | chr7_3:79372679-79372698 | None:intergenic | 40.0% | |
| ! | TGTAGTGACCGGTTTATAAC+CGG | + | chr7_3:79372862-79372881 | Msa1127720:intron | 40.0% |
| TTTAGCGACCGGTTATAAAC+CGG | - | chr7_3:79372873-79372892 | None:intergenic | 40.0% | |
| ACCTTCTTGTCACAATGTGA+TGG | + | chr7_3:79373389-79373408 | Msa1127720:CDS | 40.0% | |
| ACCATCACATTGTGACAAGA+AGG | - | chr7_3:79373393-79373412 | None:intergenic | 40.0% | |
| TCTTGTCACAATGTGATGGT+TGG | + | chr7_3:79373393-79373412 | Msa1127720:CDS | 40.0% | |
| TGTGGATACTGGACCTAATT+TGG | + | chr7_3:79373575-79373594 | Msa1127720:CDS | 40.0% | |
| CTTTCCTCCTCTGCATCTTT+AGG | + | chr7_3:79372185-79372204 | Msa1127720:CDS | 45.0% | |
| AACTCCTAAAGATGCAGAGG+AGG | - | chr7_3:79372192-79372211 | None:intergenic | 45.0% | |
| AGCTATCTCACGCTTTCTTG+TGG | - | chr7_3:79372393-79372412 | None:intergenic | 45.0% | |
| ! | ACATGAAACTACTGGTGGGT+GGG | + | chr7_3:79372433-79372452 | Msa1127720:CDS | 45.0% |
| !! | CACCTGATGGACCATTTTCT+TGG | + | chr7_3:79372462-79372481 | Msa1127720:CDS | 45.0% |
| !! | CCTGATGGACCATTTTCTTG+GGG | + | chr7_3:79372464-79372483 | Msa1127720:CDS | 45.0% |
| AAGCTGAGGTGAGGATCATA+TGG | - | chr7_3:79372782-79372801 | None:intergenic | 45.0% | |
| ATATGATCCTCACCTCAGCT+TGG | + | chr7_3:79372781-79372800 | Msa1127720:intron | 45.0% | |
| TATGATCCTCACCTCAGCTT+GGG | + | chr7_3:79372782-79372801 | Msa1127720:intron | 45.0% | |
| TTATTTCCCAAGCTGAGGTG+AGG | - | chr7_3:79372791-79372810 | None:intergenic | 45.0% | |
| !! | GGAAGGCGTTAGGATTTGAT+GGG | + | chr7_3:79373280-79373299 | Msa1127720:intron | 45.0% |
| ATAGAAGCTAATCGCACAGC+TGG | + | chr7_3:79373441-79373460 | Msa1127720:CDS | 45.0% | |
| !! | GTCAATGGTGGATTGGAATG+TGG | + | chr7_3:79373486-79373505 | Msa1127720:CDS | 45.0% |
| CTTTCCTCCTCTGCATCTTT+AGG | + | chr7_3:79372185-79372204 | Msa1127720:CDS | 45.0% | |
| AACTCCTAAAGATGCAGAGG+AGG | - | chr7_3:79372192-79372211 | None:intergenic | 45.0% | |
| AGCTATCTCACGCTTTCTTG+TGG | - | chr7_3:79372393-79372412 | None:intergenic | 45.0% | |
| ! | ACATGAAACTACTGGTGGGT+GGG | + | chr7_3:79372433-79372452 | Msa1127720:CDS | 45.0% |
| !! | CACCTGATGGACCATTTTCT+TGG | + | chr7_3:79372462-79372481 | Msa1127720:CDS | 45.0% |
| !! | CCTGATGGACCATTTTCTTG+GGG | + | chr7_3:79372464-79372483 | Msa1127720:CDS | 45.0% |
| AAGCTGAGGTGAGGATCATA+TGG | - | chr7_3:79372782-79372801 | None:intergenic | 45.0% | |
| ATATGATCCTCACCTCAGCT+TGG | + | chr7_3:79372781-79372800 | Msa1127720:intron | 45.0% | |
| TATGATCCTCACCTCAGCTT+GGG | + | chr7_3:79372782-79372801 | Msa1127720:intron | 45.0% | |
| TTATTTCCCAAGCTGAGGTG+AGG | - | chr7_3:79372791-79372810 | None:intergenic | 45.0% | |
| !! | GGAAGGCGTTAGGATTTGAT+GGG | + | chr7_3:79373280-79373299 | Msa1127720:intron | 45.0% |
| ATAGAAGCTAATCGCACAGC+TGG | + | chr7_3:79373441-79373460 | Msa1127720:CDS | 45.0% | |
| !! | GTCAATGGTGGATTGGAATG+TGG | + | chr7_3:79373486-79373505 | Msa1127720:CDS | 45.0% |
| CACATGAAACTACTGGTGGG+TGG | + | chr7_3:79372432-79372451 | Msa1127720:CDS | 50.0% | |
| AAATGGTCCATCAGGTGCAG+TGG | - | chr7_3:79372459-79372478 | None:intergenic | 50.0% | |
| CCCCAAGAAAATGGTCCATC+AGG | - | chr7_3:79372467-79372486 | None:intergenic | 50.0% | |
| TAACTATGGACCAGCAGGGA+AGG | + | chr7_3:79373263-79373282 | Msa1127720:intron | 50.0% | |
| !! | GGGAAGGCGTTAGGATTTGA+TGG | + | chr7_3:79373279-79373298 | Msa1127720:intron | 50.0% |
| !! | GCTAATCGCACAGCTGGTTT+TGG | + | chr7_3:79373447-79373466 | Msa1127720:CDS | 50.0% |
| !!! | TCGCACAGCTGGTTTTGGAT+TGG | + | chr7_3:79373452-79373471 | Msa1127720:CDS | 50.0% |
| CACATGAAACTACTGGTGGG+TGG | + | chr7_3:79372432-79372451 | Msa1127720:CDS | 50.0% | |
| AAATGGTCCATCAGGTGCAG+TGG | - | chr7_3:79372459-79372478 | None:intergenic | 50.0% | |
| CCCCAAGAAAATGGTCCATC+AGG | - | chr7_3:79372467-79372486 | None:intergenic | 50.0% | |
| TAACTATGGACCAGCAGGGA+AGG | + | chr7_3:79373263-79373282 | Msa1127720:intron | 50.0% | |
| !! | GGGAAGGCGTTAGGATTTGA+TGG | + | chr7_3:79373279-79373298 | Msa1127720:intron | 50.0% |
| !! | GCTAATCGCACAGCTGGTTT+TGG | + | chr7_3:79373447-79373466 | Msa1127720:CDS | 50.0% |
| !!! | TCGCACAGCTGGTTTTGGAT+TGG | + | chr7_3:79373452-79373471 | Msa1127720:CDS | 50.0% |
| AATCCTAACGCCTTCCCTGC+TGG | - | chr7_3:79373276-79373295 | None:intergenic | 55.0% | |
| AATCCTAACGCCTTCCCTGC+TGG | - | chr7_3:79373276-79373295 | None:intergenic | 55.0% | |
| !! | GGACCAGCAGGGAAGGCGTT+AGG | + | chr7_3:79373270-79373289 | Msa1127720:intron | 65.0% |
| !! | GGACCAGCAGGGAAGGCGTT+AGG | + | chr7_3:79373270-79373289 | Msa1127720:intron | 65.0% |
| GGGTGGGCCACTGCACCTGA+TGG | + | chr7_3:79372449-79372468 | Msa1127720:CDS | 70.0% | |
| GGGTGGGCCACTGCACCTGA+TGG | + | chr7_3:79372449-79372468 | Msa1127720:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 79372140 | 79373623 | 79372140 | ID=Msa1127720;Name=Msa1127720 |
| chr7_3 | mRNA | 79372140 | 79373623 | 79372140 | ID=Msa1127720-mRNA-1;Parent=Msa1127720;Name=Msa1127720-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0|0|1|0.5|0.66|3|0|247 |
| chr7_3 | exon | 79372140 | 79372371 | 79372140 | ID=Msa1127720-mRNA-1:exon:22438;Parent=Msa1127720-mRNA-1 |
| chr7_3 | exon | 79372381 | 79372584 | 79372381 | ID=Msa1127720-mRNA-1:exon:22439;Parent=Msa1127720-mRNA-1 |
| chr7_3 | exon | 79373316 | 79373623 | 79373316 | ID=Msa1127720-mRNA-1:exon:22440;Parent=Msa1127720-mRNA-1 |
| chr7_3 | CDS | 79372140 | 79372371 | 79372140 | ID=Msa1127720-mRNA-1:cds;Parent=Msa1127720-mRNA-1 |
| chr7_3 | CDS | 79372381 | 79372584 | 79372381 | ID=Msa1127720-mRNA-1:cds;Parent=Msa1127720-mRNA-1 |
| chr7_3 | CDS | 79373316 | 79373623 | 79373316 | ID=Msa1127720-mRNA-1:cds;Parent=Msa1127720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
