AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0174760


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0174760 MtrunA17_Chr1g0195521 97.783 451 3 1 1 444 1 451 0.0 905
Msa0174760 MtrunA17_Chr4g0067461 68.456 447 114 4 1 444 1 423 0.0 606
Msa0174760 MtrunA17_Chr4g0031131 70.245 326 87 2 115 439 29 345 3.84e-166 471
Msa0174760 MtrunA17_Chr2g0327981 70.938 320 83 2 115 433 35 345 1.22e-163 464
Msa0174760 MtrunA17_Chr1g0182091 84.956 226 34 0 216 441 5 230 2.03e-142 406
Msa0174760 MtrunA17_Chr1g0182071 56.250 208 79 3 8 215 14 209 1.54e-67 214
Msa0174760 MtrunA17_Chr4g0027491 28.302 371 195 14 105 418 5 361 4.80e-26 108
Msa0174760 MtrunA17_Chr7g0274131 27.353 340 214 11 118 443 29 349 7.45e-26 108
Msa0174760 MtrunA17_Chr1g0190771 26.506 332 223 9 118 440 28 347 1.18e-25 107
Msa0174760 MtrunA17_Chr1g0208111 27.855 359 197 12 116 422 17 365 1.68e-25 107
Msa0174760 MtrunA17_Chr1g0208571 27.616 344 199 12 116 422 17 347 3.56e-23 100
Msa0174760 MtrunA17_Chr8g0359401 27.950 322 195 14 120 422 9 312 7.71e-22 98.6
Msa0174760 MtrunA17_Chr1g0147841 25.228 329 213 13 120 431 7 319 1.03e-20 95.1
Msa0174760 MtrunA17_Chr7g0230291 26.464 427 228 17 42 426 24 406 1.37e-20 93.6
Msa0174760 MtrunA17_Chr2g0314601 27.500 320 199 14 120 422 9 312 1.46e-20 94.7
Msa0174760 MtrunA17_Chr4g0073351 27.072 362 205 15 98 426 84 419 4.80e-20 92.0
Msa0174760 MtrunA17_Chr3g0121661 25.057 435 253 20 27 422 19 419 5.01e-18 85.9
Msa0174760 MtrunA17_Chr4g0011281 25.434 346 206 12 115 426 98 425 8.37e-18 85.5
Msa0174760 MtrunA17_Chr5g0398811 26.531 343 200 12 118 426 90 414 6.20e-16 79.7
Msa0174760 MtrunA17_Chr4g0056941 25.721 451 256 19 12 422 2 413 7.63e-16 79.3
Msa0174760 MtrunA17_Chr4g0076751 27.410 332 201 14 120 420 27 349 2.40e-14 74.3
Msa0174760 MtrunA17_Chr5g0396571 26.300 327 199 15 120 415 6 321 1.29e-13 72.0
Msa0174760 MtrunA17_Chr8g0388261 25.664 339 186 14 120 415 6 321 3.85e-13 70.5
Msa0174760 MtrunA17_Chr5g0396581 25.382 327 202 15 120 415 49 364 1.62e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0174760 AT3G62830.2 77.655 452 69 5 1 440 1 432 0.0 708
Msa0174760 AT3G62830.1 77.655 452 69 5 1 440 1 432 0.0 708
Msa0174760 AT2G47650.1 78.076 447 76 5 1 439 1 433 0.0 701
Msa0174760 AT2G47650.2 77.042 453 76 6 1 439 1 439 0.0 693
Msa0174760 AT3G53520.1 71.362 426 103 4 19 441 25 434 0.0 612
Msa0174760 AT3G53520.2 70.892 426 103 5 19 441 25 432 0.0 603
Msa0174760 AT3G53520.4 66.519 451 105 5 19 441 25 457 0.0 590
Msa0174760 AT2G28760.4 71.875 320 80 2 115 433 59 369 1.19e-168 479
Msa0174760 AT2G28760.1 71.875 320 80 2 115 433 28 338 2.09e-168 477
Msa0174760 AT2G28760.2 71.875 320 80 2 115 433 28 338 2.09e-168 477
Msa0174760 AT2G28760.3 71.875 320 80 2 115 433 28 338 2.09e-168 477
Msa0174760 AT3G46440.2 70.462 325 85 3 115 438 26 340 1.35e-166 472
Msa0174760 AT3G46440.1 70.462 325 85 3 115 438 26 340 1.35e-166 472
Msa0174760 AT5G59290.2 70.978 317 82 2 118 433 45 352 1.48e-165 470
Msa0174760 AT5G59290.1 70.978 317 82 2 118 433 30 337 1.51e-165 469
Msa0174760 AT5G59290.4 70.978 317 82 2 118 433 1 308 3.63e-165 467
Msa0174760 AT5G59290.3 70.978 317 82 2 118 433 23 330 1.11e-164 467
Msa0174760 AT3G53520.3 71.733 329 74 4 19 344 25 337 3.93e-164 466
Msa0174760 AT1G08200.1 28.412 359 187 15 116 418 16 360 1.38e-26 110
Msa0174760 AT2G27860.1 28.291 357 186 14 118 418 18 360 2.84e-26 110
Msa0174760 AT5G28840.2 27.596 337 222 10 116 443 26 349 7.64e-25 105
Msa0174760 AT5G28840.1 27.596 337 222 10 116 443 26 349 7.64e-25 105
Msa0174760 AT3G14790.1 27.950 322 195 13 120 422 9 312 8.62e-23 101
Msa0174760 AT3G14790.2 27.950 322 195 13 120 422 12 315 9.49e-23 101
Msa0174760 AT1G53500.1 27.356 329 206 14 120 431 11 323 9.19e-22 98.6
Msa0174760 AT1G78570.1 27.492 331 203 13 120 431 9 321 9.30e-22 98.6
Msa0174760 AT2G45310.1 25.410 366 207 13 117 441 96 436 1.07e-19 91.3
Msa0174760 AT4G00110.1 24.429 438 257 17 20 422 13 411 5.08e-18 86.3
Msa0174760 AT4G30440.1 25.876 371 198 15 98 426 77 412 5.79e-18 86.3
Msa0174760 AT1G02000.1 25.348 359 216 13 115 441 89 427 6.83e-18 85.9
Msa0174760 AT3G23820.1 25.648 347 192 13 117 422 111 432 1.26e-16 82.4
Msa0174760 AT4G12250.1 24.863 366 205 13 117 439 95 433 1.61e-14 75.9
Msa0174760 AT2G28755.1 49.123 57 29 0 342 398 4 60 2.43e-13 65.1
Msa0174760 AT4G23920.1 25.588 340 209 15 120 429 5 330 1.31e-11 66.2
Msa0174760 AT1G73250.1 25.776 322 197 9 116 422 15 309 4.89e-11 64.3

Find 165 sgRNAs with CRISPR-Local

Find 355 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGGAGCCTTTGACAGTTTA+TGG 0.132583 1_4:-60519513 Msa0174760:CDS
CATCTGGGTCGATTGTTTCT+TGG 0.195325 1_4:+60517793 None:intergenic
GAGAACGTTATGCATCATTT+TGG 0.259027 1_4:-60521346 Msa0174760:CDS
CCTGTTTGCCATATTATATC+TGG 0.276091 1_4:-60517236 Msa0174760:three_prime_UTR
TCCATCATCTAAGCACATTC+TGG 0.277067 1_4:+60519685 None:intergenic
CTGTACACTATCTTTGCATC+TGG 0.284479 1_4:+60517777 None:intergenic
AGCCATGGTTTGTTTGGTTT+TGG 0.308012 1_4:+60521751 None:intergenic
TTTCCCTTTCTCACTCTCTA+AGG 0.308944 1_4:+60517553 None:intergenic
CTACAAAACCAGATATAATA+TGG 0.320793 1_4:+60517228 None:intergenic
GCTAGGATCTTTAATACATA+TGG 0.330642 1_4:-60519710 Msa0174760:CDS
ACATACCACCATCAAGAATT+AGG 0.334411 1_4:+60517590 None:intergenic
ATCCTCAGAAGGAGACTTAC+TGG 0.338208 1_4:-60520975 Msa0174760:CDS
TATCATTATTTCTTTATCTC+TGG 0.346020 1_4:-60521188 Msa0174760:intron
ATTCAACTTATTTGTGAAGT+TGG 0.354971 1_4:+60517267 None:intergenic
GGAGGGTCTAATGCGCCTTA+TGG 0.364799 1_4:-60518271 Msa0174760:CDS
GCCGCGGTGGTTCATTCGTC+CGG 0.369904 1_4:-60521514 Msa0174760:CDS
ACAGAGAGCCATGGTTTGTT+TGG 0.370816 1_4:+60521745 None:intergenic
TCCTTAGCATTACTAATATC+AGG 0.371147 1_4:+60517720 None:intergenic
CCATCAACCGATCCACTAGA+TGG 0.373651 1_4:+60521419 None:intergenic
CCCTTGCGCAGGTCCACCTT+GGG 0.374902 1_4:+60517681 None:intergenic
GTATGCTACCTCTACCTTCC+TGG 0.376519 1_4:-60517204 Msa0174760:three_prime_UTR
ACTGGTGGAGCGGGGTTCGT+TGG 0.383783 1_4:-60521445 Msa0174760:CDS
TATCCCTAACGGAATCTTCC+CGG 0.388157 1_4:+60521495 None:intergenic
AGATAAAGAAATAATGATAA+AGG 0.388953 1_4:+60521192 None:intergenic
GCGCAAGGGCCTCCCACTAA+TGG 0.391517 1_4:-60517667 Msa0174760:CDS
AGGAGCCTTTGACAGTTTAT+GGG 0.392286 1_4:-60519512 Msa0174760:CDS
CTGGTGGAGCGGGGTTCGTT+GGG 0.393802 1_4:-60521444 Msa0174760:CDS
TCAAATTATTTACCTAGATT+AGG 0.396832 1_4:-60517170 Msa0174760:three_prime_UTR
ATCGTGGTGACTGGTGGAGC+GGG 0.397599 1_4:-60521454 Msa0174760:CDS
CATCAGATCCACCTTCCTTA+TGG 0.397788 1_4:+60517613 None:intergenic
GGGCTGCGGATCGTGGTGAC+TGG 0.410525 1_4:-60521463 Msa0174760:CDS
TTCCCTCATCGTAGCAGCTT+CGG 0.415039 1_4:+60519962 None:intergenic
CCTCTACCTTCCTGGACACT+CGG 0.426101 1_4:-60517196 Msa0174760:three_prime_UTR
ATCTGATGCCTAATTCTTGA+TGG 0.429722 1_4:-60517598 Msa0174760:exon
AGTTGGAGCAAAATAGAATA+AGG 0.433617 1_4:+60517284 None:intergenic
TATAGATAGAATTATATAGA+TGG 0.433980 1_4:+60517370 None:intergenic
CATAAATGAAAGCCTAATCT+AGG 0.435969 1_4:+60517158 None:intergenic
GCCCTTGCGCAGGTCCACCT+TGG 0.438364 1_4:+60517680 None:intergenic
CCATCTAGTGGATCGGTTGA+TGG 0.441443 1_4:-60521419 Msa0174760:CDS
ATGCTAAGGAGCACCTTGGC+TGG 0.442296 1_4:-60517707 Msa0174760:CDS
TGGGGAAACGTTAATCCAAT+TGG 0.447650 1_4:-60520955 Msa0174760:intron
CCAGATATAATATGGCAAAC+AGG 0.449264 1_4:+60517236 None:intergenic
GTTGTTGATAATTTCTTCAC+TGG 0.449487 1_4:-60521376 Msa0174760:CDS
CGGAAGTCGGAAACCATTAG+TGG 0.450288 1_4:+60517654 None:intergenic
CCATCATCTAAGCACATTCT+GGG 0.451125 1_4:+60519686 None:intergenic
TACGGCTGAGACATTGACTA+TGG 0.452590 1_4:-60519935 Msa0174760:CDS
CAACAAAAGTAACATTTAAG+AGG 0.457596 1_4:+60517465 None:intergenic
CAATCAATCTTCAAAGATTG+AGG 0.457660 1_4:+60517433 None:intergenic
TAATTTCTTCACTGGTAGAA+AGG 0.458747 1_4:-60521368 Msa0174760:CDS
CTGCGGATCGTGGTGACTGG+TGG 0.460556 1_4:-60521460 Msa0174760:CDS
CCGTTCAACCTTGGAAATCC+TGG 0.460579 1_4:-60518231 Msa0174760:CDS
CTCTACCTTCCTGGACACTC+GGG 0.462862 1_4:-60517195 Msa0174760:three_prime_UTR
GATGAAGAAGTTGAAGATGA+AGG 0.465158 1_4:+60521631 None:intergenic
TCGTCCGGGAAGATTCCGTT+AGG 0.467216 1_4:-60521499 Msa0174760:CDS
GGGTTGAACTTGTAATGAAC+AGG 0.472521 1_4:+60521232 None:intergenic
ACAAGTACAAGTGAGGTCTA+TGG 0.474387 1_4:-60521012 Msa0174760:CDS
CCTTTGACAGTTTATGGGGA+TGG 0.479069 1_4:-60519507 Msa0174760:CDS
CTTGGATTGGCGAAAAGAGT+TGG 0.481126 1_4:-60521051 Msa0174760:CDS
TGTACCTTAGAGAGTGAGAA+AGG 0.484526 1_4:-60517557 Msa0174760:three_prime_UTR
GAAATTGATAAATGAAATCA+TGG 0.484544 1_4:+60517396 None:intergenic
CGTTAGTAACTTCGTTGCTC+AGG 0.484924 1_4:-60519657 Msa0174760:intron
CCACCTTGGGTTCCCAGCCA+AGG 0.489999 1_4:+60517694 None:intergenic
CTTTGACAGTTTATGGGGAT+GGG 0.494567 1_4:-60519506 Msa0174760:CDS
CCCTTCCTCTTTATCCCTAA+CGG 0.497420 1_4:+60521484 None:intergenic
GGATAAAGAGGAAGGGGCTG+CGG 0.500833 1_4:-60521477 Msa0174760:CDS
CATGTGGGGCCGTTCAACCT+TGG 0.503780 1_4:-60518240 Msa0174760:CDS
AATGAAATCATGGCTGGCTA+TGG 0.506217 1_4:+60517406 None:intergenic
TACCATGCTTGAACTTGCCA+AGG 0.506479 1_4:-60518202 Msa0174760:intron
TTGATAAATGAAATCATGGC+TGG 0.507655 1_4:+60517400 None:intergenic
CCACATGTTCCCCTTCCATA+AGG 0.508074 1_4:+60518256 None:intergenic
GTGGGAACATTGAACATGCT+TGG 0.509297 1_4:-60521069 Msa0174760:CDS
TGCTAAGGAGCACCTTGGCT+GGG 0.512225 1_4:-60517706 Msa0174760:CDS
GGTCTAATGCGCCTTATGGA+AGG 0.512523 1_4:-60518267 Msa0174760:CDS
CCGCGGTGGTTCATTCGTCC+GGG 0.513229 1_4:-60521513 Msa0174760:CDS
TCCTCAGAAGGAGACTTACT+GGG 0.519434 1_4:-60520974 Msa0174760:CDS
CCAGGATTTCCAAGGTTGAA+CGG 0.522672 1_4:+60518231 None:intergenic
CCCCAGTAAGTCTCCTTCTG+AGG 0.524128 1_4:+60520973 None:intergenic
AACATTGAACATGCTTGGAT+TGG 0.524725 1_4:-60521064 Msa0174760:CDS
TTGGGTCCCATCTAGTGGAT+CGG 0.526167 1_4:-60521426 Msa0174760:CDS
AGTTCAGAATTGACTTTCAG+AGG 0.526556 1_4:-60521808 Msa0174760:CDS
TAAGCAACGCGCTGCCGCGG+TGG 0.526605 1_4:-60521527 Msa0174760:CDS
CCGAGTGTCCAGGAAGGTAG+AGG 0.526772 1_4:+60517196 None:intergenic
TGATCAACTTCAAGAAGAAG+AGG 0.527982 1_4:+60521283 None:intergenic
GTTCGTTGGGTCCCATCTAG+TGG 0.529461 1_4:-60521431 Msa0174760:CDS
TCCTTCTGAGGATGCTGCAG+AGG 0.534418 1_4:+60520985 None:intergenic
TTTCCAATACGTCTCTGACT+TGG 0.538596 1_4:-60519469 Msa0174760:intron
TTGTAATGAACAGGAGAAGC+AGG 0.538705 1_4:+60521241 None:intergenic
GATAGAATTATATAGATGGC+AGG 0.541480 1_4:+60517374 None:intergenic
AATCAATCTTCAAAGATTGA+GGG 0.543476 1_4:+60517434 None:intergenic
GCCTGATATTAGTAATGCTA+AGG 0.543495 1_4:-60517721 Msa0174760:CDS
ACCCAAGGTGGACCTGCGCA+AGG 0.544301 1_4:-60517682 Msa0174760:CDS
CCATCCCCATAAACTGTCAA+AGG 0.544642 1_4:+60519507 None:intergenic
TTACCAAGTCAGAGACGTAT+TGG 0.546881 1_4:+60519466 None:intergenic
GTCTAATGCGCCTTATGGAA+GGG 0.547257 1_4:-60518266 Msa0174760:CDS
CGAGTCTGATTCGTATGGAC+GGG 0.548354 1_4:+60521594 None:intergenic
TACCTTGGCAAGTTCAAGCA+TGG 0.549103 1_4:+60518200 None:intergenic
TGTACACTATCTTTGCATCT+GGG 0.549639 1_4:+60517778 None:intergenic
GCACCTTGGCTGGGAACCCA+AGG 0.550808 1_4:-60517697 Msa0174760:CDS
TCACAGAGGGGCCGGTGTAG+AGG 0.552066 1_4:-60519908 Msa0174760:intron
TTTATGTTGGCACAGGTGGA+GGG 0.552335 1_4:-60518288 Msa0174760:intron
CCTTATGGAAGGGGAACATG+TGG 0.552410 1_4:-60518256 Msa0174760:CDS
ATGGATTATCACAGAGGGGC+CGG 0.554708 1_4:-60519916 Msa0174760:CDS
TTTGGTGACCATAAGGAAGG+TGG 0.556410 1_4:-60517621 Msa0174760:CDS
CCCAGAATGTGCTTAGATGA+TGG 0.557030 1_4:-60519686 Msa0174760:CDS
TCTAATGCGCCTTATGGAAG+GGG 0.557519 1_4:-60518265 Msa0174760:CDS
CTACATGCAGGCGCTGAGGA+AGG 0.558115 1_4:-60519532 Msa0174760:intron
TCCGTTAGGGATAAAGAGGA+AGG 0.560397 1_4:-60521485 Msa0174760:CDS
TCACGAAGCATGTAACGAAT+CGG 0.561879 1_4:+60521715 None:intergenic
TCCTCTGCAGCATCCTCAGA+AGG 0.565302 1_4:-60520986 Msa0174760:CDS
AGATTCCGTTAGGGATAAAG+AGG 0.565904 1_4:-60521489 Msa0174760:CDS
GATCGTGGTGACTGGTGGAG+CGG 0.568659 1_4:-60521455 Msa0174760:CDS
CGTTAGGGATAAAGAGGAAG+GGG 0.570309 1_4:-60521483 Msa0174760:CDS
AATTTGAACCCCGAGTGTCC+AGG 0.571273 1_4:+60517186 None:intergenic
TCTTCAAAGATTGAGGGAGA+AGG 0.575434 1_4:+60517440 None:intergenic
TCAAGCATGGTAAATTCACC+AGG 0.575463 1_4:+60518213 None:intergenic
TTAGTGGGAGGCCCTTGCGC+AGG 0.576261 1_4:+60517670 None:intergenic
GCGCGTTGCTTATACACTGC+CGG 0.578384 1_4:+60521538 None:intergenic
TAAATTCACCAGGATTTCCA+AGG 0.581095 1_4:+60518223 None:intergenic
GAGATCGAGTCTGATTCGTA+TGG 0.586595 1_4:+60521589 None:intergenic
GTATAAGCAACGCGCTGCCG+CGG 0.587453 1_4:-60521530 Msa0174760:CDS
TCTGAGGATAACAAACACTT+AGG 0.587516 1_4:-60517522 Msa0174760:three_prime_UTR
AGGTATGATTGTGAAGAATA+CGG 0.588806 1_4:+60521651 None:intergenic
GGAGCCTTTGACAGTTTATG+GGG 0.589496 1_4:-60519511 Msa0174760:CDS
CGTCCGGGAAGATTCCGTTA+GGG 0.590511 1_4:-60521498 Msa0174760:CDS
GTCCGAAGCTGCTACGATGA+GGG 0.595012 1_4:-60519964 Msa0174760:CDS
CCCAAGGTGGACCTGCGCAA+GGG 0.598380 1_4:-60517681 Msa0174760:CDS
GAGGAAGGGGCTGCGGATCG+TGG 0.599017 1_4:-60521470 Msa0174760:CDS
TTATGGAAGGGGAACATGTG+GGG 0.599343 1_4:-60518254 Msa0174760:CDS
TGGATCGGTTGATGGCGAGA+GGG 0.602798 1_4:-60521411 Msa0174760:CDS
CTTATGGAAGGGGAACATGT+GGG 0.604163 1_4:-60518255 Msa0174760:CDS
TGACTATGGATTATCACAGA+GGG 0.606976 1_4:-60519921 Msa0174760:CDS
GGACGAATTACAGAGAGCCA+TGG 0.607729 1_4:+60521736 None:intergenic
GTACCTTAGAGAGTGAGAAA+GGG 0.610517 1_4:-60517556 Msa0174760:three_prime_UTR
TCGTGGTGACTGGTGGAGCG+GGG 0.612656 1_4:-60521453 Msa0174760:CDS
CCTTGGCTGGGAACCCAAGG+TGG 0.613832 1_4:-60517694 Msa0174760:CDS
CATCAACCGATCCACTAGAT+GGG 0.613973 1_4:+60521420 None:intergenic
TCGAGTCTGATTCGTATGGA+CGG 0.616312 1_4:+60521593 None:intergenic
GTGGATCGGTTGATGGCGAG+AGG 0.617231 1_4:-60521412 Msa0174760:CDS
CCGTTAGGGATAAAGAGGAA+GGG 0.621408 1_4:-60521484 Msa0174760:CDS
GGATCGGTTGATGGCGAGAG+GGG 0.622105 1_4:-60521410 Msa0174760:CDS
CACCAAAACCAAACAAACCA+TGG 0.623979 1_4:-60521753 Msa0174760:CDS
TGTCCGAAGCTGCTACGATG+AGG 0.627996 1_4:-60519965 Msa0174760:CDS
TACCCTACATGCAGGCGCTG+AGG 0.629312 1_4:-60519536 Msa0174760:intron
AGTAATGCTAAGGAGCACCT+TGG 0.629892 1_4:-60517711 Msa0174760:CDS
TGTCGAATAAGCTCAAATCT+CGG 0.633642 1_4:+60521319 None:intergenic
CTACGATGAGGGAAAGCGTA+CGG 0.639259 1_4:-60519953 Msa0174760:CDS
TGATGCCTAATTCTTGATGG+TGG 0.639475 1_4:-60517595 Msa0174760:exon
GTTTACAAGACGAATGTGGT+GGG 0.649160 1_4:-60521087 Msa0174760:intron
GGAAGTCGGAAACCATTAGT+GGG 0.652640 1_4:+60517655 None:intergenic
TTGCTTATACACTGCCGGTG+TGG 0.653879 1_4:+60521543 None:intergenic
CCGGTGTGGTCTTTGACTCG+CGG 0.658452 1_4:+60521557 None:intergenic
CTTGCTAACAAGTACAAGTG+AGG 0.669816 1_4:-60521019 Msa0174760:CDS
TCTACCTTCCTGGACACTCG+GGG 0.670383 1_4:-60517194 Msa0174760:three_prime_UTR
GTTGAAAATGACCTCTACAC+CGG 0.674888 1_4:+60519897 None:intergenic
TGAACCCCGAGTGTCCAGGA+AGG 0.680945 1_4:+60517190 None:intergenic
GATATAATATGGCAAACAGG+AGG 0.688147 1_4:+60517239 None:intergenic
AGTCGGAAACCATTAGTGGG+AGG 0.693475 1_4:+60517658 None:intergenic
TGTTTACAAGACGAATGTGG+TGG 0.706029 1_4:-60521088 Msa0174760:intron
GACTATGGATTATCACAGAG+GGG 0.723185 1_4:-60519920 Msa0174760:CDS
TTGACTATGGATTATCACAG+AGG 0.727119 1_4:-60519922 Msa0174760:CDS
AGTGTACAGAGATAATACAG+AGG 0.727131 1_4:-60517763 Msa0174760:CDS
CCTCAGAAGGAGACTTACTG+GGG 0.731723 1_4:-60520973 Msa0174760:CDS
CCGCGAGTCAAAGACCACAC+CGG 0.734448 1_4:-60521557 Msa0174760:CDS
GAATGTTTACAAGACGAATG+TGG 0.735236 1_4:-60521091 Msa0174760:intron
CCCGGACGAATGAACCACCG+CGG 0.764877 1_4:+60521513 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAGTTTTGTTATTTTAATTT+CGG - chr1_4:60518224-60518243 Msa0174760:CDS 10.0%
!! AAAAAAAAAAAACTACTAAT+TGG - chr1_4:60519148-60519167 Msa0174760:intron 10.0%
!!! ATTTAATATTTGTTTCTAAT+CGG - chr1_4:60519421-60519440 Msa0174760:intron 10.0%
!!! ATTCTATCTATATATTTTTT+TGG - chr1_4:60521621-60521640 Msa0174760:CDS 10.0%
!! AGATAAAGAAATAATGATAA+AGG + chr1_4:60517791-60517810 None:intergenic 15.0%
!! TAATTTAATTGAATTGAAGT+AGG - chr1_4:60518087-60518106 Msa0174760:intron 15.0%
!!! TTAATTTGAATTCTATTTCT+AGG - chr1_4:60518145-60518164 Msa0174760:intron 15.0%
!! ATTGTTAATGATTTCTTAAT+TGG - chr1_4:60519179-60519198 Msa0174760:intron 15.0%
!!! AATTGATTTTGCTAAAAAAT+TGG + chr1_4:60520023-60520042 None:intergenic 15.0%
!!! TTTTTTTCATGTTTGAATTT+TGG - chr1_4:60520221-60520240 Msa0174760:intron 15.0%
!!! AATTTTTTCAATTAAATGTG+CGG + chr1_4:60520305-60520324 None:intergenic 15.0%
!! CATTTAATTGAAAAAATTTC+TGG - chr1_4:60520307-60520326 Msa0174760:intron 15.0%
!! TATAGATAGAATTATATAGA+TGG + chr1_4:60521613-60521632 None:intergenic 15.0%
!!! TATATTTTTTTGGATGTAAT+TGG - chr1_4:60521631-60521650 Msa0174760:CDS 15.0%
!!! ATATTTTTTTGGATGTAATT+GGG - chr1_4:60521632-60521651 Msa0174760:CDS 15.0%
!!! TATCATTATTTCTTTATCTC+TGG - chr1_4:60517792-60517811 Msa0174760:CDS 20.0%
!! TGTAAACATTCATTCAATTA+AGG + chr1_4:60517880-60517899 None:intergenic 20.0%
!!! ATTTTAATTTCGGACTTTTT+TGG - chr1_4:60518234-60518253 Msa0174760:CDS 20.0%
!! TCTAAATATCAACTACTAAT+TGG - chr1_4:60519111-60519130 Msa0174760:intron 20.0%
!!! AATGTTATGTATGTGTTTTT+AGG - chr1_4:60519239-60519258 Msa0174760:intron 20.0%
!! AGAATTAATTTAGAGATGTT+TGG - chr1_4:60519874-60519893 Msa0174760:intron 20.0%
!! GGATAAATTCATATAAGAAT+GGG + chr1_4:60519976-60519995 None:intergenic 20.0%
!! TGGATAAATTCATATAAGAA+TGG + chr1_4:60519977-60519996 None:intergenic 20.0%
!! AATGAAAAATGATTCATGTT+TGG + chr1_4:60519997-60520016 None:intergenic 20.0%
!! ATTGAAATCGCAATAAATTA+AGG + chr1_4:60520133-60520152 None:intergenic 20.0%
!! CGATGATATTTAATTATTCA+CGG + chr1_4:60520579-60520598 None:intergenic 20.0%
!! AACTATTCATTCATAATACT+TGG - chr1_4:60520897-60520916 Msa0174760:intron 20.0%
!!! GAATGAAGAATATTAGTTTT+TGG - chr1_4:60521059-60521078 Msa0174760:CDS 20.0%
!! TTATGATGCATTCAATAATA+GGG + chr1_4:60521142-60521161 None:intergenic 20.0%
!! ATTATGATGCATTCAATAAT+AGG + chr1_4:60521143-60521162 None:intergenic 20.0%
!! GAAATTGATAAATGAAATCA+TGG + chr1_4:60521587-60521606 None:intergenic 20.0%
!! TCAAATTATTTACCTAGATT+AGG - chr1_4:60521810-60521829 Msa0174760:CDS 20.0%
!!! AAAGGATATGATAGTTTTGA+CGG + chr1_4:60517773-60517792 None:intergenic 25.0%
!!! ATGTTTTTTATAGGAAGTGT+TGG + chr1_4:60518497-60518516 None:intergenic 25.0%
! AACACTTCCTATAAAAAACA+TGG - chr1_4:60518496-60518515 Msa0174760:intron 25.0%
!!! ACATCAACCATGTTTTTTAT+AGG + chr1_4:60518506-60518525 None:intergenic 25.0%
!! ATAAAAAACATGGTTGATGT+TGG - chr1_4:60518506-60518525 Msa0174760:intron 25.0%
!! AGTAGTTGATATTTAGAAAG+AGG + chr1_4:60519108-60519127 None:intergenic 25.0%
!! ATGGAAGTACAATAAAAGAA+AGG + chr1_4:60519354-60519373 None:intergenic 25.0%
!!! TTTGTTGTTTGAAATTGGAA+TGG + chr1_4:60519373-60519392 None:intergenic 25.0%
!!! TTGTTTTAGTCTCAAATTCA+TGG - chr1_4:60519945-60519964 Msa0174760:CDS 25.0%
!!! TAATTGTGAGTTTGGTTTTA+TGG + chr1_4:60520067-60520086 None:intergenic 25.0%
! ACATATACTAATTGTGAGTT+TGG + chr1_4:60520075-60520094 None:intergenic 25.0%
! ACTCACAATTAGTATATGTT+AGG - chr1_4:60520076-60520095 Msa0174760:intron 25.0%
! TATTTAATTATTCACGGTCA+CGG + chr1_4:60520573-60520592 None:intergenic 25.0%
! CGTGAATAATTATTTGACTA+TGG - chr1_4:60520597-60520616 Msa0174760:intron 25.0%
!! CATCAATGTGATTTTTATGT+TGG - chr1_4:60520679-60520698 Msa0174760:intron 25.0%
! TTAACTTAGTTGGATTATCA+TGG + chr1_4:60520871-60520890 None:intergenic 25.0%
! AGTTCTTCAATTAACTTAGT+TGG + chr1_4:60520881-60520900 None:intergenic 25.0%
! TAATAAACAATAATGACAGG+AGG + chr1_4:60521012-60521031 None:intergenic 25.0%
! CAGTAATAAACAATAATGAC+AGG + chr1_4:60521015-60521034 None:intergenic 25.0%
! TGTTCATATTCTAATGATGT+GGG - chr1_4:60521033-60521052 Msa0174760:CDS 25.0%
!!! ACTAGTTGTTTATTTTCTGT+CGG - chr1_4:60521082-60521101 Msa0174760:intron 25.0%
! CAACAAAAGTAACATTTAAG+AGG + chr1_4:60521518-60521537 None:intergenic 25.0%
! AATCAATCTTCAAAGATTGA+GGG + chr1_4:60521549-60521568 None:intergenic 25.0%
! ATTCAACTTATTTGTGAAGT+TGG + chr1_4:60521716-60521735 None:intergenic 25.0%
! CTACAAAACCAGATATAATA+TGG + chr1_4:60521755-60521774 None:intergenic 25.0%
AGGTATGATTGTGAAGAATA+CGG + chr1_4:60517332-60517351 None:intergenic 30.0%
!! GTTGTTGATAATTTCTTCAC+TGG - chr1_4:60517604-60517623 Msa0174760:exon 30.0%
TAATTTCTTCACTGGTAGAA+AGG - chr1_4:60517612-60517631 Msa0174760:CDS 30.0%
!!! AAGGATATGATAGTTTTGAC+GGG + chr1_4:60517772-60517791 None:intergenic 30.0%
TTAAGATGTTACTCACCAAT+TGG + chr1_4:60518043-60518062 None:intergenic 30.0%
GAATTGAAGTAGGAGTTAAT+AGG - chr1_4:60518097-60518116 Msa0174760:intron 30.0%
! AGTTAATAGGTGGATTTGTT+TGG - chr1_4:60518110-60518129 Msa0174760:intron 30.0%
GGTATAAACAGCGTTTAATT+TGG - chr1_4:60518166-60518185 Msa0174760:intron 30.0%
CTGAAATTCATACGAAAACA+CGG + chr1_4:60518295-60518314 None:intergenic 30.0%
! GTGTTTTCGTATGAATTTCA+GGG - chr1_4:60518294-60518313 Msa0174760:intron 30.0%
AAATTACCATCTATGATGCA+CGG + chr1_4:60518664-60518683 None:intergenic 30.0%
! TGCATCATAGATGGTAATTT+TGG - chr1_4:60518664-60518683 Msa0174760:intron 30.0%
! GCATCATAGATGGTAATTTT+GGG - chr1_4:60518665-60518684 Msa0174760:intron 30.0%
! CATCATAGATGGTAATTTTG+GGG - chr1_4:60518666-60518685 Msa0174760:intron 30.0%
GATAGACACAAAGTTATCTA+TGG + chr1_4:60518733-60518752 None:intergenic 30.0%
AATAAATTGTTGTGTGAGAC+AGG - chr1_4:60518992-60519011 Msa0174760:intron 30.0%
!!! GTTTTTAGGTTAGAATTGCT+AGG - chr1_4:60519253-60519272 Msa0174760:intron 30.0%
GCTAGGATCTTTAATACATA+TGG - chr1_4:60519270-60519289 Msa0174760:intron 30.0%
AATTTCAAACAACAAAGCCA+CGG - chr1_4:60519377-60519396 Msa0174760:intron 30.0%
!!! CCAGAATAGAGTTTTGTTAA+TGG + chr1_4:60519570-60519589 None:intergenic 30.0%
CCATTAACAAAACTCTATTC+TGG - chr1_4:60519567-60519586 Msa0174760:intron 30.0%
ACTCTATTCTGGACTATATT+TGG - chr1_4:60519578-60519597 Msa0174760:intron 30.0%
TGTTCTAATTCTAACTTAGC+TGG - chr1_4:60519898-60519917 Msa0174760:intron 30.0%
GAAATCGCAATAAATTAAGG+TGG + chr1_4:60520130-60520149 None:intergenic 30.0%
TCTTAATAACTAATGAGCGA+AGG - chr1_4:60520349-60520368 Msa0174760:intron 30.0%
GTAGCAAGAATAAATCAAAG+TGG - chr1_4:60520502-60520521 Msa0174760:intron 30.0%
ATTTAATTATTCACGGTCAC+GGG + chr1_4:60520572-60520591 None:intergenic 30.0%
TTGCCAAGGTAAAGATTATT+AGG - chr1_4:60520792-60520811 Msa0174760:intron 30.0%
CTTCCTAATAATCTTTACCT+TGG + chr1_4:60520798-60520817 None:intergenic 30.0%
CAAGGTAAAGATTATTAGGA+AGG - chr1_4:60520796-60520815 Msa0174760:intron 30.0%
CAAATGATTATGAGCTATTC+TGG + chr1_4:60520825-60520844 None:intergenic 30.0%
TTCATTCATAATACTTGGCA+TGG - chr1_4:60520902-60520921 Msa0174760:intron 30.0%
CTGTTCATATTCTAATGATG+TGG - chr1_4:60521032-60521051 Msa0174760:CDS 30.0%
CATCATAATGTATGTACGTT+TGG - chr1_4:60521154-60521173 Msa0174760:intron 30.0%
TCCTTAGCATTACTAATATC+AGG + chr1_4:60521263-60521282 None:intergenic 30.0%
AAGGGAAAAAATATAGTCTG+AGG - chr1_4:60521442-60521461 Msa0174760:CDS 30.0%
CAATCAATCTTCAAAGATTG+AGG + chr1_4:60521550-60521569 None:intergenic 30.0%
TTGATAAATGAAATCATGGC+TGG + chr1_4:60521583-60521602 None:intergenic 30.0%
GATAGAATTATATAGATGGC+AGG + chr1_4:60521609-60521628 None:intergenic 30.0%
AGTTGGAGCAAAATAGAATA+AGG + chr1_4:60521699-60521718 None:intergenic 30.0%
! AGTTCAGAATTGACTTTCAG+AGG - chr1_4:60517172-60517191 Msa0174760:three_prime_UTR 35.0%
GATGAAGAAGTTGAAGATGA+AGG + chr1_4:60517352-60517371 None:intergenic 35.0%
! GAGAACGTTATGCATCATTT+TGG - chr1_4:60517634-60517653 Msa0174760:CDS 35.0%
TGTCGAATAAGCTCAAATCT+CGG + chr1_4:60517664-60517683 None:intergenic 35.0%
TGATCAACTTCAAGAAGAAG+AGG + chr1_4:60517700-60517719 None:intergenic 35.0%
!!! AGGATATGATAGTTTTGACG+GGG + chr1_4:60517771-60517790 None:intergenic 35.0%
GAATGTTTACAAGACGAATG+TGG - chr1_4:60517889-60517908 Msa0174760:intron 35.0%
AACATTGAACATGCTTGGAT+TGG - chr1_4:60517916-60517935 Msa0174760:intron 35.0%
TTGAAGTAGGAGTTAATAGG+TGG - chr1_4:60518100-60518119 Msa0174760:intron 35.0%
TGGTTAACCAATAAGACAAG+TGG - chr1_4:60518254-60518273 Msa0174760:CDS 35.0%
! CGTGTTTTCGTATGAATTTC+AGG - chr1_4:60518293-60518312 Msa0174760:intron 35.0%
!! TTTTAGGTATCCGTGATTTG+CGG - chr1_4:60518322-60518341 Msa0174760:intron 35.0%
! ATTTTCACGTTTATGCAACG+TGG + chr1_4:60518386-60518405 None:intergenic 35.0%
! CTTTTTACTACAGCACACAA+GGG + chr1_4:60518411-60518430 None:intergenic 35.0%
! ACTTTTTACTACAGCACACA+AGG + chr1_4:60518412-60518431 None:intergenic 35.0%
TAAAAAGTGAACGTGAACGT+AGG - chr1_4:60518424-60518443 Msa0174760:intron 35.0%
!!! GCTACACATTTTAGAACACA+TGG + chr1_4:60518473-60518492 None:intergenic 35.0%
ATATATCCGTGCATCATAGA+TGG - chr1_4:60518655-60518674 Msa0174760:intron 35.0%
!!! TAATTTTGGGGTTTGTGGTT+GGG - chr1_4:60518678-60518697 Msa0174760:intron 35.0%
TCTATGGCACCAAAAAACTA+TGG + chr1_4:60518717-60518736 None:intergenic 35.0%
!!! CCATAGTTTTTTGGTGACAT+TGG + chr1_4:60518826-60518845 None:intergenic 35.0%
CCAATGTCACCAAAAAACTA+TGG - chr1_4:60518823-60518842 Msa0174760:intron 35.0%
ACCACAAACGGAAAATACTT+GGG + chr1_4:60518851-60518870 None:intergenic 35.0%
AACCACAAACGGAAAATACT+TGG + chr1_4:60518852-60518871 None:intergenic 35.0%
! TCCTATTGAGGTGTTCAAAT+TGG - chr1_4:60518905-60518924 Msa0174760:intron 35.0%
! CCTATTGAGGTGTTCAAATT+GGG - chr1_4:60518906-60518925 Msa0174760:intron 35.0%
ATTGGGAAAGTGAAGAAAAG+TGG - chr1_4:60518923-60518942 Msa0174760:intron 35.0%
! TTTTGTCCTTGTCTCTATGT+AGG - chr1_4:60518950-60518969 Msa0174760:intron 35.0%
TAACAACCTACATAGAGACA+AGG + chr1_4:60518959-60518978 None:intergenic 35.0%
TTGTCTCTATGTAGGTTGTT+AGG - chr1_4:60518958-60518977 Msa0174760:intron 35.0%
! TTGACTATGGATTATCACAG+AGG - chr1_4:60519058-60519077 Msa0174760:intron 35.0%
! TGACTATGGATTATCACAGA+GGG - chr1_4:60519059-60519078 Msa0174760:intron 35.0%
!! GTGGCTTTGTTGTTTGAAAT+TGG + chr1_4:60519378-60519397 None:intergenic 35.0%
ATTTCAAACAACAAAGCCAC+GGG - chr1_4:60519378-60519397 Msa0174760:intron 35.0%
ACACCATAGATATTGCAAAG+CGG - chr1_4:60519793-60519812 Msa0174760:intron 35.0%
TTGCTATCACAATTCACAGT+AGG + chr1_4:60519838-60519857 None:intergenic 35.0%
! AATTTCTGGACTTCTGTTGA+TGG - chr1_4:60520321-60520340 Msa0174760:intron 35.0%
CAAACTGCAATTATATGAGC+TGG + chr1_4:60520470-60520489 None:intergenic 35.0%
GAGAAAGATTCCAAATCCAA+AGG + chr1_4:60520651-60520670 None:intergenic 35.0%
! TGTGATTTTTATGTTGGCAC+AGG - chr1_4:60520685-60520704 Msa0174760:intron 35.0%
TAAATTCACCAGGATTTCCA+AGG + chr1_4:60520760-60520779 None:intergenic 35.0%
!!! AGTTAGCTGGACCAATTTTT+TGG - chr1_4:60520972-60520991 Msa0174760:CDS 35.0%
CAGTGAAGCAACCAAAAAAT+TGG + chr1_4:60520986-60521005 None:intergenic 35.0%
!! AGTTGTTTATTTTCTGTCGG+TGG - chr1_4:60521085-60521104 Msa0174760:intron 35.0%
!! AATGTATGTACGTTTGGTGT+AGG - chr1_4:60521160-60521179 Msa0174760:intron 35.0%
TGTACACTATCTTTGCATCT+GGG + chr1_4:60521205-60521224 None:intergenic 35.0%
AGTGTACAGAGATAATACAG+AGG - chr1_4:60521217-60521236 Msa0174760:CDS 35.0%
! TATCAGGCTTTCTTTTGTGT+GGG + chr1_4:60521247-60521266 None:intergenic 35.0%
! ATATCAGGCTTTCTTTTGTG+TGG + chr1_4:60521248-60521267 None:intergenic 35.0%
GCCTGATATTAGTAATGCTA+AGG - chr1_4:60521259-60521278 Msa0174760:CDS 35.0%
!!! ATTTTTGGTGACCATAAGGA+AGG - chr1_4:60521356-60521375 Msa0174760:CDS 35.0%
ATCTGATGCCTAATTCTTGA+TGG - chr1_4:60521382-60521401 Msa0174760:CDS 35.0%
ACATACCACCATCAAGAATT+AGG + chr1_4:60521393-60521412 None:intergenic 35.0%
TCTGAGGATAACAAACACTT+AGG - chr1_4:60521458-60521477 Msa0174760:CDS 35.0%
GATATAATATGGCAAACAGG+AGG + chr1_4:60521744-60521763 None:intergenic 35.0%
CCAGATATAATATGGCAAAC+AGG + chr1_4:60521747-60521766 None:intergenic 35.0%
CCTGTTTGCCATATTATATC+TGG - chr1_4:60521744-60521763 Msa0174760:CDS 35.0%
CACCAAAACCAAACAAACCA+TGG - chr1_4:60517227-60517246 Msa0174760:three_prime_UTR 40.0%
!!! AGCCATGGTTTGTTTGGTTT+TGG + chr1_4:60517232-60517251 None:intergenic 40.0%
TCACGAAGCATGTAACGAAT+CGG + chr1_4:60517268-60517287 None:intergenic 40.0%
AGATTCCGTTAGGGATAAAG+AGG - chr1_4:60517491-60517510 Msa0174760:three_prime_UTR 40.0%
TTGTAATGAACAGGAGAAGC+AGG + chr1_4:60517742-60517761 None:intergenic 40.0%
GGGTTGAACTTGTAATGAAC+AGG + chr1_4:60517751-60517770 None:intergenic 40.0%
TGTTTACAAGACGAATGTGG+TGG - chr1_4:60517892-60517911 Msa0174760:intron 40.0%
GTTTACAAGACGAATGTGGT+GGG - chr1_4:60517893-60517912 Msa0174760:intron 40.0%
CTTGCTAACAAGTACAAGTG+AGG - chr1_4:60517961-60517980 Msa0174760:intron 40.0%
ACAAGTACAAGTGAGGTCTA+TGG - chr1_4:60517968-60517987 Msa0174760:intron 40.0%
TGGGGAAACGTTAATCCAAT+TGG - chr1_4:60518025-60518044 Msa0174760:intron 40.0%
AGAAATCACACAGAACATGC+AGG + chr1_4:60518195-60518214 None:intergenic 40.0%
!!! GAATTTCAGGGTGTCGTTTT+AGG - chr1_4:60518306-60518325 Msa0174760:intron 40.0%
! TTTAGGTATCCGTGATTTGC+GGG - chr1_4:60518323-60518342 Msa0174760:intron 40.0%
! TATCTGAGCCGTTGATTAAG+TGG + chr1_4:60518350-60518369 None:intergenic 40.0%
TAGATCATATGTCGTGTCGA+CGG + chr1_4:60518551-60518570 None:intergenic 40.0%
!!! GATGGTAATTTTGGGGTTTG+TGG - chr1_4:60518673-60518692 Msa0174760:intron 40.0%
!!! GTAATTTTGGGGTTTGTGGT+TGG - chr1_4:60518677-60518696 Msa0174760:intron 40.0%
!!! ACTTGGGTGCCATAGTTTTT+TGG - chr1_4:60518705-60518724 Msa0174760:intron 40.0%
!!! ACTTGGGTGCCATAGTTTTT+TGG + chr1_4:60518705-60518724 None:intergenic 40.0%
! ACCCAAGTATTTTCCGTTTG+TGG - chr1_4:60518847-60518866 Msa0174760:intron 40.0%
TTTCCGTTTGTGGTTACAGA+AGG - chr1_4:60518857-60518876 Msa0174760:intron 40.0%
CAACCTTCTGTAACCACAAA+CGG + chr1_4:60518863-60518882 None:intergenic 40.0%
TTGTGGTTACAGAAGGTTGA+AGG - chr1_4:60518864-60518883 Msa0174760:intron 40.0%
TTACAGAAGGTTGAAGGAGA+GGG - chr1_4:60518870-60518889 Msa0174760:intron 40.0%
CCCAATTTGAACACCTCAAT+AGG + chr1_4:60518909-60518928 None:intergenic 40.0%
GTAGGTTGTTAGGTACACTT+TGG - chr1_4:60518968-60518987 Msa0174760:intron 40.0%
! GACTATGGATTATCACAGAG+GGG - chr1_4:60519060-60519079 Msa0174760:intron 40.0%
GTTGAAAATGACCTCTACAC+CGG + chr1_4:60519086-60519105 None:intergenic 40.0%
CCATCATCTAAGCACATTCT+GGG + chr1_4:60519297-60519316 None:intergenic 40.0%
TCCATCATCTAAGCACATTC+TGG + chr1_4:60519298-60519317 None:intergenic 40.0%
AAGGAGCCTTTGACAGTTTA+TGG - chr1_4:60519467-60519486 Msa0174760:intron 40.0%
AGGAGCCTTTGACAGTTTAT+GGG - chr1_4:60519468-60519487 Msa0174760:intron 40.0%
CTTTGACAGTTTATGGGGAT+GGG - chr1_4:60519474-60519493 Msa0174760:CDS 40.0%
TTTCCAATACGTCTCTGACT+TGG - chr1_4:60519511-60519530 Msa0174760:CDS 40.0%
TTACCAAGTCAGAGACGTAT+TGG + chr1_4:60519517-60519536 None:intergenic 40.0%
CGCGTATTTGATATCATGAG+AGG - chr1_4:60519633-60519652 Msa0174760:intron 40.0%
!! GTACGATGCTTTTTACGTTG+AGG - chr1_4:60520251-60520270 Msa0174760:intron 40.0%
TGAAATGTACCAATGCGCAA+TGG + chr1_4:60520400-60520419 None:intergenic 40.0%
AGATTCCAAATCCAAAGGCA+TGG + chr1_4:60520646-60520665 None:intergenic 40.0%
! GATTTTTATGTTGGCACAGG+TGG - chr1_4:60520688-60520707 Msa0174760:intron 40.0%
TCAAGCATGGTAAATTCACC+AGG + chr1_4:60520770-60520789 None:intergenic 40.0%
TCCTTAAAACCAGAGTTAGC+TGG - chr1_4:60520959-60520978 Msa0174760:CDS 40.0%
!!! TCCAGCTAACTCTGGTTTTA+AGG + chr1_4:60520963-60520982 None:intergenic 40.0%
AAAATTGGTCCAGCTAACTC+TGG + chr1_4:60520971-60520990 None:intergenic 40.0%
CTGTACACTATCTTTGCATC+TGG + chr1_4:60521206-60521225 None:intergenic 40.0%
AAAAATGCGTTGTCGGAAGT+CGG + chr1_4:60521342-60521361 None:intergenic 40.0%
!!! ACGCATTTTTGGTGACCATA+AGG - chr1_4:60521352-60521371 Msa0174760:CDS 40.0%
TGATGCCTAATTCTTGATGG+TGG - chr1_4:60521385-60521404 Msa0174760:CDS 40.0%
TGTACCTTAGAGAGTGAGAA+AGG - chr1_4:60521423-60521442 Msa0174760:CDS 40.0%
GTACCTTAGAGAGTGAGAAA+GGG - chr1_4:60521424-60521443 Msa0174760:CDS 40.0%
TTTCCCTTTCTCACTCTCTA+AGG + chr1_4:60521430-60521449 None:intergenic 40.0%
TCTTCAAAGATTGAGGGAGA+AGG + chr1_4:60521543-60521562 None:intergenic 40.0%
! AATGAAATCATGGCTGGCTA+TGG + chr1_4:60521577-60521596 None:intergenic 40.0%
!! ACAGAGAGCCATGGTTTGTT+TGG + chr1_4:60517238-60517257 None:intergenic 45.0%
! CGACTCGTTTTCGTCTTGAT+CGG - chr1_4:60517292-60517311 Msa0174760:three_prime_UTR 45.0%
! TCGAGTCTGATTCGTATGGA+CGG + chr1_4:60517390-60517409 None:intergenic 45.0%
! GAGATCGAGTCTGATTCGTA+TGG + chr1_4:60517394-60517413 None:intergenic 45.0%
TATCCCTAACGGAATCTTCC+CGG + chr1_4:60517488-60517507 None:intergenic 45.0%
TCCGTTAGGGATAAAGAGGA+AGG - chr1_4:60517495-60517514 Msa0174760:three_prime_UTR 45.0%
CCCTTCCTCTTTATCCCTAA+CGG + chr1_4:60517499-60517518 None:intergenic 45.0%
CCGTTAGGGATAAAGAGGAA+GGG - chr1_4:60517496-60517515 Msa0174760:three_prime_UTR 45.0%
CGTTAGGGATAAAGAGGAAG+GGG - chr1_4:60517497-60517516 Msa0174760:three_prime_UTR 45.0%
CATCAACCGATCCACTAGAT+GGG + chr1_4:60517563-60517582 None:intergenic 45.0%
GTGGGAACATTGAACATGCT+TGG - chr1_4:60517911-60517930 Msa0174760:intron 45.0%
!! CTTGGATTGGCGAAAAGAGT+TGG - chr1_4:60517929-60517948 Msa0174760:intron 45.0%
ATCCTCAGAAGGAGACTTAC+TGG - chr1_4:60518005-60518024 Msa0174760:intron 45.0%
TCCTCAGAAGGAGACTTACT+GGG - chr1_4:60518006-60518025 Msa0174760:intron 45.0%
CCACGTTCCACTTGTCTTAT+TGG + chr1_4:60518264-60518283 None:intergenic 45.0%
CCAATAAGACAAGTGGAACG+TGG - chr1_4:60518261-60518280 Msa0174760:CDS 45.0%
TTAAGTGGACCCGCAAATCA+CGG + chr1_4:60518335-60518354 None:intergenic 45.0%
TTGCGGGTCCACTTAATCAA+CGG - chr1_4:60518339-60518358 Msa0174760:intron 45.0%
! AACGTGAACGTAGGTTGAGA+TGG - chr1_4:60518433-60518452 Msa0174760:intron 45.0%
!! TGTTGGCTTGTGTCAGTGTA+TGG - chr1_4:60518523-60518542 Msa0174760:intron 45.0%
GTTACAGAAGGTTGAAGGAG+AGG - chr1_4:60518869-60518888 Msa0174760:intron 45.0%
AGGGCAATTTGGTCCTATTG+AGG - chr1_4:60518893-60518912 Msa0174760:intron 45.0%
! TACGGCTGAGACATTGACTA+TGG - chr1_4:60519045-60519064 Msa0174760:intron 45.0%
CCCAGAATGTGCTTAGATGA+TGG - chr1_4:60519294-60519313 Msa0174760:intron 45.0%
CGTTAGTAACTTCGTTGCTC+AGG - chr1_4:60519323-60519342 Msa0174760:intron 45.0%
GGAGCCTTTGACAGTTTATG+GGG - chr1_4:60519469-60519488 Msa0174760:intron 45.0%
CCATCCCCATAAACTGTCAA+AGG + chr1_4:60519476-60519495 None:intergenic 45.0%
CCTTTGACAGTTTATGGGGA+TGG - chr1_4:60519473-60519492 Msa0174760:CDS 45.0%
! GAGCCGCTTTGCAATATCTA+TGG + chr1_4:60519799-60519818 None:intergenic 45.0%
CTAATGAGCGAAGGTTGTGT+TGG - chr1_4:60520358-60520377 Msa0174760:intron 45.0%
ATGATGTGTCCATTGCGCAT+TGG - chr1_4:60520388-60520407 Msa0174760:intron 45.0%
AAGAACCATTTGCACGTGAC+TGG - chr1_4:60520423-60520442 Msa0174760:intron 45.0%
ATTATATGAGCTGGTCCACC+CGG + chr1_4:60520461-60520480 None:intergenic 45.0%
CTATCCCCATCTTATACACG+AGG + chr1_4:60520531-60520550 None:intergenic 45.0%
TTTGATTGCTGCCATGCCTT+TGG - chr1_4:60520632-60520651 Msa0174760:intron 45.0%
! TTTTATGTTGGCACAGGTGG+AGG - chr1_4:60520691-60520710 Msa0174760:intron 45.0%
TTTATGTTGGCACAGGTGGA+GGG - chr1_4:60520692-60520711 Msa0174760:intron 45.0%
GTCTAATGCGCCTTATGGAA+GGG - chr1_4:60520714-60520733 Msa0174760:intron 45.0%
TCTAATGCGCCTTATGGAAG+GGG - chr1_4:60520715-60520734 Msa0174760:intron 45.0%
CTTATGGAAGGGGAACATGT+GGG - chr1_4:60520725-60520744 Msa0174760:intron 45.0%
TTATGGAAGGGGAACATGTG+GGG - chr1_4:60520726-60520745 Msa0174760:intron 45.0%
CCAGGATTTCCAAGGTTGAA+CGG + chr1_4:60520752-60520771 None:intergenic 45.0%
TACCATGCTTGAACTTGCCA+AGG - chr1_4:60520778-60520797 Msa0174760:intron 45.0%
TACCTTGGCAAGTTCAAGCA+TGG + chr1_4:60520783-60520802 None:intergenic 45.0%
!! GTATGTACGTTTGGTGTAGG+TGG - chr1_4:60521163-60521182 Msa0174760:intron 45.0%
! CATCTGGGTCGATTGTTTCT+TGG + chr1_4:60521190-60521209 None:intergenic 45.0%
!! AGTAATGCTAAGGAGCACCT+TGG - chr1_4:60521269-60521288 Msa0174760:CDS 45.0%
GGAAGTCGGAAACCATTAGT+GGG + chr1_4:60521328-60521347 None:intergenic 45.0%
! GACTTCCGACAACGCATTTT+TGG - chr1_4:60521341-60521360 Msa0174760:CDS 45.0%
GGTCACCAAAAATGCGTTGT+CGG + chr1_4:60521349-60521368 None:intergenic 45.0%
! TTTGGTGACCATAAGGAAGG+TGG - chr1_4:60521359-60521378 Msa0174760:CDS 45.0%
CATCAGATCCACCTTCCTTA+TGG + chr1_4:60521370-60521389 None:intergenic 45.0%
GGACGAATTACAGAGAGCCA+TGG + chr1_4:60517247-60517266 None:intergenic 50.0%
! CGAGTCTGATTCGTATGGAC+GGG + chr1_4:60517389-60517408 None:intergenic 50.0%
TTGCTTATACACTGCCGGTG+TGG + chr1_4:60517440-60517459 None:intergenic 50.0%
! TTGGGTCCCATCTAGTGGAT+CGG - chr1_4:60517554-60517573 Msa0174760:three_prime_UTR 50.0%
CCATCAACCGATCCACTAGA+TGG + chr1_4:60517564-60517583 None:intergenic 50.0%
! CCATCTAGTGGATCGGTTGA+TGG - chr1_4:60517561-60517580 Msa0174760:three_prime_UTR 50.0%
CCTCAGAAGGAGACTTACTG+GGG - chr1_4:60518007-60518026 Msa0174760:intron 50.0%
ACGGCTCAGATAGTTGCTGT+TGG - chr1_4:60518358-60518377 Msa0174760:intron 50.0%
! CGGCTCAGATAGTTGCTGTT+GGG - chr1_4:60518359-60518378 Msa0174760:intron 50.0%
! GTGAACGTAGGTTGAGATGG+TGG - chr1_4:60518436-60518455 Msa0174760:intron 50.0%
! AACGTAGGTTGAGATGGTGG+TGG - chr1_4:60518439-60518458 Msa0174760:intron 50.0%
!!! TTTTGGGGTTTGTGGTTGGG+TGG - chr1_4:60518681-60518700 Msa0174760:intron 50.0%
TTTGTGGTTGGGTGGCACTT+GGG - chr1_4:60518689-60518708 Msa0174760:intron 50.0%
AGAAGGTTGAAGGAGAGGGA+GGG - chr1_4:60518874-60518893 Msa0174760:intron 50.0%
TTCCCTCATCGTAGCAGCTT+CGG + chr1_4:60519021-60519040 None:intergenic 50.0%
! CTACGATGAGGGAAAGCGTA+CGG - chr1_4:60519027-60519046 Msa0174760:intron 50.0%
! ATGGATTATCACAGAGGGGC+CGG - chr1_4:60519064-60519083 Msa0174760:intron 50.0%
! AAGCCACGGGTTGTTGTTGT+TGG - chr1_4:60519391-60519410 Msa0174760:intron 50.0%
ATGCCAACAACAACAACCCG+TGG + chr1_4:60519397-60519416 None:intergenic 50.0%
CTAATCGGTACCCTACATGC+AGG - chr1_4:60519436-60519455 Msa0174760:intron 50.0%
AAAGCGGCTCGCTGTGAATT+TGG - chr1_4:60519809-60519828 Msa0174760:intron 50.0%
AAATGTGCGGCATGCACATG+CGG + chr1_4:60520292-60520311 None:intergenic 50.0%
AGCTTCCAGTCACGTGCAAA+TGG + chr1_4:60520431-60520450 None:intergenic 50.0%
!! TGACTGGAAGCTTGTTAGCC+CGG - chr1_4:60520439-60520458 Msa0174760:intron 50.0%
TTATATGAGCTGGTCCACCC+GGG + chr1_4:60520460-60520479 None:intergenic 50.0%
TCCCCATCTTATACACGAGG+CGG + chr1_4:60520528-60520547 None:intergenic 50.0%
TGCTGCCATGCCTTTGGATT+TGG - chr1_4:60520638-60520657 Msa0174760:intron 50.0%
GGTCTAATGCGCCTTATGGA+AGG - chr1_4:60520713-60520732 Msa0174760:intron 50.0%
CCACATGTTCCCCTTCCATA+AGG + chr1_4:60520727-60520746 None:intergenic 50.0%
CCTTATGGAAGGGGAACATG+TGG - chr1_4:60520724-60520743 Msa0174760:intron 50.0%
CCGTTCAACCTTGGAAATCC+TGG - chr1_4:60520749-60520768 Msa0174760:intron 50.0%
AGTCGGAAACCATTAGTGGG+AGG + chr1_4:60521325-60521344 None:intergenic 50.0%
CGGAAGTCGGAAACCATTAG+TGG + chr1_4:60521329-60521348 None:intergenic 50.0%
GTATGCTACCTCTACCTTCC+TGG - chr1_4:60521776-60521795 Msa0174760:CDS 50.0%
AATTTGAACCCCGAGTGTCC+AGG + chr1_4:60521797-60521816 None:intergenic 50.0%
GCGCGTTGCTTATACACTGC+CGG + chr1_4:60517445-60517464 None:intergenic 55.0%
TCGTCCGGGAAGATTCCGTT+AGG - chr1_4:60517481-60517500 Msa0174760:three_prime_UTR 55.0%
CGTCCGGGAAGATTCCGTTA+GGG - chr1_4:60517482-60517501 Msa0174760:three_prime_UTR 55.0%
GGATAAAGAGGAAGGGGCTG+CGG - chr1_4:60517503-60517522 Msa0174760:three_prime_UTR 55.0%
GTTCGTTGGGTCCCATCTAG+TGG - chr1_4:60517549-60517568 Msa0174760:three_prime_UTR 55.0%
!! TGGATCGGTTGATGGCGAGA+GGG - chr1_4:60517569-60517588 Msa0174760:three_prime_UTR 55.0%
TCCTCTGCAGCATCCTCAGA+AGG - chr1_4:60517994-60518013 Msa0174760:intron 55.0%
! TCCTTCTGAGGATGCTGCAG+AGG + chr1_4:60517998-60518017 None:intergenic 55.0%
CCCCAGTAAGTCTCCTTCTG+AGG + chr1_4:60518010-60518029 None:intergenic 55.0%
GACAAGTGGAACGTGGCAAG+AGG - chr1_4:60518268-60518287 Msa0174760:CDS 55.0%
GTTTGTGGTTGGGTGGCACT+TGG - chr1_4:60518688-60518707 Msa0174760:intron 55.0%
CAGAAGGTTGAAGGAGAGGG+AGG - chr1_4:60518873-60518892 Msa0174760:intron 55.0%
GAAGGAGAGGGAGGGCAATT+TGG - chr1_4:60518882-60518901 Msa0174760:intron 55.0%
TGTCCGAAGCTGCTACGATG+AGG - chr1_4:60519015-60519034 Msa0174760:intron 55.0%
GTCCGAAGCTGCTACGATGA+GGG - chr1_4:60519016-60519035 Msa0174760:intron 55.0%
TTCCTCAGCGCCTGCATGTA+GGG + chr1_4:60519449-60519468 None:intergenic 55.0%
!! GACTGGAAGCTTGTTAGCCC+GGG - chr1_4:60520440-60520459 Msa0174760:intron 55.0%
TGGCCGCCTCGTGTATAAGA+TGG - chr1_4:60520522-60520541 Msa0174760:intron 55.0%
GGCCGCCTCGTGTATAAGAT+GGG - chr1_4:60520523-60520542 Msa0174760:intron 55.0%
GCCGCCTCGTGTATAAGATG+GGG - chr1_4:60520524-60520543 Msa0174760:intron 55.0%
GGAGGGTCTAATGCGCCTTA+TGG - chr1_4:60520709-60520728 Msa0174760:intron 55.0%
!! ATGCTAAGGAGCACCTTGGC+TGG - chr1_4:60521273-60521292 Msa0174760:CDS 55.0%
!! TGCTAAGGAGCACCTTGGCT+GGG - chr1_4:60521274-60521293 Msa0174760:CDS 55.0%
CCTCTACCTTCCTGGACACT+CGG - chr1_4:60521784-60521803 Msa0174760:CDS 55.0%
CTCTACCTTCCTGGACACTC+GGG - chr1_4:60521785-60521804 Msa0174760:CDS 55.0%
TCTACCTTCCTGGACACTCG+GGG - chr1_4:60521786-60521805 Msa0174760:CDS 55.0%
! CCGGTGTGGTCTTTGACTCG+CGG + chr1_4:60517426-60517445 None:intergenic 60.0%
CCGCGAGTCAAAGACCACAC+CGG - chr1_4:60517423-60517442 Msa0174760:three_prime_UTR 60.0%
GTATAAGCAACGCGCTGCCG+CGG - chr1_4:60517450-60517469 Msa0174760:three_prime_UTR 60.0%
GATCGTGGTGACTGGTGGAG+CGG - chr1_4:60517525-60517544 Msa0174760:three_prime_UTR 60.0%
ATCGTGGTGACTGGTGGAGC+GGG - chr1_4:60517526-60517545 Msa0174760:three_prime_UTR 60.0%
!! GTGGATCGGTTGATGGCGAG+AGG - chr1_4:60517568-60517587 Msa0174760:three_prime_UTR 60.0%
!! GGATCGGTTGATGGCGAGAG+GGG - chr1_4:60517570-60517589 Msa0174760:three_prime_UTR 60.0%
! TACCCTACATGCAGGCGCTG+AGG - chr1_4:60519444-60519463 Msa0174760:intron 60.0%
CTTCCTCAGCGCCTGCATGT+AGG + chr1_4:60519450-60519469 None:intergenic 60.0%
!! CTACATGCAGGCGCTGAGGA+AGG - chr1_4:60519448-60519467 Msa0174760:intron 60.0%
!! TGGAAGCTTGTTAGCCCGGG+TGG - chr1_4:60520443-60520462 Msa0174760:intron 60.0%
CATGTGGGGCCGTTCAACCT+TGG - chr1_4:60520740-60520759 Msa0174760:intron 60.0%
CCGAGTGTCCAGGAAGGTAG+AGG + chr1_4:60521787-60521806 None:intergenic 60.0%
TGAACCCCGAGTGTCCAGGA+AGG + chr1_4:60521793-60521812 None:intergenic 60.0%
GCCGCGGTGGTTCATTCGTC+CGG - chr1_4:60517466-60517485 Msa0174760:three_prime_UTR 65.0%
CCCGGACGAATGAACCACCG+CGG + chr1_4:60517470-60517489 None:intergenic 65.0%
CCGCGGTGGTTCATTCGTCC+GGG - chr1_4:60517467-60517486 Msa0174760:three_prime_UTR 65.0%
CTGCGGATCGTGGTGACTGG+TGG - chr1_4:60517520-60517539 Msa0174760:three_prime_UTR 65.0%
TCGTGGTGACTGGTGGAGCG+GGG - chr1_4:60517527-60517546 Msa0174760:three_prime_UTR 65.0%
ACTGGTGGAGCGGGGTTCGT+TGG - chr1_4:60517535-60517554 Msa0174760:three_prime_UTR 65.0%
CTGGTGGAGCGGGGTTCGTT+GGG - chr1_4:60517536-60517555 Msa0174760:three_prime_UTR 65.0%
TCACAGAGGGGCCGGTGTAG+AGG - chr1_4:60519072-60519091 Msa0174760:intron 65.0%
GCACCTTGGCTGGGAACCCA+AGG - chr1_4:60521283-60521302 Msa0174760:CDS 65.0%
CCACCTTGGGTTCCCAGCCA+AGG + chr1_4:60521289-60521308 None:intergenic 65.0%
CCTTGGCTGGGAACCCAAGG+TGG - chr1_4:60521286-60521305 Msa0174760:CDS 65.0%
ACCCAAGGTGGACCTGCGCA+AGG - chr1_4:60521298-60521317 Msa0174760:CDS 65.0%
CCCTTGCGCAGGTCCACCTT+GGG + chr1_4:60521302-60521321 None:intergenic 65.0%
CCCAAGGTGGACCTGCGCAA+GGG - chr1_4:60521299-60521318 Msa0174760:CDS 65.0%
TTAGTGGGAGGCCCTTGCGC+AGG + chr1_4:60521313-60521332 None:intergenic 65.0%
GCGCAAGGGCCTCCCACTAA+TGG - chr1_4:60521313-60521332 Msa0174760:CDS 65.0%
TAAGCAACGCGCTGCCGCGG+TGG - chr1_4:60517453-60517472 Msa0174760:three_prime_UTR 70.0%
GAGGAAGGGGCTGCGGATCG+TGG - chr1_4:60517510-60517529 Msa0174760:three_prime_UTR 70.0%
GGGCTGCGGATCGTGGTGAC+TGG - chr1_4:60517517-60517536 Msa0174760:three_prime_UTR 70.0%
GCCCTTGCGCAGGTCCACCT+TGG + chr1_4:60521303-60521322 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 60517169 60521833 60517169 ID=Msa0174760;Name=Msa0174760
chr1_4 mRNA 60517169 60521833 60517169 ID=Msa0174760-mRNA-1;Parent=Msa0174760;Name=Msa0174760-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.83|0.71|1|1|1|7|439|444
chr1_4 exon 60517169 60517820 60517169 ID=Msa0174760-mRNA-1:exon:19207;Parent=Msa0174760-mRNA-1
chr1_4 exon 60518203 60518295 60518203 ID=Msa0174760-mRNA-1:exon:19206;Parent=Msa0174760-mRNA-1
chr1_4 exon 60519470 60519544 60519470 ID=Msa0174760-mRNA-1:exon:19205;Parent=Msa0174760-mRNA-1
chr1_4 exon 60519658 60519741 60519658 ID=Msa0174760-mRNA-1:exon:19204;Parent=Msa0174760-mRNA-1
chr1_4 exon 60519909 60519988 60519909 ID=Msa0174760-mRNA-1:exon:19203;Parent=Msa0174760-mRNA-1
chr1_4 exon 60520956 60521100 60520956 ID=Msa0174760-mRNA-1:exon:19202;Parent=Msa0174760-mRNA-1
chr1_4 exon 60521189 60521833 60521189 ID=Msa0174760-mRNA-1:exon:19201;Parent=Msa0174760-mRNA-1
chr1_4 CDS 60521189 60521833 60521189 ID=Msa0174760-mRNA-1:cds;Parent=Msa0174760-mRNA-1
chr1_4 CDS 60520956 60521100 60520956 ID=Msa0174760-mRNA-1:cds;Parent=Msa0174760-mRNA-1
chr1_4 CDS 60519909 60519988 60519909 ID=Msa0174760-mRNA-1:cds;Parent=Msa0174760-mRNA-1
chr1_4 CDS 60519658 60519741 60519658 ID=Msa0174760-mRNA-1:cds;Parent=Msa0174760-mRNA-1
chr1_4 CDS 60519470 60519544 60519470 ID=Msa0174760-mRNA-1:cds;Parent=Msa0174760-mRNA-1
chr1_4 CDS 60518203 60518295 60518203 ID=Msa0174760-mRNA-1:cds;Parent=Msa0174760-mRNA-1
chr1_4 CDS 60517608 60517820 60517608 ID=Msa0174760-mRNA-1:cds;Parent=Msa0174760-mRNA-1
chr1_4 three_prime_UTR 60517169 60517607 60517169 ID=Msa0174760-mRNA-1:three_prime_utr;Parent=Msa0174760-mRNA-1
Gene Sequence

>Msa0174760

ATGAGTTCAGAATTGACTTTCAGAGGACACGAAACTCAGCAAGTCAACGATGAATACTCACCAAAACCAAACAAACCATGGCTCTCTGTAATTCGTCCGATTCGTTACATGCTTCGTGAACAACGACTCGTTTTCGTCTTGATCGGAATCGTCATCGCATCCGTATTCTTCACAATCATACCTTCATCTTCAACTTCTTCATCTTCATCATTCTCAACCCGTCCATACGAATCAGACTCGATCTCTTACTTCGACCGCGAGTCAAAGACCACACCGGCAGTGTATAAGCAACGCGCTGCCGCGGTGGTTCATTCGTCCGGGAAGATTCCGTTAGGGATAAAGAGGAAGGGGCTGCGGATCGTGGTGACTGGTGGAGCGGGGTTCGTTGGGTCCCATCTAGTGGATCGGTTGATGGCGAGAGGGGACAGTGTGATTGTTGTTGATAATTTCTTCACTGGTAGAAAGGAGAACGTTATGCATCATTTTGGTAATCCGAGATTTGAGCTTATTCGACACGACGTCGTTGAGCCTCTTCTTCTTGAAGTTGATCAGATCTATCATCTTGCTTGTCCTGCTTCTCCTGTTCATTACAAGTTCAACCCCGTCAAAACTATCATATCCTTTATCATTATTTCTTTATCTCTGACGAATGTGGTGGGAACATTGAACATGCTTGGATTGGCGAAAAGAGTTGGAGCTAGATTCTTGCTAACAAGTACAAGTGAGGTCTATGGTGATCCTCTGCAGCATCCTCAGAAGGAGACTTACTGGGGAAACGTTAATCCAATTGGTGTCCGAAGCTGCTACGATGAGGGAAAGCGTACGGCTGAGACATTGACTATGGATTATCACAGAGGGGCCGGTGTAGAGGTTAGAATTGCTAGGATCTTTAATACATATGGACCCAGAATGTGCTTAGATGATGGACGTGTCGTTAGTAACTTCGTTGCTCAGGCGCTGAGGAAGGAGCCTTTGACAGTTTATGGGGATGGGAAGCAGACTAGAAGTTTCCAATACGTCTCTGACTTGGTGGAGGGTCTAATGCGCCTTATGGAAGGGGAACATGTGGGGCCGTTCAACCTTGGAAATCCTGGTGAATTTACCATGCTTGAACTTGCCAAGGTGGTCCAAGAAACAATCGACCCAGATGCAAAGATAGTGTACAGAGATAATACAGAGGATGACCCACACAAAAGAAAGCCTGATATTAGTAATGCTAAGGAGCACCTTGGCTGGGAACCCAAGGTGGACCTGCGCAAGGGCCTCCCACTAATGGTTTCCGACTTCCGACAACGCATTTTTGGTGACCATAAGGAAGGTGGATCTGATGCCTAA

Protein sequence

>Msa0174760

MSSELTFRGHETQQVNDEYSPKPNKPWLSVIRPIRYMLREQRLVFVLIGIVIASVFFTIIPSSSTSSSSSFSTRPYESDSISYFDRESKTTPAVYKQRAAAVVHSSGKIPLGIKRKGLRIVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIISFIIISLSLTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPDAKIVYRDNTEDDPHKRKPDISNAKEHLGWEPKVDLRKGLPLMVSDFRQRIFGDHKEGGSDA*