Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0526990 | XP_003626077.1 | 97.112 | 277 | 7 | 1 | 1 | 276 | 1 | 277 | 0.0 | 557 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0526990 | sp|Q5NB11|CHI10_ORYSJ | 71.186 | 236 | 68 | 0 | 41 | 276 | 55 | 290 | 2.64e-131 | 376 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0526990 | G7KUN3 | 97.112 | 277 | 7 | 1 | 1 | 276 | 1 | 277 | 0.0 | 557 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001510 | Msa0526990 | -0.804512 | 2.084672e-49 | -8.615850e-47 |
Msa0004180 | Msa0526990 | -0.835043 | 2.111466e-56 | -8.615850e-47 |
Msa0008600 | Msa0526990 | 0.800310 | 1.530171e-48 | -8.615850e-47 |
Msa0015070 | Msa0526990 | 0.833067 | 6.597366e-56 | -8.615850e-47 |
Msa0024650 | Msa0526990 | 0.813245 | 2.822247e-51 | -8.615850e-47 |
Msa0027020 | Msa0526990 | -0.817072 | 3.985826e-52 | -8.615850e-47 |
Msa0027120 | Msa0526990 | -0.800393 | 1.471682e-48 | -8.615850e-47 |
Msa0042210 | Msa0526990 | -0.802435 | 5.618701e-49 | -8.615850e-47 |
Msa0047560 | Msa0526990 | -0.824583 | 7.460329e-54 | -8.615850e-47 |
Msa0057000 | Msa0526990 | 0.806284 | 8.862233e-50 | -8.615850e-47 |
Msa0065520 | Msa0526990 | -0.823189 | 1.583482e-53 | -8.615850e-47 |
Msa0073110 | Msa0526990 | 0.800383 | 1.478652e-48 | -8.615850e-47 |
Msa0075080 | Msa0526990 | -0.839177 | 1.852478e-57 | -8.615850e-47 |
Msa0075820 | Msa0526990 | -0.805131 | 1.548007e-49 | -8.615850e-47 |
Msa0082290 | Msa0526990 | 0.808972 | 2.380995e-50 | -8.615850e-47 |
Msa0085470 | Msa0526990 | -0.803835 | 2.883711e-49 | -8.615850e-47 |
Msa0093360 | Msa0526990 | -0.808005 | 3.830090e-50 | -8.615850e-47 |
Msa0095890 | Msa0526990 | -0.841643 | 4.196798e-58 | -8.615850e-47 |
Msa0095910 | Msa0526990 | 0.807122 | 5.896146e-50 | -8.615850e-47 |
Msa0105140 | Msa0526990 | -0.801353 | 9.374295e-49 | -8.615850e-47 |
Msa0122170 | Msa0526990 | -0.800264 | 1.563713e-48 | -8.615850e-47 |
Msa0122930 | Msa0526990 | -0.836169 | 1.095301e-56 | -8.615850e-47 |
Msa0132080 | Msa0526990 | -0.801584 | 8.405906e-49 | -8.615850e-47 |
Msa0141090 | Msa0526990 | -0.838853 | 2.246522e-57 | -8.615850e-47 |
Msa0145590 | Msa0526990 | -0.814001 | 1.924102e-51 | -8.615850e-47 |
Msa0157030 | Msa0526990 | -0.801356 | 9.357564e-49 | -8.615850e-47 |
Msa0163690 | Msa0526990 | 0.823530 | 1.318036e-53 | -8.615850e-47 |
Msa0167160 | Msa0526990 | -0.817767 | 2.780433e-52 | -8.615850e-47 |
Msa0167570 | Msa0526990 | -0.842429 | 2.599735e-58 | -8.615850e-47 |
Msa0174760 | Msa0526990 | 0.820215 | 7.715092e-53 | -8.615850e-47 |
Msa0186240 | Msa0526990 | 0.811809 | 5.813993e-51 | -8.615850e-47 |
Msa0188670 | Msa0526990 | -0.817475 | 3.235073e-52 | -8.615850e-47 |
Msa0196580 | Msa0526990 | -0.809783 | 1.595018e-50 | -8.615850e-47 |
Msa0207250 | Msa0526990 | -0.821430 | 4.054662e-53 | -8.615850e-47 |
Msa0225080 | Msa0526990 | -0.820307 | 7.348764e-53 | -8.615850e-47 |
Msa0225280 | Msa0526990 | -0.815956 | 7.087887e-52 | -8.615850e-47 |
Msa0238460 | Msa0526990 | -0.809109 | 2.225345e-50 | -8.615850e-47 |
Msa0367380 | Msa0526990 | -0.818154 | 2.272578e-52 | -8.615850e-47 |
Msa0371010 | Msa0526990 | -0.828867 | 7.081508e-55 | -8.615850e-47 |
Msa0374840 | Msa0526990 | -0.839152 | 1.879355e-57 | -8.615850e-47 |
Msa0375100 | Msa0526990 | -0.835305 | 1.813412e-56 | -8.615850e-47 |
Msa0380470 | Msa0526990 | -0.824648 | 7.202612e-54 | -8.615850e-47 |
Msa0382020 | Msa0526990 | -0.821951 | 3.073200e-53 | -8.615850e-47 |
Msa0382050 | Msa0526990 | -0.816674 | 4.895500e-52 | -8.615850e-47 |
Msa0383460 | Msa0526990 | 0.821071 | 4.906150e-53 | -8.615850e-47 |
Msa0384140 | Msa0526990 | -0.804113 | 2.524383e-49 | -8.615850e-47 |
Msa0386230 | Msa0526990 | -0.804709 | 1.896419e-49 | -8.615850e-47 |
Msa0405200 | Msa0526990 | 0.814327 | 1.630418e-51 | -8.615850e-47 |
Msa0419150 | Msa0526990 | -0.821387 | 4.148252e-53 | -8.615850e-47 |
Msa0425810 | Msa0526990 | -0.800698 | 1.275384e-48 | -8.615850e-47 |
Msa0427230 | Msa0526990 | -0.817662 | 2.936014e-52 | -8.615850e-47 |
Msa0428270 | Msa0526990 | -0.819852 | 9.344860e-53 | -8.615850e-47 |
Msa0428300 | Msa0526990 | -0.817003 | 4.131639e-52 | -8.615850e-47 |
Msa0428720 | Msa0526990 | -0.823354 | 1.449012e-53 | -8.615850e-47 |
Msa0429990 | Msa0526990 | -0.806969 | 6.353031e-50 | -8.615850e-47 |
Msa0431270 | Msa0526990 | -0.815640 | 8.335074e-52 | -8.615850e-47 |
Msa0431550 | Msa0526990 | -0.815161 | 1.065044e-51 | -8.615850e-47 |
Msa0433090 | Msa0526990 | 0.819565 | 1.086666e-52 | -8.615850e-47 |
Msa0434300 | Msa0526990 | 0.800516 | 1.389205e-48 | -8.615850e-47 |
Msa0434830 | Msa0526990 | -0.810257 | 1.261337e-50 | -8.615850e-47 |
Msa0436660 | Msa0526990 | -0.810938 | 8.986598e-51 | -8.615850e-47 |
Msa0444770 | Msa0526990 | -0.808264 | 3.373440e-50 | -8.615850e-47 |
Msa0449500 | Msa0526990 | 0.824057 | 9.921012e-54 | -8.615850e-47 |
Msa0464980 | Msa0526990 | -0.822343 | 2.492176e-53 | -8.615850e-47 |
Msa0472570 | Msa0526990 | -0.807175 | 5.745787e-50 | -8.615850e-47 |
Msa0473740 | Msa0526990 | -0.819596 | 1.068658e-52 | -8.615850e-47 |
Msa0474630 | Msa0526990 | -0.802022 | 6.833151e-49 | -8.615850e-47 |
Msa0474660 | Msa0526990 | -0.819542 | 1.099588e-52 | -8.615850e-47 |
Msa0476560 | Msa0526990 | -0.811739 | 6.021160e-51 | -8.615850e-47 |
Msa0476600 | Msa0526990 | -0.803315 | 3.695998e-49 | -8.615850e-47 |
Msa0477390 | Msa0526990 | 0.807098 | 5.966779e-50 | -8.615850e-47 |
Msa0253230 | Msa0526990 | -0.805612 | 1.227275e-49 | -8.615850e-47 |
Msa0255770 | Msa0526990 | -0.804831 | 1.788154e-49 | -8.615850e-47 |
Msa0257760 | Msa0526990 | 0.809269 | 2.056440e-50 | -8.615850e-47 |
Msa0261350 | Msa0526990 | -0.804492 | 2.104994e-49 | -8.615850e-47 |
Msa0266150 | Msa0526990 | -0.811652 | 6.289757e-51 | -8.615850e-47 |
Msa0266330 | Msa0526990 | -0.815819 | 7.602265e-52 | -8.615850e-47 |
Msa0275730 | Msa0526990 | 0.804566 | 2.031032e-49 | -8.615850e-47 |
Msa0275980 | Msa0526990 | -0.816020 | 6.858938e-52 | -8.615850e-47 |
Msa0285580 | Msa0526990 | 0.803138 | 4.022152e-49 | -8.615850e-47 |
Msa0299130 | Msa0526990 | -0.813018 | 3.164293e-51 | -8.615850e-47 |
Msa0307820 | Msa0526990 | -0.802543 | 5.336440e-49 | -8.615850e-47 |
Msa0310270 | Msa0526990 | -0.801730 | 7.843960e-49 | -8.615850e-47 |
Msa0316080 | Msa0526990 | -0.805028 | 1.627002e-49 | -8.615850e-47 |
Msa0340700 | Msa0526990 | -0.808298 | 3.317454e-50 | -8.615850e-47 |
Msa0341950 | Msa0526990 | -0.815278 | 1.003584e-51 | -8.615850e-47 |
Msa0345050 | Msa0526990 | 0.809368 | 1.959115e-50 | -8.615850e-47 |
Msa0485260 | Msa0526990 | -0.800681 | 1.286020e-48 | -8.615850e-47 |
Msa0492330 | Msa0526990 | -0.842380 | 2.678775e-58 | -8.615850e-47 |
Msa0493870 | Msa0526990 | 0.804486 | 2.111275e-49 | -8.615850e-47 |
Msa0497680 | Msa0526990 | 0.836580 | 8.609981e-57 | -8.615850e-47 |
Msa0500580 | Msa0526990 | -0.833206 | 6.090746e-56 | -8.615850e-47 |
Msa0506700 | Msa0526990 | -0.806237 | 9.068148e-50 | -8.615850e-47 |
Msa0517820 | Msa0526990 | -0.804746 | 1.863323e-49 | -8.615850e-47 |
Msa0518150 | Msa0526990 | -0.803623 | 3.191068e-49 | -8.615850e-47 |
Msa0519070 | Msa0526990 | -0.816092 | 6.607927e-52 | -8.615850e-47 |
Msa0520550 | Msa0526990 | -0.823041 | 1.714290e-53 | -8.615850e-47 |
Msa0522140 | Msa0526990 | 0.808713 | 2.705549e-50 | -8.615850e-47 |
Msa0522170 | Msa0526990 | 0.807626 | 4.610388e-50 | -8.615850e-47 |
Msa0524710 | Msa0526990 | 0.820615 | 6.245445e-53 | -8.615850e-47 |
Msa0526990 | Msa0549700 | -0.807572 | 4.735169e-50 | -8.615850e-47 |
Msa0526990 | Msa0557240 | 0.808460 | 3.063924e-50 | -8.615850e-47 |
Msa0526990 | Msa0557440 | -0.804405 | 2.194897e-49 | -8.615850e-47 |
Msa0526990 | Msa0580890 | -0.818298 | 2.108137e-52 | -8.615850e-47 |
Msa0526990 | Msa0583270 | -0.802096 | 6.596328e-49 | -8.615850e-47 |
Msa0526990 | Msa0597370 | -0.803066 | 4.161974e-49 | -8.615850e-47 |
Msa0526990 | Msa0597820 | 0.811228 | 7.774145e-51 | -8.615850e-47 |
Msa0526990 | Msa0605150 | -0.804562 | 2.035755e-49 | -8.615850e-47 |
Msa0526990 | Msa0605210 | -0.807250 | 5.539832e-50 | -8.615850e-47 |
Msa0526990 | Msa0608720 | -0.803280 | 3.759333e-49 | -8.615850e-47 |
Msa0526990 | Msa0615460 | -0.800005 | 1.765236e-48 | -8.615850e-47 |
Msa0526990 | Msa0622450 | -0.819579 | 1.078632e-52 | -8.615850e-47 |
Msa0526990 | Msa0637590 | 0.801184 | 1.014891e-48 | -8.615850e-47 |
Msa0526990 | Msa0637700 | 0.811989 | 5.313219e-51 | -8.615850e-47 |
Msa0526990 | Msa0644220 | -0.800985 | 1.114579e-48 | -8.615850e-47 |
Msa0526990 | Msa0644340 | 0.806664 | 7.370614e-50 | -8.615850e-47 |
Msa0526990 | Msa0646030 | -0.801647 | 8.158971e-49 | -8.615850e-47 |
Msa0526990 | Msa0651820 | 0.806131 | 9.546429e-50 | -8.615850e-47 |
Msa0526990 | Msa0654560 | -0.809816 | 1.569482e-50 | -8.615850e-47 |
Msa0526990 | Msa0662230 | -0.804252 | 2.361803e-49 | -8.615850e-47 |
Msa0526990 | Msa0675630 | 0.802964 | 4.370136e-49 | -8.615850e-47 |
Msa0526990 | Msa0684030 | -0.815856 | 7.460630e-52 | -8.615850e-47 |
Msa0526990 | Msa0685860 | -0.803363 | 3.613159e-49 | -8.615850e-47 |
Msa0526990 | Msa0695250 | -0.811588 | 6.495863e-51 | -8.615850e-47 |
Msa0526990 | Msa0696600 | -0.814945 | 1.189320e-51 | -8.615850e-47 |
Msa0526990 | Msa0699900 | -0.800465 | 1.423147e-48 | -8.615850e-47 |
Msa0526990 | Msa0713570 | -0.816260 | 6.060799e-52 | -8.615850e-47 |
Msa0526990 | Msa0734700 | 0.827123 | 1.861632e-54 | -8.615850e-47 |
Msa0526990 | Msa0738460 | -0.803674 | 3.114985e-49 | -8.615850e-47 |
Msa0526990 | Msa0750200 | -0.815925 | 7.199135e-52 | -8.615850e-47 |
Msa0526990 | Msa0753590 | -0.832252 | 1.050825e-55 | -8.615850e-47 |
Msa0526990 | Msa0754880 | -0.804234 | 2.381906e-49 | -8.615850e-47 |
Msa0526990 | Msa0755550 | -0.814472 | 1.514230e-51 | -8.615850e-47 |
Msa0526990 | Msa0758880 | -0.810632 | 1.046775e-50 | -8.615850e-47 |
Msa0526990 | Msa0792490 | -0.825976 | 3.493791e-54 | -8.615850e-47 |
Msa0526990 | Msa0794900 | -0.816514 | 5.317783e-52 | -8.615850e-47 |
Msa0526990 | Msa0796840 | -0.800927 | 1.145458e-48 | -8.615850e-47 |
Msa0526990 | Msa0797180 | -0.812781 | 3.566913e-51 | -8.615850e-47 |
Msa0526990 | Msa0800120 | 0.804915 | 1.717569e-49 | -8.615850e-47 |
Msa0526990 | Msa0801920 | -0.812540 | 4.027750e-51 | -8.615850e-47 |
Msa0526990 | Msa0813610 | 0.835636 | 1.494888e-56 | -8.615850e-47 |
Msa0526990 | Msa0833200 | -0.845127 | 4.929955e-59 | -8.615850e-47 |
Msa0526990 | Msa0833980 | -0.820157 | 7.955137e-53 | -8.615850e-47 |
Msa0526990 | Msa0835050 | -0.815535 | 8.795286e-52 | -8.615850e-47 |
Msa0526990 | Msa0838120 | -0.813678 | 2.267043e-51 | -8.615850e-47 |
Msa0526990 | Msa0838210 | 0.814244 | 1.700054e-51 | -8.615850e-47 |
Msa0526990 | Msa0854230 | 0.831668 | 1.465317e-55 | -8.615850e-47 |
Msa0526990 | Msa0868500 | -0.814501 | 1.491994e-51 | -8.615850e-47 |
Msa0526990 | Msa0868510 | -0.816609 | 5.064240e-52 | -8.615850e-47 |
Msa0526990 | Msa0868520 | -0.817462 | 3.256332e-52 | -8.615850e-47 |
Msa0526990 | Msa0925940 | 0.801221 | 9.974575e-49 | -8.615850e-47 |
Msa0526990 | Msa0934800 | -0.804534 | 2.063293e-49 | -8.615850e-47 |
Msa0526990 | Msa0935840 | -0.839467 | 1.557441e-57 | -8.615850e-47 |
Msa0526990 | Msa0941410 | -0.815050 | 1.127306e-51 | -8.615850e-47 |
Msa0526990 | Msa0941420 | -0.821742 | 3.434612e-53 | -8.615850e-47 |
Msa0526990 | Msa0945160 | -0.812930 | 3.308666e-51 | -8.615850e-47 |
Msa0526990 | Msa0964400 | -0.808427 | 3.114115e-50 | -8.615850e-47 |
Msa0526990 | Msa0967890 | -0.803722 | 3.044448e-49 | -8.615850e-47 |
Msa0526990 | Msa0973010 | -0.828929 | 6.841405e-55 | -8.615850e-47 |
Msa0526990 | Msa0975950 | 0.802218 | 6.228233e-49 | -8.615850e-47 |
Msa0526990 | Msa0978540 | -0.814082 | 1.846709e-51 | -8.615850e-47 |
Msa0526990 | Msa0978550 | -0.818346 | 2.056235e-52 | -8.615850e-47 |
Msa0526990 | Msa0978560 | -0.819883 | 9.190841e-53 | -8.615850e-47 |
Msa0526990 | Msa0984230 | -0.818803 | 1.619553e-52 | -8.615850e-47 |
Msa0526990 | Msa1001120 | 0.823460 | 1.368997e-53 | -8.615850e-47 |
Msa0526990 | Msa1002550 | -0.826033 | 3.386830e-54 | -8.615850e-47 |
Msa0526990 | Msa1015360 | 0.801987 | 6.946387e-49 | -8.615850e-47 |
Msa0526990 | Msa1028890 | -0.824740 | 6.852757e-54 | -8.615850e-47 |
Msa0526990 | Msa1031190 | -0.814761 | 1.306691e-51 | -8.615850e-47 |
Msa0526990 | Msa1035050 | 0.811973 | 5.354784e-51 | -8.615850e-47 |
Msa0526990 | Msa1036260 | -0.834362 | 3.130928e-56 | -8.615850e-47 |
Msa0526990 | Msa1037440 | -0.803853 | 2.859146e-49 | -8.615850e-47 |
Msa0526990 | Msa1041250 | 0.807774 | 4.289108e-50 | -8.615850e-47 |
Msa0526990 | Msa1041570 | -0.816962 | 4.219704e-52 | -8.615850e-47 |
Msa0526990 | Msa1045750 | -0.802396 | 5.723966e-49 | -8.615850e-47 |
Msa0526990 | Msa1066770 | 0.829152 | 6.039240e-55 | -8.615850e-47 |
Msa0526990 | Msa1068010 | -0.822469 | 2.329418e-53 | -8.615850e-47 |
Msa0526990 | Msa1069250 | 0.802005 | 6.887785e-49 | -8.615850e-47 |
Msa0526990 | Msa1070370 | -0.814223 | 1.718603e-51 | -8.615850e-47 |
Msa0526990 | Msa1075090 | 0.807455 | 5.013926e-50 | -8.615850e-47 |
Msa0526990 | Msa1076530 | -0.808176 | 3.522204e-50 | -8.615850e-47 |
Msa0526990 | Msa1078120 | -0.812953 | 3.269943e-51 | -8.615850e-47 |
Msa0526990 | Msa1082980 | 0.931828 | 2.117514e-94 | -8.615850e-47 |
Msa0526990 | Msa1085820 | 0.813772 | 2.161015e-51 | -8.615850e-47 |
Msa0526990 | Msa1095880 | -0.803276 | 3.765897e-49 | -8.615850e-47 |
Msa0526990 | Msa1108560 | 0.814413 | 1.560090e-51 | -8.615850e-47 |
Msa0526990 | Msa1112190 | 0.802989 | 4.317434e-49 | -8.615850e-47 |
Msa0526990 | Msa1119420 | -0.810382 | 1.185382e-50 | -8.615850e-47 |
Msa0526990 | Msa1122710 | -0.806141 | 9.500034e-50 | -8.615850e-47 |
Msa0526990 | Msa1126320 | -0.806713 | 7.196194e-50 | -8.615850e-47 |
Msa0526990 | Msa1127720 | 0.966656 | 3.256317e-126 | -8.615850e-47 |
Msa0526990 | Msa1130150 | -0.831760 | 1.390628e-55 | -8.615850e-47 |
Msa0526990 | Msa1130850 | -0.813055 | 3.106321e-51 | -8.615850e-47 |
Msa0526990 | Msa1131300 | -0.833121 | 6.395967e-56 | -8.615850e-47 |
Msa0526990 | Msa1134800 | -0.801491 | 8.779843e-49 | -8.615850e-47 |
Msa0526990 | Msa1137210 | 0.818375 | 2.025568e-52 | -8.615850e-47 |
Msa0526990 | Msa1146010 | 0.829166 | 5.992577e-55 | -8.615850e-47 |
Msa0526990 | Msa1156430 | -0.805558 | 1.259754e-49 | -8.615850e-47 |
Msa0526990 | Msa1158180 | -0.811888 | 5.587836e-51 | -8.615850e-47 |
Msa0526990 | Msa1161060 | -0.830166 | 3.422453e-55 | -8.615850e-47 |
Msa0526990 | Msa1162870 | 0.818120 | 2.313574e-52 | -8.615850e-47 |
Msa0526990 | Msa1166470 | -0.813969 | 1.955569e-51 | -8.615850e-47 |
Msa0526990 | Msa1185270 | 0.831014 | 2.122528e-55 | -8.615850e-47 |
Msa0526990 | Msa1191530 | -0.807654 | 4.548301e-50 | -8.615850e-47 |
Msa0526990 | Msa1201760 | 0.812128 | 4.954467e-51 | -8.615850e-47 |
Msa0526990 | Msa1202800 | 0.812381 | 4.363005e-51 | -8.615850e-47 |
Msa0526990 | Msa1203320 | -0.818080 | 2.362485e-52 | -8.615850e-47 |
Msa0526990 | Msa1206330 | 0.812493 | 4.122897e-51 | -8.615850e-47 |
Msa0526990 | Msa1206380 | 0.805671 | 1.192928e-49 | -8.615850e-47 |
Msa0526990 | Msa1207660 | -0.801797 | 7.599720e-49 | -8.615850e-47 |
Msa0526990 | Msa1212150 | -0.801985 | 6.952615e-49 | -8.615850e-47 |
Msa0526990 | Msa1222900 | -0.804460 | 2.137525e-49 | -8.615850e-47 |
Msa0526990 | Msa1228260 | -0.813512 | 2.465226e-51 | -8.615850e-47 |
Msa0526990 | Msa1239050 | 0.814881 | 1.229342e-51 | -8.615850e-47 |
Msa0526990 | Msa1239190 | 0.805818 | 1.111010e-49 | -8.615850e-47 |
Msa0526990 | Msa1239210 | 0.814515 | 1.481280e-51 | -8.615850e-47 |
Msa0526990 | Msa1254670 | 0.800125 | 1.668544e-48 | -8.615850e-47 |
Msa0526990 | Msa1257860 | -0.802542 | 5.339640e-49 | -8.615850e-47 |
Msa0526990 | Msa1266750 | -0.808611 | 2.844660e-50 | -8.615850e-47 |
Msa0526990 | Msa1268360 | 0.804816 | 1.801688e-49 | -8.615850e-47 |
Msa0526990 | Msa1269730 | -0.800433 | 1.444855e-48 | -8.615850e-47 |
Msa0526990 | Msa1271220 | -0.812795 | 3.542020e-51 | -8.615850e-47 |
Msa0526990 | Msa1279060 | 0.815476 | 9.066209e-52 | -8.615850e-47 |
Msa0526990 | Msa1280540 | 0.811709 | 6.113136e-51 | -8.615850e-47 |
Msa0526990 | Msa1291070 | -0.822716 | 2.041664e-53 | -8.615850e-47 |
Msa0526990 | Msa1294770 | 0.815224 | 1.031596e-51 | -8.615850e-47 |
Msa0526990 | Msa1295650 | 0.801409 | 9.128905e-49 | -8.615850e-47 |
Msa0526990 | Msa1303690 | -0.814985 | 1.165488e-51 | -8.615850e-47 |
Msa0526990 | Msa1306220 | 0.808526 | 2.965627e-50 | -8.615850e-47 |
Msa0526990 | Msa1308430 | -0.809522 | 1.815257e-50 | -8.615850e-47 |
Msa0526990 | Msa1319760 | 0.830885 | 2.282110e-55 | -8.615850e-47 |
Msa0526990 | Msa1341710 | -0.814579 | 1.434081e-51 | -8.615850e-47 |
Msa0526990 | Msa1341850 | -0.804002 | 2.662685e-49 | -8.615850e-47 |
Msa0526990 | Msa1350130 | -0.804133 | 2.500065e-49 | -8.615850e-47 |
Msa0526990 | Msa1350590 | -0.814072 | 1.856212e-51 | -8.615850e-47 |
Msa0526990 | Msa1363170 | -0.817316 | 3.512310e-52 | -8.615850e-47 |
Msa0526990 | Msa1364690 | 0.818603 | 1.798375e-52 | -8.615850e-47 |
Msa0526990 | Msa1366480 | 0.826413 | 2.749885e-54 | -8.615850e-47 |
Msa0526990 | Msa1372460 | -0.804009 | 2.652726e-49 | -8.615850e-47 |
Msa0526990 | Msa1373930 | -0.824955 | 6.098555e-54 | -8.615850e-47 |
Msa0526990 | Msa1375570 | -0.813205 | 2.879226e-51 | -8.615850e-47 |
Msa0526990 | Msa1386910 | -0.806033 | 1.001342e-49 | -8.615850e-47 |
Msa0526990 | Msa1388010 | -0.816643 | 4.975920e-52 | -8.615850e-47 |
Msa0526990 | Msa1395380 | -0.824162 | 9.374499e-54 | -8.615850e-47 |
Msa0526990 | Msa1403820 | -0.805266 | 1.450387e-49 | -8.615850e-47 |
Msa0526990 | Msa1405040 | -0.803355 | 3.626138e-49 | -8.615850e-47 |
Msa0526990 | Msa1408230 | -0.821767 | 3.388606e-53 | -8.615850e-47 |
Msa0526990 | Msa1412330 | -0.843119 | 1.704561e-58 | -8.615850e-47 |
Msa0526990 | Msa1412810 | -0.811296 | 7.516135e-51 | -8.615850e-47 |
Msa0526990 | Msa1415510 | -0.816664 | 4.921094e-52 | -8.615850e-47 |
Msa0526990 | Msa1423560 | -0.802508 | 5.425799e-49 | -8.615850e-47 |
Msa0526990 | Msa1434860 | -0.802114 | 6.541332e-49 | -8.615850e-47 |
Msa0526990 | Msa1437590 | 0.820771 | 5.752682e-53 | -8.615850e-47 |
Msa0526990 | Msa1443280 | -0.802586 | 5.228754e-49 | -8.615850e-47 |
Msa0526990 | Msa1444690 | -0.801509 | 8.706799e-49 | -8.615850e-47 |
Msa0526990 | Msa1454300 | -0.820771 | 5.751984e-53 | -8.615850e-47 |
Msa0526990 | Msa1458270 | 0.807185 | 5.719978e-50 | -8.615850e-47 |
Msa0526990 | Msa1462700 | -0.806530 | 7.866062e-50 | -8.615850e-47 |
Msa0526990 | Msa1463640 | 0.840748 | 7.212709e-58 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0526990 | MtrunA17_Chr7g0270841 | 97.112 | 277 | 7 | 1 | 1 | 276 | 1 | 277 | 0.0 | 557 |
Msa0526990 | MtrunA17_Chr3g0145981 | 54.959 | 242 | 108 | 1 | 35 | 276 | 91 | 331 | 9.97e-99 | 293 |
Msa0526990 | MtrunA17_Chr8g0370851 | 54.132 | 242 | 109 | 1 | 35 | 276 | 80 | 319 | 1.74e-95 | 283 |
Msa0526990 | MtrunA17_Chr8g0370821 | 50.826 | 242 | 117 | 1 | 35 | 276 | 91 | 330 | 7.06e-90 | 270 |
Msa0526990 | MtrunA17_Chr8g0370831 | 50.826 | 242 | 104 | 1 | 35 | 276 | 82 | 308 | 1.37e-86 | 260 |
Msa0526990 | MtrunA17_Chr7g0221751 | 38.735 | 253 | 146 | 4 | 33 | 276 | 58 | 310 | 3.90e-53 | 175 |
Msa0526990 | MtrunA17_Chr2g0294721 | 38.889 | 252 | 144 | 6 | 35 | 276 | 56 | 307 | 3.14e-52 | 173 |
Msa0526990 | MtrunA17_Chr2g0329791 | 38.397 | 237 | 110 | 6 | 35 | 270 | 81 | 282 | 3.64e-52 | 171 |
Msa0526990 | MtrunA17_Chr1g0206111 | 38.034 | 234 | 141 | 3 | 33 | 262 | 61 | 294 | 3.99e-50 | 167 |
Msa0526990 | MtrunA17_Chr2g0329781 | 36.134 | 238 | 119 | 5 | 33 | 270 | 59 | 263 | 3.08e-48 | 161 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0526990 | AT4G01700.1 | 69.549 | 266 | 81 | 0 | 11 | 276 | 14 | 279 | 5.60e-146 | 410 |
Msa0526990 | AT1G02360.1 | 72.314 | 242 | 67 | 0 | 35 | 276 | 30 | 271 | 6.79e-140 | 395 |
Msa0526990 | AT1G02360.3 | 67.279 | 272 | 77 | 2 | 9 | 276 | 60 | 323 | 7.16e-140 | 397 |
Msa0526990 | AT1G02360.2 | 67.279 | 272 | 77 | 2 | 9 | 276 | 54 | 317 | 8.34e-140 | 396 |
Msa0526990 | AT3G12500.1 | 58.264 | 242 | 100 | 1 | 35 | 276 | 86 | 326 | 2.17e-106 | 312 |
Msa0526990 | AT3G16920.1 | 39.286 | 252 | 143 | 7 | 35 | 276 | 68 | 319 | 4.17e-52 | 173 |
Msa0526990 | AT3G16920.2 | 39.286 | 252 | 143 | 7 | 35 | 276 | 92 | 343 | 6.84e-52 | 173 |
Msa0526990 | AT1G05850.1 | 37.450 | 251 | 148 | 5 | 35 | 276 | 60 | 310 | 2.02e-51 | 171 |
Msa0526990 | AT1G05850.2 | 37.450 | 251 | 148 | 5 | 35 | 276 | 60 | 310 | 2.02e-51 | 171 |
Msa0526990 | AT3G54420.1 | 36.820 | 239 | 115 | 5 | 33 | 270 | 70 | 273 | 3.47e-49 | 164 |
Msa0526990 | AT2G43590.1 | 37.131 | 237 | 108 | 7 | 35 | 270 | 68 | 264 | 1.15e-48 | 162 |
Msa0526990 | AT2G43610.1 | 37.500 | 240 | 108 | 7 | 31 | 270 | 84 | 281 | 2.64e-42 | 146 |
Msa0526990 | AT2G43580.1 | 34.599 | 237 | 114 | 7 | 35 | 270 | 69 | 265 | 8.95e-42 | 144 |
Msa0526990 | AT2G43570.1 | 34.413 | 247 | 117 | 6 | 29 | 270 | 71 | 277 | 5.25e-41 | 143 |
Msa0526990 | AT2G43620.1 | 35.833 | 240 | 112 | 7 | 31 | 270 | 86 | 283 | 1.99e-40 | 142 |
Msa0526990 | AT1G56680.1 | 34.156 | 243 | 115 | 9 | 31 | 270 | 80 | 280 | 2.07e-30 | 115 |
Msa0526990 | AT1G56680.2 | 34.156 | 243 | 115 | 9 | 31 | 270 | 103 | 303 | 5.02e-30 | 115 |
Msa0526990 | AT2G43600.1 | 34.440 | 241 | 114 | 10 | 31 | 270 | 76 | 273 | 2.87e-28 | 109 |
Msa0526990 | AT2G43600.2 | 34.440 | 241 | 114 | 10 | 31 | 270 | 97 | 294 | 4.45e-28 | 109 |
Msa0526990 | AT3G47540.1 | 28.992 | 238 | 114 | 9 | 35 | 270 | 30 | 214 | 1.01e-26 | 103 |
Msa0526990 | AT3G47540.2 | 28.139 | 231 | 111 | 9 | 35 | 263 | 30 | 207 | 1.07e-22 | 95.1 |
Find 67 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTGGATACTGGACCTAATT+TGG | 0.146711 | 3_4:-81143600 | Msa0526990:CDS |
CTTTCCTCCTCTGCATCTTT+AGG | 0.179427 | 3_4:-81144988 | Msa0526990:CDS |
AGAGAAGAGATTGGTATAAT+AGG | 0.189791 | 3_4:+81144943 | None:intergenic |
ACCAAATTGAGGAAAATATT+TGG | 0.190558 | 3_4:+81144822 | None:intergenic |
AGCAATAAAGCAAAATAATA+TGG | 0.234582 | 3_4:+81145011 | None:intergenic |
TTAGGAGTTGAATCATTTAT+TGG | 0.247252 | 3_4:-81144970 | Msa0526990:CDS |
TGTGATGGTTGGAAAATATT+TGG | 0.256663 | 3_4:-81143771 | Msa0526990:CDS |
TCAAAACTGCTCTATGGTTT+TGG | 0.260706 | 3_4:-81143829 | Msa0526990:CDS |
GCTAATCGCACAGCTGGTTT+TGG | 0.280719 | 3_4:-81143728 | Msa0526990:CDS |
TGATATGCACAATCCAAATT+AGG | 0.305058 | 3_4:+81143587 | None:intergenic |
TTGTGTAGGAATTATAACTA+TGG | 0.344973 | 3_4:-81143926 | Msa0526990:intron |
TAGGAGTTGAATCATTTATT+GGG | 0.345727 | 3_4:-81144969 | Msa0526990:CDS |
AAAGATTGGCCTTGCTTTGA+AGG | 0.347412 | 3_4:-81144631 | Msa0526990:CDS |
GAGAAGAGATTGGTATAATA+GGG | 0.356153 | 3_4:+81144944 | None:intergenic |
TTGCTTTCAAAACTGCTCTA+TGG | 0.359827 | 3_4:-81143835 | Msa0526990:CDS |
AAGCATAAGCCCCAAGAAAA+TGG | 0.365932 | 3_4:+81144700 | None:intergenic |
GCAAGAGTTAATGATCGAAT+TGG | 0.385700 | 3_4:-81143653 | Msa0526990:CDS |
AAGTTGTTCAATGTGGATAC+TGG | 0.403395 | 3_4:-81143611 | Msa0526990:CDS |
AAAACACAAAACATATATAA+AGG | 0.406924 | 3_4:+81143525 | None:intergenic |
GAATTGTTTGATACAATCTC+TGG | 0.409450 | 3_4:+81143863 | None:intergenic |
TTTCCTCAATTTGGTACTAC+AGG | 0.418672 | 3_4:-81144814 | Msa0526990:CDS |
GGGAAGGCGTTAGGATTTGA+TGG | 0.420884 | 3_4:-81143896 | Msa0526990:CDS |
CCCCAAGAAAATGGTCCATC+AGG | 0.433362 | 3_4:+81144709 | None:intergenic |
GCAATAAAGCAAAATAATAT+GGG | 0.436056 | 3_4:+81145012 | None:intergenic |
GTATACCAAGATAGTTGAAT+AGG | 0.440524 | 3_4:+81144586 | None:intergenic |
TCATTAACTCTTGCATCATC+AGG | 0.440723 | 3_4:+81143662 | None:intergenic |
GTAGGAATATTGTGTCATAA+AGG | 0.444283 | 3_4:+81144908 | None:intergenic |
GAGGTCCTATTCAACTATCT+TGG | 0.447585 | 3_4:-81144591 | Msa0526990:intron |
GGGTGGGCCACTGCACCTGA+TGG | 0.450425 | 3_4:-81144724 | Msa0526990:CDS |
TTACTTATTAGAGAAGAGAT+TGG | 0.451038 | 3_4:+81144934 | None:intergenic |
TGGAAGCTTCAATGAAGGAT+TGG | 0.458638 | 3_4:+81144842 | None:intergenic |
GAATCACAGTAGTTACTTTG+AGG | 0.463755 | 3_4:+81144661 | None:intergenic |
GGACCAGCAGGGAAGGCGTT+AGG | 0.472444 | 3_4:-81143905 | Msa0526990:CDS |
AAATATAGTCAATGGTGGAT+TGG | 0.476185 | 3_4:-81143696 | Msa0526990:CDS |
AATTATAACTATGGACCAGC+AGG | 0.477533 | 3_4:-81143917 | Msa0526990:CDS |
AATCCTAACGCCTTCCCTGC+TGG | 0.489708 | 3_4:+81143902 | None:intergenic |
ACATTGTGACAAGAAGGTAT+TGG | 0.494924 | 3_4:+81143791 | None:intergenic |
GTGATTCTACTGACAAAGAT+TGG | 0.496296 | 3_4:-81144645 | Msa0526990:CDS |
ATATTTGGAAGCTTCAATGA+AGG | 0.511487 | 3_4:+81144837 | None:intergenic |
GCTTCAATGAAGGATTGGTA+AGG | 0.525028 | 3_4:+81144847 | None:intergenic |
CAGATTTCACATGAAACTAC+TGG | 0.531637 | 3_4:-81144748 | Msa0526990:CDS |
ATAGAAGCTAATCGCACAGC+TGG | 0.541134 | 3_4:-81143734 | Msa0526990:CDS |
AGCTATCTCACGCTTTCTTG+TGG | 0.548914 | 3_4:+81144783 | None:intergenic |
GGCAAAAGTTACAAAGGAAG+AGG | 0.557753 | 3_4:-81144610 | Msa0526990:CDS |
ACCATCACATTGTGACAAGA+AGG | 0.564779 | 3_4:+81143785 | None:intergenic |
ACATGAAACTACTGGTGGGT+GGG | 0.569584 | 3_4:-81144740 | Msa0526990:CDS |
AACTCCTAAAGATGCAGAGG+AGG | 0.579707 | 3_4:+81144984 | None:intergenic |
GGAAGGCGTTAGGATTTGAT+GGG | 0.584389 | 3_4:-81143895 | Msa0526990:CDS |
CAACCTGTAGTACCAAATTG+AGG | 0.584601 | 3_4:+81144811 | None:intergenic |
GTCAATGGTGGATTGGAATG+TGG | 0.588138 | 3_4:-81143689 | Msa0526990:CDS |
CAATAAAGCAAAATAATATG+GGG | 0.588254 | 3_4:+81145013 | None:intergenic |
TTTGAAGGCAAAAGTTACAA+AGG | 0.591242 | 3_4:-81144616 | Msa0526990:CDS |
TCTTGTCACAATGTGATGGT+TGG | 0.593829 | 3_4:-81143782 | Msa0526990:CDS |
ATGCAGTGTCATCTTTGTGT+AGG | 0.594953 | 3_4:+81144890 | None:intergenic |
CACATGAAACTACTGGTGGG+TGG | 0.597128 | 3_4:-81144741 | Msa0526990:CDS |
TAACTATGGACCAGCAGGGA+AGG | 0.603344 | 3_4:-81143912 | Msa0526990:CDS |
CTTCAATGAAGGATTGGTAA+GGG | 0.607116 | 3_4:+81144848 | None:intergenic |
AAATGGTCCATCAGGTGCAG+TGG | 0.617726 | 3_4:+81144717 | None:intergenic |
GTGACAAATATAGTCAATGG+TGG | 0.618848 | 3_4:-81143701 | Msa0526990:CDS |
TTGGTGACAAATATAGTCAA+TGG | 0.622222 | 3_4:-81143704 | Msa0526990:CDS |
TTCAACTCCTAAAGATGCAG+AGG | 0.624622 | 3_4:+81144981 | None:intergenic |
ACCTTCTTGTCACAATGTGA+TGG | 0.640940 | 3_4:-81143786 | Msa0526990:CDS |
ATTTCACATGAAACTACTGG+TGG | 0.650794 | 3_4:-81144745 | Msa0526990:CDS |
AATAAAGCAAAATAATATGG+GGG | 0.669386 | 3_4:+81145014 | None:intergenic |
ATTATAACTATGGACCAGCA+GGG | 0.676909 | 3_4:-81143916 | Msa0526990:CDS |
ATATACTAAGTTGTTCAATG+TGG | 0.678623 | 3_4:-81143618 | Msa0526990:CDS |
TTTCACATGAAACTACTGGT+GGG | 0.698219 | 3_4:-81144744 | Msa0526990:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATACGAAATAATTACTAAAT+CGG | + | chr3_4:81144250-81144269 | None:intergenic | 15.0% |
!! | TTGTCAACAAAAAAAAAAAA+AGG | - | chr3_4:81144421-81144440 | Msa0526990:intron | 15.0% |
!!! | TCAGAAATCTTTTTAATAAT+TGG | - | chr3_4:81145015-81145034 | Msa0526990:CDS | 15.0% |
!! | AAAACACAAAACATATATAA+AGG | + | chr3_4:81145060-81145079 | None:intergenic | 15.0% |
!! | ATACGAAATAATTACTAAAT+CGG | + | chr3_4:81144250-81144269 | None:intergenic | 15.0% |
!! | TTGTCAACAAAAAAAAAAAA+AGG | - | chr3_4:81144421-81144440 | Msa0526990:intron | 15.0% |
!!! | TCAGAAATCTTTTTAATAAT+TGG | - | chr3_4:81145015-81145034 | Msa0526990:CDS | 15.0% |
!! | AAAACACAAAACATATATAA+AGG | + | chr3_4:81145060-81145079 | None:intergenic | 15.0% |
!!! | TGTCATTTTCTTTAAAAAGA+AGG | + | chr3_4:81143535-81143554 | None:intergenic | 20.0% |
!! | AATAAAGCAAAATAATATGG+GGG | + | chr3_4:81143571-81143590 | None:intergenic | 20.0% |
!! | CAATAAAGCAAAATAATATG+GGG | + | chr3_4:81143572-81143591 | None:intergenic | 20.0% |
!! | GCAATAAAGCAAAATAATAT+GGG | + | chr3_4:81143573-81143592 | None:intergenic | 20.0% |
!! | AGCAATAAAGCAAAATAATA+TGG | + | chr3_4:81143574-81143593 | None:intergenic | 20.0% |
!! | TACGAAATAATTACTAAATC+GGG | + | chr3_4:81144249-81144268 | None:intergenic | 20.0% |
!! | TGATTAAGTATAATATGGTT+GGG | + | chr3_4:81144482-81144501 | None:intergenic | 20.0% |
!! | TTGATTAAGTATAATATGGT+TGG | + | chr3_4:81144483-81144502 | None:intergenic | 20.0% |
!!! | TGTCATTTTCTTTAAAAAGA+AGG | + | chr3_4:81143535-81143554 | None:intergenic | 20.0% |
!! | AATAAAGCAAAATAATATGG+GGG | + | chr3_4:81143571-81143590 | None:intergenic | 20.0% |
!! | CAATAAAGCAAAATAATATG+GGG | + | chr3_4:81143572-81143591 | None:intergenic | 20.0% |
!! | GCAATAAAGCAAAATAATAT+GGG | + | chr3_4:81143573-81143592 | None:intergenic | 20.0% |
!! | AGCAATAAAGCAAAATAATA+TGG | + | chr3_4:81143574-81143593 | None:intergenic | 20.0% |
!! | TACGAAATAATTACTAAATC+GGG | + | chr3_4:81144249-81144268 | None:intergenic | 20.0% |
!! | TGATTAAGTATAATATGGTT+GGG | + | chr3_4:81144482-81144501 | None:intergenic | 20.0% |
!! | TTGATTAAGTATAATATGGT+TGG | + | chr3_4:81144483-81144502 | None:intergenic | 20.0% |
! | TTAGGAGTTGAATCATTTAT+TGG | - | chr3_4:81143612-81143631 | Msa0526990:CDS | 25.0% |
! | TAGGAGTTGAATCATTTATT+GGG | - | chr3_4:81143613-81143632 | Msa0526990:CDS | 25.0% |
! | TTACTTATTAGAGAAGAGAT+TGG | + | chr3_4:81143651-81143670 | None:intergenic | 25.0% |
!! | TCCAAATATTTTCCTCAATT+TGG | - | chr3_4:81143759-81143778 | Msa0526990:CDS | 25.0% |
! | ACCAAATTGAGGAAAATATT+TGG | + | chr3_4:81143763-81143782 | None:intergenic | 25.0% |
!!! | CATAGAAACAATTTTAGGTT+TGG | + | chr3_4:81144102-81144121 | None:intergenic | 25.0% |
! | TCGCTTGATTAAGTATAATA+TGG | + | chr3_4:81144487-81144506 | None:intergenic | 25.0% |
! | TTGTGTAGGAATTATAACTA+TGG | - | chr3_4:81144656-81144675 | Msa0526990:CDS | 25.0% |
! | ATATACTAAGTTGTTCAATG+TGG | - | chr3_4:81144964-81144983 | Msa0526990:CDS | 25.0% |
! | TTAGGAGTTGAATCATTTAT+TGG | - | chr3_4:81143612-81143631 | Msa0526990:CDS | 25.0% |
! | TAGGAGTTGAATCATTTATT+GGG | - | chr3_4:81143613-81143632 | Msa0526990:CDS | 25.0% |
! | TTACTTATTAGAGAAGAGAT+TGG | + | chr3_4:81143651-81143670 | None:intergenic | 25.0% |
!! | TCCAAATATTTTCCTCAATT+TGG | - | chr3_4:81143759-81143778 | Msa0526990:CDS | 25.0% |
! | ACCAAATTGAGGAAAATATT+TGG | + | chr3_4:81143763-81143782 | None:intergenic | 25.0% |
!!! | CATAGAAACAATTTTAGGTT+TGG | + | chr3_4:81144102-81144121 | None:intergenic | 25.0% |
! | TCGCTTGATTAAGTATAATA+TGG | + | chr3_4:81144487-81144506 | None:intergenic | 25.0% |
! | TTGTGTAGGAATTATAACTA+TGG | - | chr3_4:81144656-81144675 | Msa0526990:CDS | 25.0% |
! | ATATACTAAGTTGTTCAATG+TGG | - | chr3_4:81144964-81144983 | Msa0526990:CDS | 25.0% |
GAGAAGAGATTGGTATAATA+GGG | + | chr3_4:81143641-81143660 | None:intergenic | 30.0% | |
AGAGAAGAGATTGGTATAAT+AGG | + | chr3_4:81143642-81143661 | None:intergenic | 30.0% | |
GTAGGAATATTGTGTCATAA+AGG | + | chr3_4:81143677-81143696 | None:intergenic | 30.0% | |
! | TTGGTAAGGGTAAAAGTTTT+TGG | + | chr3_4:81143724-81143743 | None:intergenic | 30.0% |
ATATTTGGAAGCTTCAATGA+AGG | + | chr3_4:81143748-81143767 | None:intergenic | 30.0% | |
TTTGAAGGCAAAAGTTACAA+AGG | - | chr3_4:81143966-81143985 | Msa0526990:intron | 30.0% | |
GTATACCAAGATAGTTGAAT+AGG | + | chr3_4:81143999-81144018 | None:intergenic | 30.0% | |
! | GAGCTCATAGAAACAATTTT+AGG | + | chr3_4:81144107-81144126 | None:intergenic | 30.0% |
! | AGGATCATATGGATTAAAAC+TGG | + | chr3_4:81144180-81144199 | None:intergenic | 30.0% |
! | TTTGAAACTAATTTAGCGAC+CGG | + | chr3_4:81144293-81144312 | None:intergenic | 30.0% |
AGCTAATGAGTTTCAGTTAA+AGG | - | chr3_4:81144519-81144538 | Msa0526990:intron | 30.0% | |
TACACAAAAGTTTATGAGAG+GGG | + | chr3_4:81144643-81144662 | None:intergenic | 30.0% | |
CTACACAAAAGTTTATGAGA+GGG | + | chr3_4:81144644-81144663 | None:intergenic | 30.0% | |
GAATTGTTTGATACAATCTC+TGG | + | chr3_4:81144722-81144741 | None:intergenic | 30.0% | |
TGTGATGGTTGGAAAATATT+TGG | - | chr3_4:81144811-81144830 | Msa0526990:CDS | 30.0% | |
! | TTGGTGACAAATATAGTCAA+TGG | - | chr3_4:81144878-81144897 | Msa0526990:CDS | 30.0% |
!! | AAATATAGTCAATGGTGGAT+TGG | - | chr3_4:81144886-81144905 | Msa0526990:CDS | 30.0% |
TGATATGCACAATCCAAATT+AGG | + | chr3_4:81144998-81145017 | None:intergenic | 30.0% | |
GAGAAGAGATTGGTATAATA+GGG | + | chr3_4:81143641-81143660 | None:intergenic | 30.0% | |
AGAGAAGAGATTGGTATAAT+AGG | + | chr3_4:81143642-81143661 | None:intergenic | 30.0% | |
GTAGGAATATTGTGTCATAA+AGG | + | chr3_4:81143677-81143696 | None:intergenic | 30.0% | |
! | TTGGTAAGGGTAAAAGTTTT+TGG | + | chr3_4:81143724-81143743 | None:intergenic | 30.0% |
ATATTTGGAAGCTTCAATGA+AGG | + | chr3_4:81143748-81143767 | None:intergenic | 30.0% | |
TTTGAAGGCAAAAGTTACAA+AGG | - | chr3_4:81143966-81143985 | Msa0526990:intron | 30.0% | |
GTATACCAAGATAGTTGAAT+AGG | + | chr3_4:81143999-81144018 | None:intergenic | 30.0% | |
! | GAGCTCATAGAAACAATTTT+AGG | + | chr3_4:81144107-81144126 | None:intergenic | 30.0% |
! | AGGATCATATGGATTAAAAC+TGG | + | chr3_4:81144180-81144199 | None:intergenic | 30.0% |
! | TTTGAAACTAATTTAGCGAC+CGG | + | chr3_4:81144293-81144312 | None:intergenic | 30.0% |
AGCTAATGAGTTTCAGTTAA+AGG | - | chr3_4:81144519-81144538 | Msa0526990:intron | 30.0% | |
TACACAAAAGTTTATGAGAG+GGG | + | chr3_4:81144643-81144662 | None:intergenic | 30.0% | |
CTACACAAAAGTTTATGAGA+GGG | + | chr3_4:81144644-81144663 | None:intergenic | 30.0% | |
GAATTGTTTGATACAATCTC+TGG | + | chr3_4:81144722-81144741 | None:intergenic | 30.0% | |
TGTGATGGTTGGAAAATATT+TGG | - | chr3_4:81144811-81144830 | Msa0526990:CDS | 30.0% | |
! | TTGGTGACAAATATAGTCAA+TGG | - | chr3_4:81144878-81144897 | Msa0526990:CDS | 30.0% |
!! | AAATATAGTCAATGGTGGAT+TGG | - | chr3_4:81144886-81144905 | Msa0526990:CDS | 30.0% |
TGATATGCACAATCCAAATT+AGG | + | chr3_4:81144998-81145017 | None:intergenic | 30.0% | |
AAATAATATGGGGGTGAGAA+TGG | + | chr3_4:81143562-81143581 | None:intergenic | 35.0% | |
!!! | TAAGGGTAAAAGTTTTTGGC+AGG | + | chr3_4:81143720-81143739 | None:intergenic | 35.0% |
! | CTTCAATGAAGGATTGGTAA+GGG | + | chr3_4:81143737-81143756 | None:intergenic | 35.0% |
TTTCCTCAATTTGGTACTAC+AGG | - | chr3_4:81143768-81143787 | Msa0526990:CDS | 35.0% | |
CAGATTTCACATGAAACTAC+TGG | - | chr3_4:81143834-81143853 | Msa0526990:CDS | 35.0% | |
ATTTCACATGAAACTACTGG+TGG | - | chr3_4:81143837-81143856 | Msa0526990:CDS | 35.0% | |
TTTCACATGAAACTACTGGT+GGG | - | chr3_4:81143838-81143857 | Msa0526990:CDS | 35.0% | |
! | GAATCACAGTAGTTACTTTG+AGG | + | chr3_4:81143924-81143943 | None:intergenic | 35.0% |
GTGATTCTACTGACAAAGAT+TGG | - | chr3_4:81143937-81143956 | Msa0526990:intron | 35.0% | |
! | TAACTTTTGCCTTCAAAGCA+AGG | + | chr3_4:81143963-81143982 | None:intergenic | 35.0% |
TGTGGATTTGGACAAAGAAT+TGG | + | chr3_4:81144076-81144095 | None:intergenic | 35.0% | |
!!! | CAATTTTAGGTTTGGATGTG+TGG | + | chr3_4:81144094-81144113 | None:intergenic | 35.0% |
AGCAGCGTTAAAATTCTTGA+CGG | - | chr3_4:81144154-81144173 | Msa0526990:intron | 35.0% | |
AAAACTTATTTCCCAAGCTG+AGG | + | chr3_4:81144205-81144224 | None:intergenic | 35.0% | |
TATTTCGTATCTGTAGTGAC+CGG | - | chr3_4:81144260-81144279 | Msa0526990:intron | 35.0% | |
CCTACACAAAAGTTTATGAG+AGG | + | chr3_4:81144645-81144664 | None:intergenic | 35.0% | |
! | CCTCTCATAAACTTTTGTGT+AGG | - | chr3_4:81144642-81144661 | Msa0526990:CDS | 35.0% |
AATTATAACTATGGACCAGC+AGG | - | chr3_4:81144665-81144684 | Msa0526990:CDS | 35.0% | |
ATTATAACTATGGACCAGCA+GGG | - | chr3_4:81144666-81144685 | Msa0526990:CDS | 35.0% | |
TTGCTTTCAAAACTGCTCTA+TGG | - | chr3_4:81144747-81144766 | Msa0526990:CDS | 35.0% | |
! | TCAAAACTGCTCTATGGTTT+TGG | - | chr3_4:81144753-81144772 | Msa0526990:CDS | 35.0% |
! | ACATTGTGACAAGAAGGTAT+TGG | + | chr3_4:81144794-81144813 | None:intergenic | 35.0% |
GTGACAAATATAGTCAATGG+TGG | - | chr3_4:81144881-81144900 | Msa0526990:CDS | 35.0% | |
TCATTAACTCTTGCATCATC+AGG | + | chr3_4:81144923-81144942 | None:intergenic | 35.0% | |
GCAAGAGTTAATGATCGAAT+TGG | - | chr3_4:81144929-81144948 | Msa0526990:CDS | 35.0% | |
AAGTTGTTCAATGTGGATAC+TGG | - | chr3_4:81144971-81144990 | Msa0526990:CDS | 35.0% | |
AAATAATATGGGGGTGAGAA+TGG | + | chr3_4:81143562-81143581 | None:intergenic | 35.0% | |
!!! | TAAGGGTAAAAGTTTTTGGC+AGG | + | chr3_4:81143720-81143739 | None:intergenic | 35.0% |
! | CTTCAATGAAGGATTGGTAA+GGG | + | chr3_4:81143737-81143756 | None:intergenic | 35.0% |
TTTCCTCAATTTGGTACTAC+AGG | - | chr3_4:81143768-81143787 | Msa0526990:CDS | 35.0% | |
CAGATTTCACATGAAACTAC+TGG | - | chr3_4:81143834-81143853 | Msa0526990:CDS | 35.0% | |
ATTTCACATGAAACTACTGG+TGG | - | chr3_4:81143837-81143856 | Msa0526990:CDS | 35.0% | |
TTTCACATGAAACTACTGGT+GGG | - | chr3_4:81143838-81143857 | Msa0526990:CDS | 35.0% | |
! | GAATCACAGTAGTTACTTTG+AGG | + | chr3_4:81143924-81143943 | None:intergenic | 35.0% |
GTGATTCTACTGACAAAGAT+TGG | - | chr3_4:81143937-81143956 | Msa0526990:intron | 35.0% | |
! | TAACTTTTGCCTTCAAAGCA+AGG | + | chr3_4:81143963-81143982 | None:intergenic | 35.0% |
TGTGGATTTGGACAAAGAAT+TGG | + | chr3_4:81144076-81144095 | None:intergenic | 35.0% | |
!!! | CAATTTTAGGTTTGGATGTG+TGG | + | chr3_4:81144094-81144113 | None:intergenic | 35.0% |
AGCAGCGTTAAAATTCTTGA+CGG | - | chr3_4:81144154-81144173 | Msa0526990:intron | 35.0% | |
AAAACTTATTTCCCAAGCTG+AGG | + | chr3_4:81144205-81144224 | None:intergenic | 35.0% | |
TATTTCGTATCTGTAGTGAC+CGG | - | chr3_4:81144260-81144279 | Msa0526990:intron | 35.0% | |
CCTACACAAAAGTTTATGAG+AGG | + | chr3_4:81144645-81144664 | None:intergenic | 35.0% | |
! | CCTCTCATAAACTTTTGTGT+AGG | - | chr3_4:81144642-81144661 | Msa0526990:CDS | 35.0% |
AATTATAACTATGGACCAGC+AGG | - | chr3_4:81144665-81144684 | Msa0526990:CDS | 35.0% | |
ATTATAACTATGGACCAGCA+GGG | - | chr3_4:81144666-81144685 | Msa0526990:CDS | 35.0% | |
TTGCTTTCAAAACTGCTCTA+TGG | - | chr3_4:81144747-81144766 | Msa0526990:CDS | 35.0% | |
! | TCAAAACTGCTCTATGGTTT+TGG | - | chr3_4:81144753-81144772 | Msa0526990:CDS | 35.0% |
! | ACATTGTGACAAGAAGGTAT+TGG | + | chr3_4:81144794-81144813 | None:intergenic | 35.0% |
GTGACAAATATAGTCAATGG+TGG | - | chr3_4:81144881-81144900 | Msa0526990:CDS | 35.0% | |
TCATTAACTCTTGCATCATC+AGG | + | chr3_4:81144923-81144942 | None:intergenic | 35.0% | |
GCAAGAGTTAATGATCGAAT+TGG | - | chr3_4:81144929-81144948 | Msa0526990:CDS | 35.0% | |
AAGTTGTTCAATGTGGATAC+TGG | - | chr3_4:81144971-81144990 | Msa0526990:CDS | 35.0% | |
TTCAACTCCTAAAGATGCAG+AGG | + | chr3_4:81143604-81143623 | None:intergenic | 40.0% | |
ATGCAGTGTCATCTTTGTGT+AGG | + | chr3_4:81143695-81143714 | None:intergenic | 40.0% | |
! | GCTTCAATGAAGGATTGGTA+AGG | + | chr3_4:81143738-81143757 | None:intergenic | 40.0% |
TGGAAGCTTCAATGAAGGAT+TGG | + | chr3_4:81143743-81143762 | None:intergenic | 40.0% | |
CAACCTGTAGTACCAAATTG+AGG | + | chr3_4:81143774-81143793 | None:intergenic | 40.0% | |
!! | ACCTGATGGACCATTTTCTT+GGG | - | chr3_4:81143872-81143891 | Msa0526990:CDS | 40.0% |
AAGCATAAGCCCCAAGAAAA+TGG | + | chr3_4:81143885-81143904 | None:intergenic | 40.0% | |
!! | AAAGATTGGCCTTGCTTTGA+AGG | - | chr3_4:81143951-81143970 | Msa0526990:intron | 40.0% |
GGCAAAAGTTACAAAGGAAG+AGG | - | chr3_4:81143972-81143991 | Msa0526990:intron | 40.0% | |
GAGGTCCTATTCAACTATCT+TGG | - | chr3_4:81143991-81144010 | Msa0526990:intron | 40.0% | |
TAGGTTTGGATGTGTGGATT+TGG | + | chr3_4:81144088-81144107 | None:intergenic | 40.0% | |
! | TGTAGTGACCGGTTTATAAC+CGG | - | chr3_4:81144271-81144290 | Msa0526990:intron | 40.0% |
TTTAGCGACCGGTTATAAAC+CGG | + | chr3_4:81144282-81144301 | None:intergenic | 40.0% | |
ACCTTCTTGTCACAATGTGA+TGG | - | chr3_4:81144796-81144815 | Msa0526990:CDS | 40.0% | |
ACCATCACATTGTGACAAGA+AGG | + | chr3_4:81144800-81144819 | None:intergenic | 40.0% | |
TCTTGTCACAATGTGATGGT+TGG | - | chr3_4:81144800-81144819 | Msa0526990:CDS | 40.0% | |
TGTGGATACTGGACCTAATT+TGG | - | chr3_4:81144982-81145001 | Msa0526990:CDS | 40.0% | |
TTCAACTCCTAAAGATGCAG+AGG | + | chr3_4:81143604-81143623 | None:intergenic | 40.0% | |
ATGCAGTGTCATCTTTGTGT+AGG | + | chr3_4:81143695-81143714 | None:intergenic | 40.0% | |
! | GCTTCAATGAAGGATTGGTA+AGG | + | chr3_4:81143738-81143757 | None:intergenic | 40.0% |
TGGAAGCTTCAATGAAGGAT+TGG | + | chr3_4:81143743-81143762 | None:intergenic | 40.0% | |
CAACCTGTAGTACCAAATTG+AGG | + | chr3_4:81143774-81143793 | None:intergenic | 40.0% | |
!! | ACCTGATGGACCATTTTCTT+GGG | - | chr3_4:81143872-81143891 | Msa0526990:CDS | 40.0% |
AAGCATAAGCCCCAAGAAAA+TGG | + | chr3_4:81143885-81143904 | None:intergenic | 40.0% | |
!! | AAAGATTGGCCTTGCTTTGA+AGG | - | chr3_4:81143951-81143970 | Msa0526990:intron | 40.0% |
GGCAAAAGTTACAAAGGAAG+AGG | - | chr3_4:81143972-81143991 | Msa0526990:intron | 40.0% | |
GAGGTCCTATTCAACTATCT+TGG | - | chr3_4:81143991-81144010 | Msa0526990:intron | 40.0% | |
TAGGTTTGGATGTGTGGATT+TGG | + | chr3_4:81144088-81144107 | None:intergenic | 40.0% | |
! | TGTAGTGACCGGTTTATAAC+CGG | - | chr3_4:81144271-81144290 | Msa0526990:intron | 40.0% |
TTTAGCGACCGGTTATAAAC+CGG | + | chr3_4:81144282-81144301 | None:intergenic | 40.0% | |
ACCTTCTTGTCACAATGTGA+TGG | - | chr3_4:81144796-81144815 | Msa0526990:CDS | 40.0% | |
ACCATCACATTGTGACAAGA+AGG | + | chr3_4:81144800-81144819 | None:intergenic | 40.0% | |
TCTTGTCACAATGTGATGGT+TGG | - | chr3_4:81144800-81144819 | Msa0526990:CDS | 40.0% | |
TGTGGATACTGGACCTAATT+TGG | - | chr3_4:81144982-81145001 | Msa0526990:CDS | 40.0% | |
CTTTCCTCCTCTGCATCTTT+AGG | - | chr3_4:81143594-81143613 | Msa0526990:CDS | 45.0% | |
AACTCCTAAAGATGCAGAGG+AGG | + | chr3_4:81143601-81143620 | None:intergenic | 45.0% | |
AGCTATCTCACGCTTTCTTG+TGG | + | chr3_4:81143802-81143821 | None:intergenic | 45.0% | |
! | ACATGAAACTACTGGTGGGT+GGG | - | chr3_4:81143842-81143861 | Msa0526990:CDS | 45.0% |
!! | CACCTGATGGACCATTTTCT+TGG | - | chr3_4:81143871-81143890 | Msa0526990:CDS | 45.0% |
!! | CCTGATGGACCATTTTCTTG+GGG | - | chr3_4:81143873-81143892 | Msa0526990:CDS | 45.0% |
AAGCTGAGGTGAGGATCATA+TGG | + | chr3_4:81144191-81144210 | None:intergenic | 45.0% | |
ATATGATCCTCACCTCAGCT+TGG | - | chr3_4:81144190-81144209 | Msa0526990:intron | 45.0% | |
TATGATCCTCACCTCAGCTT+GGG | - | chr3_4:81144191-81144210 | Msa0526990:intron | 45.0% | |
TTATTTCCCAAGCTGAGGTG+AGG | + | chr3_4:81144200-81144219 | None:intergenic | 45.0% | |
!! | GGAAGGCGTTAGGATTTGAT+GGG | - | chr3_4:81144687-81144706 | Msa0526990:CDS | 45.0% |
ATAGAAGCTAATCGCACAGC+TGG | - | chr3_4:81144848-81144867 | Msa0526990:CDS | 45.0% | |
!! | GTCAATGGTGGATTGGAATG+TGG | - | chr3_4:81144893-81144912 | Msa0526990:CDS | 45.0% |
CTTTCCTCCTCTGCATCTTT+AGG | - | chr3_4:81143594-81143613 | Msa0526990:CDS | 45.0% | |
AACTCCTAAAGATGCAGAGG+AGG | + | chr3_4:81143601-81143620 | None:intergenic | 45.0% | |
AGCTATCTCACGCTTTCTTG+TGG | + | chr3_4:81143802-81143821 | None:intergenic | 45.0% | |
! | ACATGAAACTACTGGTGGGT+GGG | - | chr3_4:81143842-81143861 | Msa0526990:CDS | 45.0% |
!! | CACCTGATGGACCATTTTCT+TGG | - | chr3_4:81143871-81143890 | Msa0526990:CDS | 45.0% |
!! | CCTGATGGACCATTTTCTTG+GGG | - | chr3_4:81143873-81143892 | Msa0526990:CDS | 45.0% |
AAGCTGAGGTGAGGATCATA+TGG | + | chr3_4:81144191-81144210 | None:intergenic | 45.0% | |
ATATGATCCTCACCTCAGCT+TGG | - | chr3_4:81144190-81144209 | Msa0526990:intron | 45.0% | |
TATGATCCTCACCTCAGCTT+GGG | - | chr3_4:81144191-81144210 | Msa0526990:intron | 45.0% | |
TTATTTCCCAAGCTGAGGTG+AGG | + | chr3_4:81144200-81144219 | None:intergenic | 45.0% | |
!! | GGAAGGCGTTAGGATTTGAT+GGG | - | chr3_4:81144687-81144706 | Msa0526990:CDS | 45.0% |
ATAGAAGCTAATCGCACAGC+TGG | - | chr3_4:81144848-81144867 | Msa0526990:CDS | 45.0% | |
!! | GTCAATGGTGGATTGGAATG+TGG | - | chr3_4:81144893-81144912 | Msa0526990:CDS | 45.0% |
!! | TATTAGATTAAATTATTATT+TGG | - | chr3_4:81144043-81144062 | Msa0526990:intron | 5.0% |
!! | TATTAGATTAAATTATTATT+TGG | - | chr3_4:81144043-81144062 | Msa0526990:intron | 5.0% |
CACATGAAACTACTGGTGGG+TGG | - | chr3_4:81143841-81143860 | Msa0526990:CDS | 50.0% | |
AAATGGTCCATCAGGTGCAG+TGG | + | chr3_4:81143868-81143887 | None:intergenic | 50.0% | |
CCCCAAGAAAATGGTCCATC+AGG | + | chr3_4:81143876-81143895 | None:intergenic | 50.0% | |
TAACTATGGACCAGCAGGGA+AGG | - | chr3_4:81144670-81144689 | Msa0526990:CDS | 50.0% | |
!! | GGGAAGGCGTTAGGATTTGA+TGG | - | chr3_4:81144686-81144705 | Msa0526990:CDS | 50.0% |
!! | GCTAATCGCACAGCTGGTTT+TGG | - | chr3_4:81144854-81144873 | Msa0526990:CDS | 50.0% |
!!! | TCGCACAGCTGGTTTTGGAT+TGG | - | chr3_4:81144859-81144878 | Msa0526990:CDS | 50.0% |
CACATGAAACTACTGGTGGG+TGG | - | chr3_4:81143841-81143860 | Msa0526990:CDS | 50.0% | |
AAATGGTCCATCAGGTGCAG+TGG | + | chr3_4:81143868-81143887 | None:intergenic | 50.0% | |
CCCCAAGAAAATGGTCCATC+AGG | + | chr3_4:81143876-81143895 | None:intergenic | 50.0% | |
TAACTATGGACCAGCAGGGA+AGG | - | chr3_4:81144670-81144689 | Msa0526990:CDS | 50.0% | |
!! | GGGAAGGCGTTAGGATTTGA+TGG | - | chr3_4:81144686-81144705 | Msa0526990:CDS | 50.0% |
!! | GCTAATCGCACAGCTGGTTT+TGG | - | chr3_4:81144854-81144873 | Msa0526990:CDS | 50.0% |
!!! | TCGCACAGCTGGTTTTGGAT+TGG | - | chr3_4:81144859-81144878 | Msa0526990:CDS | 50.0% |
AATCCTAACGCCTTCCCTGC+TGG | + | chr3_4:81144683-81144702 | None:intergenic | 55.0% | |
AATCCTAACGCCTTCCCTGC+TGG | + | chr3_4:81144683-81144702 | None:intergenic | 55.0% | |
!! | GGACCAGCAGGGAAGGCGTT+AGG | - | chr3_4:81144677-81144696 | Msa0526990:CDS | 65.0% |
!! | GGACCAGCAGGGAAGGCGTT+AGG | - | chr3_4:81144677-81144696 | Msa0526990:CDS | 65.0% |
GGGTGGGCCACTGCACCTGA+TGG | - | chr3_4:81143858-81143877 | Msa0526990:CDS | 70.0% | |
GGGTGGGCCACTGCACCTGA+TGG | - | chr3_4:81143858-81143877 | Msa0526990:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 81143516 | 81145088 | 81143516 | ID=Msa0526990;Name=Msa0526990 |
chr3_4 | mRNA | 81143516 | 81145088 | 81143516 | ID=Msa0526990-mRNA-1;Parent=Msa0526990;Name=Msa0526990-mRNA-1;_AED=0.06;_eAED=0.06;_QI=33|1|1|1|1|1|2|58|276 |
chr3_4 | exon | 81143516 | 81143940 | 81143516 | ID=Msa0526990-mRNA-1:exon:24471;Parent=Msa0526990-mRNA-1 |
chr3_4 | exon | 81144592 | 81145088 | 81144592 | ID=Msa0526990-mRNA-1:exon:24470;Parent=Msa0526990-mRNA-1 |
chr3_4 | five_prime_UTR | 81145056 | 81145088 | 81145056 | ID=Msa0526990-mRNA-1:five_prime_utr;Parent=Msa0526990-mRNA-1 |
chr3_4 | CDS | 81144592 | 81145055 | 81144592 | ID=Msa0526990-mRNA-1:cds;Parent=Msa0526990-mRNA-1 |
chr3_4 | CDS | 81143574 | 81143940 | 81143574 | ID=Msa0526990-mRNA-1:cds;Parent=Msa0526990-mRNA-1 |
chr3_4 | three_prime_UTR | 81143516 | 81143573 | 81143516 | ID=Msa0526990-mRNA-1:three_prime_utr;Parent=Msa0526990-mRNA-1 |
Gene Sequence |
Protein sequence |