AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0099430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0099430 MtrunA17_Chr1g0150941 98.035 509 10 0 1 509 1 509 0.0 1043
Msa0099430 MtrunA17_Chr3g0091141 46.973 479 229 9 37 506 81 543 1.85e-151 444
Msa0099430 MtrunA17_Chr4g0020621 45.607 478 240 7 37 505 57 523 3.52e-149 437
Msa0099430 MtrunA17_Chr7g0257061 44.223 502 254 10 18 505 49 538 1.42e-147 434
Msa0099430 MtrunA17_Chr3g0141981 47.579 475 232 10 37 503 57 522 6.40e-142 419
Msa0099430 MtrunA17_Chr2g0299371 43.487 499 243 13 36 506 53 540 3.20e-133 397
Msa0099430 MtrunA17_Chr4g0071111 40.472 509 265 13 17 505 37 527 1.47e-130 389
Msa0099430 MtrunA17_Chr4g0071121 42.887 485 244 14 35 504 52 518 5.00e-122 367
Msa0099430 MtrunA17_Chr2g0299361 39.697 330 164 8 183 504 9 311 3.97e-70 226
Msa0099430 MtrunA17_Chr2g0299351 39.053 169 79 4 35 187 49 209 3.78e-29 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0099430 AT5G21482.1 61.185 523 186 5 1 506 1 523 0.0 655
Msa0099430 AT2G41510.1 45.570 474 243 8 38 505 77 541 5.58e-147 433
Msa0099430 AT2G41510.2 45.474 475 244 8 37 505 138 603 2.16e-146 434
Msa0099430 AT3G63440.1 45.303 479 242 8 37 505 60 528 1.10e-144 426
Msa0099430 AT1G75450.1 47.737 486 234 13 29 503 44 520 4.65e-143 422
Msa0099430 AT1G75450.2 47.639 487 234 14 29 503 40 517 2.46e-141 417
Msa0099430 AT5G56970.1 42.585 472 258 7 37 505 58 519 1.76e-128 384
Msa0099430 AT2G19500.1 41.263 475 257 11 35 503 43 501 1.29e-117 355
Msa0099430 AT4G29740.2 40.412 485 264 9 35 504 50 524 8.40e-117 354
Msa0099430 AT2G41510.3 45.522 402 196 9 16 405 50 440 8.54e-112 338
Msa0099430 AT5G56970.2 44.086 372 199 6 37 405 58 423 1.32e-98 304
Msa0099430 AT4G29740.1 40.155 386 209 8 35 405 50 428 3.51e-84 267
Msa0099430 AT4G29740.3 44.490 245 122 3 35 266 50 293 5.87e-63 210

Find 178 sgRNAs with CRISPR-Local

Find 583 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATTATTTAAGTTGGTTTC+TGG 0.147486 1_3:+5597817 None:intergenic
GACAAACCGGGTTGAAAATT+TGG 0.149145 1_3:+5604876 None:intergenic
TCTTTACTAGCGATGGAATT+AGG 0.152257 1_3:+5605859 None:intergenic
ATAATTTGAATTACCATATC+TGG 0.190405 1_3:+5605289 None:intergenic
CGCCATGGCTTGGCCGTTGA+TGG 0.241138 1_3:+5605705 None:intergenic
ACGTTTCCGGTGGGGCATTA+TGG 0.267117 1_3:-5605600 Msa0099430:CDS
TGCGACACTTTGGGGATAAA+TGG 0.271384 1_3:-5597910 Msa0099430:CDS
TTTGCTTCACTTGGTGGTCT+TGG 0.275872 1_3:-5605358 Msa0099430:CDS
CTTTACTAGCGATGGAATTA+GGG 0.278545 1_3:+5605860 None:intergenic
GTTCCACACGTCGACGTTTC+CGG 0.291921 1_3:-5605613 Msa0099430:CDS
ATGCTAAAGCCAAAGGTATA+TGG 0.292797 1_3:-5603115 Msa0099430:CDS
GGTAAGCTATCATGTTTGTT+TGG 0.300397 1_3:+5605965 None:intergenic
TACCTTGAACACTTCGTTCA+TGG 0.302711 1_3:-5605946 Msa0099430:CDS
GGGACCACCTACTGATAAAT+TGG 0.310615 1_3:-5598026 Msa0099430:CDS
GGCTTGTTGAAGAACGATTC+TGG 0.324479 1_3:+5605312 None:intergenic
TGATGAACCATTGTAGTAAT+TGG 0.325750 1_3:+5597684 None:intergenic
ACCACATCGGCGGTGGTGTA+AGG 0.326905 1_3:+5605793 None:intergenic
AACGGCAAACGTAACGGAAT+TGG 0.333855 1_3:-5605443 Msa0099430:CDS
AGAATTGGATGCGACACTTT+GGG 0.334189 1_3:-5597919 Msa0099430:CDS
CGTTTCCGGTGGGGCATTAT+GGG 0.338199 1_3:-5605599 Msa0099430:CDS
CTAATTAATATTATTTAAGT+TGG 0.346858 1_3:+5597810 None:intergenic
GTTTGTCTTCCTTCTTCAGC+TGG 0.347023 1_3:-5604860 Msa0099430:CDS
GCGGAGTACGGCGAGGGGAG+TGG 0.353548 1_3:+5605816 None:intergenic
TCCGTTACGTTTGCCGTTTG+AGG 0.363428 1_3:+5605448 None:intergenic
CTTGGTGGTCTTGGTCAGTT+TGG 0.364537 1_3:-5605349 Msa0099430:CDS
AACCATTGTAGTAATTGGTT+GGG 0.364988 1_3:+5597689 None:intergenic
GTAAGCTATCATGTTTGTTT+GGG 0.372447 1_3:+5605966 None:intergenic
TAATCAAAACCGTCACCTTC+TGG 0.374704 1_3:+5604971 None:intergenic
ACGGAATTGGAAGTTGTTAC+TGG 0.376042 1_3:-5605430 Msa0099430:CDS
AAAATCAGCAATGTCGGTCT+TGG 0.394703 1_3:+5603058 None:intergenic
ACTACACGTCTCAGGAGAAT+TGG 0.396585 1_3:-5597934 Msa0099430:CDS
CGCCGCCACTGTTAAATTTG+TGG 0.405726 1_3:+5605744 None:intergenic
GTCCTTTCTCCGCCATGGCT+TGG 0.407600 1_3:+5605695 None:intergenic
AAGTGGATAGATTGCTTGGA+GGG 0.409011 1_3:-5603220 Msa0099430:CDS
AGGTCGTGGACGGATTATCT+TGG 0.416052 1_3:-5605532 Msa0099430:CDS
GAGAATTGGATGCGACACTT+TGG 0.419306 1_3:-5597920 Msa0099430:CDS
AGAGATGAAACGTCGTCGTT+TGG 0.424313 1_3:+5605904 None:intergenic
TTCCATGAACGAAGTGTTCA+AGG 0.426707 1_3:+5605944 None:intergenic
TAATTTGAATTACCATATCT+GGG 0.427257 1_3:+5605290 None:intergenic
TTGGAAGTTGTTACTGGTAA+AGG 0.428929 1_3:-5605424 Msa0099430:CDS
TGTGAAATGAAGAAGAGTTT+CGG 0.429316 1_3:+5605992 None:intergenic
TCTTCCTTCTTCAGCTGGAC+CGG 0.429397 1_3:-5604855 Msa0099430:CDS
GGTGATTTACTCGGAATTTG+AGG 0.430629 1_3:-5605029 Msa0099430:CDS
CGATGGAATTAGGGGCGAAA+TGG 0.432931 1_3:+5605869 None:intergenic
AGGTGCATCCCATATACCTT+TGG 0.435349 1_3:+5603106 None:intergenic
AGTGGTCAGACTTTCCGTTA+TGG 0.435886 1_3:-5605472 Msa0099430:CDS
GCTGAAGAAGGAAGACAAAC+CGG 0.448502 1_3:+5604863 None:intergenic
AATTATAGGTGAGGTGGATG+AGG 0.449429 1_3:-5605051 Msa0099430:intron
TTCGAACCCATCGGAATTGT+GGG 0.454639 1_3:+5604899 None:intergenic
GTTCGAACCCATCGGAATTG+TGG 0.455887 1_3:+5604898 None:intergenic
TAGAAAGTGGATAGATTGCT+TGG 0.458245 1_3:-5603224 Msa0099430:CDS
TTAAGCTTGTTCCGAGGTCG+TGG 0.462870 1_3:-5605546 Msa0099430:CDS
TCTTCAACAAGCCCCAGATA+TGG 0.463973 1_3:-5605302 Msa0099430:intron
TGCTAAAGCCAAAGGTATAT+GGG 0.464646 1_3:-5603114 Msa0099430:CDS
AACAGTGGGTACACTAGAAT+GGG 0.464745 1_3:+5602990 None:intergenic
GGTCGTGGACGGATTATCTT+GGG 0.467250 1_3:-5605531 Msa0099430:CDS
ATTTATTCCACCACCACCTA+AGG 0.468688 1_3:-5598047 Msa0099430:CDS
CAACAGTGGGTACACTAGAA+TGG 0.469023 1_3:+5602989 None:intergenic
GGGCGAAATGGAAAGAAGAT+TGG 0.474103 1_3:+5605881 None:intergenic
TACTAAAGATGCAGAGTGGC+TGG 0.476282 1_3:-5605002 Msa0099430:CDS
GGCCAAGCCATGGCGGAGAA+AGG 0.478685 1_3:-5605697 Msa0099430:CDS
TTCAGTTAAAAGGGAAGCTA+CGG 0.483363 1_3:+5606019 None:intergenic
ATCCTCAAACATGGGGTTGG+TGG 0.488134 1_3:-5603014 Msa0099430:CDS
AGCTCTAAGCAATAGAGAAC+CGG 0.488364 1_3:+5604836 None:intergenic
TTATCAGTAGGTGGTCCCTT+AGG 0.488494 1_3:+5598031 None:intergenic
GACCACCAACCCCATGTTTG+AGG 0.489413 1_3:+5603012 None:intergenic
GGAGGGTTGAGATTTGTTGA+GGG 0.491332 1_3:-5603203 Msa0099430:CDS
GATTATCTTGGGTTGACGGT+GGG 0.491823 1_3:-5605520 Msa0099430:CDS
TGTTGAGGGAATAAAATTTG+AGG 0.496430 1_3:-5603189 Msa0099430:CDS
GATGAAACGTCGTCGTTTGG+TGG 0.497366 1_3:+5605907 None:intergenic
GGTGGTCCCTTAGGTGGTGG+TGG 0.502048 1_3:+5598040 None:intergenic
TCCATCGCTAGTAAAGACTT+TGG 0.502870 1_3:-5605853 Msa0099430:CDS
TCGATCTTCTGAAGTTAATA+CGG 0.504348 1_3:-5604789 Msa0099430:intron
CCACATCGGCGGTGGTGTAA+GGG 0.506838 1_3:+5605794 None:intergenic
GCCAAAGTCTTTACTAGCGA+TGG 0.507471 1_3:+5605852 None:intergenic
TCTTCCTCACTACACGTCTC+AGG 0.507862 1_3:-5597942 Msa0099430:CDS
TATCTTGGGTTGACGGTGGG+TGG 0.508422 1_3:-5605517 Msa0099430:CDS
CCATTGGCTATACTTGCACC+TGG 0.512449 1_3:-5597854 Msa0099430:CDS
ACAGTGGCGGCGCGTGGTAA+CGG 0.517231 1_3:-5605733 Msa0099430:CDS
TTGCCGTTTGAGGACCATAA+CGG 0.518469 1_3:+5605458 None:intergenic
GCTTGTTCCGAGGTCGTGGA+CGG 0.521292 1_3:-5605542 Msa0099430:CDS
ACCATTGTAGTAATTGGTTG+GGG 0.523199 1_3:+5597690 None:intergenic
GGTGGTGTAAGGGCGGAGTA+CGG 0.523423 1_3:+5605804 None:intergenic
TCAAGAAAATCCTCAAACAT+GGG 0.525014 1_3:-5603022 Msa0099430:CDS
GTGATTAATTATAGGTGAGG+TGG 0.525879 1_3:-5605057 Msa0099430:intron
GAAACAACAACAAGATCGAT+GGG 0.526881 1_3:+5597716 None:intergenic
GACAAGTCCTTTCTCCGCCA+TGG 0.527704 1_3:+5605690 None:intergenic
AACAATGACGACCCTTGTAA+TGG 0.528629 1_3:-5604926 Msa0099430:CDS
TATTCAATTGTGCTACAACA+AGG 0.537041 1_3:-5597984 Msa0099430:CDS
TTTCCGTTATGGTCCTCAAA+CGG 0.538238 1_3:-5605461 Msa0099430:CDS
TCCTCAAACGGCAAACGTAA+CGG 0.539282 1_3:-5605449 Msa0099430:CDS
GTAAGGGCGGAGTACGGCGA+GGG 0.539751 1_3:+5605810 None:intergenic
GTAGGTGGTCCCTTAGGTGG+TGG 0.540886 1_3:+5598037 None:intergenic
TGTGCCACCAATTTATCAGT+AGG 0.542453 1_3:+5598019 None:intergenic
ATTGTGGGCCAACCATTACA+AGG 0.542464 1_3:+5604914 None:intergenic
GACGGATTATCTTGGGTTGA+CGG 0.542938 1_3:-5605524 Msa0099430:CDS
CGCCACTGTTAAATTTGTGG+TGG 0.542938 1_3:+5605747 None:intergenic
ACGTGTAAAGCGTGTGGAAG+AGG 0.543242 1_3:-5603138 Msa0099430:CDS
CTCCATCAACGGCCAAGCCA+TGG 0.544156 1_3:-5605707 Msa0099430:CDS
GAACCATTGTAGTAATTGGT+TGG 0.544245 1_3:+5597688 None:intergenic
ATTATAGGTGAGGTGGATGA+GGG 0.546580 1_3:-5605050 Msa0099430:intron
TCAGTAGGTGGTCCCTTAGG+TGG 0.547015 1_3:+5598034 None:intergenic
TGGTTGGCCCACAATTCCGA+TGG 0.547575 1_3:-5604906 Msa0099430:CDS
CGACATGCGAGCCACGGCGG+AGG 0.549400 1_3:-5605665 Msa0099430:CDS
AGATAATCCGTCCACGACCT+CGG 0.550163 1_3:+5605535 None:intergenic
ATGTAGAAAATGTTGCTGTC+TGG 0.552926 1_3:+5598085 None:intergenic
GAGTACGGCGAGGGGAGTGG+AGG 0.555436 1_3:+5605819 None:intergenic
TGGAGGGTTGAGATTTGTTG+AGG 0.555521 1_3:-5603204 Msa0099430:CDS
CACACGTCGACGTTTCCGGT+GGG 0.555761 1_3:-5605609 Msa0099430:CDS
GGATTATCTTGGGTTGACGG+TGG 0.555995 1_3:-5605521 Msa0099430:CDS
ATTCAATTGTGCTACAACAA+GGG 0.556005 1_3:-5597983 Msa0099430:CDS
TCCCCAACCAATTACTACAA+TGG 0.556720 1_3:-5597691 Msa0099430:three_prime_UTR
AGAACCGGTCCAGCTGAAGA+AGG 0.557947 1_3:+5604851 None:intergenic
AAAATTTGGTTCGAACCCAT+CGG 0.558165 1_3:+5604890 None:intergenic
TAGGTGGTGGTGGAATAAAT+CGG 0.560506 1_3:+5598050 None:intergenic
CCGCCGTGGCTCGCATGTCG+AGG 0.560775 1_3:+5605668 None:intergenic
CCCTTACACCACCGCCGATG+TGG 0.562433 1_3:-5605794 Msa0099430:CDS
CTGAAGAAGGAAGACAAACC+GGG 0.562836 1_3:+5604864 None:intergenic
AAAGTGGATAGATTGCTTGG+AGG 0.565909 1_3:-5603221 Msa0099430:CDS
ATGACGACCCTTGTAATGGT+TGG 0.566251 1_3:-5604922 Msa0099430:CDS
TCGACGTAGAGAAGTTGAAA+AGG 0.566784 1_3:+5605640 None:intergenic
GGATGATAGACACTCGGTAG+TGG 0.567626 1_3:-5598110 Msa0099430:CDS
ATCGCTAGTAAAGACTTTGG+CGG 0.568106 1_3:-5605850 Msa0099430:CDS
TTTCAACTTCTCTACGTCGA+CGG 0.568492 1_3:-5605637 Msa0099430:CDS
AGAAACAACAACAAGATCGA+TGG 0.569428 1_3:+5597715 None:intergenic
CCACACGTCGACGTTTCCGG+TGG 0.571833 1_3:-5605610 Msa0099430:CDS
CACCACAAATTTAACAGTGG+CGG 0.573395 1_3:-5605746 Msa0099430:CDS
AAAATCCTCAAACATGGGGT+TGG 0.574467 1_3:-5603017 Msa0099430:CDS
TTCAAGAAAATCCTCAAACA+TGG 0.574533 1_3:-5603023 Msa0099430:CDS
AATTTAACAGTGGCGGCGCG+TGG 0.576208 1_3:-5605739 Msa0099430:CDS
ACGATCAAAATCAGCAATGT+CGG 0.577104 1_3:+5603052 None:intergenic
GACACAAACATGTTCAACCA+TGG 0.577551 1_3:+5603080 None:intergenic
TTTATATATAGGATACGCAA+AGG 0.580837 1_3:+5597610 None:intergenic
TTCTTCCCATAATGCCCCAC+CGG 0.584444 1_3:+5605594 None:intergenic
GTGGATGAGGGTGATTTACT+CGG 0.585431 1_3:-5605038 Msa0099430:CDS
TTTATTCCACCACCACCTAA+GGG 0.590375 1_3:-5598046 Msa0099430:CDS
TTATCTAACGCCGGTGTCAG+TGG 0.591550 1_3:-5605490 Msa0099430:CDS
CTTACTTGCTTCGCAACAGT+GGG 0.592991 1_3:+5602976 None:intergenic
CCACCGGAAACGTCGACGTG+TGG 0.593175 1_3:+5605610 None:intergenic
AACATGTTCAACCATGGGTG+AGG 0.595226 1_3:+5603086 None:intergenic
TGAGGATGATGTGAAGTACA+TGG 0.595819 1_3:-5603171 Msa0099430:CDS
ACACGTCGACGTTTCCGGTG+GGG 0.596713 1_3:-5605608 Msa0099430:CDS
TATGGGATGCACCTCACCCA+TGG 0.601998 1_3:-5603097 Msa0099430:CDS
GAATTGGATGCGACACTTTG+GGG 0.604652 1_3:-5597918 Msa0099430:CDS
AATATGAAAACAAAATTACA+AGG 0.605619 1_3:+5597746 None:intergenic
TAAGGGCGGAGTACGGCGAG+GGG 0.607594 1_3:+5605811 None:intergenic
ACCACCTACTGATAAATTGG+TGG 0.607929 1_3:-5598023 Msa0099430:CDS
GCCACCAATTTATCAGTAGG+TGG 0.612550 1_3:+5598022 None:intergenic
ACACAAACATGTTCAACCAT+GGG 0.614296 1_3:+5603081 None:intergenic
AATTTGAATTACCATATCTG+GGG 0.615221 1_3:+5605291 None:intergenic
GAAAGTCTGACCACTGACAC+CGG 0.615663 1_3:+5605480 None:intergenic
ACTTACTTGCTTCGCAACAG+TGG 0.615748 1_3:+5602975 None:intergenic
TGTCCTCGACATGCGAGCCA+CGG 0.617094 1_3:-5605671 Msa0099430:CDS
GGTAACGGTCACTCCATCAA+CGG 0.617798 1_3:-5605718 Msa0099430:CDS
GGTTTGAGAAGCAAGTGAAG+TGG 0.619946 1_3:+5606067 None:intergenic
TGTAAGGGCGGAGTACGGCG+AGG 0.621289 1_3:+5605809 None:intergenic
GGTTGGCCCACAATTCCGAT+GGG 0.621310 1_3:-5604905 Msa0099430:CDS
CAGGTGGGATGATAGACACT+CGG 0.631537 1_3:-5598116 Msa0099430:CDS
GAAGAGGATGCTAAAGCCAA+AGG 0.631830 1_3:-5603122 Msa0099430:CDS
TTTGCTACGTGTAAAGCGTG+TGG 0.637512 1_3:-5603144 Msa0099430:CDS
CAAGAAAATCCTCAAACATG+GGG 0.637785 1_3:-5603021 Msa0099430:CDS
CCAGGTGCAAGTATAGCCAA+TGG 0.641755 1_3:+5597854 None:intergenic
TTCTCCTGAGACGTGTAGTG+AGG 0.643513 1_3:+5597938 None:intergenic
TTGAAAAGGCTCCTCCGCCG+TGG 0.646401 1_3:+5605654 None:intergenic
CATCGGCGGTGGTGTAAGGG+CGG 0.651775 1_3:+5605797 None:intergenic
TTTACTAGCGATGGAATTAG+GGG 0.652593 1_3:+5605861 None:intergenic
GGTGGAACTTTATCTAACGC+CGG 0.664301 1_3:-5605499 Msa0099430:CDS
CATCAACGGCCAAGCCATGG+CGG 0.679836 1_3:-5605704 Msa0099430:CDS
CCTCGACATGCGAGCCACGG+CGG 0.681570 1_3:-5605668 Msa0099430:CDS
TTACGTGGAAGGGTTCGTTG+TGG 0.686031 1_3:-5604951 Msa0099430:CDS
CATTGGCTATACTTGCACCT+GGG 0.700682 1_3:-5597853 Msa0099430:CDS
TGGCTGGTGACACTACCAGA+AGG 0.701936 1_3:-5604986 Msa0099430:CDS
ATTAACTTCAGAAGATCGAG+CGG 0.709501 1_3:+5604793 None:intergenic
GTGACACTACCAGAAGGTGA+CGG 0.718693 1_3:-5604980 Msa0099430:CDS
TTGTGGGCCAACCATTACAA+GGG 0.722239 1_3:+5604915 None:intergenic
AACCACCACAAATTTAACAG+TGG 0.724117 1_3:-5605749 Msa0099430:CDS
AAACAACAACAAGATCGATG+GGG 0.732189 1_3:+5597717 None:intergenic
ACTATACTAAAGATGCAGAG+TGG 0.735948 1_3:-5605006 Msa0099430:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATAATTTAAAATTTTATT+AGG + chr1_3:5602982-5603001 None:intergenic 0.0%
!!! TTGTTATTATATATTGTATA+TGG - chr1_3:5598548-5598567 Msa0099430:intron 10.0%
!! AAAAGATTAAAAAAAACAAA+TGG + chr1_3:5598945-5598964 None:intergenic 10.0%
!! AATAAAATGCAATATATAAT+TGG - chr1_3:5599030-5599049 Msa0099430:intron 10.0%
!! CTTAACAAAATTAATAAATA+AGG - chr1_3:5599166-5599185 Msa0099430:intron 10.0%
!! AAAATTAATAAATAAGGATT+AGG - chr1_3:5599172-5599191 Msa0099430:intron 10.0%
!! AAATTAATAAATAAGGATTA+GGG - chr1_3:5599173-5599192 Msa0099430:intron 10.0%
!!! TTTTTTAGATAAAATTTGTT+AGG - chr1_3:5599375-5599394 Msa0099430:intron 10.0%
!! CTTAACAAAATTAATAAATA+AGG - chr1_3:5599166-5599185 Msa0099430:intron 10.0%
!!! TTCTAAAAAAAAAAAAATCA+TGG + chr1_3:5599769-5599788 None:intergenic 10.0%
!!! TTTTTTTTTTTAGAAAACAT+TGG - chr1_3:5599774-5599793 Msa0099430:intron 10.0%
!!! TTTTTAATACTTGAAAATTT+AGG - chr1_3:5600793-5600812 Msa0099430:intron 10.0%
!!! AATAAGTTATTTTGAAAAAA+GGG + chr1_3:5602289-5602308 None:intergenic 10.0%
!!! AATAAGTTATTTTGAAAAAA+GGG + chr1_3:5602289-5602308 None:intergenic 10.0%
!! ATAAAAAATACTATACATAT+AGG + chr1_3:5603533-5603552 None:intergenic 10.0%
!!! AGAAAATATTTTAAAACATT+TGG + chr1_3:5604201-5604220 None:intergenic 10.0%
!!! TTTTAAAATATTTTCTTGTT+AGG - chr1_3:5604205-5604224 Msa0099430:intron 10.0%
!!! TTTAAAATATTTTCTTGTTA+GGG - chr1_3:5604206-5604225 Msa0099430:intron 10.0%
!! AATTGATTGATTAATAATTA+AGG - chr1_3:5605512-5605531 Msa0099430:CDS 10.0%
!! CTAATTAATATTATTTAAGT+TGG + chr1_3:5605864-5605883 None:intergenic 10.0%
!!! AAAAATATTGATTTACAATA+TGG + chr1_3:5606014-5606033 None:intergenic 10.0%
!!! ATATTGTAAATCAATATTTT+TGG - chr1_3:5606013-5606032 Msa0099430:five_prime_UTR 10.0%
!!! TATTGTAAATCAATATTTTT+GGG - chr1_3:5606014-5606033 Msa0099430:five_prime_UTR 10.0%
!!! TTTGATTTTGATTTTGATTT+TGG - chr1_3:5598590-5598609 Msa0099430:intron 15.0%
!!! TTGATTTTGATTTTGATTTT+GGG - chr1_3:5598591-5598610 Msa0099430:intron 15.0%
!! ATTTGCTTCAAAAAAAAAAA+AGG - chr1_3:5599204-5599223 Msa0099430:intron 15.0%
!! TGCTTCAAAAAAAATAAAAA+AGG - chr1_3:5599319-5599338 Msa0099430:intron 15.0%
!!! ATTTTTAACTTCAACTTAAT+TGG + chr1_3:5599804-5599823 None:intergenic 15.0%
!! TATTAAAAATTATGAGACAA+TGG + chr1_3:5600782-5600801 None:intergenic 15.0%
!!! TAAATAAGTTGTTTTGAAAA+AGG + chr1_3:5601352-5601371 None:intergenic 15.0%
!!! TGAAAAATTTGTTTTGAAAA+AGG + chr1_3:5601458-5601477 None:intergenic 15.0%
!! TTCAAAATAACTTATTCAAA+AGG - chr1_3:5601580-5601599 Msa0099430:intron 15.0%
!! TCAAAATAACTTATTCAAAA+GGG - chr1_3:5601581-5601600 Msa0099430:intron 15.0%
!! TCAAAATAACTTATTCAAAA+AGG - chr1_3:5601581-5601600 Msa0099430:intron 15.0%
!!! TGAAAAATTTGTTTTGAAAA+AGG + chr1_3:5601458-5601477 None:intergenic 15.0%
!!! GAATAAGTTATTTTGAAAAA+AGG + chr1_3:5602288-5602307 None:intergenic 15.0%
!!! GAATAAGTTATTTTGAAAAA+AGG + chr1_3:5602288-5602307 None:intergenic 15.0%
!!! TGAATAAGTTATTTTGAAAA+AGG - chr1_3:5602287-5602306 Msa0099430:intron 15.0%
!!! TGAATAAGTTATTTTGAAAA+AGG - chr1_3:5602287-5602306 Msa0099430:intron 15.0%
!! TTTATGAAAAACAACTTATT+AGG + chr1_3:5602860-5602879 None:intergenic 15.0%
!! AAAAAATGCTAAAAAAATCA+GGG + chr1_3:5603580-5603599 None:intergenic 15.0%
!! AAAAAAATGCTAAAAAAATC+AGG + chr1_3:5603581-5603600 None:intergenic 15.0%
!!! ATTGATTGTTGATATTTTAT+AGG - chr1_3:5603647-5603666 Msa0099430:intron 15.0%
!!! TTAAAATATTTTCTTGTTAG+GGG - chr1_3:5604207-5604226 Msa0099430:intron 15.0%
!!! TTAAATGCACAAAATTTTAT+AGG - chr1_3:5604418-5604437 Msa0099430:intron 15.0%
!!! CTAAATGATTTTTAAACATT+GGG + chr1_3:5604486-5604505 None:intergenic 15.0%
!!! ACTAAATGATTTTTAAACAT+TGG + chr1_3:5604487-5604506 None:intergenic 15.0%
!! AACTTTGTAATTATCTTAAT+TGG + chr1_3:5605269-5605288 None:intergenic 15.0%
!! AATATGAAAACAAAATTACA+AGG + chr1_3:5605928-5605947 None:intergenic 15.0%
!!! ATTGTAAATCAATATTTTTG+GGG - chr1_3:5606015-5606034 Msa0099430:five_prime_UTR 15.0%
!! TAATTTGAATTACCATATCT+GGG + chr1_3:5598384-5598403 None:intergenic 20.0%
!! ATAATTTGAATTACCATATC+TGG + chr1_3:5598385-5598404 None:intergenic 20.0%
!!! TGATTTTGATTTTGATTTTG+GGG - chr1_3:5598592-5598611 Msa0099430:intron 20.0%
!! AAAAAAATAAAAAAGGCAAG+AGG - chr1_3:5599326-5599345 Msa0099430:intron 20.0%
!! AAAAATGAAACCATTATTAG+TGG - chr1_3:5599818-5599837 Msa0099430:intron 20.0%
!!! GTATATTTGACTTTTTACTT+GGG + chr1_3:5599867-5599886 None:intergenic 20.0%
!!! TGTATATTTGACTTTTTACT+TGG + chr1_3:5599868-5599887 None:intergenic 20.0%
!!! TTGAATTTTTTTTTTGCCAA+TGG - chr1_3:5600026-5600045 Msa0099430:intron 20.0%
!! ATTGAATTTGAATTCCTTTA+TGG - chr1_3:5600207-5600226 Msa0099430:intron 20.0%
!!! ATATATTTTTTTACCGTGAA+AGG - chr1_3:5600863-5600882 Msa0099430:intron 20.0%
!!! TATATTTTTTTACCGTGAAA+GGG - chr1_3:5600864-5600883 Msa0099430:intron 20.0%
!!! AATTTTATAAATGCGTTAGT+TGG - chr1_3:5600908-5600927 Msa0099430:intron 20.0%
!!! ATTTTATAAATGCGTTAGTT+GGG - chr1_3:5600909-5600928 Msa0099430:intron 20.0%
!!! AAAACCACTTTAAAAAAAAC+TGG - chr1_3:5601173-5601192 Msa0099430:intron 20.0%
!!! TAAACCAGTTTTTTTTAAAG+TGG + chr1_3:5601180-5601199 None:intergenic 20.0%
!! AATAAACAATGACTAAAATC+CGG + chr1_3:5601322-5601341 None:intergenic 20.0%
!!! GATTTTAGTCATTGTTTATT+AGG - chr1_3:5601322-5601341 Msa0099430:intron 20.0%
!!! TGAATAAGTTATTTCGAAAA+AGG + chr1_3:5601398-5601417 None:intergenic 20.0%
!!! TGAATAAGTTATTTCGAAAA+AGG + chr1_3:5601398-5601417 None:intergenic 20.0%
!! TTTATGTAAAACGACTTATT+AGG + chr1_3:5602379-5602398 None:intergenic 20.0%
!! TTTATACAAAACAGCTTATT+AGG + chr1_3:5602922-5602941 None:intergenic 20.0%
!!! ATAAGCAGTTTTTGAAAAAA+AGG - chr1_3:5602955-5602974 Msa0099430:intron 20.0%
!!! GAAAGTGTACTAAAAAAATA+TGG - chr1_3:5603052-5603071 Msa0099430:CDS 20.0%
!! ATGGTTCAAATATATTAAAC+TGG - chr1_3:5603071-5603090 Msa0099430:CDS 20.0%
!!! ATTCAGTTCAATTTTAAAAC+CGG + chr1_3:5603104-5603123 None:intergenic 20.0%
!!! CTGAATTGTTTTTGAATTTA+TGG - chr1_3:5603118-5603137 Msa0099430:CDS 20.0%
!! TAAAAAAATCAGGGAATTAA+GGG + chr1_3:5603571-5603590 None:intergenic 20.0%
!!! ATTTTTTGGTAACACTTTTT+AGG + chr1_3:5603708-5603727 None:intergenic 20.0%
!!! GTGAAAATCTTACTTTTTTA+GGG + chr1_3:5603733-5603752 None:intergenic 20.0%
!!! AGTGAAAATCTTACTTTTTT+AGG + chr1_3:5603734-5603753 None:intergenic 20.0%
!! AGATAGATAAAGTTGAAAAA+GGG + chr1_3:5604078-5604097 None:intergenic 20.0%
!! AAGATAGATAAAGTTGAAAA+AGG + chr1_3:5604079-5604098 None:intergenic 20.0%
!! TTCTGTTAGTTAAATGTTTA+AGG - chr1_3:5604294-5604313 Msa0099430:intron 20.0%
!! TCTGTTAGTTAAATGTTTAA+GGG - chr1_3:5604295-5604314 Msa0099430:intron 20.0%
!!! TTTTGTATTTTCTCTTGAAA+TGG - chr1_3:5604666-5604685 Msa0099430:intron 20.0%
!!! TTTGTATTTTCTCTTGAAAT+GGG - chr1_3:5604667-5604686 Msa0099430:intron 20.0%
!! AATGTTCTAATAATGTAGAT+GGG + chr1_3:5604887-5604906 None:intergenic 20.0%
!! ACTTACTAATAAAGGATAAA+GGG + chr1_3:5605087-5605106 None:intergenic 20.0%
!! TACTTACTAATAAAGGATAA+AGG + chr1_3:5605088-5605107 None:intergenic 20.0%
!! TGAATACTACTTACTAATAA+AGG + chr1_3:5605095-5605114 None:intergenic 20.0%
!!! ACTTACTTTTCATCATTTTA+AGG + chr1_3:5605366-5605385 None:intergenic 20.0%
!!! TGTTGTTTTTATGATTAATC+AGG - chr1_3:5605536-5605555 Msa0099430:CDS 20.0%
!!! AAAACAAAATTTTGATCCAT+TGG - chr1_3:5605801-5605820 Msa0099430:CDS 20.0%
!!! ATATTATTTAAGTTGGTTTC+TGG + chr1_3:5605857-5605876 None:intergenic 20.0%
!!! TTGTAAATCAATATTTTTGG+GGG - chr1_3:5606016-5606035 Msa0099430:five_prime_UTR 20.0%
!! GTTTTATGTTTGAAGAGTTT+GGG + chr1_3:5597628-5597647 None:intergenic 25.0%
!!! TTCGGTTTTTTCAGTTAAAA+GGG + chr1_3:5597664-5597683 None:intergenic 25.0%
!!! TTTCGGTTTTTTCAGTTAAA+AGG + chr1_3:5597665-5597684 None:intergenic 25.0%
! AATTTGAATTACCATATCTG+GGG + chr1_3:5598383-5598402 None:intergenic 25.0%
! CAAGTAAGTTTAAATGAGTT+GGG - chr1_3:5598488-5598507 Msa0099430:intron 25.0%
!! ATATGGAGTAGTTTATGTTT+TGG - chr1_3:5598565-5598584 Msa0099430:intron 25.0%
!!! ATTTTGGGGTGATTAATTAT+AGG - chr1_3:5598606-5598625 Msa0099430:intron 25.0%
! TTAATAAATAAGGATTAGGG+TGG - chr1_3:5599176-5599195 Msa0099430:intron 25.0%
! TCAAAAAAAAAAAAGGCAAG+AGG - chr1_3:5599211-5599230 Msa0099430:intron 25.0%
!!! TTTTTTTAGATGGAAGTTGT+TGG - chr1_3:5599259-5599278 Msa0099430:intron 25.0%
!!! TTTTTTAGATGGAAGTTGTT+GGG - chr1_3:5599260-5599279 Msa0099430:intron 25.0%
!! ATTTTCGTGTTCTAGTATAT+GGG - chr1_3:5599497-5599516 Msa0099430:intron 25.0%
! ACTAATCAAACATAATATGC+CGG + chr1_3:5599605-5599624 None:intergenic 25.0%
!! TGTTTTTCTACCACTAATAA+TGG + chr1_3:5599831-5599850 None:intergenic 25.0%
! AGTGGTAGAAAAACAAATAT+AGG - chr1_3:5599836-5599855 Msa0099430:intron 25.0%
! GTAGAAAAACAAATATAGGT+GGG - chr1_3:5599840-5599859 Msa0099430:intron 25.0%
!!! ATTTTTTTTTTGCCAATGGT+TGG - chr1_3:5600030-5600049 Msa0099430:intron 25.0%
!!! TTTTTTTTTTGCCAATGGTT+GGG - chr1_3:5600031-5600050 Msa0099430:intron 25.0%
!! CTATTTTATGCTAATAGCTA+AGG + chr1_3:5600183-5600202 None:intergenic 25.0%
! TTTGAATTCCTTTATGGTTA+AGG - chr1_3:5600213-5600232 Msa0099430:intron 25.0%
!!! CATTTTAACCTTAACCATAA+AGG + chr1_3:5600224-5600243 None:intergenic 25.0%
! CTTTATGGTTAAGGTTAAAA+TGG - chr1_3:5600222-5600241 Msa0099430:intron 25.0%
! TATCACTATGTTACATAGAA+AGG - chr1_3:5600744-5600763 Msa0099430:intron 25.0%
!! ATTTTATCATGATTATGACG+AGG - chr1_3:5600976-5600995 Msa0099430:intron 25.0%
! TTTACGTAAAACAGCTTATT+AGG - chr1_3:5601368-5601387 Msa0099430:intron 25.0%
! TTTACGTAAAACAGCTTATT+AGG - chr1_3:5601368-5601387 Msa0099430:intron 25.0%
! TTTATGCAAAACAGCTTATT+AGG - chr1_3:5601488-5601507 Msa0099430:intron 25.0%
! TTTACGTAAAACAGCTTATT+AGG - chr1_3:5601368-5601387 Msa0099430:intron 25.0%
! ATTTATGCAAAACAGCTTAT+TGG - chr1_3:5601487-5601506 Msa0099430:intron 25.0%
! TTTATGCAAAACAGCTTATT+GGG - chr1_3:5601488-5601507 Msa0099430:intron 25.0%
! TTTATGCAAAACAGCTTATT+AGG - chr1_3:5601488-5601507 Msa0099430:intron 25.0%
! TTTATGCAAAACGACTTATT+AGG - chr1_3:5601908-5601927 Msa0099430:intron 25.0%
! TTTATGCAAAACGACATATT+AGG - chr1_3:5601954-5601973 Msa0099430:intron 25.0%
! TTTATGCAAAACAGCTTATT+AGG - chr1_3:5601488-5601507 Msa0099430:intron 25.0%
! TTTATGCAAAACGACTTATT+AGG - chr1_3:5601908-5601927 Msa0099430:intron 25.0%
! TTTATGCAAAACAGCTTATT+AGG - chr1_3:5601488-5601507 Msa0099430:intron 25.0%
! TTTACACAAAACAGCTTATT+AGG + chr1_3:5602317-5602336 None:intergenic 25.0%
! TTTACGCAAAATAGCTTATT+AGG + chr1_3:5602559-5602578 None:intergenic 25.0%
! AACAGCTTATTTACGTAAAA+CGG + chr1_3:5602628-5602647 None:intergenic 25.0%
! TTTACGCAAAATAGCTTATT+AGG + chr1_3:5602559-5602578 None:intergenic 25.0%
!! AATAAGTTGTTTCGAATAAG+CGG - chr1_3:5602878-5602897 Msa0099430:intron 25.0%
! CAGTTCATAAACCATTTAAA+TGG - chr1_3:5603143-5603162 Msa0099430:CDS 25.0%
! AAAAAACTGCACCATTTAAA+TGG + chr1_3:5603157-5603176 None:intergenic 25.0%
!!! TTAAATGGTGCAGTTTTTTT+TGG - chr1_3:5603158-5603177 Msa0099430:CDS 25.0%
!! ATTCATATATTTTGCAACCA+AGG + chr1_3:5603263-5603282 None:intergenic 25.0%
! AAAGGTTAATAAGCCAAAAT+GGG - chr1_3:5603398-5603417 Msa0099430:intron 25.0%
! CTAAAAAAATCAGGGAATTA+AGG + chr1_3:5603572-5603591 None:intergenic 25.0%
!!! TAAAACGAGTAGTTTTGTAA+TGG - chr1_3:5603616-5603635 Msa0099430:intron 25.0%
!!! ACTTTTTTAGGGCAATTTTT+TGG + chr1_3:5603722-5603741 None:intergenic 25.0%
! TGAGAAAAAACAGATAGAAA+AGG + chr1_3:5603792-5603811 None:intergenic 25.0%
! GATAGATAAAGTTGAAAAAG+GGG + chr1_3:5604077-5604096 None:intergenic 25.0%
!! TATAGGAAGTTTCTTCTTTT+AGG - chr1_3:5604435-5604454 Msa0099430:intron 25.0%
! TTCAAGAGAAAATACAAAAC+CGG + chr1_3:5604665-5604684 None:intergenic 25.0%
!!! TTTTTCTAAGGATTGGAATT+TGG - chr1_3:5604759-5604778 Msa0099430:intron 25.0%
! ATGTTCTAATAATGTAGATG+GGG + chr1_3:5604886-5604905 None:intergenic 25.0%
! CAATGTTCTAATAATGTAGA+TGG + chr1_3:5604888-5604907 None:intergenic 25.0%
! CTTACTAATAAAGGATAAAG+GGG + chr1_3:5605086-5605105 None:intergenic 25.0%
! AGGAACATAATGAAATAGTA+AGG + chr1_3:5605346-5605365 None:intergenic 25.0%
!!! AGTATGACTTATTTTACTCT+AGG - chr1_3:5605388-5605407 Msa0099430:CDS 25.0%
!! TGATTTCACAAATTTCTAGA+GGG + chr1_3:5605438-5605457 None:intergenic 25.0%
!! TTGATTTCACAAATTTCTAG+AGG + chr1_3:5605439-5605458 None:intergenic 25.0%
! AGAATTGCAATCACAATTTA+GGG + chr1_3:5605492-5605511 None:intergenic 25.0%
! TAGAATTGCAATCACAATTT+AGG + chr1_3:5605493-5605512 None:intergenic 25.0%
!!! TGTTTTTATGATTAATCAGG+TGG - chr1_3:5605539-5605558 Msa0099430:CDS 25.0%
!! GTTTTTATGATTAATCAGGT+GGG - chr1_3:5605540-5605559 Msa0099430:CDS 25.0%
!!! GATCAAAATTTTGTTTTCTC+TGG + chr1_3:5605798-5605817 None:intergenic 25.0%
! TTTATATATAGGATACGCAA+AGG + chr1_3:5606064-5606083 None:intergenic 25.0%
! CGTTTTATGTTTGAAGAGTT+TGG + chr1_3:5597629-5597648 None:intergenic 30.0%
TGTGAAATGAAGAAGAGTTT+CGG + chr1_3:5597682-5597701 None:intergenic 30.0%
GTAAGCTATCATGTTTGTTT+GGG + chr1_3:5597708-5597727 None:intergenic 30.0%
GCAAGTAAGTTTAAATGAGT+TGG - chr1_3:5598487-5598506 Msa0099430:intron 30.0%
ACAAAGATTTGACATATGTC+CGG + chr1_3:5598532-5598551 None:intergenic 30.0%
!! TCGATCTTCTGAAGTTAATA+CGG - chr1_3:5598882-5598901 Msa0099430:intron 30.0%
TTCTTTACAATAAACCCGAA+CGG + chr1_3:5598996-5599015 None:intergenic 30.0%
AAAAAAAAAGGCAAGAGGAT+AGG - chr1_3:5599216-5599235 Msa0099430:intron 30.0%
CAAGAGGATAGGAATAAAAT+TGG - chr1_3:5599227-5599246 Msa0099430:intron 30.0%
!!! GTGTCATGCATTTTTTTAGA+TGG - chr1_3:5599249-5599268 Msa0099430:intron 30.0%
! AAACCTAATTTGCAAATGAG+CGG - chr1_3:5599410-5599429 Msa0099430:intron 30.0%
CAAATGAGCGGAAAAATATT+AGG - chr1_3:5599422-5599441 Msa0099430:intron 30.0%
CATATACTAGAACACGAAAA+TGG + chr1_3:5599498-5599517 None:intergenic 30.0%
! CATTTTCGTGTTCTAGTATA+TGG - chr1_3:5599496-5599515 Msa0099430:intron 30.0%
CTAGTATATGGGAATTGTAA+AGG - chr1_3:5599508-5599527 Msa0099430:intron 30.0%
! TAATATTGATTGACCTAGCT+TGG - chr1_3:5599743-5599762 Msa0099430:intron 30.0%
GGTAGAAAAACAAATATAGG+TGG - chr1_3:5599839-5599858 Msa0099430:intron 30.0%
AGATAACGTCACATATCATT+TGG - chr1_3:5599952-5599971 Msa0099430:intron 30.0%
GATAACGTCACATATCATTT+GGG - chr1_3:5599953-5599972 Msa0099430:intron 30.0%
TATCATTTGGGTATAAGTGT+TGG - chr1_3:5599965-5599984 Msa0099430:intron 30.0%
!!! TTTTTTTTTGCCAATGGTTG+GGG - chr1_3:5600032-5600051 Msa0099430:intron 30.0%
TAATGTGTCAGAAAATCCAA+TGG + chr1_3:5600089-5600108 None:intergenic 30.0%
TACTAAAAAGCTTGTGTTGT+TGG - chr1_3:5600114-5600133 Msa0099430:intron 30.0%
ATCTCAATAATCAGAGCAAA+TGG + chr1_3:5600271-5600290 None:intergenic 30.0%
!!! TCCAGAAAATGATGGTTTTT+TGG + chr1_3:5600331-5600350 None:intergenic 30.0%
CCACTTTCTACAATATATCA+AGG + chr1_3:5600437-5600456 None:intergenic 30.0%
CCTTGATATATTGTAGAAAG+TGG - chr1_3:5600434-5600453 Msa0099430:intron 30.0%
TGTTGAGGGAATAAAATTTG+AGG - chr1_3:5600482-5600501 Msa0099430:intron 30.0%
TTCAAGAAAATCCTCAAACA+TGG - chr1_3:5600648-5600667 Msa0099430:intron 30.0%
TCAAGAAAATCCTCAAACAT+GGG - chr1_3:5600649-5600668 Msa0099430:intron 30.0%
CTGAATTGTATCCATTAATG+TGG + chr1_3:5601148-5601167 None:intergenic 30.0%
! ACTGGTTTAAAACTGTAAAC+CGG + chr1_3:5601264-5601283 None:intergenic 30.0%
! GAATAATCTGGTTCAAAAAC+TGG + chr1_3:5601282-5601301 None:intergenic 30.0%
TTTACGTAAAACGGCTTATT+AGG + chr1_3:5602619-5602638 None:intergenic 30.0%
!!! GTTCAATTTTAAAACCGGTT+CGG + chr1_3:5603099-5603118 None:intergenic 30.0%
GAAAGGTTAATAAGCCAAAA+TGG - chr1_3:5603397-5603416 Msa0099430:intron 30.0%
CAATAGATGGTGAAGTATAT+GGG + chr1_3:5603433-5603452 None:intergenic 30.0%
! AAGGAGTGATAGTGAATAAT+AGG + chr1_3:5603883-5603902 None:intergenic 30.0%
!! GTGCAATTAGCTTTGTTATA+TGG + chr1_3:5603962-5603981 None:intergenic 30.0%
CAACGTCAATTTGAAAATTC+CGG - chr1_3:5604113-5604132 Msa0099430:intron 30.0%
! AATATTTTCTTGTTAGGGGA+AGG - chr1_3:5604211-5604230 Msa0099430:intron 30.0%
GAAGGAAATCTATAGTAATC+AGG - chr1_3:5604229-5604248 Msa0099430:intron 30.0%
!! TTTTCCAGAGAGTTTGTTTT+TGG - chr1_3:5604253-5604272 Msa0099430:intron 30.0%
!! ATCATTAACTTGTGTCTTGA+GGG + chr1_3:5604335-5604354 None:intergenic 30.0%
!! AATCATTAACTTGTGTCTTG+AGG + chr1_3:5604336-5604355 None:intergenic 30.0%
TTAAACATTGGGTAGTGTTA+GGG + chr1_3:5604475-5604494 None:intergenic 30.0%
TTTAAACATTGGGTAGTGTT+AGG + chr1_3:5604476-5604495 None:intergenic 30.0%
AAGGATTACTCACTACTAAA+AGG + chr1_3:5604520-5604539 None:intergenic 30.0%
ATATCCTTGTCCATTCTTAT+TGG + chr1_3:5604614-5604633 None:intergenic 30.0%
TCAAGAGAAAATACAAAACC+GGG + chr1_3:5604664-5604683 None:intergenic 30.0%
CAAAAATAAAATCTCCCTTG+TGG - chr1_3:5604707-5604726 Msa0099430:intron 30.0%
!!! TATTGATGCTGCTTTTTCTA+AGG - chr1_3:5604747-5604766 Msa0099430:intron 30.0%
TGTTCTAATAATGTAGATGG+GGG + chr1_3:5604885-5604904 None:intergenic 30.0%
GAATATTATGTAGGAGGTTA+TGG + chr1_3:5604928-5604947 None:intergenic 30.0%
ACACTGAAGGAATATTATGT+AGG + chr1_3:5604937-5604956 None:intergenic 30.0%
AAACCAATAATACTAGTAGC+AGG - chr1_3:5604965-5604984 Msa0099430:CDS 30.0%
ACATTAAAGGACTATTACGT+AGG + chr1_3:5605005-5605024 None:intergenic 30.0%
!! GGTTTGAGTTGATACATTAA+AGG + chr1_3:5605018-5605037 None:intergenic 30.0%
!!! ATGACTTATTTTACTCTAGG+TGG - chr1_3:5605391-5605410 Msa0099430:CDS 30.0%
! TTCTAGAGGGAAAATAAAAC+AGG + chr1_3:5605425-5605444 None:intergenic 30.0%
TATTCAATTGTGCTACAACA+AGG - chr1_3:5605687-5605706 Msa0099430:CDS 30.0%
ATTCAATTGTGCTACAACAA+GGG - chr1_3:5605688-5605707 Msa0099430:CDS 30.0%
AACCATTGTAGTAATTGGTT+GGG + chr1_3:5605985-5606004 None:intergenic 30.0%
TGATGAACCATTGTAGTAAT+TGG + chr1_3:5605990-5606009 None:intergenic 30.0%
TTCAGTTAAAAGGGAAGCTA+CGG + chr1_3:5597655-5597674 None:intergenic 35.0%
GGTAAGCTATCATGTTTGTT+TGG + chr1_3:5597709-5597728 None:intergenic 35.0%
TTTACTAGCGATGGAATTAG+GGG + chr1_3:5597813-5597832 None:intergenic 35.0%
CTTTACTAGCGATGGAATTA+GGG + chr1_3:5597814-5597833 None:intergenic 35.0%
TCTTTACTAGCGATGGAATT+AGG + chr1_3:5597815-5597834 None:intergenic 35.0%
! TTTTACGGCTTTTACCACAT+CGG + chr1_3:5597894-5597913 None:intergenic 35.0%
AACCACCACAAATTTAACAG+TGG - chr1_3:5597922-5597941 Msa0099430:CDS 35.0%
TTGGAAGTTGTTACTGGTAA+AGG - chr1_3:5598247-5598266 Msa0099430:intron 35.0%
GTGATTAATTATAGGTGAGG+TGG - chr1_3:5598614-5598633 Msa0099430:intron 35.0%
ACTATACTAAAGATGCAGAG+TGG - chr1_3:5598665-5598684 Msa0099430:intron 35.0%
! AAAATTTGGTTCGAACCCAT+CGG + chr1_3:5598784-5598803 None:intergenic 35.0%
! TTCGAACCAAATTTTCAACC+CGG - chr1_3:5598789-5598808 Msa0099430:intron 35.0%
ATTAACTTCAGAAGATCGAG+CGG + chr1_3:5598881-5598900 None:intergenic 35.0%
TTTCCGCTCATTTGCAAATT+AGG + chr1_3:5599416-5599435 None:intergenic 35.0%
TCAGGCATAGAAAACATGTT+TGG - chr1_3:5599541-5599560 Msa0099430:intron 35.0%
! TCCGAAATTTTACATGACAC+CGG - chr1_3:5599583-5599602 Msa0099430:intron 35.0%
ACGACACTAACTTAGACATA+CGG + chr1_3:5599654-5599673 None:intergenic 35.0%
AAAAAAATCATGGCCAAGCT+AGG + chr1_3:5599759-5599778 None:intergenic 35.0%
ACATGTACGAAGTTGAGATA+TGG - chr1_3:5599887-5599906 Msa0099430:intron 35.0%
!!! TTGGGTATAAGTGTTGGTTT+TGG - chr1_3:5599971-5599990 Msa0099430:intron 35.0%
!!! TTTTTTTTGCCAATGGTTGG+GGG - chr1_3:5600033-5600052 Msa0099430:intron 35.0%
! GCAAAGTACAGTGTCTTATT+CGG + chr1_3:5600150-5600169 None:intergenic 35.0%
!!! GATGGTTTTTTGGCCATTTA+CGG + chr1_3:5600321-5600340 None:intergenic 35.0%
! GCCAAAAAACCATCATTTTC+TGG - chr1_3:5600327-5600346 Msa0099430:intron 35.0%
CTACAGATTCCAGAAAATGA+TGG + chr1_3:5600339-5600358 None:intergenic 35.0%
TAGAAAGTGGATAGATTGCT+TGG - chr1_3:5600447-5600466 Msa0099430:intron 35.0%
! ATGCTAAAGCCAAAGGTATA+TGG - chr1_3:5600556-5600575 Msa0099430:intron 35.0%
! TGCTAAAGCCAAAGGTATAT+GGG - chr1_3:5600557-5600576 Msa0099430:intron 35.0%
ACACAAACATGTTCAACCAT+GGG + chr1_3:5600593-5600612 None:intergenic 35.0%
ACGATCAAAATCAGCAATGT+CGG + chr1_3:5600622-5600641 None:intergenic 35.0%
CAAGAAAATCCTCAAACATG+GGG - chr1_3:5600650-5600669 Msa0099430:intron 35.0%
!!! TTTTTTTACCGTGAAAGGGA+AGG - chr1_3:5600868-5600887 Msa0099430:intron 35.0%
TATAAATGCGTTAGTTGGGT+TGG - chr1_3:5600913-5600932 Msa0099430:intron 35.0%
!! GATTTTGACATGAACTGCTA+AGG - chr1_3:5600942-5600961 Msa0099430:intron 35.0%
TAAAAACTAGCTACCACTAG+TGG - chr1_3:5601008-5601027 Msa0099430:intron 35.0%
TGTTCATATGTTACCACTAG+TGG + chr1_3:5601024-5601043 None:intergenic 35.0%
CACATAAAGCAAGAGAGATA+TGG - chr1_3:5601061-5601080 Msa0099430:intron 35.0%
AAGAGAGATATGGACCAAAA+GGG - chr1_3:5601071-5601090 Msa0099430:intron 35.0%
!! TTCATGGTTCTAAACTGCAT+TGG - chr1_3:5601115-5601134 Msa0099430:intron 35.0%
TTGGAACTGAACCACATTAA+TGG - chr1_3:5601134-5601153 Msa0099430:intron 35.0%
! TTTTCAAACCAGTTCCAGTT+CGG - chr1_3:5601201-5601220 Msa0099430:intron 35.0%
! GTTTAAAACCAGTTCAGAAC+CGG - chr1_3:5601223-5601242 Msa0099430:intron 35.0%
!! TAAATAAACCGGTTCTGAAC+TGG + chr1_3:5601234-5601253 None:intergenic 35.0%
! CCGGTTCGAAATAAATAAAC+CGG + chr1_3:5601245-5601264 None:intergenic 35.0%
CCGGTTTATTTATTTCGAAC+CGG - chr1_3:5601242-5601261 Msa0099430:intron 35.0%
AAACCAGTTCGAGAATAATC+TGG + chr1_3:5601294-5601313 None:intergenic 35.0%
!!! TCTCGAACTGGTTTTTAAAC+CGG - chr1_3:5601300-5601319 Msa0099430:intron 35.0%
! ATATTAAACTGGTTCCGAAC+CGG - chr1_3:5603082-5603101 Msa0099430:CDS 35.0%
!!! CAGTTTTTTTTGGTCCAGTT+TGG - chr1_3:5603168-5603187 Msa0099430:CDS 35.0%
ATCCATAAACTGAACCAAAC+TGG + chr1_3:5603185-5603204 None:intergenic 35.0%
!! TTTCACCCTAATTTGCTTCA+AGG - chr1_3:5603302-5603321 Msa0099430:intron 35.0%
! CAAGGACCACCAATTTTAAA+CGG - chr1_3:5603320-5603339 Msa0099430:intron 35.0%
! AAGGACCACCAATTTTAAAC+GGG - chr1_3:5603321-5603340 Msa0099430:intron 35.0%
TGGTGAAGTATATGGGAAAT+GGG + chr1_3:5603426-5603445 None:intergenic 35.0%
ATGGTGAAGTATATGGGAAA+TGG + chr1_3:5603427-5603446 None:intergenic 35.0%
CCAATAGATGGTGAAGTATA+TGG + chr1_3:5603434-5603453 None:intergenic 35.0%
CCATATACTTCACCATCTAT+TGG - chr1_3:5603431-5603450 Msa0099430:intron 35.0%
CAGGGAATTAAGGGAAAAAT+TGG + chr1_3:5603562-5603581 None:intergenic 35.0%
GATCGATGAAAACGAGATAT+TGG - chr1_3:5604543-5604562 Msa0099430:intron 35.0%
TTCCAACAACGTATCTTTCA+TGG - chr1_3:5604579-5604598 Msa0099430:intron 35.0%
! GTCAGTTTTGCCAATAAGAA+TGG - chr1_3:5604601-5604620 Msa0099430:intron 35.0%
TTTGCCAATAAGAATGGACA+AGG - chr1_3:5604607-5604626 Msa0099430:intron 35.0%
AAGGATATTTATTCGCCAAC+CGG - chr1_3:5604626-5604645 Msa0099430:intron 35.0%
!!! ATGCTGCTTTTTCTAAGGAT+TGG - chr1_3:5604752-5604771 Msa0099430:intron 35.0%
ACTTAAACCAGTTGCAGATT+GGG + chr1_3:5604825-5604844 None:intergenic 35.0%
AATGCATGTGGTCAATTCAT+GGG + chr1_3:5604857-5604876 None:intergenic 35.0%
TAATGCATGTGGTCAATTCA+TGG + chr1_3:5604858-5604877 None:intergenic 35.0%
GTTCTAATAATGTAGATGGG+GGG + chr1_3:5604884-5604903 None:intergenic 35.0%
CTGAAGGAATATTATGTAGG+AGG + chr1_3:5604934-5604953 None:intergenic 35.0%
GATCCTGCTACTAGTATTAT+TGG + chr1_3:5604971-5604990 None:intergenic 35.0%
TTAAAGGACTATTACGTAGG+AGG + chr1_3:5605002-5605021 None:intergenic 35.0%
TAATGAAAACGCCACATGAA+AGG - chr1_3:5605158-5605177 Msa0099430:intron 35.0%
TAAATTCTCTACGTCAACTG+TGG - chr1_3:5605199-5605218 Msa0099430:intron 35.0%
GGGAAAATAAAACAGGATCT+TGG + chr1_3:5605418-5605437 None:intergenic 35.0%
ATGTAGAAAATGTTGCTGTC+TGG + chr1_3:5605589-5605608 None:intergenic 35.0%
!!! CTGGAAAATATTTTTTGCCC+AGG + chr1_3:5605838-5605857 None:intergenic 35.0%
AAACAACAACAAGATCGATG+GGG + chr1_3:5605957-5605976 None:intergenic 35.0%
GAAACAACAACAAGATCGAT+GGG + chr1_3:5605958-5605977 None:intergenic 35.0%
AGAAACAACAACAAGATCGA+TGG + chr1_3:5605959-5605978 None:intergenic 35.0%
ACCATTGTAGTAATTGGTTG+GGG + chr1_3:5605984-5606003 None:intergenic 35.0%
GAACCATTGTAGTAATTGGT+TGG + chr1_3:5605986-5606005 None:intergenic 35.0%
TACCTTGAACACTTCGTTCA+TGG - chr1_3:5597725-5597744 Msa0099430:three_prime_UTR 40.0%
! TTCCATGAACGAAGTGTTCA+AGG + chr1_3:5597730-5597749 None:intergenic 40.0%
TCCATCGCTAGTAAAGACTT+TGG - chr1_3:5597818-5597837 Msa0099430:exon 40.0%
ATCGCTAGTAAAGACTTTGG+CGG - chr1_3:5597821-5597840 Msa0099430:CDS 40.0%
CACCACAAATTTAACAGTGG+CGG - chr1_3:5597925-5597944 Msa0099430:CDS 40.0%
TCGACGTAGAGAAGTTGAAA+AGG + chr1_3:5598034-5598053 None:intergenic 40.0%
TTTCAACTTCTCTACGTCGA+CGG - chr1_3:5598034-5598053 Msa0099430:CDS 40.0%
!! CGAATTTTAAGCTTGTTCCG+AGG - chr1_3:5598119-5598138 Msa0099430:intron 40.0%
TTTCCGTTATGGTCCTCAAA+CGG - chr1_3:5598210-5598229 Msa0099430:intron 40.0%
ACGGAATTGGAAGTTGTTAC+TGG - chr1_3:5598241-5598260 Msa0099430:intron 40.0%
!!! GAGCTCTTTTTTGCTTCACT+TGG - chr1_3:5598304-5598323 Msa0099430:intron 40.0%
!!! CTCTTTTTTGCTTCACTTGG+TGG - chr1_3:5598307-5598326 Msa0099430:intron 40.0%
ACATTTGATATGCTCAGACG+CGG - chr1_3:5598441-5598460 Msa0099430:intron 40.0%
GGGGTGATTAATTATAGGTG+AGG - chr1_3:5598611-5598630 Msa0099430:intron 40.0%
AATTATAGGTGAGGTGGATG+AGG - chr1_3:5598620-5598639 Msa0099430:intron 40.0%
ATTATAGGTGAGGTGGATGA+GGG - chr1_3:5598621-5598640 Msa0099430:intron 40.0%
GGTGATTTACTCGGAATTTG+AGG - chr1_3:5598642-5598661 Msa0099430:intron 40.0%
TAATCAAAACCGTCACCTTC+TGG + chr1_3:5598703-5598722 None:intergenic 40.0%
!!! ACGGTTTTGATTACGTGGAA+GGG - chr1_3:5598710-5598729 Msa0099430:intron 40.0%
AACAATGACGACCCTTGTAA+TGG - chr1_3:5598745-5598764 Msa0099430:intron 40.0%
! GACAAACCGGGTTGAAAATT+TGG + chr1_3:5598798-5598817 None:intergenic 40.0%
!! AGCTCTAAGCAATAGAGAAC+CGG + chr1_3:5598838-5598857 None:intergenic 40.0%
!! GCCGGTGTCATGTAAAATTT+CGG + chr1_3:5599587-5599606 None:intergenic 40.0%
ACGAAGTTGAGATATGGAAG+AGG - chr1_3:5599893-5599912 Msa0099430:intron 40.0%
GGTCGTAATGTATCTTCCAT+TGG - chr1_3:5600070-5600089 Msa0099430:intron 40.0%
! TTGAGATCTTGCTGACGTTT+TGG - chr1_3:5600284-5600303 Msa0099430:intron 40.0%
AAAGTGGATAGATTGCTTGG+AGG - chr1_3:5600450-5600469 Msa0099430:intron 40.0%
AAGTGGATAGATTGCTTGGA+GGG - chr1_3:5600451-5600470 Msa0099430:intron 40.0%
TGAGGATGATGTGAAGTACA+TGG - chr1_3:5600500-5600519 Msa0099430:intron 40.0%
GACACAAACATGTTCAACCA+TGG + chr1_3:5600594-5600613 None:intergenic 40.0%
AAAATCAGCAATGTCGGTCT+TGG + chr1_3:5600616-5600635 None:intergenic 40.0%
AAAATCCTCAAACATGGGGT+TGG - chr1_3:5600654-5600673 Msa0099430:intron 40.0%
AACAGTGGGTACACTAGAAT+GGG + chr1_3:5600684-5600703 None:intergenic 40.0%
ATAGCTTTCCTTCCCTTTCA+CGG + chr1_3:5600879-5600898 None:intergenic 40.0%
TTGACATGAACTGCTAAGGT+TGG - chr1_3:5600946-5600965 Msa0099430:intron 40.0%
CAAGAGAGATATGGACCAAA+AGG - chr1_3:5601070-5601089 Msa0099430:intron 40.0%
AGAGAGATATGGACCAAAAG+GGG - chr1_3:5601072-5601091 Msa0099430:intron 40.0%
!! GTTTTAAACCGAACTGGAAC+TGG + chr1_3:5601212-5601231 None:intergenic 40.0%
!!! GAACTGGTTTTAAACCGAAC+TGG + chr1_3:5601218-5601237 None:intergenic 40.0%
GAACCAGATTATTCTCGAAC+TGG - chr1_3:5601288-5601307 Msa0099430:intron 40.0%
! GTCCAGTTTGGTTCAGTTTA+TGG - chr1_3:5603180-5603199 Msa0099430:CDS 40.0%
!!! ATTTTTTGCACACCCCTACT+AGG - chr1_3:5603222-5603241 Msa0099430:CDS 40.0%
ATTAGGGTGAAAGAGGCAAA+TGG + chr1_3:5603294-5603313 None:intergenic 40.0%
GAAGCAAATTAGGGTGAAAG+AGG + chr1_3:5603301-5603320 None:intergenic 40.0%
GTGGTCCTTGAAGCAAATTA+GGG + chr1_3:5603310-5603329 None:intergenic 40.0%
! AGGACCACCAATTTTAAACG+GGG - chr1_3:5603322-5603341 Msa0099430:intron 40.0%
! TTACCCACCCCGTTTAAAAT+TGG + chr1_3:5603332-5603351 None:intergenic 40.0%
GCACTTGTGTTGAACAAGAA+AGG - chr1_3:5603380-5603399 Msa0099430:intron 40.0%
GGTGAAGTATATGGGAAATG+GGG + chr1_3:5603425-5603444 None:intergenic 40.0%
TTCACCATCTATTGGTCGTA+TGG - chr1_3:5603439-5603458 Msa0099430:intron 40.0%
GTTACCATACGACCAATAGA+TGG + chr1_3:5603446-5603465 None:intergenic 40.0%
CCAACAAGCTGAGATAAAGA+AGG + chr1_3:5603498-5603517 None:intergenic 40.0%
CCTTCTTTATCTCAGCTTGT+TGG - chr1_3:5603495-5603514 Msa0099430:intron 40.0%
!! CTCAGCTTGTTGGTACTTTA+TGG - chr1_3:5603505-5603524 Msa0099430:intron 40.0%
TTGTTATATGGCTGTCCTAC+CGG + chr1_3:5603950-5603969 None:intergenic 40.0%
!!! TCCAGAGAGTTTGTTTTTGG+TGG - chr1_3:5604256-5604275 Msa0099430:intron 40.0%
TCCACCAAAAACAAACTCTC+TGG + chr1_3:5604260-5604279 None:intergenic 40.0%
! CTCGTTTTCATCGATCACAA+AGG + chr1_3:5604539-5604558 None:intergenic 40.0%
GACCATGAAAGATACGTTGT+TGG + chr1_3:5604584-5604603 None:intergenic 40.0%
CATCAATATCCCTGTGTATG+TGG + chr1_3:5604735-5604754 None:intergenic 40.0%
! GAATTTGGTTCCCTCTTCAA+GGG - chr1_3:5604774-5604793 Msa0099430:intron 40.0%
! AATTTGGTTCCCTCTTCAAG+GGG - chr1_3:5604775-5604794 Msa0099430:intron 40.0%
GACTTAAACCAGTTGCAGAT+TGG + chr1_3:5604826-5604845 None:intergenic 40.0%
ATTAGAACATTGCATCGCGT+AGG - chr1_3:5604896-5604915 Msa0099430:CDS 40.0%
GGTTTAAATCGAGACACTGA+AGG + chr1_3:5604950-5604969 None:intergenic 40.0%
ATGAAAGGCTGCAAAAGTCA+AGG - chr1_3:5605173-5605192 Msa0099430:intron 40.0%
TGAAAGGCTGCAAAAGTCAA+GGG - chr1_3:5605174-5605193 Msa0099430:intron 40.0%
!! TAGGTGGTGGTGGAATAAAT+CGG + chr1_3:5605624-5605643 None:intergenic 40.0%
ATTTATTCCACCACCACCTA+AGG - chr1_3:5605624-5605643 Msa0099430:CDS 40.0%
TTTATTCCACCACCACCTAA+GGG - chr1_3:5605625-5605644 Msa0099430:CDS 40.0%
ACCACCTACTGATAAATTGG+TGG - chr1_3:5605648-5605667 Msa0099430:CDS 40.0%
TGTGCCACCAATTTATCAGT+AGG + chr1_3:5605655-5605674 None:intergenic 40.0%
AGAATTGGATGCGACACTTT+GGG - chr1_3:5605752-5605771 Msa0099430:CDS 40.0%
TCCCCAACCAATTACTACAA+TGG - chr1_3:5605980-5605999 Msa0099430:five_prime_UTR 40.0%
GGTTTGAGAAGCAAGTGAAG+TGG + chr1_3:5597607-5597626 None:intergenic 45.0%
AGAGATGAAACGTCGTCGTT+TGG + chr1_3:5597770-5597789 None:intergenic 45.0%
GGGCGAAATGGAAAGAAGAT+TGG + chr1_3:5597793-5597812 None:intergenic 45.0%
GCCAAAGTCTTTACTAGCGA+TGG + chr1_3:5597822-5597841 None:intergenic 45.0%
CGCCACTGTTAAATTTGTGG+TGG + chr1_3:5597927-5597946 None:intergenic 45.0%
!! GACGGATTATCTTGGGTTGA+CGG - chr1_3:5598147-5598166 Msa0099430:intron 45.0%
!! GATTATCTTGGGTTGACGGT+GGG - chr1_3:5598151-5598170 Msa0099430:intron 45.0%
GGTGGAACTTTATCTAACGC+CGG - chr1_3:5598172-5598191 Msa0099430:intron 45.0%
AGTGGTCAGACTTTCCGTTA+TGG - chr1_3:5598199-5598218 Msa0099430:intron 45.0%
! TTGCCGTTTGAGGACCATAA+CGG + chr1_3:5598216-5598235 None:intergenic 45.0%
TCCTCAAACGGCAAACGTAA+CGG - chr1_3:5598222-5598241 Msa0099430:intron 45.0%
! AACGGCAAACGTAACGGAAT+TGG - chr1_3:5598228-5598247 Msa0099430:intron 45.0%
! TTTGCTTCACTTGGTGGTCT+TGG - chr1_3:5598313-5598332 Msa0099430:intron 45.0%
!! GGCTTGTTGAAGAACGATTC+TGG + chr1_3:5598362-5598381 None:intergenic 45.0%
TCTTCAACAAGCCCCAGATA+TGG - chr1_3:5598369-5598388 Msa0099430:intron 45.0%
GTGGATGAGGGTGATTTACT+CGG - chr1_3:5598633-5598652 Msa0099430:intron 45.0%
TACTAAAGATGCAGAGTGGC+TGG - chr1_3:5598669-5598688 Msa0099430:intron 45.0%
!!! AGGTGACGGTTTTGATTACG+TGG - chr1_3:5598705-5598724 Msa0099430:intron 45.0%
!!! GACGGTTTTGATTACGTGGA+AGG - chr1_3:5598709-5598728 Msa0099430:intron 45.0%
ATGACGACCCTTGTAATGGT+TGG - chr1_3:5598749-5598768 Msa0099430:intron 45.0%
TTGTGGGCCAACCATTACAA+GGG + chr1_3:5598759-5598778 None:intergenic 45.0%
ATTGTGGGCCAACCATTACA+AGG + chr1_3:5598760-5598779 None:intergenic 45.0%
TTCGAACCCATCGGAATTGT+GGG + chr1_3:5598775-5598794 None:intergenic 45.0%
CTGAAGAAGGAAGACAAACC+GGG + chr1_3:5598810-5598829 None:intergenic 45.0%
GCTGAAGAAGGAAGACAAAC+CGG + chr1_3:5598811-5598830 None:intergenic 45.0%
GTTTGTCTTCCTTCTTCAGC+TGG - chr1_3:5598811-5598830 Msa0099430:intron 45.0%
! TTTTTGATCCGTGCTCCGTT+CGG - chr1_3:5598978-5598997 Msa0099430:intron 45.0%
!! GTTTTCTATGCCTGACTCGT+CGG + chr1_3:5599536-5599555 None:intergenic 45.0%
CAATGACGCAATATTGACCC+TGG - chr1_3:5599701-5599720 Msa0099430:intron 45.0%
GTTGTACTTAGCAGCTTCCA+GGG + chr1_3:5599721-5599740 None:intergenic 45.0%
AGTTGTACTTAGCAGCTTCC+AGG + chr1_3:5599722-5599741 None:intergenic 45.0%
TTGGGGGAAAACTGACTACA+CGG - chr1_3:5600049-5600068 Msa0099430:intron 45.0%
TTGGCCATTTACGGAACTGT+GGG + chr1_3:5600312-5600331 None:intergenic 45.0%
TTTGGCCATTTACGGAACTG+TGG + chr1_3:5600313-5600332 None:intergenic 45.0%
!! TGGAGGGTTGAGATTTGTTG+AGG - chr1_3:5600467-5600486 Msa0099430:intron 45.0%
!! GGAGGGTTGAGATTTGTTGA+GGG - chr1_3:5600468-5600487 Msa0099430:intron 45.0%
TTTGCTACGTGTAAAGCGTG+TGG - chr1_3:5600527-5600546 Msa0099430:intron 45.0%
GAAGAGGATGCTAAAGCCAA+AGG - chr1_3:5600549-5600568 Msa0099430:intron 45.0%
AGGTGCATCCCATATACCTT+TGG + chr1_3:5600568-5600587 None:intergenic 45.0%
AACATGTTCAACCATGGGTG+AGG + chr1_3:5600588-5600607 None:intergenic 45.0%
CAACAGTGGGTACACTAGAA+TGG + chr1_3:5600685-5600704 None:intergenic 45.0%
CTTACTTGCTTCGCAACAGT+GGG + chr1_3:5600698-5600717 None:intergenic 45.0%
ACTTACTTGCTTCGCAACAG+TGG + chr1_3:5600699-5600718 None:intergenic 45.0%
! GTAGGGGTGTGCAAAAAATG+TGG + chr1_3:5603221-5603240 None:intergenic 45.0%
ACAGTTGGGTGTTCCTAGTA+GGG + chr1_3:5603238-5603257 None:intergenic 45.0%
TTGCAACCAAGGTCACAGTT+GGG + chr1_3:5603252-5603271 None:intergenic 45.0%
TTTGCAACCAAGGTCACAGT+TGG + chr1_3:5603253-5603272 None:intergenic 45.0%
GGTGGTCCTTGAAGCAAATT+AGG + chr1_3:5603311-5603330 None:intergenic 45.0%
! ACCACCAATTTTAAACGGGG+TGG - chr1_3:5603325-5603344 Msa0099430:intron 45.0%
! CCACCAATTTTAAACGGGGT+GGG - chr1_3:5603326-5603345 Msa0099430:intron 45.0%
TAAACGGGGTGGGTAAGATT+TGG - chr1_3:5603336-5603355 Msa0099430:intron 45.0%
! TCAGCTGTTTCATCACACTG+CGG - chr1_3:5603467-5603486 Msa0099430:intron 45.0%
TAGGTTCCCAGTTGCCTTAT+TGG + chr1_3:5603918-5603937 None:intergenic 45.0%
TGGGAACCTACATTCCTTTC+CGG - chr1_3:5603928-5603947 Msa0099430:intron 45.0%
AACCTACATTCCTTTCCGGT+AGG - chr1_3:5603932-5603951 Msa0099430:intron 45.0%
TGCACAGAAAAAAGTGGCTC+CGG + chr1_3:5604135-5604154 None:intergenic 45.0%
!!! GAGCCACTTTTTTCTGTGCA+TGG - chr1_3:5604135-5604154 Msa0099430:intron 45.0%
GTGCCATGCACAGAAAAAAG+TGG + chr1_3:5604141-5604160 None:intergenic 45.0%
CTGTGTATGTGGAACCACAA+GGG + chr1_3:5604724-5604743 None:intergenic 45.0%
CTTGTGGTTCCACATACACA+GGG - chr1_3:5604723-5604742 Msa0099430:intron 45.0%
! GGAATTTGGTTCCCTCTTCA+AGG - chr1_3:5604773-5604792 Msa0099430:intron 45.0%
ATGGGGGGAATTAATGCATG+TGG + chr1_3:5604869-5604888 None:intergenic 45.0%
ACCACTAAGTTACTCGTTCG+AGG - chr1_3:5605035-5605054 Msa0099430:CDS 45.0%
ACCTCGAACGAGTAACTTAG+TGG + chr1_3:5605039-5605058 None:intergenic 45.0%
! GACTTTTGCAGCCTTTCATG+TGG + chr1_3:5605172-5605191 None:intergenic 45.0%
GAAAGGCTGCAAAAGTCAAG+GGG - chr1_3:5605175-5605194 Msa0099430:intron 45.0%
TTATCAGTAGGTGGTCCCTT+AGG + chr1_3:5605643-5605662 None:intergenic 45.0%
GGGACCACCTACTGATAAAT+TGG - chr1_3:5605645-5605664 Msa0099430:CDS 45.0%
GCCACCAATTTATCAGTAGG+TGG + chr1_3:5605652-5605671 None:intergenic 45.0%
ACTACACGTCTCAGGAGAAT+TGG - chr1_3:5605737-5605756 Msa0099430:CDS 45.0%
GAGAATTGGATGCGACACTT+TGG - chr1_3:5605751-5605770 Msa0099430:CDS 45.0%
GAATTGGATGCGACACTTTG+GGG - chr1_3:5605753-5605772 Msa0099430:CDS 45.0%
! TGCGACACTTTGGGGATAAA+TGG - chr1_3:5605761-5605780 Msa0099430:CDS 45.0%
! CATTGGCTATACTTGCACCT+GGG - chr1_3:5605818-5605837 Msa0099430:CDS 45.0%
!! ATATATTATAAAAGAAAATT+AGG - chr1_3:5599128-5599147 Msa0099430:intron 5.0%
!!! AATGATTTTATTAAAAAATT+GGG + chr1_3:5603766-5603785 None:intergenic 5.0%
!!! AAATGATTTTATTAAAAAAT+TGG + chr1_3:5603767-5603786 None:intergenic 5.0%
!!! GTTTTTATTTTTATATTAAA+AGG - chr1_3:5604049-5604068 Msa0099430:intron 5.0%
GATGAAACGTCGTCGTTTGG+TGG + chr1_3:5597767-5597786 None:intergenic 50.0%
CGATGGAATTAGGGGCGAAA+TGG + chr1_3:5597805-5597824 None:intergenic 50.0%
! TACGGCTTTTACCACATCGG+CGG + chr1_3:5597891-5597910 None:intergenic 50.0%
!!! GGTGGTTGCTGCTGCTTTTA+CGG + chr1_3:5597909-5597928 None:intergenic 50.0%
CGCCGCCACTGTTAAATTTG+TGG + chr1_3:5597930-5597949 None:intergenic 50.0%
! GGTAACGGTCACTCCATCAA+CGG - chr1_3:5597953-5597972 Msa0099430:CDS 50.0%
TTCTTCCCATAATGCCCCAC+CGG + chr1_3:5598080-5598099 None:intergenic 50.0%
! TTAAGCTTGTTCCGAGGTCG+TGG - chr1_3:5598125-5598144 Msa0099430:intron 50.0%
AGATAATCCGTCCACGACCT+CGG + chr1_3:5598139-5598158 None:intergenic 50.0%
!! AGGTCGTGGACGGATTATCT+TGG - chr1_3:5598139-5598158 Msa0099430:intron 50.0%
!! GGTCGTGGACGGATTATCTT+GGG - chr1_3:5598140-5598159 Msa0099430:intron 50.0%
!! GGATTATCTTGGGTTGACGG+TGG - chr1_3:5598150-5598169 Msa0099430:intron 50.0%
! TTATCTAACGCCGGTGTCAG+TGG - chr1_3:5598181-5598200 Msa0099430:intron 50.0%
GAAAGTCTGACCACTGACAC+CGG + chr1_3:5598194-5598213 None:intergenic 50.0%
! TCCGTTACGTTTGCCGTTTG+AGG + chr1_3:5598226-5598245 None:intergenic 50.0%
! CTTGGTGGTCTTGGTCAGTT+TGG - chr1_3:5598322-5598341 Msa0099430:intron 50.0%
GTGACACTACCAGAAGGTGA+CGG - chr1_3:5598691-5598710 Msa0099430:intron 50.0%
TTACGTGGAAGGGTTCGTTG+TGG - chr1_3:5598720-5598739 Msa0099430:intron 50.0%
GTTCGAACCCATCGGAATTG+TGG + chr1_3:5598776-5598795 None:intergenic 50.0%
TCTTCCTTCTTCAGCTGGAC+CGG - chr1_3:5598816-5598835 Msa0099430:intron 50.0%
! TTTTGATCCGTGCTCCGTTC+GGG - chr1_3:5598979-5598998 Msa0099430:intron 50.0%
CAATAAACCCGAACGGAGCA+CGG + chr1_3:5598989-5599008 None:intergenic 50.0%
TGTAAAGGATCCGACGAGTC+AGG - chr1_3:5599523-5599542 Msa0099430:intron 50.0%
! GTCAGTTTTCCCCCAACCAT+TGG + chr1_3:5600045-5600064 None:intergenic 50.0%
TGGCCATTTACGGAACTGTG+GGG + chr1_3:5600311-5600330 None:intergenic 50.0%
ACGTGTAAAGCGTGTGGAAG+AGG - chr1_3:5600533-5600552 Msa0099430:intron 50.0%
ATCCTCAAACATGGGGTTGG+TGG - chr1_3:5600657-5600676 Msa0099430:intron 50.0%
!! AGTTCCTAGTGGACCCCTTT+TGG + chr1_3:5601088-5601107 None:intergenic 50.0%
AAAGGGGTCCACTAGGAACT+AGG - chr1_3:5601088-5601107 Msa0099430:intron 50.0%
AAGGGGTCCACTAGGAACTA+GGG - chr1_3:5601089-5601108 Msa0099430:intron 50.0%
TGAACACCCCTAGTTCCTAG+TGG + chr1_3:5601099-5601118 None:intergenic 50.0%
!! CTAGGAACTAGGGGTGTTCA+TGG - chr1_3:5601099-5601118 Msa0099430:intron 50.0%
CAGTTGGGTGTTCCTAGTAG+GGG + chr1_3:5603237-5603256 None:intergenic 50.0%
CACAGTTGGGTGTTCCTAGT+AGG + chr1_3:5603239-5603258 None:intergenic 50.0%
GTGAAAGAGGCAAATGGCTC+AGG + chr1_3:5603288-5603307 None:intergenic 50.0%
! CCCACCCCGTTTAAAATTGG+TGG + chr1_3:5603329-5603348 None:intergenic 50.0%
GTGGGTAAGATTTGGAGGGT+GGG - chr1_3:5603344-5603363 Msa0099430:intron 50.0%
! TGGGAAATGGGGTCCCATTT+TGG + chr1_3:5603414-5603433 None:intergenic 50.0%
GCAGTGTGATGAAACAGCTG+AGG + chr1_3:5603468-5603487 None:intergenic 50.0%
TCACTATCACTCCTTGCCTG+TGG - chr1_3:5603888-5603907 Msa0099430:intron 50.0%
TATCACTCCTTGCCTGTGGT+TGG - chr1_3:5603892-5603911 Msa0099430:intron 50.0%
TTATTGGCCAACCACAGGCA+AGG + chr1_3:5603902-5603921 None:intergenic 50.0%
! TTGCCTGTGGTTGGCCAATA+AGG - chr1_3:5603901-5603920 Msa0099430:intron 50.0%
! TTGCCTTATTGGCCAACCAC+AGG + chr1_3:5603907-5603926 None:intergenic 50.0%
! TGGTTGGCCAATAAGGCAAC+TGG - chr1_3:5603908-5603927 Msa0099430:intron 50.0%
! GGTTGGCCAATAAGGCAACT+GGG - chr1_3:5603909-5603928 Msa0099430:intron 50.0%
GTCCTACCGGAAAGGAATGT+AGG + chr1_3:5603937-5603956 None:intergenic 50.0%
ATATGGCTGTCCTACCGGAA+AGG + chr1_3:5603945-5603964 None:intergenic 50.0%
AACCGGATTACAGTGACACC+CGG - chr1_3:5604643-5604662 Msa0099430:intron 50.0%
!! AACCGGGTGTCACTGTAATC+CGG + chr1_3:5604648-5604667 None:intergenic 50.0%
CCTGTGTATGTGGAACCACA+AGG + chr1_3:5604725-5604744 None:intergenic 50.0%
CCTTGTGGTTCCACATACAC+AGG - chr1_3:5604722-5604741 Msa0099430:intron 50.0%
AGTTGCAGATTGGGCAAGGT+GGG + chr1_3:5604816-5604835 None:intergenic 50.0%
AACCAGTTGCAGATTGGGCA+AGG + chr1_3:5604820-5604839 None:intergenic 50.0%
GGACTATTACGTAGGAGGTC+AGG + chr1_3:5604997-5605016 None:intergenic 50.0%
CAGGTGGGATGATAGACACT+CGG - chr1_3:5605555-5605574 Msa0099430:CDS 50.0%
GGATGATAGACACTCGGTAG+TGG - chr1_3:5605561-5605580 Msa0099430:CDS 50.0%
TCTTCCTCACTACACGTCTC+AGG - chr1_3:5605729-5605748 Msa0099430:CDS 50.0%
TTCTCCTGAGACGTGTAGTG+AGG + chr1_3:5605736-5605755 None:intergenic 50.0%
CCAGGTGCAAGTATAGCCAA+TGG + chr1_3:5605820-5605839 None:intergenic 50.0%
! CCATTGGCTATACTTGCACC+TGG - chr1_3:5605817-5605836 Msa0099430:CDS 50.0%
AATTTAACAGTGGCGGCGCG+TGG - chr1_3:5597932-5597951 Msa0099430:CDS 55.0%
GACAAGTCCTTTCTCCGCCA+TGG + chr1_3:5597984-5598003 None:intergenic 55.0%
GTTCCACACGTCGACGTTTC+CGG - chr1_3:5598058-5598077 Msa0099430:CDS 55.0%
! ACGTTTCCGGTGGGGCATTA+TGG - chr1_3:5598071-5598090 Msa0099430:CDS 55.0%
! CGTTTCCGGTGGGGCATTAT+GGG - chr1_3:5598072-5598091 Msa0099430:CDS 55.0%
!! TATCTTGGGTTGACGGTGGG+TGG - chr1_3:5598154-5598173 Msa0099430:intron 55.0%
GCTCAGAGTTCGCAAGAGTC+CGG - chr1_3:5598510-5598529 Msa0099430:intron 55.0%
TGGCTGGTGACACTACCAGA+AGG - chr1_3:5598685-5598704 Msa0099430:intron 55.0%
! TGGTTGGCCCACAATTCCGA+TGG - chr1_3:5598765-5598784 Msa0099430:intron 55.0%
! GGTTGGCCCACAATTCCGAT+GGG - chr1_3:5598766-5598785 Msa0099430:intron 55.0%
AGAACCGGTCCAGCTGAAGA+AGG + chr1_3:5598823-5598842 None:intergenic 55.0%
GGTCCCCACAGTTCCGTAAA+TGG - chr1_3:5600305-5600324 Msa0099430:intron 55.0%
TATGGGATGCACCTCACCCA+TGG - chr1_3:5600574-5600593 Msa0099430:intron 55.0%
GACCACCAACCCCATGTTTG+AGG + chr1_3:5600662-5600681 None:intergenic 55.0%
TGGACCAAAAGGGGTCCACT+AGG - chr1_3:5601081-5601100 Msa0099430:intron 55.0%
AGGGGTCCACTAGGAACTAG+GGG - chr1_3:5601090-5601109 Msa0099430:intron 55.0%
GGAACACCCAACTGTGACCT+TGG - chr1_3:5603243-5603262 Msa0099430:intron 55.0%
ACGGGGTGGGTAAGATTTGG+AGG - chr1_3:5603339-5603358 Msa0099430:intron 55.0%
CGGGGTGGGTAAGATTTGGA+GGG - chr1_3:5603340-5603359 Msa0099430:intron 55.0%
GGTGGGTAAGATTTGGAGGG+TGG - chr1_3:5603343-5603362 Msa0099430:intron 55.0%
!! GGGTGTCACTGTAATCCGGT+TGG + chr1_3:5604644-5604663 None:intergenic 55.0%
TTGCAGATTGGGCAAGGTGG+GGG + chr1_3:5604814-5604833 None:intergenic 55.0%
GTTGCAGATTGGGCAAGGTG+GGG + chr1_3:5604815-5604834 None:intergenic 55.0%
CAGTTGCAGATTGGGCAAGG+TGG + chr1_3:5604817-5604836 None:intergenic 55.0%
CACCTTGCCCAATCTGCAAC+TGG - chr1_3:5604815-5604834 Msa0099430:CDS 55.0%
TCAGTAGGTGGTCCCTTAGG+TGG + chr1_3:5605640-5605659 None:intergenic 55.0%
GGTGGTGTAAGGGCGGAGTA+CGG + chr1_3:5597870-5597889 None:intergenic 60.0%
CCACATCGGCGGTGGTGTAA+GGG + chr1_3:5597880-5597899 None:intergenic 60.0%
ACCACATCGGCGGTGGTGTA+AGG + chr1_3:5597881-5597900 None:intergenic 60.0%
! GGCTTTTACCACATCGGCGG+TGG + chr1_3:5597888-5597907 None:intergenic 60.0%
CTCCATCAACGGCCAAGCCA+TGG - chr1_3:5597964-5597983 Msa0099430:CDS 60.0%
CATCAACGGCCAAGCCATGG+CGG - chr1_3:5597967-5597986 Msa0099430:CDS 60.0%
GTCCTTTCTCCGCCATGGCT+TGG + chr1_3:5597979-5597998 None:intergenic 60.0%
TGTCCTCGACATGCGAGCCA+CGG - chr1_3:5598000-5598019 Msa0099430:CDS 60.0%
TTGAAAAGGCTCCTCCGCCG+TGG + chr1_3:5598020-5598039 None:intergenic 60.0%
CACACGTCGACGTTTCCGGT+GGG - chr1_3:5598062-5598081 Msa0099430:CDS 60.0%
ACACGTCGACGTTTCCGGTG+GGG - chr1_3:5598063-5598082 Msa0099430:CDS 60.0%
GCTTGTTCCGAGGTCGTGGA+CGG - chr1_3:5598129-5598148 Msa0099430:intron 60.0%
ATTGGGCAAGGTGGGGGAGA+GGG + chr1_3:5604808-5604827 None:intergenic 60.0%
GTAGGTGGTCCCTTAGGTGG+TGG + chr1_3:5605637-5605656 None:intergenic 60.0%
TAAGGGCGGAGTACGGCGAG+GGG + chr1_3:5597863-5597882 None:intergenic 65.0%
GTAAGGGCGGAGTACGGCGA+GGG + chr1_3:5597864-5597883 None:intergenic 65.0%
TGTAAGGGCGGAGTACGGCG+AGG + chr1_3:5597865-5597884 None:intergenic 65.0%
CATCGGCGGTGGTGTAAGGG+CGG + chr1_3:5597877-5597896 None:intergenic 65.0%
CCCTTACACCACCGCCGATG+TGG - chr1_3:5597877-5597896 Msa0099430:CDS 65.0%
ACAGTGGCGGCGCGTGGTAA+CGG - chr1_3:5597938-5597957 Msa0099430:CDS 65.0%
! CGCCATGGCTTGGCCGTTGA+TGG + chr1_3:5597969-5597988 None:intergenic 65.0%
! GGCCAAGCCATGGCGGAGAA+AGG - chr1_3:5597974-5597993 Msa0099430:CDS 65.0%
CCACCGGAAACGTCGACGTG+TGG + chr1_3:5598064-5598083 None:intergenic 65.0%
CCACACGTCGACGTTTCCGG+TGG - chr1_3:5598061-5598080 Msa0099430:CDS 65.0%
GGGAGGGGACCCCTTGAAGA+GGG + chr1_3:5604787-5604806 None:intergenic 65.0%
TTGGGCAAGGTGGGGGAGAG+GGG + chr1_3:5604807-5604826 None:intergenic 65.0%
GATTGGGCAAGGTGGGGGAG+AGG + chr1_3:5604809-5604828 None:intergenic 65.0%
! GGTGGTCCCTTAGGTGGTGG+TGG + chr1_3:5605634-5605653 None:intergenic 65.0%
GAGTACGGCGAGGGGAGTGG+AGG + chr1_3:5597855-5597874 None:intergenic 70.0%
CCTCGACATGCGAGCCACGG+CGG - chr1_3:5598003-5598022 Msa0099430:CDS 70.0%
GGGGAGGGGACCCCTTGAAG+AGG + chr1_3:5604788-5604807 None:intergenic 70.0%
CAAGGTGGGGGAGAGGGGAG+GGG + chr1_3:5604802-5604821 None:intergenic 70.0%
GCAAGGTGGGGGAGAGGGGA+GGG + chr1_3:5604803-5604822 None:intergenic 70.0%
GCGGAGTACGGCGAGGGGAG+TGG + chr1_3:5597858-5597877 None:intergenic 75.0%
CCGCCGTGGCTCGCATGTCG+AGG + chr1_3:5598006-5598025 None:intergenic 75.0%
CGACATGCGAGCCACGGCGG+AGG - chr1_3:5598006-5598025 Msa0099430:CDS 75.0%
GGCAAGGTGGGGGAGAGGGG+AGG + chr1_3:5604804-5604823 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 5597604 5606089 5597604 ID=Msa0099430;Name=Msa0099430
chr1_3 mRNA 5597604 5606089 5597604 ID=Msa0099430-mRNA-1;Parent=Msa0099430;Name=Msa0099430-mRNA-1;_AED=0.07;_eAED=0.07;_QI=112|1|1|1|1|1|4|216|509
chr1_3 exon 5597604 5598135 5597604 ID=Msa0099430-mRNA-1:exon:2158;Parent=Msa0099430-mRNA-1
chr1_3 exon 5602981 5603243 5602981 ID=Msa0099430-mRNA-1:exon:2157;Parent=Msa0099430-mRNA-1
chr1_3 exon 5604790 5605065 5604790 ID=Msa0099430-mRNA-1:exon:2156;Parent=Msa0099430-mRNA-1
chr1_3 exon 5605303 5606089 5605303 ID=Msa0099430-mRNA-1:exon:2155;Parent=Msa0099430-mRNA-1
chr1_3 five_prime_UTR 5605978 5606089 5605978 ID=Msa0099430-mRNA-1:five_prime_utr;Parent=Msa0099430-mRNA-1
chr1_3 CDS 5605303 5605977 5605303 ID=Msa0099430-mRNA-1:cds;Parent=Msa0099430-mRNA-1
chr1_3 CDS 5604790 5605065 5604790 ID=Msa0099430-mRNA-1:cds;Parent=Msa0099430-mRNA-1
chr1_3 CDS 5602981 5603243 5602981 ID=Msa0099430-mRNA-1:cds;Parent=Msa0099430-mRNA-1
chr1_3 CDS 5597820 5598135 5597820 ID=Msa0099430-mRNA-1:cds;Parent=Msa0099430-mRNA-1
chr1_3 three_prime_UTR 5597604 5597819 5597604 ID=Msa0099430-mRNA-1:three_prime_utr;Parent=Msa0099430-mRNA-1
Gene Sequence

>Msa0099430

ATGATAGCTTACCTTGAACACTTCGTTCATGGAAACGACACAGAATCACCACCAAACGACGACGTTTCATCTCTCCAATCTTCTTTCCATTTCGCCCCTAATTCCATCGCTAGTAAAGACTTTGGCGGCATGAAATCCTCCACTCCCCTCGCCGTACTCCGCCCTTACACCACCGCCGATGTGGTAAAAGCCGTAAAAGCAGCAGCAACCACCACAAATTTAACAGTGGCGGCGCGTGGTAACGGTCACTCCATCAACGGCCAAGCCATGGCGGAGAAAGGACTTGTCCTCGACATGCGAGCCACGGCGGAGGAGCCTTTTCAACTTCTCTACGTCGACGGTGTTCCACACGTCGACGTTTCCGGTGGGGCATTATGGGAAGAAGTGTTGAAACGCTGCGTTTCGAATTTTAAGCTTGTTCCGAGGTCGTGGACGGATTATCTTGGGTTGACGGTGGGTGGAACTTTATCTAACGCCGGTGTCAGTGGTCAGACTTTCCGTTATGGTCCTCAAACGGCAAACGTAACGGAATTGGAAGTTGTTACTGGTAAAGGTGATAGTTTTGTTTGTAATGAAAATCAAAATTCTGAGCTCTTTTTTGCTTCACTTGGTGGTCTTGGTCAGTTTGGTGTCATCACTAGAGCCAGAATCGTTCTTCAACAAGCCCCAGATATGGTGAGGTGGATGAGGGTGATTTACTCGGAATTTGAGGACTATACTAAAGATGCAGAGTGGCTGGTGACACTACCAGAAGGTGACGGTTTTGATTACGTGGAAGGGTTCGTTGTGGCTAACAATGACGACCCTTGTAATGGTTGGCCCACAATTCCGATGGGTTCGAACCAAATTTTCAACCCGGTTTGTCTTCCTTCTTCAGCTGGACCGGTTCTCTATTGCTTAGAGCTTGCTCTTCATTATCGTAAAACCGCTCGATCTTCTGAAGTTAATACGAAAGTGGATAGATTGCTTGGAGGGTTGAGATTTGTTGAGGGAATAAAATTTGAGGATGATGTGAAGTACATGGATTTTTTGCTACGTGTAAAGCGTGTGGAAGAGGATGCTAAAGCCAAAGGTATATGGGATGCACCTCACCCATGGTTGAACATGTTTGTGTCCAAGACCGACATTGCTGATTTTGATCGTGAAGTGTTCAAGAAAATCCTCAAACATGGGGTTGGTGGTCCCATTCTAGTGTACCCACTGTTGCGAAGCAAGTGGGATGATAGACACTCGGTAGTGGTGCCAGACAGCAACATTTTCTACATAATAGCATTACTCCGATTTATTCCACCACCACCTAAGGGACCACCTACTGATAAATTGGTGGCACAAAACAATGCAATTATTCAATTGTGCTACAACAAGGGATTTGATTTCAAGTTATATCTTCCTCACTACACGTCTCAGGAGAATTGGATGCGACACTTTGGGGATAAATGGACTAGATTTGTCCAGAGAAAACAAAATTTTGATCCATTGGCTATACTTGCACCTGGGCAAAAAATATTTTCCAGAAACCAACTTAAATAA
Protein sequence

>Msa0099430

MIAYLEHFVHGNDTESPPNDDVSSLQSSFHFAPNSIASKDFGGMKSSTPLAVLRPYTTADVVKAVKAAATTTNLTVAARGNGHSINGQAMAEKGLVLDMRATAEEPFQLLYVDGVPHVDVSGGALWEEVLKRCVSNFKLVPRSWTDYLGLTVGGTLSNAGVSGQTFRYGPQTANVTELEVVTGKGDSFVCNENQNSELFFASLGGLGQFGVITRARIVLQQAPDMVRWMRVIYSEFEDYTKDAEWLVTLPEGDGFDYVEGFVVANNDDPCNGWPTIPMGSNQIFNPVCLPSSAGPVLYCLELALHYRKTARSSEVNTKVDRLLGGLRFVEGIKFEDDVKYMDFLLRVKRVEEDAKAKGIWDAPHPWLNMFVSKTDIADFDREVFKKILKHGVGGPILVYPLLRSKWDDRHSVVVPDSNIFYIIALLRFIPPPPKGPPTDKLVAQNNAIIQLCYNKGFDFKLYLPHYTSQENWMRHFGDKWTRFVQRKQNFDPLAILAPGQKIFSRNQLK*