AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1398450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1398450 MtrunA17_Chr3g0115691 97.238 181 5 0 1 181 162 342 6.62e-129 365
Msa1398450 MtrunA17_Chr2g0304641 54.494 178 75 2 4 180 170 342 1.53e-64 201
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1398450 AT1G78140.1 75.000 180 44 1 2 180 175 354 4.07e-99 290
Msa1398450 AT2G41040.1 50.829 181 78 3 4 180 179 352 6.20e-58 185

Find 101 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAAATTTGTGTACTCTTT+TGG 0.188572 tig0022253:+81396 None:intergenic
TAGAATATAAATCAAGTATC+AGG 0.201212 tig0022253:-79999 Msa1398450:CDS
TCTGCTGCAAAGCCGAAATA+AGG 0.286504 tig0022253:-79876 Msa1398450:intron
AGGAAACTCAAACCTTATTT+CGG 0.331192 tig0022253:+79864 None:intergenic
GGTTTCCTAAAACCAGTATT+AGG 0.339433 tig0022253:-81567 Msa1398450:CDS
ATGATATTTCCACCTAATAC+TGG 0.344800 tig0022253:+81555 None:intergenic
GGATTTAAATGCATTAGAAA+TGG 0.364474 tig0022253:-79915 Msa1398450:CDS
TATGACATGCAGATAATCTA+AGG 0.366711 tig0022253:+79666 None:intergenic
ACAGAATTGTGATGAGTTCA+TGG 0.390984 tig0022253:+79461 None:intergenic
AGAAGACGAAGTTGAAGCTT+AGG 0.393539 tig0022253:+84153 None:intergenic
TGTTGCAACCACCTACATAC+TGG 0.395943 tig0022253:-80575 Msa1398450:CDS
ATTATCTGCATGTCATAAGT+TGG 0.399907 tig0022253:-79660 Msa1398450:three_prime_UTR
ATAAGTAATGCTAAGAACTA+TGG 0.406172 tig0022253:-83065 Msa1398450:five_prime_UTR
TACTAAGAGCAGCAATCCTT+TGG 0.415416 tig0022253:-83780 Msa1398450:five_prime_UTR
AAGCGCGTGGGGCGCGTGAA+TGG 0.427643 tig0022253:+84192 None:intergenic
CCTATCATAATTCGAATCTC+TGG 0.434478 tig0022253:+84243 None:intergenic
CAATATTATTACCGTTGGAT+TGG 0.439591 tig0022253:+84095 None:intergenic
AATAAAGTAGAAGGGTCAAA+TGG 0.439677 tig0022253:+79520 None:intergenic
CATTGATAAAGCAGGATTAG+TGG 0.440360 tig0022253:+83724 None:intergenic
GATTTAAATGCATTAGAAAT+GGG 0.440850 tig0022253:-79914 Msa1398450:CDS
GCCGCAGTTTGAACAGATGA+AGG 0.448015 tig0022253:-81589 Msa1398450:intron
TGATGAGTTCATGGAGTTCA+TGG 0.451481 tig0022253:+79470 None:intergenic
GTTAGATTAACCTCTTTCTC+AGG 0.455151 tig0022253:+82250 None:intergenic
TAGGTACATTAAGAGTTTAG+AGG 0.457038 tig0022253:-82068 Msa1398450:five_prime_UTR
TCTCTGCAAGGCGTGTGGGC+TGG 0.459953 tig0022253:-79940 Msa1398450:CDS
CCAGAGATTCGAATTATGAT+AGG 0.461106 tig0022253:-84243 Msa1398450:five_prime_UTR
TCACTTGGTACATAAAGATA+AGG 0.470936 tig0022253:-79724 Msa1398450:three_prime_UTR
ATGTTATGAATTTGTTCAGC+AGG 0.472552 tig0022253:-81430 Msa1398450:CDS
AAGTTCACGTTCAGAGAGAA+AGG 0.474732 tig0022253:+79968 None:intergenic
TTCAAGATGCGTTTGGTCAC+CGG 0.475232 tig0022253:+83097 None:intergenic
CTGAAAAGCTCAGTGGAAGC+TGG 0.480418 tig0022253:+83032 None:intergenic
TGCAAGGCGTGTGGGCTGGT+CGG 0.485394 tig0022253:-79936 Msa1398450:CDS
CATTTCTCACACATCATGAA+TGG 0.489996 tig0022253:+79578 None:intergenic
TCGTGAGTTCAAGATGCGTT+TGG 0.491834 tig0022253:+83090 None:intergenic
ATCGATGCTAGTTGTGGAAG+TGG 0.499787 tig0022253:-81534 Msa1398450:CDS
ATCATCACTTCACTTGGAAA+AGG 0.500065 tig0022253:-79633 Msa1398450:three_prime_UTR
TTACCGTTGGATTGGTGTCA+AGG 0.502570 tig0022253:+84103 None:intergenic
AAATTGGGATTGTAAGTAAG+AGG 0.506975 tig0022253:-84349 Msa1398450:five_prime_UTR
CAGGAGCAGCTCTTCACTGT+TGG 0.508797 tig0022253:-81187 Msa1398450:CDS
GGGTGGACCGTTGAAGTTGA+AGG 0.508818 tig0022253:+84318 None:intergenic
GAAGCTCTCTGCAAGGCGTG+TGG 0.509317 tig0022253:-79945 Msa1398450:CDS
TTATCTGCATGTCATAAGTT+GGG 0.509558 tig0022253:-79659 Msa1398450:three_prime_UTR
GGATTCCATTGCAGTGGAGA+AGG 0.510017 tig0022253:-83807 Msa1398450:five_prime_UTR
TATGTTATAACGCGTTGACT+TGG 0.512738 tig0022253:-83748 Msa1398450:five_prime_UTR
TTAACCTCTTTCTCAGGACC+TGG 0.515325 tig0022253:+82256 None:intergenic
GCAGCAGAAATCATCACAAA+AGG 0.517241 tig0022253:+79891 None:intergenic
GTTAAAAGCGTGGTTTCACT+TGG 0.525905 tig0022253:-79739 Msa1398450:three_prime_UTR
TCCTGCATGCACAGCATCGA+TGG 0.526627 tig0022253:+81205 None:intergenic
GGGAAGATCATCACTTCACT+TGG 0.526770 tig0022253:-79639 Msa1398450:three_prime_UTR
TCCATCGATGCTGTGCATGC+AGG 0.527473 tig0022253:-81206 Msa1398450:CDS
TACAACAACACAAGGGGAGG+GGG 0.529011 tig0022253:+84298 None:intergenic
CATTTCTCTATGAGAGGGGC+TGG 0.529730 tig0022253:-82309 Msa1398450:five_prime_UTR
TGTTGTTGTAAAGTTGAAGA+AGG 0.534991 tig0022253:-84285 Msa1398450:five_prime_UTR
CCAACTTACATTGATAAAGC+AGG 0.535319 tig0022253:+83716 None:intergenic
TTACAACAACACAAGGGGAG+GGG 0.536715 tig0022253:+84297 None:intergenic
TGTTAAGGATTCCATTGCAG+TGG 0.539065 tig0022253:-83813 Msa1398450:intron
AAGCTCTCTGCAAGGCGTGT+GGG 0.541226 tig0022253:-79944 Msa1398450:CDS
TGGTATCATTTCTCTATGAG+AGG 0.543088 tig0022253:-82315 Msa1398450:five_prime_UTR
AGAATATAAATCAAGTATCA+GGG 0.544688 tig0022253:-79998 Msa1398450:CDS
ACTTATGCTAAGCGGCGACT+AGG 0.544748 tig0022253:-82012 Msa1398450:intron
GCAACCACCTACATACTGGA+TGG 0.544849 tig0022253:-80571 Msa1398450:CDS
AACTTCCTTCTCCACTGCAA+TGG 0.548849 tig0022253:+83802 None:intergenic
CCGCAGTTTGAACAGATGAA+GGG 0.551772 tig0022253:-81588 Msa1398450:intron
GGTATCATTTCTCTATGAGA+GGG 0.554274 tig0022253:-82314 Msa1398450:five_prime_UTR
ACGAAGTTGAAGCTTAGGAG+TGG 0.558734 tig0022253:+84158 None:intergenic
TCGATGGAACTTGAAACAAA+AGG 0.560574 tig0022253:+81221 None:intergenic
AAAACCACCCCATACAGAAA+AGG 0.561587 tig0022253:+82279 None:intergenic
ACCTGTCAGAAAACATATAC+CGG 0.561836 tig0022253:-83116 Msa1398450:five_prime_UTR
CTTTACAACAACACAAGGGG+AGG 0.564491 tig0022253:+84295 None:intergenic
GAGATTCGAATTATGATAGG+AGG 0.565361 tig0022253:-84240 Msa1398450:five_prime_UTR
TTCCTAAAACCAGTATTAGG+TGG 0.565845 tig0022253:-81564 Msa1398450:CDS
ATCACTTCACTTGGAAAAGG+TGG 0.571336 tig0022253:-79630 Msa1398450:three_prime_UTR
GTTGCAACAAAGACACCTCC+AGG 0.580734 tig0022253:+80589 None:intergenic
AAAAGGCCCATCCAGTATGT+AGG 0.581231 tig0022253:+80564 None:intergenic
TTCAACTTTACAACAACACA+AGG 0.582266 tig0022253:+84290 None:intergenic
AATATCATCGATGCTAGTTG+TGG 0.584800 tig0022253:-81540 Msa1398450:CDS
CTTACAGCTGCTGATGGTGA+AGG 0.590848 tig0022253:+81164 None:intergenic
CAACCACCTACATACTGGAT+GGG 0.592989 tig0022253:-80570 Msa1398450:CDS
GTCAACGCGTTATAACATAC+AGG 0.595187 tig0022253:+83752 None:intergenic
TTGTTGAATCAGGACGCCGC+TGG 0.597878 tig0022253:-82335 Msa1398450:intron
GGTGAGAAGAAGAAGCGCGT+GGG 0.603165 tig0022253:+84180 None:intergenic
CGAAGTTGAAGCTTAGGAGT+GGG 0.603783 tig0022253:+84159 None:intergenic
TATTCACTTACAGCTGCTGA+TGG 0.608738 tig0022253:+81158 None:intergenic
TTTACAACAACACAAGGGGA+GGG 0.609390 tig0022253:+84296 None:intergenic
ACACACACCTTCAACTTCAA+CGG 0.617297 tig0022253:-84325 Msa1398450:five_prime_UTR
CAACTTTACAACAACACAAG+GGG 0.623403 tig0022253:+84292 None:intergenic
TGAACTTGAAGCTCTCTGCA+AGG 0.624469 tig0022253:-79952 Msa1398450:CDS
GGGTGAGAAGAAGAAGCGCG+TGG 0.624548 tig0022253:+84179 None:intergenic
GTATCATTTCTCTATGAGAG+GGG 0.632193 tig0022253:-82313 Msa1398450:five_prime_UTR
TCAACTTTACAACAACACAA+GGG 0.640498 tig0022253:+84291 None:intergenic
AAAGTAGAAGGGTCAAATGG+AGG 0.641672 tig0022253:+79523 None:intergenic
GTGAGAAGAAGAAGCGCGTG+GGG 0.644878 tig0022253:+84181 None:intergenic
TAACATACAGGACAAGCCAA+AGG 0.656511 tig0022253:+83764 None:intergenic
AGGCCCATCCAGTATGTAGG+TGG 0.662241 tig0022253:+80567 None:intergenic
CAACAACTACTTATGCTAAG+CGG 0.675622 tig0022253:-82020 Msa1398450:five_prime_UTR
ATTCCTTGACACCAATCCAA+CGG 0.685750 tig0022253:-84106 Msa1398450:intron
TCATAGAGAAATGATACCAG+CGG 0.688632 tig0022253:+82319 None:intergenic
GTGTTGATCTGTTAAAAGCG+TGG 0.700237 tig0022253:-79749 Msa1398450:three_prime_UTR
TGCATGCCTGAAAAGCTCAG+TGG 0.723162 tig0022253:+83025 None:intergenic
ACTACTCAGAGAATATGTTG+AGG 0.724151 tig0022253:-81455 Msa1398450:CDS
CATGATGTGTGAGAAATGTG+AGG 0.727942 tig0022253:-79573 Msa1398450:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATAATTTTGTATAATCAT+GGG + tig0022253:79863-79882 None:intergenic 10.0%
!!! ATTATAATTTTGTATAATCA+TGG + tig0022253:79864-79883 None:intergenic 10.0%
!!! ATGAATTTATTTTAGTTTAA+AGG - tig0022253:80352-80371 Msa1398450:intron 10.0%
!!! TGAATTTATTTTAGTTTAAA+GGG - tig0022253:80353-80372 Msa1398450:intron 10.0%
!! ATACAATTAAAGATTAAAAA+GGG + tig0022253:80857-80876 None:intergenic 10.0%
!! AATACAATTAAAGATTAAAA+AGG + tig0022253:80858-80877 None:intergenic 10.0%
!!! TTTTAATCTTTAATTGTATT+TGG - tig0022253:80858-80877 Msa1398450:intron 10.0%
!! AATAATCATTAATTAGTATT+TGG - tig0022253:82699-82718 Msa1398450:intron 10.0%
!! TTCAAAAGATATTTAAAAAA+GGG + tig0022253:82949-82968 None:intergenic 10.0%
!! TTTCAAAAGATATTTAAAAA+AGG + tig0022253:82950-82969 None:intergenic 10.0%
!!! TTTTTAAATATCTTTTGAAA+TGG - tig0022253:82950-82969 Msa1398450:intron 10.0%
!! AAAAATAAAATAAAGTAGAA+GGG + tig0022253:84329-84348 None:intergenic 10.0%
!! AAAAAATAAAATAAAGTAGA+AGG + tig0022253:84330-84349 None:intergenic 10.0%
!! CTCTCAAAAAAATAAAAATT+GGG - tig0022253:79474-79493 Msa1398450:three_prime_UTR 15.0%
!!! TCAAAAACTACAATTAATTT+TGG + tig0022253:80332-80351 None:intergenic 15.0%
!!! AATTTTGAAATATTCAAACT+TGG - tig0022253:80570-80589 Msa1398450:CDS 15.0%
!!! TTTTATTATATCTATGTAAG+TGG + tig0022253:81336-81355 None:intergenic 15.0%
!!! ATTCTTGATATTTGTTATAT+AGG - tig0022253:81751-81770 Msa1398450:intron 15.0%
!! ATATTAAAATTATCTTGTTG+AGG - tig0022253:82151-82170 Msa1398450:intron 15.0%
!!! TTTGAAATATAAACTACTTA+TGG - tig0022253:83074-83093 Msa1398450:five_prime_UTR 15.0%
!!! ATTTTTTTCTTATGTATTTG+AGG - tig0022253:84343-84362 Msa1398450:five_prime_UTR 15.0%
!!! TTTTTTTTAAGGTTTGATGT+TGG + tig0022253:79428-79447 None:intergenic 20.0%
!!! GCTTCTGTTTTTTTTTTTTA+AGG + tig0022253:79439-79458 None:intergenic 20.0%
!!! CCAATTTTTATTTTTTTGAG+AGG + tig0022253:79476-79495 None:intergenic 20.0%
!! CCTCTCAAAAAAATAAAAAT+TGG - tig0022253:79473-79492 Msa1398450:three_prime_UTR 20.0%
!! ATTAATAAGAGATTGTGAAT+TGG + tig0022253:79778-79797 None:intergenic 20.0%
!! TCTTAAATTATTATCTGTGT+TGG - tig0022253:79890-79909 Msa1398450:CDS 20.0%
!!! TACAAATTTTAAGTTCAAGT+TGG - tig0022253:80258-80277 Msa1398450:intron 20.0%
!!! TACAATTAATTTTGGTATGT+AGG + tig0022253:80324-80343 None:intergenic 20.0%
!!! AATTGATTTTTCCTTCAAAA+TGG + tig0022253:80499-80518 None:intergenic 20.0%
!!! AAAATTGATTTTGACATGTT+TGG + tig0022253:80536-80555 None:intergenic 20.0%
!! TAAAAAGGGAAAAAAAGAAA+GGG + tig0022253:80843-80862 None:intergenic 20.0%
!! TTAAAAAGGGAAAAAAAGAA+AGG + tig0022253:80844-80863 None:intergenic 20.0%
!!! TTTTTTTGAACTATGTATGT+TGG - tig0022253:80884-80903 Msa1398450:intron 20.0%
!! AATCATATGCACATATAATT+GGG + tig0022253:81012-81031 None:intergenic 20.0%
!!! TTTTTCCAAAAAGAAAATCT+TGG - tig0022253:81119-81138 Msa1398450:intron 20.0%
!!! TGTAAATATCTTTTGAAATG+AGG - tig0022253:82753-82772 Msa1398450:intron 20.0%
!!! GTAAATATCTTTTGAAATGA+GGG - tig0022253:82754-82773 Msa1398450:intron 20.0%
!!! TAAATATCTTTTGAAATGAG+GGG - tig0022253:82755-82774 Msa1398450:intron 20.0%
!!! AAATATCTTTTGAAATGGTT+TGG - tig0022253:82955-82974 Msa1398450:intron 20.0%
!!! ATATTCTCATGTATTTTCAT+GGG + tig0022253:83489-83508 None:intergenic 20.0%
!!! AATATTCTCATGTATTTTCA+TGG + tig0022253:83490-83509 None:intergenic 20.0%
!!! TTCTAAAATGACAAACAAAT+TGG + tig0022253:83824-83843 None:intergenic 20.0%
!! TAGAATATAAATCAAGTATC+AGG - tig0022253:83839-83858 Msa1398450:intron 20.0%
!! AGAATATAAATCAAGTATCA+GGG - tig0022253:83840-83859 Msa1398450:intron 20.0%
!! GATTTAAATGCATTAGAAAT+GGG - tig0022253:83924-83943 Msa1398450:intron 20.0%
!!! ATGATAATGTCAAGAAATAA+AGG + tig0022253:84036-84055 None:intergenic 20.0%
!! TCAAAATAGCATGTTGATTA+AGG - tig0022253:79990-80009 Msa1398450:CDS 25.0%
!! ATCAATAAATTTGAGTTTGC+AGG - tig0022253:80228-80247 Msa1398450:intron 25.0%
!!! AATTAATTTTGGTATGTAGG+TGG + tig0022253:80321-80340 None:intergenic 25.0%
! TTGACTGTAAAAGTTACATT+TGG - tig0022253:80438-80457 Msa1398450:intron 25.0%
! TTTATGTTTCTTCATTGGAT+TGG - tig0022253:80651-80670 Msa1398450:intron 25.0%
! ATAAGTAATGCTAAGAACTA+TGG - tig0022253:80773-80792 Msa1398450:intron 25.0%
! GATACTGATAGAAACTAAAA+AGG - tig0022253:80908-80927 Msa1398450:intron 25.0%
!! ATACTTGATTTTGCTTGTAT+TGG + tig0022253:80943-80962 None:intergenic 25.0%
! ATCATATGCACATATAATTG+GGG + tig0022253:81011-81030 None:intergenic 25.0%
! CAATCATATGCACATATAAT+TGG + tig0022253:81013-81032 None:intergenic 25.0%
!!! TGGGTTTTGTTTTTTATTTG+TGG - tig0022253:81086-81105 Msa1398450:intron 25.0%
!! TTAGTCCAAGATTTTCTTTT+TGG + tig0022253:81127-81146 None:intergenic 25.0%
! AAAAGAAAATCTTGGACTAA+AGG - tig0022253:81127-81146 Msa1398450:intron 25.0%
!!! AATCACCACATTATTTTGTA+AGG - tig0022253:81225-81244 Msa1398450:CDS 25.0%
! AAACTCCTTACAAAATAATG+TGG + tig0022253:81233-81252 None:intergenic 25.0%
!! GGAGTTTGAGAAAAAATTTT+AGG - tig0022253:81246-81265 Msa1398450:CDS 25.0%
! TAAAACTGAATATCAAATGC+AGG + tig0022253:81300-81319 None:intergenic 25.0%
!!! ACCCACATTTTTTTTCAATA+TGG - tig0022253:81646-81665 Msa1398450:intron 25.0%
! GCCATATTGAAAAAAAATGT+GGG + tig0022253:81650-81669 None:intergenic 25.0%
! AGCCATATTGAAAAAAAATG+TGG + tig0022253:81651-81670 None:intergenic 25.0%
!!! TTTTTCAATATGGCTTCTTA+TGG - tig0022253:81656-81675 Msa1398450:intron 25.0%
! TCAAGATTATTTGCAAAAAG+TGG - tig0022253:82334-82353 Msa1398450:intron 25.0%
!!! AAAAAGTGGACTTTTTTCTT+TGG - tig0022253:82348-82367 Msa1398450:intron 25.0%
!! TAGAAATTTGTGTACTCTTT+TGG + tig0022253:82445-82464 None:intergenic 25.0%
! AATAGTTCCATTAAAACATC+GGG + tig0022253:82503-82522 None:intergenic 25.0%
! GAATAGTTCCATTAAAACAT+CGG + tig0022253:82504-82523 None:intergenic 25.0%
!! TCATAAACATTTCTTTTGCT+AGG - tig0022253:82558-82577 Msa1398450:intron 25.0%
! TGGTACAAATAATTTAACCA+TGG - tig0022253:82975-82994 Msa1398450:intron 25.0%
! ATTCATTATCGTTAAAAGCA+CGG + tig0022253:83052-83071 None:intergenic 25.0%
! GTAACTTATCCTAAATGTTA+CGG + tig0022253:83107-83126 None:intergenic 25.0%
! TATAAAACTTGTGCCATATT+TGG - tig0022253:83331-83350 Msa1398450:intron 25.0%
!! ATTTTCATGGGTATGTAAAA+TGG + tig0022253:83477-83496 None:intergenic 25.0%
! GTATAACTTTGAATCTGAAT+TGG + tig0022253:83718-83737 None:intergenic 25.0%
!! CTTTTCATGTTTGACATATA+GGG + tig0022253:83740-83759 None:intergenic 25.0%
! CTATATGTCAAACATGAAAA+GGG - tig0022253:83739-83758 Msa1398450:five_prime_UTR 25.0%
!!! TCATATCAAGTTTTGAATAG+TGG - tig0022253:83798-83817 Msa1398450:five_prime_UTR 25.0%
! GGATTTAAATGCATTAGAAA+TGG - tig0022253:83923-83942 Msa1398450:intron 25.0%
AAATTGGGATTGTAAGTAAG+AGG - tig0022253:79489-79508 Msa1398450:three_prime_UTR 30.0%
TCAACTTTACAACAACACAA+GGG + tig0022253:79550-79569 None:intergenic 30.0%
TTCAACTTTACAACAACACA+AGG + tig0022253:79551-79570 None:intergenic 30.0%
TGTTGTTGTAAAGTTGAAGA+AGG - tig0022253:79553-79572 Msa1398450:three_prime_UTR 30.0%
CAATATTATTACCGTTGGAT+TGG + tig0022253:79746-79765 None:intergenic 30.0%
AGAAGCAATATTATTACCGT+TGG + tig0022253:79751-79770 None:intergenic 30.0%
AATAAGAGATTGTGAATTGG+AGG + tig0022253:79775-79794 None:intergenic 30.0%
! TTTTGTATAATCATGGGTGT+CGG + tig0022253:79857-79876 None:intergenic 30.0%
CTATGTGTATGCTAATATGA+AGG + tig0022253:79943-79962 None:intergenic 30.0%
AGGAATGTGATTTCTTGTTA+AGG - tig0022253:80010-80029 Msa1398450:intron 30.0%
! CAAGTTAGAATCCATTTTGA+AGG - tig0022253:80485-80504 Msa1398450:intron 30.0%
AACCAAACATACACTTAGAT+GGG - tig0022253:80593-80612 Msa1398450:CDS 30.0%
!! CTTTTGTTATGCTTGTTAAC+TGG - tig0022253:80628-80647 Msa1398450:intron 30.0%
! ACTGGTTTATGTTTCTTCAT+TGG - tig0022253:80646-80665 Msa1398450:intron 30.0%
CCATTTAGACTTAACATCAT+TGG + tig0022253:81046-81065 None:intergenic 30.0%
CCAATGATGTTAAGTCTAAA+TGG - tig0022253:81043-81062 Msa1398450:intron 30.0%
ATATACCATACAGTGTCTAA+TGG - tig0022253:81066-81085 Msa1398450:intron 30.0%
TATACCATACAGTGTCTAAT+GGG - tig0022253:81067-81086 Msa1398450:intron 30.0%
AAGGTACATTGTATTTGCAA+TGG - tig0022253:81146-81165 Msa1398450:intron 30.0%
! TAATGAGTGTTTGTTGAATC+AGG - tig0022253:81493-81512 Msa1398450:CDS 30.0%
ATGGCTTCTTATGGATAAAT+TGG - tig0022253:81665-81684 Msa1398450:intron 30.0%
TAGGTACATTAAGAGTTTAG+AGG - tig0022253:81770-81789 Msa1398450:intron 30.0%
GATAATCAAGACAAACTGAA+AGG + tig0022253:82007-82026 None:intergenic 30.0%
AGTTTGTCTTGATTATCGTT+TGG - tig0022253:82010-82029 Msa1398450:intron 30.0%
TGAATAGAAGAACATAGACT+TGG - tig0022253:82037-82056 Msa1398450:five_prime_UTR 30.0%
! TCTTTAGAAGTATGTATGAC+AGG + tig0022253:82130-82149 None:intergenic 30.0%
AATTATCTTGTTGAGGCATA+TGG - tig0022253:82158-82177 Msa1398450:intron 30.0%
ATTATCTTGTTGAGGCATAT+GGG - tig0022253:82159-82178 Msa1398450:intron 30.0%
AGTCGTTACAATTCATGAAA+AGG + tig0022253:82206-82225 None:intergenic 30.0%
ATGATATTTCCACCTAATAC+TGG + tig0022253:82286-82305 None:intergenic 30.0%
! ATGTTATGAATTTGTTCAGC+AGG - tig0022253:82408-82427 Msa1398450:intron 30.0%
!! TTTTGAACCCGATGTTTTAA+TGG - tig0022253:82493-82512 Msa1398450:intron 30.0%
ATATTTAAAAAAGGGCAACC+CGG + tig0022253:82941-82960 None:intergenic 30.0%
! CAATACTGCATAAACCTTTT+GGG + tig0022253:83004-83023 None:intergenic 30.0%
TGACGCAATGTACTTAAAAA+CGG + tig0022253:83309-83328 None:intergenic 30.0%
AACTTACTGAGTTTATCTAC+TGG + tig0022253:83407-83426 None:intergenic 30.0%
! TCAATTTAGTTTCTCATCGT+AGG - tig0022253:83540-83559 Msa1398450:intron 30.0%
TATTACATACCAAGATTGTG+AGG - tig0022253:83652-83671 Msa1398450:intron 30.0%
! CCTTTTCATGTTTGACATAT+AGG + tig0022253:83741-83760 None:intergenic 30.0%
CCTATATGTCAAACATGAAA+AGG - tig0022253:83738-83757 Msa1398450:five_prime_UTR 30.0%
! AGGAAACTCAAACCTTATTT+CGG + tig0022253:83977-83996 None:intergenic 30.0%
TCACTTGGTACATAAAGATA+AGG - tig0022253:84114-84133 Msa1398450:five_prime_UTR 30.0%
TATGACATGCAGATAATCTA+AGG + tig0022253:84175-84194 None:intergenic 30.0%
ATTATCTGCATGTCATAAGT+TGG - tig0022253:84178-84197 Msa1398450:five_prime_UTR 30.0%
TTATCTGCATGTCATAAGTT+GGG - tig0022253:84179-84198 Msa1398450:five_prime_UTR 30.0%
AATAAAGTAGAAGGGTCAAA+TGG + tig0022253:84321-84340 None:intergenic 30.0%
CAACTTTACAACAACACAAG+GGG + tig0022253:79549-79568 None:intergenic 35.0%
!!! AATTCGAATCTCTGGTTTTG+TGG + tig0022253:79590-79609 None:intergenic 35.0%
CCTATCATAATTCGAATCTC+TGG + tig0022253:79598-79617 None:intergenic 35.0%
CCAGAGATTCGAATTATGAT+AGG - tig0022253:79595-79614 Msa1398450:three_prime_UTR 35.0%
GAGATTCGAATTATGATAGG+AGG - tig0022253:79598-79617 Msa1398450:three_prime_UTR 35.0%
GTGTATGCTAATATGAAGGA+TGG + tig0022253:79939-79958 None:intergenic 35.0%
!! TATGTTATAACGCGTTGACT+TGG - tig0022253:80090-80109 Msa1398450:intron 35.0%
CATTGATAAAGCAGGATTAG+TGG + tig0022253:80117-80136 None:intergenic 35.0%
CCAACTTACATTGATAAAGC+AGG + tig0022253:80125-80144 None:intergenic 35.0%
CCTGCTTTATCAATGTAAGT+TGG - tig0022253:80122-80141 Msa1398450:intron 35.0%
GAACCAAACATACACTTAGA+TGG - tig0022253:80592-80611 Msa1398450:CDS 35.0%
TGATGCAGAGATACTATTTC+TGG - tig0022253:80680-80699 Msa1398450:intron 35.0%
ACCTGTCAGAAAACATATAC+CGG - tig0022253:80722-80741 Msa1398450:intron 35.0%
AAAACCCATTAGACACTGTA+TGG + tig0022253:81074-81093 None:intergenic 35.0%
TCATAGAGAAATGATACCAG+CGG + tig0022253:81522-81541 None:intergenic 35.0%
TGGTATCATTTCTCTATGAG+AGG - tig0022253:81523-81542 Msa1398450:CDS 35.0%
GGTATCATTTCTCTATGAGA+GGG - tig0022253:81524-81543 Msa1398450:CDS 35.0%
GTATCATTTCTCTATGAGAG+GGG - tig0022253:81525-81544 Msa1398450:CDS 35.0%
GTTAGATTAACCTCTTTCTC+AGG + tig0022253:81591-81610 None:intergenic 35.0%
AAAATGTGGGTCAAACAAGA+GGG + tig0022253:81637-81656 None:intergenic 35.0%
AAAAATGTGGGTCAAACAAG+AGG + tig0022253:81638-81657 None:intergenic 35.0%
AATATCCCTACTGAAGAAAG+TGG + tig0022253:81711-81730 None:intergenic 35.0%
CAGTAGGGATATTATCCAAT+TGG - tig0022253:81718-81737 Msa1398450:intron 35.0%
AGAATCACAGTTCTTCCAAT+TGG + tig0022253:81736-81755 None:intergenic 35.0%
CAACAACTACTTATGCTAAG+CGG - tig0022253:81818-81837 Msa1398450:intron 35.0%
TATATGAGCTAATTCGTAGC+AGG + tig0022253:81945-81964 None:intergenic 35.0%
TTGTCTTGATTATCGTTTGG+CGG - tig0022253:82013-82032 Msa1398450:five_prime_UTR 35.0%
GAAGAACATAGACTTGGAAA+TGG - tig0022253:82043-82062 Msa1398450:five_prime_UTR 35.0%
GGTTTCCTAAAACCAGTATT+AGG - tig0022253:82271-82290 Msa1398450:five_prime_UTR 35.0%
TTCCTAAAACCAGTATTAGG+TGG - tig0022253:82274-82293 Msa1398450:five_prime_UTR 35.0%
!!! TTCCACCTAATACTGGTTTT+AGG + tig0022253:82279-82298 None:intergenic 35.0%
AATATCATCGATGCTAGTTG+TGG - tig0022253:82298-82317 Msa1398450:five_prime_UTR 35.0%
!!! TGGACTTTTTTCTTTGGTTG+TGG - tig0022253:82354-82373 Msa1398450:intron 35.0%
ACTACTCAGAGAATATGTTG+AGG - tig0022253:82383-82402 Msa1398450:intron 35.0%
! TTTTGCTAGGAACTTCATCT+TGG - tig0022253:82571-82590 Msa1398450:intron 35.0%
TCGATGGAACTTGAAACAAA+AGG + tig0022253:82620-82639 None:intergenic 35.0%
!!! CTTACCTTGTTTTACACAAG+AGG + tig0022253:82851-82870 None:intergenic 35.0%
CTCTTGTGTAAAACAAGGTA+AGG - tig0022253:82849-82868 Msa1398450:intron 35.0%
TTTAACCATGGTATCCCAAA+AGG - tig0022253:82987-83006 Msa1398450:intron 35.0%
!!! ATAAACCTTTTGGGATACCA+TGG + tig0022253:82995-83014 None:intergenic 35.0%
! GCAATACTGCATAAACCTTT+TGG + tig0022253:83005-83024 None:intergenic 35.0%
GGAAAGTTACCGTAACATTT+AGG - tig0022253:83095-83114 Msa1398450:five_prime_UTR 35.0%
AGTAAGTGAGACAAGCTAAA+CGG + tig0022253:83169-83188 None:intergenic 35.0%
TCAGGTCATGGAAATTATAG+AGG + tig0022253:83194-83213 None:intergenic 35.0%
TGTACTTAAAAACGGAACAG+CGG + tig0022253:83301-83320 None:intergenic 35.0%
!!! GTTTTTAAGTACATTGCGTC+AGG - tig0022253:83308-83327 Msa1398450:intron 35.0%
TAACTTTGTCCTTCAGCTAA+AGG - tig0022253:83573-83592 Msa1398450:intron 35.0%
!! GTGTTATTTCCTTTAGCTGA+AGG + tig0022253:83585-83604 None:intergenic 35.0%
AAAGACAGGTGATATCAGTT+TGG + tig0022253:83678-83697 None:intergenic 35.0%
! GAAATAAGGTTTGAGTTTCC+TGG - tig0022253:83976-83995 Msa1398450:intron 35.0%
ATCATCACTTCACTTGGAAA+AGG - tig0022253:84205-84224 Msa1398450:five_prime_UTR 35.0%
CATTTCTCACACATCATGAA+TGG + tig0022253:84263-84282 None:intergenic 35.0%
ACAGAATTGTGATGAGTTCA+TGG + tig0022253:84380-84399 None:intergenic 35.0%
ACACACACCTTCAACTTCAA+CGG - tig0022253:79513-79532 Msa1398450:three_prime_UTR 40.0%
TTTACAACAACACAAGGGGA+GGG + tig0022253:79545-79564 None:intergenic 40.0%
AGAAGACGAAGTTGAAGCTT+AGG + tig0022253:79688-79707 None:intergenic 40.0%
ATTCCTTGACACCAATCCAA+CGG - tig0022253:79732-79751 Msa1398450:three_prime_UTR 40.0%
! TATTATCTGTGTTGGCGTGT+CGG - tig0022253:79898-79917 Msa1398450:CDS 40.0%
TGTTAAGGATTCCATTGCAG+TGG - tig0022253:80025-80044 Msa1398450:intron 40.0%
TACTAAGAGCAGCAATCCTT+TGG - tig0022253:80058-80077 Msa1398450:intron 40.0%
TAACATACAGGACAAGCCAA+AGG + tig0022253:80077-80096 None:intergenic 40.0%
GTCAACGCGTTATAACATAC+AGG + tig0022253:80089-80108 None:intergenic 40.0%
CACCCATCTAAGTGTATGTT+TGG + tig0022253:80598-80617 None:intergenic 40.0%
CAAACATACACTTAGATGGG+TGG - tig0022253:80596-80615 Msa1398450:CDS 40.0%
! ACCGGTATATGTTTTCTGAC+AGG + tig0022253:80726-80745 None:intergenic 40.0%
! GCGTCAAACCTTTTCTGTAT+GGG - tig0022253:81551-81570 Msa1398450:CDS 40.0%
! CGTCAAACCTTTTCTGTATG+GGG - tig0022253:81552-81571 Msa1398450:CDS 40.0%
AAAACCACCCCATACAGAAA+AGG + tig0022253:81562-81581 None:intergenic 40.0%
TACCTTCCACTTTCTTCAGT+AGG - tig0022253:81702-81721 Msa1398450:intron 40.0%
ACCTTCCACTTTCTTCAGTA+GGG - tig0022253:81703-81722 Msa1398450:intron 40.0%
AAACATCCATGAGCTCTGTT+GGG + tig0022253:81971-81990 None:intergenic 40.0%
! GTTGAGGCATATGGGTTATT+TGG - tig0022253:82167-82186 Msa1398450:intron 40.0%
GTCACTCCTTCTGTTGAATT+CGG - tig0022253:82227-82246 Msa1398450:intron 40.0%
! TTTTTCTTTGGTTGTGGCTC+TGG - tig0022253:82360-82379 Msa1398450:intron 40.0%
TATTCACTTACAGCTGCTGA+TGG + tig0022253:82683-82702 None:intergenic 40.0%
! TTTGAAATGAGGGGTAACCT+TGG - tig0022253:82764-82783 Msa1398450:intron 40.0%
GTTGTTGTCATGTGACTGAA+AGG - tig0022253:82800-82819 Msa1398450:intron 40.0%
ACAGCCTCTTGTGTAAAACA+AGG - tig0022253:82844-82863 Msa1398450:intron 40.0%
CGTACAATACACCAAATGGT+GGG - tig0022253:82875-82894 Msa1398450:intron 40.0%
AGGTTTATGCAGTATTGCGT+TGG - tig0022253:83007-83026 Msa1398450:intron 40.0%
TTTCCATGACCTGATATTGC+AGG - tig0022253:83200-83219 Msa1398450:intron 40.0%
TTTCAGCTACCTGCAATATC+AGG + tig0022253:83212-83231 None:intergenic 40.0%
! ATAAGTCGCATTTTACGACC+TGG - tig0022253:83231-83250 Msa1398450:intron 40.0%
AAAAACGGAACAGCGGTAAA+AGG + tig0022253:83294-83313 None:intergenic 40.0%
TCCAACAAGCATGCCAAATA+TGG + tig0022253:83347-83366 None:intergenic 40.0%
GGCTCATTTGTCTAATAGCT+TGG + tig0022253:83456-83475 None:intergenic 40.0%
CCACGAATGTGAGAGAAAAT+TGG + tig0022253:83607-83626 None:intergenic 40.0%
! CCAATTTTCTCTCACATTCG+TGG - tig0022253:83604-83623 Msa1398450:intron 40.0%
ACCTGTCTTTCAAGCAACAA+AGG - tig0022253:83688-83707 Msa1398450:intron 40.0%
CCTGTCTTTCAAGCAACAAA+GGG - tig0022253:83689-83708 Msa1398450:intron 40.0%
AAGTTCACGTTCAGAGAGAA+AGG + tig0022253:83873-83892 None:intergenic 40.0%
GCAGCAGAAATCATCACAAA+AGG + tig0022253:83950-83969 None:intergenic 40.0%
! GTGTTGATCTGTTAAAAGCG+TGG - tig0022253:84089-84108 Msa1398450:intron 40.0%
! GTTAAAAGCGTGGTTTCACT+TGG - tig0022253:84099-84118 Msa1398450:intron 40.0%
ATCACTTCACTTGGAAAAGG+TGG - tig0022253:84208-84227 Msa1398450:five_prime_UTR 40.0%
CATGATGTGTGAGAAATGTG+AGG - tig0022253:84265-84284 Msa1398450:five_prime_UTR 40.0%
AAAGTAGAAGGGTCAAATGG+AGG + tig0022253:84318-84337 None:intergenic 40.0%
TGATGAGTTCATGGAGTTCA+TGG + tig0022253:84371-84390 None:intergenic 40.0%
TTACAACAACACAAGGGGAG+GGG + tig0022253:79544-79563 None:intergenic 45.0%
CTTTACAACAACACAAGGGG+AGG + tig0022253:79546-79565 None:intergenic 45.0%
!!! AATCTCTGGTTTTGTGGCAG+TGG + tig0022253:79584-79603 None:intergenic 45.0%
CGAAGTTGAAGCTTAGGAGT+GGG + tig0022253:79682-79701 None:intergenic 45.0%
ACGAAGTTGAAGCTTAGGAG+TGG + tig0022253:79683-79702 None:intergenic 45.0%
!! TTACCGTTGGATTGGTGTCA+AGG + tig0022253:79738-79757 None:intergenic 45.0%
ATGTGTGTCTGGACACTTGT+AGG - tig0022253:79822-79841 Msa1398450:intron 45.0%
!! ATAATCATGGGTGTCGGTGT+CGG + tig0022253:79851-79870 None:intergenic 45.0%
AACTTCCTTCTCCACTGCAA+TGG + tig0022253:80039-80058 None:intergenic 45.0%
TTCAAGATGCGTTTGGTCAC+CGG + tig0022253:80744-80763 None:intergenic 45.0%
TCGTGAGTTCAAGATGCGTT+TGG + tig0022253:80751-80770 None:intergenic 45.0%
ATTGGGGCAAAGACTCAGTT+CGG + tig0022253:80995-81014 None:intergenic 45.0%
ATGGCTGTTGCCAAATACAC+CGG - tig0022253:81165-81184 Msa1398450:intron 45.0%
ACTCTTACACTCAACACTGC+CGG + tig0022253:81187-81206 None:intergenic 45.0%
! GGCGTCAAACCTTTTCTGTA+TGG - tig0022253:81550-81569 Msa1398450:CDS 45.0%
! CAAACCTTTTCTGTATGGGG+TGG - tig0022253:81555-81574 Msa1398450:CDS 45.0%
! TTTTCCAGGTCCTGAGAAAG+AGG - tig0022253:81578-81597 Msa1398450:exon 45.0%
TTAACCTCTTTCTCAGGACC+TGG + tig0022253:81585-81604 None:intergenic 45.0%
TCCCTACTGAAGAAAGTGGA+AGG + tig0022253:81707-81726 None:intergenic 45.0%
AACATCCATGAGCTCTGTTG+GGG + tig0022253:81970-81989 None:intergenic 45.0%
GAAACATCCATGAGCTCTGT+TGG + tig0022253:81972-81991 None:intergenic 45.0%
CCCTTCATCTGTTCAAACTG+CGG + tig0022253:82253-82272 None:intergenic 45.0%
CCGCAGTTTGAACAGATGAA+GGG - tig0022253:82250-82269 Msa1398450:intron 45.0%
ATCGATGCTAGTTGTGGAAG+TGG - tig0022253:82304-82323 Msa1398450:five_prime_UTR 45.0%
TCATGTGACTGAAAGGTCAC+AGG - tig0022253:82807-82826 Msa1398450:intron 45.0%
AAGGTCACAGGTTCAAGTCA+TGG - tig0022253:82819-82838 Msa1398450:intron 45.0%
GCTGCGTACAATACACCAAA+TGG - tig0022253:82871-82890 Msa1398450:intron 45.0%
GCGTACAATACACCAAATGG+TGG - tig0022253:82874-82893 Msa1398450:intron 45.0%
CTACCTGCAATATCAGGTCA+TGG + tig0022253:83206-83225 None:intergenic 45.0%
TGTTGCAACCACCTACATAC+TGG - tig0022253:83263-83282 Msa1398450:intron 45.0%
CAACCACCTACATACTGGAT+GGG - tig0022253:83268-83287 Msa1398450:intron 45.0%
AAAAGGCCCATCCAGTATGT+AGG + tig0022253:83277-83296 None:intergenic 45.0%
GCCATATTTGGCATGCTTGT+TGG - tig0022253:83343-83362 Msa1398450:intron 45.0%
AGCTCTACTTACTCTCACTC+AGG + tig0022253:83378-83397 None:intergenic 45.0%
TCAGTTTGGCCTCACAATCT+TGG + tig0022253:83664-83683 None:intergenic 45.0%
! CCCTTTGTTGCTTGAAAGAC+AGG + tig0022253:83692-83711 None:intergenic 45.0%
TGAACTTGAAGCTCTCTGCA+AGG - tig0022253:83886-83905 Msa1398450:intron 45.0%
TCTGCTGCAAAGCCGAAATA+AGG - tig0022253:83962-83981 Msa1398450:intron 45.0%
GGGAAGATCATCACTTCACT+TGG - tig0022253:84199-84218 Msa1398450:five_prime_UTR 45.0%
TACAACAACACAAGGGGAGG+GGG + tig0022253:79543-79562 None:intergenic 50.0%
CACTCCTCATCATGTGTGTC+TGG - tig0022253:79811-79830 Msa1398450:intron 50.0%
GTGTCCAGACACACATGATG+AGG + tig0022253:79818-79837 None:intergenic 50.0%
GGATTCCATTGCAGTGGAGA+AGG - tig0022253:80031-80050 Msa1398450:intron 50.0%
CTGAAAAGCTCAGTGGAAGC+TGG + tig0022253:80809-80828 None:intergenic 50.0%
! CAGCTTCCACTGAGCTTTTC+AGG - tig0022253:80807-80826 Msa1398450:intron 50.0%
TGCATGCCTGAAAAGCTCAG+TGG + tig0022253:80816-80835 None:intergenic 50.0%
CTCAACACTGCCGGTGTATT+TGG + tig0022253:81178-81197 None:intergenic 50.0%
CATTTCTCTATGAGAGGGGC+TGG - tig0022253:81529-81548 Msa1398450:CDS 50.0%
! TCTGTATGGGGTGGTTTTCC+AGG - tig0022253:81564-81583 Msa1398450:CDS 50.0%
TGGGTCAAACAAGAGGGAGT+TGG + tig0022253:81631-81650 None:intergenic 50.0%
ACTTATGCTAAGCGGCGACT+AGG - tig0022253:81826-81845 Msa1398450:intron 50.0%
ATATGCCCCAACAGAGCTCA+TGG - tig0022253:81962-81981 Msa1398450:intron 50.0%
GCCGCAGTTTGAACAGATGA+AGG - tig0022253:82249-82268 Msa1398450:intron 50.0%
! CTTACAGCTGCTGATGGTGA+AGG + tig0022253:82677-82696 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG + tig0022253:82784-82803 None:intergenic 50.0%
! AGTCGCATTTTACGACCTGG+AGG - tig0022253:83234-83253 Msa1398450:intron 50.0%
GTTGCAACAAAGACACCTCC+AGG + tig0022253:83252-83271 None:intergenic 50.0%
GCAACCACCTACATACTGGA+TGG - tig0022253:83267-83286 Msa1398450:intron 50.0%
GGGTGGACCGTTGAAGTTGA+AGG + tig0022253:79523-79542 None:intergenic 55.0%
! GTGAGAAGAAGAAGCGCGTG+GGG + tig0022253:79660-79679 None:intergenic 55.0%
! GGTGAGAAGAAGAAGCGCGT+GGG + tig0022253:79661-79680 None:intergenic 55.0%
TTGTTGAATCAGGACGCCGC+TGG - tig0022253:81503-81522 Msa1398450:CDS 55.0%
CTGCGGCCGAATTCAACAGA+AGG + tig0022253:82236-82255 None:intergenic 55.0%
TCCATCGATGCTGTGCATGC+AGG - tig0022253:82632-82651 Msa1398450:intron 55.0%
! TCCTGCATGCACAGCATCGA+TGG + tig0022253:82636-82655 None:intergenic 55.0%
CAGGAGCAGCTCTTCACTGT+TGG - tig0022253:82651-82670 Msa1398450:intron 55.0%
CTAGAGCTCCCGCATATGCA+GGG + tig0022253:82914-82933 None:intergenic 55.0%
ACTAGAGCTCCCGCATATGC+AGG + tig0022253:82915-82934 None:intergenic 55.0%
AGGCCCATCCAGTATGTAGG+TGG + tig0022253:83274-83293 None:intergenic 55.0%
AAGCTCTCTGCAAGGCGTGT+GGG - tig0022253:83894-83913 Msa1398450:intron 55.0%
AACAACACAAGGGGAGGGGG+TGG + tig0022253:79540-79559 None:intergenic 60.0%
! GGGTGAGAAGAAGAAGCGCG+TGG + tig0022253:79662-79681 None:intergenic 60.0%
GGGGCAAAGACTCAGTTCGG+TGG + tig0022253:80992-81011 None:intergenic 60.0%
GCTAAGCGGCGACTAGGTTG+TGG - tig0022253:81832-81851 Msa1398450:intron 60.0%
AGGGGTAACCTTGGCGCAAC+TGG - tig0022253:82773-82792 Msa1398450:intron 60.0%
CATATGCAGGGTGCGGGAAG+GGG + tig0022253:82902-82921 None:intergenic 60.0%
GCATATGCAGGGTGCGGGAA+GGG + tig0022253:82903-82922 None:intergenic 60.0%
CTTCCCGCACCCTGCATATG+CGG - tig0022253:82902-82921 Msa1398450:intron 60.0%
TTCCCGCACCCTGCATATGC+GGG - tig0022253:82903-82922 Msa1398450:intron 60.0%
! ATGCGGGAGCTCTAGTGCAC+CGG - tig0022253:82919-82938 Msa1398450:intron 60.0%
GAAGCTCTCTGCAAGGCGTG+TGG - tig0022253:83893-83912 Msa1398450:intron 60.0%
CGGGAAGGGGTCCCACCATT+TGG + tig0022253:82889-82908 None:intergenic 65.0%
CGCATATGCAGGGTGCGGGA+AGG + tig0022253:82904-82923 None:intergenic 65.0%
CTCCCGCATATGCAGGGTGC+GGG + tig0022253:82908-82927 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTG+CGG + tig0022253:82909-82928 None:intergenic 65.0%
! TGCGGGAGCTCTAGTGCACC+GGG - tig0022253:82920-82939 Msa1398450:intron 65.0%
TCTCTGCAAGGCGTGTGGGC+TGG - tig0022253:83898-83917 Msa1398450:intron 65.0%
!! AACGCAGCACAGAGAGCGCC+AGG + tig0022253:83997-84016 None:intergenic 65.0%
AAGCGCGTGGGGCGCGTGAA+TGG + tig0022253:79649-79668 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0022253 gene 79423 84437 79423 ID=Msa1398450;Name=Msa1398450
tig0022253 mRNA 79423 84437 79423 ID=Msa1398450-mRNA-1;Parent=Msa1398450;Name=Msa1398450-mRNA-1;_AED=0.26;_eAED=0.26;_QI=724|1|1|1|0.55|0.7|10|363|181
tig0022253 exon 79423 79784 79423 ID=Msa1398450-mRNA-1:exon:16630;Parent=Msa1398450-mRNA-1
tig0022253 exon 79877 80018 79877 ID=Msa1398450-mRNA-1:exon:16629;Parent=Msa1398450-mRNA-1
tig0022253 exon 80531 80638 80531 ID=Msa1398450-mRNA-1:exon:16628;Parent=Msa1398450-mRNA-1
tig0022253 exon 81169 81280 81169 ID=Msa1398450-mRNA-1:exon:16627;Parent=Msa1398450-mRNA-1
tig0022253 exon 81411 81604 81411 ID=Msa1398450-mRNA-1:exon:16626;Parent=Msa1398450-mRNA-1
tig0022253 exon 82013 82087 82013 ID=Msa1398450-mRNA-1:exon:16625;Parent=Msa1398450-mRNA-1
tig0022253 exon 82261 82345 82261 ID=Msa1398450-mRNA-1:exon:16624;Parent=Msa1398450-mRNA-1
tig0022253 exon 83032 83151 83032 ID=Msa1398450-mRNA-1:exon:16623;Parent=Msa1398450-mRNA-1
tig0022253 exon 83725 83828 83725 ID=Msa1398450-mRNA-1:exon:16622;Parent=Msa1398450-mRNA-1
tig0022253 exon 84107 84437 84107 ID=Msa1398450-mRNA-1:exon:16621;Parent=Msa1398450-mRNA-1
tig0022253 five_prime_UTR 84107 84437 84107 ID=Msa1398450-mRNA-1:five_prime_utr;Parent=Msa1398450-mRNA-1
tig0022253 five_prime_UTR 83725 83828 83725 ID=Msa1398450-mRNA-1:five_prime_utr;Parent=Msa1398450-mRNA-1
tig0022253 five_prime_UTR 83032 83151 83032 ID=Msa1398450-mRNA-1:five_prime_utr;Parent=Msa1398450-mRNA-1
tig0022253 five_prime_UTR 82261 82345 82261 ID=Msa1398450-mRNA-1:five_prime_utr;Parent=Msa1398450-mRNA-1
tig0022253 five_prime_UTR 82013 82087 82013 ID=Msa1398450-mRNA-1:five_prime_utr;Parent=Msa1398450-mRNA-1
tig0022253 five_prime_UTR 81596 81604 81596 ID=Msa1398450-mRNA-1:five_prime_utr;Parent=Msa1398450-mRNA-1
tig0022253 CDS 81411 81595 81411 ID=Msa1398450-mRNA-1:cds;Parent=Msa1398450-mRNA-1
tig0022253 CDS 81169 81280 81169 ID=Msa1398450-mRNA-1:cds;Parent=Msa1398450-mRNA-1
tig0022253 CDS 80531 80638 80531 ID=Msa1398450-mRNA-1:cds;Parent=Msa1398450-mRNA-1
tig0022253 CDS 79878 80018 79878 ID=Msa1398450-mRNA-1:cds;Parent=Msa1398450-mRNA-1
tig0022253 three_prime_UTR 79877 79877 79877 ID=Msa1398450-mRNA-1:three_prime_utr;Parent=Msa1398450-mRNA-1
tig0022253 three_prime_UTR 79423 79784 79423 ID=Msa1398450-mRNA-1:three_prime_utr;Parent=Msa1398450-mRNA-1
Gene Sequence

>Msa1398450

ATGAAGGGTTTCCTAAAACCAGTATTAGGTGGAAATATCATCGATGCTAGTTGTGGAAGTGGATTATTTTCAAGATTATTTGCAAAAAGTGGACTTTTTTCTTTGGTTGTGGCTCTGGACTACTCAGAGAATATGTTGAGGCAATGTTATGAATTTGTTCAGCAGGAAGATAACTTTCCAAAAGAGAACTTCATCTTGGTTAGAGCAGACATAGCTAGACTTCCTTTTGTTTCAAGTTCCATCGATGCTGTGCATGCAGGAGCAGCTCTTCACTGTTGGCCTTCACCATCAGCAGCTGTAGCTGAAATAAGTCGCATTTTACGACCTGGAGGTGTCTTTGTTGCAACCACCTACATACTGGATGGGCCTTTTACCGCTGTTCCGTTTTTAAGTACATTGCGTCAGAATATAAATCAAGTATCAGGGATCTATACCTTTCTCTCTGAACGTGAACTTGAAGCTCTCTGCAAGGCGTGTGGGCTGGTCGGATTTAAATGCATTAGAAATGGGCCTTTTGTGATGATTTCTGCTGCAAAGCCGAAATAA

Protein sequence

>Msa1398450

MKGFLKPVLGGNIIDASCGSGLFSRLFAKSGLFSLVVALDYSENMLRQCYEFVQQEDNFPKENFILVRADIARLPFVSSSIDAVHAGAALHCWPSPSAAVAEISRILRPGGVFVATTYILDGPFTAVPFLSTLRQNINQVSGIYTFLSERELEALCKACGLVGFKCIRNGPFVMISAAKPK*