AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0639530


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0639530 MtrunA17_Chr4g0028391 92.531 241 10 3 1 241 2 234 1.34e-163 451
Msa0639530 MtrunA17_Chr8g0390251 32.692 156 69 7 79 230 86 209 1.72e-15 74.7
Msa0639530 MtrunA17_Chr4g0075021 28.662 157 80 5 79 233 17 143 6.29e-13 66.6
Msa0639530 MtrunA17_Chr6g0486631 32.051 156 70 8 79 230 87 210 2.34e-12 65.5
Msa0639530 MtrunA17_Chr2g0288571 30.263 152 74 6 83 232 26 147 4.10e-12 64.3
Msa0639530 MtrunA17_Chr3g0140091 29.677 155 73 7 81 231 91 213 1.07e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0639530 AT1G08110.3 79.894 189 33 1 53 241 2 185 1.14e-106 306
Msa0639530 AT1G08110.2 79.894 189 33 1 53 241 2 185 1.14e-106 306
Msa0639530 AT1G08110.1 79.894 189 33 1 53 241 2 185 1.14e-106 306
Msa0639530 AT1G08110.4 69.565 230 57 4 14 241 17 235 1.16e-106 308
Msa0639530 AT1G67280.2 34.615 156 66 7 79 230 1 124 5.33e-16 75.5
Msa0639530 AT1G67280.1 34.615 156 66 7 79 230 89 212 5.64e-16 76.6
Msa0639530 AT1G11840.5 32.468 154 68 7 81 230 20 141 5.10e-14 69.7
Msa0639530 AT1G11840.6 31.217 189 92 8 48 230 24 180 1.29e-13 69.3
Msa0639530 AT1G11840.4 32.468 154 68 7 81 230 20 141 1.42e-13 68.9
Msa0639530 AT1G11840.1 32.468 154 68 7 81 230 20 141 1.42e-13 68.9
Msa0639530 AT1G11840.3 32.468 154 68 7 81 230 20 141 1.42e-13 68.9
Msa0639530 AT1G11840.2 32.468 154 68 7 81 230 20 141 1.42e-13 68.9

Find 69 sgRNAs with CRISPR-Local

Find 536 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGTTCAGCTTGTACTTTA+TGG 0.231092 4_3:-35742467 Msa0639530:CDS
GAAAGGGATAGCATTTATTA+AGG 0.277714 4_3:-35736745 Msa0639530:CDS
AATTCTGATCCTCGTGGTTT+TGG 0.281200 4_3:-35741817 Msa0639530:intron
TTAAGGATCCTGATGGATAC+TGG 0.291792 4_3:-35736728 Msa0639530:CDS
TAACATGATATGATATTAAA+AGG 0.295916 4_3:+35734947 None:intergenic
AAGTTCAGCTTGTACTTTAT+GGG 0.322056 4_3:-35742466 Msa0639530:CDS
CATCTCGTTGCAGATATAAT+CGG 0.322327 4_3:-35735207 Msa0639530:three_prime_UTR
GTAAAGTAATATACAGTAAC+TGG 0.323998 4_3:-35741882 Msa0639530:CDS
AAATCTTTCACATGCTTTGA+AGG 0.328891 4_3:+35738942 None:intergenic
TAAGATAAACAAACCCCTTC+AGG 0.355776 4_3:-35736654 Msa0639530:intron
GAACCTTTGTGAGAGAGAAA+TGG 0.374001 4_3:+35743867 None:intergenic
GTTTAGTTTGCTTAAGAGAT+TGG 0.379480 4_3:-35742503 Msa0639530:intron
AAAACAATTGGAAATGTAAC+AGG 0.384667 4_3:-35736687 Msa0639530:CDS
AGTTTGGACCTTTGCTCAAA+AGG 0.403037 4_3:-35741983 Msa0639530:CDS
GTTCTATCAACCGAGTTACT+TGG 0.418891 4_3:+35742006 None:intergenic
GAGAGGAAGATGTTGGTGTT+TGG 0.422134 4_3:+35743913 None:intergenic
AACTGTAGATGAAGCTACTA+AGG 0.437049 4_3:-35743686 Msa0639530:CDS
ATTGAAAGAGGAGAGGGGAG+AGG 0.453838 4_3:+35743896 None:intergenic
AACCTTTGTGAGAGAGAAAT+GGG 0.459554 4_3:+35743868 None:intergenic
GGTACTTCTCCAACTCCCTC+AGG 0.460238 4_3:-35735143 Msa0639530:three_prime_UTR
GTAGTCAAAGCAGAATGTTA+AGG 0.464655 4_3:-35735104 Msa0639530:three_prime_UTR
TTGTGATACCCTTTGAACTC+TGG 0.470702 4_3:+35741844 None:intergenic
GAGAGGGGAGAGGAAGATGT+TGG 0.472798 4_3:+35743906 None:intergenic
TCTACAGTTGCATGGAGACC+AGG 0.474404 4_3:+35743700 None:intergenic
AGTATAATTTATTCATCTGT+AGG 0.476016 4_3:+35735007 None:intergenic
ATCTCGTTGCAGATATAATC+GGG 0.480483 4_3:-35735206 Msa0639530:three_prime_UTR
CTTGTACTTTATGGGGTATG+AGG 0.487117 4_3:-35742458 Msa0639530:intron
TCATTCTTCCCTGAGGGAGT+TGG 0.490839 4_3:+35735134 None:intergenic
ACTCGGTTGATAGAACAGTT+TGG 0.493547 4_3:-35741999 Msa0639530:CDS
GAAGGGATTGAAAGAGGAGA+GGG 0.498449 4_3:+35743890 None:intergenic
ATGTGAAAGATTTCAGAACT+TGG 0.499967 4_3:-35738932 Msa0639530:CDS
ATTTCAATCCAGTATCCATC+AGG 0.500386 4_3:+35736720 None:intergenic
TACAAGCTGAACTTCATCTC+AGG 0.504945 4_3:+35742475 None:intergenic
ACTACTTGCTTTGTAAGTCT+CGG 0.506119 4_3:-35735164 Msa0639530:three_prime_UTR
AAAGTGATCCAGAGTTCAAA+GGG 0.513681 4_3:-35741852 Msa0639530:CDS
CGATGAATCGAAGACGAGAA+AGG 0.519494 4_3:+35743936 None:intergenic
AATTATTCATTCTTCCCTGA+GGG 0.528040 4_3:+35735128 None:intergenic
AAATGGGAAGGGATTGAAAG+AGG 0.538715 4_3:+35743884 None:intergenic
AATGGCTGCTTCGGAATCAA+AGG 0.539933 4_3:-35743740 Msa0639530:CDS
TTCGGAATCAAAGGAATCAC+CGG 0.552614 4_3:-35743731 Msa0639530:CDS
TGGAGACCAGGGTTGTTAGC+CGG 0.553858 4_3:+35743712 None:intergenic
TAGCTTCATCTACAGTTGCA+TGG 0.555738 4_3:+35743692 None:intergenic
GAAAGTGATCCAGAGTTCAA+AGG 0.558602 4_3:-35741853 Msa0639530:CDS
TGTGAAAGATTTCAGAACTT+GGG 0.559970 4_3:-35738931 Msa0639530:CDS
GCATTTATTAAGGATCCTGA+TGG 0.563476 4_3:-35736735 Msa0639530:CDS
AGTTCAGCTTGTACTTTATG+GGG 0.564812 4_3:-35742465 Msa0639530:CDS
TTCCCATTTCTCTCTCACAA+AGG 0.566022 4_3:-35743870 Msa0639530:intron
AAGGGATTGAAAGAGGAGAG+GGG 0.572888 4_3:+35743891 None:intergenic
CTCTCATCTTCAAAATCACA+AGG 0.581280 4_3:-35744020 Msa0639530:five_prime_UTR
GAATCACCGGCTAACAACCC+TGG 0.584889 4_3:-35743718 Msa0639530:CDS
CTTATGTTTACAGGACACAT+TGG 0.591800 4_3:-35738982 Msa0639530:intron
AACTACAGTCTCTACCTGAA+GGG 0.592876 4_3:+35736640 None:intergenic
ATCTGAAGCTCCAAGTAACT+CGG 0.594666 4_3:-35742016 Msa0639530:CDS
GGAAGGGATTGAAAGAGGAG+AGG 0.596991 4_3:+35743889 None:intergenic
AAAATCTACTATATATTACA+AGG 0.601809 4_3:+35735046 None:intergenic
TAAAGTAATATACAGTAACT+GGG 0.605451 4_3:-35741881 Msa0639530:CDS
TTGTGAGAGAGAAATGGGAA+GGG 0.605485 4_3:+35743873 None:intergenic
TTTGTGAGAGAGAAATGGGA+AGG 0.618152 4_3:+35743872 None:intergenic
TTTGTTAAGAAACCAGAGGA+TGG 0.620597 4_3:-35738901 Msa0639530:intron
GTACTTCTCCAACTCCCTCA+GGG 0.620744 4_3:-35735142 Msa0639530:three_prime_UTR
ACTGTAGATGAAGCTACTAA+GGG 0.621301 4_3:-35743685 Msa0639530:CDS
CTACAGTTGCATGGAGACCA+GGG 0.624177 4_3:+35743701 None:intergenic
ACTACAGTCTCTACCTGAAG+GGG 0.624797 4_3:+35736641 None:intergenic
AAATTATTCATTCTTCCCTG+AGG 0.639236 4_3:+35735127 None:intergenic
TGAGTTTGTTAAGAAACCAG+AGG 0.656268 4_3:-35738905 Msa0639530:CDS
GAGTTCAAAGGGTATCACAA+TGG 0.683137 4_3:-35741841 Msa0639530:CDS
AATGGCAATTCTGATCCTCG+TGG 0.690634 4_3:-35741823 Msa0639530:CDS
AAAGTAATATACAGTAACTG+GGG 0.707954 4_3:-35741880 Msa0639530:CDS
TATCACTTACCAAAACCACG+AGG 0.836687 4_3:+35741808 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATTAAAAAATTTAATA+AGG - chr4_3:35739375-35739394 Msa0639530:intron 0.0%
!!! GGTATAATAATTTTAAATTT+AGG + chr4_3:35737957-35737976 None:intergenic 10.0%
!! AAAAAACTAAAACATTTAAA+AGG + chr4_3:35738216-35738235 None:intergenic 10.0%
!!! TATTTTTAAAATTACAGTTT+TGG + chr4_3:35738270-35738289 None:intergenic 10.0%
!! AATATTTCAAAAGATATATA+TGG + chr4_3:35738584-35738603 None:intergenic 10.0%
!!! TTTGATCTTTTATTTTAAAA+GGG + chr4_3:35739351-35739370 None:intergenic 10.0%
!!! TTTTAAAATAAAAGATCAAA+CGG - chr4_3:35739351-35739370 Msa0639530:intron 10.0%
!!! TTTTTAAAGTAATAGTTTAA+AGG + chr4_3:35739584-35739603 None:intergenic 10.0%
!! TATAAATAAAAGTTAATTAC+AGG + chr4_3:35739781-35739800 None:intergenic 10.0%
!! ATATATGAATGGAAAAAAAA+GGG + chr4_3:35735294-35735313 None:intergenic 15.0%
!! AATATATGAATGGAAAAAAA+AGG + chr4_3:35735295-35735314 None:intergenic 15.0%
!! TGGAATTATAAATATATGAA+TGG + chr4_3:35735305-35735324 None:intergenic 15.0%
!! AAATAAAAGAAAATTACTAC+AGG - chr4_3:35737700-35737719 Msa0639530:intron 15.0%
!! AATAAAAGAAAATTACTACA+GGG - chr4_3:35737701-35737720 Msa0639530:intron 15.0%
!! TTATGATATATAATCTCTTT+AGG - chr4_3:35737908-35737927 Msa0639530:intron 15.0%
!!! TTTTGAATTTTTTAGTTTTG+GGG + chr4_3:35738241-35738260 None:intergenic 15.0%
!!! GTTTTGAATTTTTTAGTTTT+GGG + chr4_3:35738242-35738261 None:intergenic 15.0%
!!! TGTTTTGAATTTTTTAGTTT+TGG + chr4_3:35738243-35738262 None:intergenic 15.0%
!! TGAAAAAAAAGGTTAATATA+AGG + chr4_3:35738476-35738495 None:intergenic 15.0%
!! ATATAAACAGAGATTATTAA+GGG - chr4_3:35738806-35738825 Msa0639530:intron 15.0%
!!! GTTTGATCTTTTATTTTAAA+AGG + chr4_3:35739352-35739371 None:intergenic 15.0%
!!! AACTCTAAATTTTTTCTTTT+CGG + chr4_3:35739507-35739526 None:intergenic 15.0%
!!! AAAGAAAAAATTTAGAGTTA+TGG - chr4_3:35739508-35739527 Msa0639530:intron 15.0%
!!! AAGAAAAAATTTAGAGTTAT+GGG - chr4_3:35739509-35739528 Msa0639530:intron 15.0%
!!! CATTTTTATAGATATTTCAA+GGG - chr4_3:35740246-35740265 Msa0639530:intron 15.0%
!!! ATATAGAAATTGATTTTGAT+GGG - chr4_3:35741978-35741997 Msa0639530:CDS 15.0%
!! AAAACATGTATAAGTAAATA+AGG + chr4_3:35742329-35742348 None:intergenic 15.0%
!!! ACAAATTAATATAGTTTTGA+TGG + chr4_3:35743220-35743239 None:intergenic 15.0%
!! AAAATGAGAAAAAAAATTGT+AGG - chr4_3:35743417-35743436 Msa0639530:intron 15.0%
!! AAATGAGAAAAAAAATTGTA+GGG - chr4_3:35743418-35743437 Msa0639530:intron 15.0%
!! AAAATCTACTATATATTACA+AGG + chr4_3:35743887-35743906 None:intergenic 15.0%
!! TAACATGATATGATATTAAA+AGG + chr4_3:35743986-35744005 None:intergenic 15.0%
!! AACTTATTTATTTGCATAAG+AGG - chr4_3:35735590-35735609 Msa0639530:intron 20.0%
!!! AAAACAATTTGACTGTATTT+TGG + chr4_3:35735658-35735677 None:intergenic 20.0%
!! TTTAATAATCCGTAATATAC+AGG - chr4_3:35736029-35736048 Msa0639530:intron 20.0%
!!! CATTTTTTAAGACCTTTAAA+TGG - chr4_3:35736633-35736652 Msa0639530:intron 20.0%
!!! TTTTCATAGTTACCATTTAA+AGG + chr4_3:35736648-35736667 None:intergenic 20.0%
!! AATATGTGTAATTAATGCAT+TGG - chr4_3:35736666-35736685 Msa0639530:exon 20.0%
!!! TATGAAATAACTTCTTCTTT+TGG - chr4_3:35736712-35736731 Msa0639530:CDS 20.0%
!! TCCATTAAAATAAAACTACT+CGG + chr4_3:35736848-35736867 None:intergenic 20.0%
!! TAAAGTAATATACAGTAACT+GGG - chr4_3:35737049-35737068 Msa0639530:intron 20.0%
!! ATAAGAGAAACTATTAAGAA+AGG - chr4_3:35737331-35737350 Msa0639530:intron 20.0%
!! TTAAATATCTTTGATGAGAT+TGG + chr4_3:35737680-35737699 None:intergenic 20.0%
!! ACAAAATGAAAACAAAGTAA+AGG + chr4_3:35737884-35737903 None:intergenic 20.0%
!! AAACAAAAACAATTTCAAAC+AGG + chr4_3:35738151-35738170 None:intergenic 20.0%
!!! GTTTTTAATATTATGTTTGC+TGG - chr4_3:35738318-35738337 Msa0639530:intron 20.0%
!! GATATAAACAGAGATTATTA+AGG - chr4_3:35738805-35738824 Msa0639530:intron 20.0%
!! TCAGTATGACTTATAATTAA+TGG + chr4_3:35739230-35739249 None:intergenic 20.0%
!! TAAATGATAAATGTGTAAAG+TGG + chr4_3:35739429-35739448 None:intergenic 20.0%
!! CTTTACACATTTATCATTTA+TGG - chr4_3:35739429-35739448 Msa0639530:intron 20.0%
!!! TTATGTCTATCAACATTTTT+GGG + chr4_3:35739702-35739721 None:intergenic 20.0%
!!! ATTATGTCTATCAACATTTT+TGG + chr4_3:35739703-35739722 None:intergenic 20.0%
!! TTCATTATGAAATGAAAACT+AGG + chr4_3:35739754-35739773 None:intergenic 20.0%
!! ATATATCCAATAAATAACTG+TGG + chr4_3:35739868-35739887 None:intergenic 20.0%
!! ACTAAAAAAAACATAACAGA+TGG + chr4_3:35740197-35740216 None:intergenic 20.0%
!! CCTTGAAATATCTATAAAAA+TGG + chr4_3:35740248-35740267 None:intergenic 20.0%
!!! CCATTTTTATAGATATTTCA+AGG - chr4_3:35740245-35740264 Msa0639530:intron 20.0%
!!! CGAAAAAGTTTTTTAAAAAG+AGG + chr4_3:35740495-35740514 None:intergenic 20.0%
!! TTGAAATCAAATGACTTTAT+AGG - chr4_3:35740540-35740559 Msa0639530:intron 20.0%
!! AATGATAATAGAATAAGCAA+TGG - chr4_3:35740579-35740598 Msa0639530:intron 20.0%
!! AAGTTAATCTCTAATATGAA+AGG - chr4_3:35740783-35740802 Msa0639530:intron 20.0%
!! ATGTTTACAATAGTTGATTA+AGG - chr4_3:35741030-35741049 Msa0639530:intron 20.0%
!!! TCGAAGCAAATTTTATAAAA+GGG + chr4_3:35741726-35741745 None:intergenic 20.0%
!!! TTCGAAGCAAATTTTATAAA+AGG + chr4_3:35741727-35741746 None:intergenic 20.0%
!!! CATATAGAAATTGATTTTGA+TGG - chr4_3:35741977-35741996 Msa0639530:CDS 20.0%
!!! CTTTTAGAACTTTATTTTGA+TGG - chr4_3:35742015-35742034 Msa0639530:CDS 20.0%
!!! TTCAATTTATTTGTTTTTGC+AGG - chr4_3:35742156-35742175 Msa0639530:intron 20.0%
!! TGTATAAGTAAATAAGGTAA+GGG + chr4_3:35742323-35742342 None:intergenic 20.0%
!! ATGTATAAGTAAATAAGGTA+AGG + chr4_3:35742324-35742343 None:intergenic 20.0%
!! ATGTTAGAGAATATAATGTA+AGG + chr4_3:35742373-35742392 None:intergenic 20.0%
!! ACATTATATTCTCTAACATA+AGG - chr4_3:35742374-35742393 Msa0639530:intron 20.0%
!! ATGCATATAACAAACTAATT+TGG + chr4_3:35742474-35742493 None:intergenic 20.0%
!! ATGCTTATAACAAACTAATT+TGG + chr4_3:35742504-35742523 None:intergenic 20.0%
!! TATTGTACTTTGTTAGATTA+AGG - chr4_3:35742623-35742642 Msa0639530:intron 20.0%
!!! AGAAATATTGTAGTAGTTTT+GGG + chr4_3:35742717-35742736 None:intergenic 20.0%
!! TTAACTCATTATATAGCATA+TGG + chr4_3:35743304-35743323 None:intergenic 20.0%
!!! AACTAAAACAGTGTTTTATA+TGG + chr4_3:35743340-35743359 None:intergenic 20.0%
!!! TTTTGGTTATTATAAAATCG+CGG + chr4_3:35743459-35743478 None:intergenic 20.0%
!!! ATTGAAGTTAAATGTGTTTT+TGG + chr4_3:35743476-35743495 None:intergenic 20.0%
!! AGTATAATTTATTCATCTGT+AGG + chr4_3:35743926-35743945 None:intergenic 20.0%
! AATAAACTTAGAACATGAAG+AGG + chr4_3:35735111-35735130 None:intergenic 25.0%
! ATAAAAGATAAATGACCTGT+TGG - chr4_3:35735426-35735445 Msa0639530:intron 25.0%
! CAAAAATAAGCTAAACCAAA+CGG - chr4_3:35735630-35735649 Msa0639530:intron 25.0%
!!! TATGTTTGTTACAGTTTTCT+CGG - chr4_3:35735745-35735764 Msa0639530:intron 25.0%
! TTTGAAAATCTGTAACAAAC+AGG + chr4_3:35735804-35735823 None:intergenic 25.0%
! TAAAAATCAAGGCTAACTTT+GGG + chr4_3:35736231-35736250 None:intergenic 25.0%
! ATAAAAATCAAGGCTAACTT+TGG + chr4_3:35736232-35736251 None:intergenic 25.0%
! TTGTAACACTTATATTCTGT+TGG - chr4_3:35736295-35736314 Msa0639530:intron 25.0%
!!! TGGATTGGCAATATAAATTT+AGG - chr4_3:35736585-35736604 Msa0639530:intron 25.0%
!! GGATTGGCAATATAAATTTA+GGG - chr4_3:35736586-35736605 Msa0639530:intron 25.0%
! TAACATATGAAGTATGAACA+TGG + chr4_3:35736809-35736828 None:intergenic 25.0%
! CCATTAAAATAAAACTACTC+GGG + chr4_3:35736847-35736866 None:intergenic 25.0%
! GTAAAGTAATATACAGTAAC+TGG - chr4_3:35737048-35737067 Msa0639530:intron 25.0%
! AAAGTAATATACAGTAACTG+GGG - chr4_3:35737050-35737069 Msa0639530:intron 25.0%
! CTGTAATGACATTGTTAATT+AGG - chr4_3:35737464-35737483 Msa0639530:intron 25.0%
! CATCATATGATACAAATCAA+TGG + chr4_3:35737539-35737558 None:intergenic 25.0%
! GAGATTGGTAAAAGAAAAAT+TGG + chr4_3:35737665-35737684 None:intergenic 25.0%
! ATATAATCTCTTTAGGCTTA+TGG - chr4_3:35737915-35737934 Msa0639530:intron 25.0%
! AACCAGCAAACATAATATTA+AGG - chr4_3:35738124-35738143 Msa0639530:intron 25.0%
! ACCAGCAAACATAATATTAA+GGG - chr4_3:35738125-35738144 Msa0639530:intron 25.0%
! TATATGAACGCAAGAATAAT+AGG + chr4_3:35738382-35738401 None:intergenic 25.0%
!!! GTCAAATTGGTTTTTGTAAA+TGG - chr4_3:35738545-35738564 Msa0639530:intron 25.0%
!!! TTTTTCTCTGTTTTTTTGCT+TGG + chr4_3:35738844-35738863 None:intergenic 25.0%
! AAGCAAAAAAACAGAGAAAA+AGG - chr4_3:35738843-35738862 Msa0639530:intron 25.0%
! TCAGTATGATTTACAATTCA+TGG + chr4_3:35739151-35739170 None:intergenic 25.0%
! CAATGTAATAGTTGTATATG+AGG - chr4_3:35739188-35739207 Msa0639530:intron 25.0%
!!! CTTATTGGTTGTTTTCATTT+TGG + chr4_3:35739536-35739555 None:intergenic 25.0%
! ATGAAAACAACCAATAAGTT+AGG - chr4_3:35739538-35739557 Msa0639530:intron 25.0%
! TGAAAACAACCAATAAGTTA+GGG - chr4_3:35739539-35739558 Msa0639530:intron 25.0%
! ACTGATTAATAATAGTGATG+AGG + chr4_3:35739648-35739667 None:intergenic 25.0%
!! TATGTCTATCAACATTTTTG+GGG + chr4_3:35739701-35739720 None:intergenic 25.0%
!! ATGATATTTCCATTTTACTC+TGG - chr4_3:35739725-35739744 Msa0639530:intron 25.0%
!! TGTGTTATTCATTACCTTAT+TGG - chr4_3:35739889-35739908 Msa0639530:intron 25.0%
!! GTGTTATTCATTACCTTATT+GGG - chr4_3:35739890-35739909 Msa0639530:intron 25.0%
!! TAAAAATGGATTTCATCATG+TGG + chr4_3:35740234-35740253 None:intergenic 25.0%
!!! TGAAATAGTTATTGGTTTTG+TGG + chr4_3:35740685-35740704 None:intergenic 25.0%
!!! GTTTGGTTTGAAATAGTTAT+TGG + chr4_3:35740693-35740712 None:intergenic 25.0%
!! TTAAAGTTGTTTCGTTTCTT+GGG + chr4_3:35740741-35740760 None:intergenic 25.0%
!! ATTAAAGTTGTTTCGTTTCT+TGG + chr4_3:35740742-35740761 None:intergenic 25.0%
!! ATTTGAGATCTAGATTGTTA+GGG + chr4_3:35741351-35741370 None:intergenic 25.0%
! TTAATGAATGATAGAATGAG+AGG - chr4_3:35741462-35741481 Msa0639530:intron 25.0%
! TATATATAGGTGAACAAGTT+GGG - chr4_3:35741492-35741511 Msa0639530:intron 25.0%
!!! TTCGTTCTGTTATGTTTTTT+CGG - chr4_3:35741811-35741830 Msa0639530:intron 25.0%
! CATTAGCAGTTAACATTAAA+GGG + chr4_3:35742075-35742094 None:intergenic 25.0%
!! TTTTTGCAGGAAAAATGAAA+GGG - chr4_3:35742169-35742188 Msa0639530:intron 25.0%
!! TTACATTTCCAATTGTTTTC+CGG + chr4_3:35742242-35742261 None:intergenic 25.0%
! AAAACAATTGGAAATGTAAC+AGG - chr4_3:35742243-35742262 Msa0639530:intron 25.0%
! ATAAAGACAATCTTACTTCA+GGG + chr4_3:35742558-35742577 None:intergenic 25.0%
! AATAAAGACAATCTTACTTC+AGG + chr4_3:35742559-35742578 None:intergenic 25.0%
! TTAACTTACTAATGATCCAA+GGG + chr4_3:35742598-35742617 None:intergenic 25.0%
!! ACTTACGTTTAATCTAAAGT+TGG - chr4_3:35742661-35742680 Msa0639530:intron 25.0%
! CATCAAAATAGAAAATCATG+TGG + chr4_3:35742690-35742709 None:intergenic 25.0%
!!! CACATGATTTTCTATTTTGA+TGG - chr4_3:35742688-35742707 Msa0639530:CDS 25.0%
!! GAGAAATATTGTAGTAGTTT+TGG + chr4_3:35742718-35742737 None:intergenic 25.0%
! AAACATGTGCTTATATAAGT+GGG + chr4_3:35742820-35742839 None:intergenic 25.0%
! TAAACATGTGCTTATATAAG+TGG + chr4_3:35742821-35742840 None:intergenic 25.0%
! ACTTATATAAGCACATGTTT+AGG - chr4_3:35742820-35742839 Msa0639530:intron 25.0%
! AACAGAAAAAGTTTATTCTC+TGG - chr4_3:35743190-35743209 Msa0639530:intron 25.0%
!! AATATTTTCTGTAACCAAGT+AGG - chr4_3:35743244-35743263 Msa0639530:intron 25.0%
! GCATCATCATAATGATTTAA+TGG - chr4_3:35743551-35743570 Msa0639530:intron 25.0%
!! ATTCTTTTTCCTCAAATCAA+TGG - chr4_3:35743580-35743599 Msa0639530:intron 25.0%
ATCGATGAAAAGCGATTAAT+TGG + chr4_3:35735088-35735107 None:intergenic 30.0%
! TCGATTTCGATTTTTCTCAA+TGG - chr4_3:35735172-35735191 Msa0639530:three_prime_UTR 30.0%
TAATTCCACTTATGCATGTT+TGG - chr4_3:35735317-35735336 Msa0639530:intron 30.0%
TTAATCCAAACATGCATAAG+TGG + chr4_3:35735325-35735344 None:intergenic 30.0%
AAAAAATAAGCCAATCCAAC+AGG + chr4_3:35735444-35735463 None:intergenic 30.0%
! AGATACTATTTTCGTTAGTG+AGG - chr4_3:35735548-35735567 Msa0639530:intron 30.0%
AACTTAGCACCTGTATATTA+CGG + chr4_3:35736041-35736060 None:intergenic 30.0%
! TAACCACTTGTTAGAGTATT+TGG + chr4_3:35736080-35736099 None:intergenic 30.0%
GCAAACAATAACAGTCATAA+GGG + chr4_3:35736153-35736172 None:intergenic 30.0%
TGCAAACAATAACAGTCATA+AGG + chr4_3:35736154-35736173 None:intergenic 30.0%
AAAAATCAAGGCTAACTTTG+GGG + chr4_3:35736230-35736249 None:intergenic 30.0%
AAACGCGAGAATAAAAATCA+AGG + chr4_3:35736242-35736261 None:intergenic 30.0%
! TGATTTTTATTCTCGCGTTT+TGG - chr4_3:35736242-35736261 Msa0639530:intron 30.0%
! GATTTTTATTCTCGCGTTTT+GGG - chr4_3:35736243-35736262 Msa0639530:intron 30.0%
!! GTTTAGTTTGCTTAAGAGAT+TGG - chr4_3:35736427-35736446 Msa0639530:intron 30.0%
AAGTTCAGCTTGTACTTTAT+GGG - chr4_3:35736464-35736483 Msa0639530:intron 30.0%
!!! CCCGAGTAGTTTTATTTTAA+TGG - chr4_3:35736844-35736863 Msa0639530:intron 30.0%
!! GTTGCATCTTTTTCTTGTTT+AGG - chr4_3:35736887-35736906 Msa0639530:intron 30.0%
TTGGTAAGTGATATCTCATT+TGG - chr4_3:35737132-35737151 Msa0639530:intron 30.0%
TTTAATAGCATGTAGAGACT+CGG - chr4_3:35737202-35737221 Msa0639530:intron 30.0%
GACTTGTAGATTATGTAGTA+AGG - chr4_3:35737253-35737272 Msa0639530:intron 30.0%
! AGTAAGGAGAGTATATTAGA+TGG - chr4_3:35737269-35737288 Msa0639530:intron 30.0%
AGGTCTATAGATTAATGAGT+TGG - chr4_3:35737351-35737370 Msa0639530:intron 30.0%
! AAGTCTTTTACCATTAAGTG+GGG + chr4_3:35737430-35737449 None:intergenic 30.0%
! CAAGTCTTTTACCATTAAGT+GGG + chr4_3:35737431-35737450 None:intergenic 30.0%
! TCAAGTCTTTTACCATTAAG+TGG + chr4_3:35737432-35737451 None:intergenic 30.0%
CATATATGAATTGCACGATT+CGG - chr4_3:35737617-35737636 Msa0639530:intron 30.0%
ATCAGTCATTTCCTCATATA+CGG - chr4_3:35737816-35737835 Msa0639530:intron 30.0%
CTAACACTACACACTTTATT+TGG - chr4_3:35737853-35737872 Msa0639530:intron 30.0%
TCACAATTCAGAAGTTAGTT+TGG - chr4_3:35738048-35738067 Msa0639530:intron 30.0%
TTCTTGCGTTCATATATTGT+TGG - chr4_3:35738386-35738405 Msa0639530:intron 30.0%
TTCATATATTGTTGGAGTCT+TGG - chr4_3:35738394-35738413 Msa0639530:intron 30.0%
TGTCACGTGTATGAAAAAAA+AGG + chr4_3:35738487-35738506 None:intergenic 30.0%
ATTTGACAGTTTCTGTTTAG+AGG + chr4_3:35738532-35738551 None:intergenic 30.0%
CTAAACAGAAACTGTCAAAT+TGG - chr4_3:35738532-35738551 Msa0639530:intron 30.0%
TTGTAAATGGTGAATTTAGC+AGG - chr4_3:35738558-35738577 Msa0639530:intron 30.0%
TTTCAAAAGTCAATGTAGTC+AGG - chr4_3:35738619-35738638 Msa0639530:intron 30.0%
TTTCAAAAGTCAATGTAGTC+AGG - chr4_3:35738619-35738638 Msa0639530:intron 30.0%
AGATTATTAAGGGAAAACAG+AGG - chr4_3:35738816-35738835 Msa0639530:intron 30.0%
CAAAAAAACAGAGAAAAAGG+AGG - chr4_3:35738846-35738865 Msa0639530:intron 30.0%
!! AACATTTCCTTAGTTGGTTT+TGG - chr4_3:35739042-35739061 Msa0639530:intron 30.0%
TATCATACCAAAACCAACTA+AGG + chr4_3:35739052-35739071 None:intergenic 30.0%
GATACGCATTATTCTAAGTT+CGG - chr4_3:35739068-35739087 Msa0639530:intron 30.0%
TTATTCTAAGTTCGGTTTCT+AGG - chr4_3:35739076-35739095 Msa0639530:intron 30.0%
!!! TTATTTTAAAAGGGAGCCAT+TGG + chr4_3:35739342-35739361 None:intergenic 30.0%
ATGGTTAAAGTTAACAGACT+CGG - chr4_3:35739448-35739467 Msa0639530:intron 30.0%
GAAAACAACCAATAAGTTAG+GGG - chr4_3:35739540-35739559 Msa0639530:intron 30.0%
CTCTTTCCACAGTTATTTAT+TGG - chr4_3:35739859-35739878 Msa0639530:intron 30.0%
AAATCTTTCACATGCTTTGA+AGG + chr4_3:35739991-35740010 None:intergenic 30.0%
ATGTGAAAGATTTCAGAACT+TGG - chr4_3:35739998-35740017 Msa0639530:intron 30.0%
TGTGAAAGATTTCAGAACTT+GGG - chr4_3:35739999-35740018 Msa0639530:intron 30.0%
TAAAAAAAGTTACCATCCTC+TGG + chr4_3:35740044-35740063 None:intergenic 30.0%
!! ATATGATTTGTTTGCCTACA+TGG - chr4_3:35740171-35740190 Msa0639530:intron 30.0%
TTTAAGTAGTGTGAAACTTG+AGG - chr4_3:35740297-35740316 Msa0639530:intron 30.0%
! GGAATCTAATTCTAGAAACA+TGG - chr4_3:35740322-35740341 Msa0639530:intron 30.0%
! TAGAAACATGGTTTAGAGTT+AGG - chr4_3:35740334-35740353 Msa0639530:intron 30.0%
!!! AAAAAACTTTTTCGAAAGCG+TGG - chr4_3:35740501-35740520 Msa0639530:intron 30.0%
GGCACAATAACAATTCAAAT+TGG - chr4_3:35740600-35740619 Msa0639530:intron 30.0%
! TTCTTGTTTAAGGTTAGGTT+TGG + chr4_3:35740710-35740729 None:intergenic 30.0%
! GTGATTTCTTGTTTAAGGTT+AGG + chr4_3:35740715-35740734 None:intergenic 30.0%
! GGATAGTGATTTCTTGTTTA+AGG + chr4_3:35740720-35740739 None:intergenic 30.0%
CAACAATGTTCTTGACAATT+AGG - chr4_3:35740823-35740842 Msa0639530:intron 30.0%
AGAGTAAGAAAAAGAGAACA+TGG - chr4_3:35740912-35740931 Msa0639530:intron 30.0%
AAGAGAACATGGATTTATAG+AGG - chr4_3:35740923-35740942 Msa0639530:intron 30.0%
CATGGTGATTCATAAATTGA+AGG + chr4_3:35741058-35741077 None:intergenic 30.0%
TTACATAGTGTAGAAGGTTT+AGG + chr4_3:35741083-35741102 None:intergenic 30.0%
ATTTCAAAGAGCTTGAAGAT+TGG + chr4_3:35741120-35741139 None:intergenic 30.0%
!! ATCTTCAAGCTCTTTGAAAT+TGG - chr4_3:35741120-35741139 Msa0639530:intron 30.0%
TTCTTGGGAAAGAAGATTAA+AGG + chr4_3:35741184-35741203 None:intergenic 30.0%
CATAGCAAAGAAGATTTCTT+GGG + chr4_3:35741199-35741218 None:intergenic 30.0%
ACATAGCAAAGAAGATTTCT+TGG + chr4_3:35741200-35741219 None:intergenic 30.0%
! ATTCAAGGATCTAAAGCAAA+AGG + chr4_3:35741299-35741318 None:intergenic 30.0%
CTATAGGATAATTGTAAGCT+TGG + chr4_3:35741326-35741345 None:intergenic 30.0%
! GATTTGAGATCTAGATTGTT+AGG + chr4_3:35741352-35741371 None:intergenic 30.0%
!! CTTTTTCTAAGAACACCTAT+GGG + chr4_3:35741374-35741393 None:intergenic 30.0%
!! ACTTTTTCTAAGAACACCTA+TGG + chr4_3:35741375-35741394 None:intergenic 30.0%
CTATATATAGGTGAACAAGT+TGG - chr4_3:35741491-35741510 Msa0639530:intron 30.0%
ACACTGATGATTCAAATCAA+AGG + chr4_3:35741541-35741560 None:intergenic 30.0%
AATTCGAATCAATCTTCATC+TGG + chr4_3:35741633-35741652 None:intergenic 30.0%
GAAACAATAGACAAACTAAC+CGG - chr4_3:35741744-35741763 Msa0639530:intron 30.0%
AAACAATAGACAAACTAACC+GGG - chr4_3:35741745-35741764 Msa0639530:intron 30.0%
!! TTCTATTAGGGATGTCATTT+TGG - chr4_3:35741951-35741970 Msa0639530:intron 30.0%
CCATTAGCAGTTAACATTAA+AGG + chr4_3:35742076-35742095 None:intergenic 30.0%
CCTTTAATGTTAACTGCTAA+TGG - chr4_3:35742073-35742092 Msa0639530:intron 30.0%
! GTTTTTGCAGGAAAAATGAA+AGG - chr4_3:35742168-35742187 Msa0639530:intron 30.0%
GAAAGGGATAGCATTTATTA+AGG - chr4_3:35742185-35742204 Msa0639530:intron 30.0%
! ACTGGATTGAAATTTTTGAC+CGG - chr4_3:35742220-35742239 Msa0639530:intron 30.0%
! ATTTTTGACCGGAAAACAAT+TGG - chr4_3:35742231-35742250 Msa0639530:intron 30.0%
AGTAAATAAGGTAAGGGAAT+TGG + chr4_3:35742317-35742336 None:intergenic 30.0%
TAAGGAAAACATTACACTCA+GGG + chr4_3:35742355-35742374 None:intergenic 30.0%
!! ATTTTAACATGCAAGTAACC+TGG + chr4_3:35742402-35742421 None:intergenic 30.0%
GATATACATAATTCAGCACA+TGG + chr4_3:35742431-35742450 None:intergenic 30.0%
GTTAACTTACTAATGATCCA+AGG + chr4_3:35742599-35742618 None:intergenic 30.0%
GTACTTTGTTAGATTAAGGA+TGG - chr4_3:35742627-35742646 Msa0639530:intron 30.0%
!!! ATCTTTCAAGATGGTTTTGT+AGG + chr4_3:35742787-35742806 None:intergenic 30.0%
AACATGTGCTTATATAAGTG+GGG + chr4_3:35742819-35742838 None:intergenic 30.0%
CTAACTCAAAACTACAAAAC+CGG - chr4_3:35742993-35743012 Msa0639530:intron 30.0%
TCCCAAACTTACAGAAATTA+CGG - chr4_3:35743385-35743404 Msa0639530:intron 30.0%
ATGTAAGGAAATGTTTAAGC+TGG + chr4_3:35743527-35743546 None:intergenic 30.0%
AATTATTCATTCTTCCCTGA+GGG + chr4_3:35743805-35743824 None:intergenic 30.0%
AAATTATTCATTCTTCCCTG+AGG + chr4_3:35743806-35743825 None:intergenic 30.0%
CTCTCATCTTCAAAATCACA+AGG - chr4_3:35734910-35734929 Msa0639530:three_prime_UTR 35.0%
AACCTTTGTGAGAGAGAAAT+GGG + chr4_3:35735065-35735084 None:intergenic 35.0%
AAAAATCGAAATCGACGAGT+CGG + chr4_3:35735167-35735186 None:intergenic 35.0%
! ATTTTTCTCAATGGCTGCTT+CGG - chr4_3:35735181-35735200 Msa0639530:three_prime_UTR 35.0%
AACTGTAGATGAAGCTACTA+AGG - chr4_3:35735244-35735263 Msa0639530:intron 35.0%
ACTGTAGATGAAGCTACTAA+GGG - chr4_3:35735245-35735264 Msa0639530:intron 35.0%
AGATAAATGACCTGTTGGAT+TGG - chr4_3:35735431-35735450 Msa0639530:intron 35.0%
TGTTATCCATAAGCTAGTCA+AGG - chr4_3:35735492-35735511 Msa0639530:intron 35.0%
!! AAACTACCTTGACTAGCTTA+TGG + chr4_3:35735501-35735520 None:intergenic 35.0%
GAAAATCTGTAACAAACAGG+TGG + chr4_3:35735801-35735820 None:intergenic 35.0%
! AGAGTATTTGGTCGAGTTTA+TGG + chr4_3:35736068-35736087 None:intergenic 35.0%
ATTCACGAATACGTAACATC+AGG + chr4_3:35736330-35736349 None:intergenic 35.0%
! GAAAGCTAACGACAATTTTG+TGG - chr4_3:35736401-35736420 Msa0639530:intron 35.0%
GAAGTTCAGCTTGTACTTTA+TGG - chr4_3:35736463-35736482 Msa0639530:intron 35.0%
AGTTCAGCTTGTACTTTATG+GGG - chr4_3:35736465-35736484 Msa0639530:intron 35.0%
AAAGGTCTTAAAAAATGCCC+CGG + chr4_3:35736630-35736649 None:intergenic 35.0%
ACGATTGAATTGACACAGTA+AGG - chr4_3:35736972-35736991 Msa0639530:intron 35.0%
AAAGTGATCCAGAGTTCAAA+GGG - chr4_3:35737078-35737097 Msa0639530:intron 35.0%
! AGGAGAGTATATTAGATGGA+TGG - chr4_3:35737273-35737292 Msa0639530:intron 35.0%
AGAGTATATTAGATGGATGG+AGG - chr4_3:35737276-35737295 Msa0639530:intron 35.0%
GAGTATATTAGATGGATGGA+GGG - chr4_3:35737277-35737296 Msa0639530:intron 35.0%
GTATCATGATTCAGATCTCA+CGG - chr4_3:35737494-35737513 Msa0639530:intron 35.0%
CGAATCGTGCAATTCATATA+TGG + chr4_3:35737619-35737638 None:intergenic 35.0%
TCAGTCATTTCCTCATATAC+GGG - chr4_3:35737817-35737836 Msa0639530:intron 35.0%
TTGTATGAAACCCGTATATG+AGG + chr4_3:35737830-35737849 None:intergenic 35.0%
TTTAGGCTTATGGTTAAGTG+TGG - chr4_3:35737925-35737944 Msa0639530:intron 35.0%
AAATGAATGTAGTGCTTGCT+TGG + chr4_3:35737978-35737997 None:intergenic 35.0%
GCCCTTAATATTATGTTTGC+TGG + chr4_3:35738129-35738148 None:intergenic 35.0%
AGGATAACTATTGTGAGAAG+AGG + chr4_3:35738196-35738215 None:intergenic 35.0%
! TTGGTGCTTATTTGATGACT+TGG - chr4_3:35738413-35738432 Msa0639530:intron 35.0%
! TTTTCATACACGTGACACAA+TGG - chr4_3:35738490-35738509 Msa0639530:intron 35.0%
CTACAGATCCTACTTATGAA+CGG + chr4_3:35738766-35738785 None:intergenic 35.0%
! CCACACTCAAAAGTGTAAAT+GGG - chr4_3:35739018-35739037 Msa0639530:intron 35.0%
ATGGGAAACATTTCCTTAGT+TGG - chr4_3:35739036-35739055 Msa0639530:intron 35.0%
AATAAACCTGCATCATCCAA+TGG - chr4_3:35739323-35739342 Msa0639530:intron 35.0%
ACTCGGACTTAATTGACTAA+CGG - chr4_3:35739465-35739484 Msa0639530:intron 35.0%
TAAAGGCTTGATTGAACCTT+TGG + chr4_3:35739567-35739586 None:intergenic 35.0%
CAATAACTTAAACAGCAAGC+AGG + chr4_3:35739613-35739632 None:intergenic 35.0%
! AAAAAAGTACATCCACGTGA+AGG + chr4_3:35739839-35739858 None:intergenic 35.0%
ATTACCTTATTGGGATAGCT+AGG - chr4_3:35739899-35739918 Msa0639530:intron 35.0%
CTAGGAGACTGAATTCTAAT+AGG - chr4_3:35739917-35739936 Msa0639530:intron 35.0%
CAATGTGTCCTGTAAACATA+AGG + chr4_3:35739950-35739969 None:intergenic 35.0%
CTTATGTTTACAGGACACAT+TGG - chr4_3:35739948-35739967 Msa0639530:intron 35.0%
!! TGAGTTTGTTAAGAAACCAG+AGG - chr4_3:35740025-35740044 Msa0639530:intron 35.0%
TTTGTTAAGAAACCAGAGGA+TGG - chr4_3:35740029-35740048 Msa0639530:intron 35.0%
! AAATGGATTTCATCATGTGG+AGG + chr4_3:35740231-35740250 None:intergenic 35.0%
! AAACATGGTTTAGAGTTAGG+AGG - chr4_3:35740337-35740356 Msa0639530:intron 35.0%
!!! GAGTTAGGAGGTATGTTTTT+TGG - chr4_3:35740349-35740368 Msa0639530:intron 35.0%
! TATCGTTGCTTTCGTCATAT+CGG + chr4_3:35740446-35740465 None:intergenic 35.0%
TAACAATTCAAATTGGACCG+AGG - chr4_3:35740607-35740626 Msa0639530:intron 35.0%
TGTAAGCTTGGTTTCATTCA+AGG + chr4_3:35741314-35741333 None:intergenic 35.0%
ATCTAGATCTCAAATCCCAT+AGG - chr4_3:35741356-35741375 Msa0639530:intron 35.0%
ATGAATGATAGAATGAGAGG+AGG - chr4_3:35741465-35741484 Msa0639530:intron 35.0%
GAGAGGAGGAAACTATATAT+AGG - chr4_3:35741479-35741498 Msa0639530:intron 35.0%
!! TATGAACACCGATTCAAATC+AGG - chr4_3:35741602-35741621 Msa0639530:intron 35.0%
!! ATGAACACCGATTCAAATCA+GGG - chr4_3:35741603-35741622 Msa0639530:intron 35.0%
! TGGAAATCCCTGATTTGAAT+CGG + chr4_3:35741613-35741632 None:intergenic 35.0%
TTTCGGTTCTACTCTGTTTA+TGG - chr4_3:35741828-35741847 Msa0639530:CDS 35.0%
ACAGAGAAGAACAGAACAAT+TGG + chr4_3:35741878-35741897 None:intergenic 35.0%
TTCTGCTTGATCTGTACTTT+AGG - chr4_3:35741903-35741922 Msa0639530:intron 35.0%
AGAGCAAGAACAACACAAAT+AGG + chr4_3:35741930-35741949 None:intergenic 35.0%
TGTTCTTGCTCTGTTCTATT+AGG - chr4_3:35741938-35741957 Msa0639530:intron 35.0%
GTTCTTGCTCTGTTCTATTA+GGG - chr4_3:35741939-35741958 Msa0639530:intron 35.0%
! AAGACTTAAGTTTGAAGCAC+AGG + chr4_3:35742138-35742157 None:intergenic 35.0%
GCATTTATTAAGGATCCTGA+TGG - chr4_3:35742195-35742214 Msa0639530:intron 35.0%
ATTTCAATCCAGTATCCATC+AGG + chr4_3:35742213-35742232 None:intergenic 35.0%
TAAGATAAACAAACCCCTTC+AGG - chr4_3:35742276-35742295 Msa0639530:intron 35.0%
GTAAGGAAAACATTACACTC+AGG + chr4_3:35742356-35742375 None:intergenic 35.0%
ATTCTCTAACATAAGGAACC+AGG - chr4_3:35742381-35742400 Msa0639530:intron 35.0%
ATCTAAACCAAAGATGCAAG+TGG - chr4_3:35742524-35742543 Msa0639530:intron 35.0%
ACAGTAAGCTGATTAGAACT+AGG - chr4_3:35742745-35742764 Msa0639530:intron 35.0%
CAGTAAGCTGATTAGAACTA+GGG - chr4_3:35742746-35742765 Msa0639530:intron 35.0%
!!! ATGGTTTTGTAGGATAAGGT+GGG + chr4_3:35742777-35742796 None:intergenic 35.0%
!!! CAAGATGGTTTTGTAGGATA+AGG + chr4_3:35742781-35742800 None:intergenic 35.0%
CAAAACCATCTTGAAAGATG+AGG - chr4_3:35742788-35742807 Msa0639530:intron 35.0%
ACATGTGCTTATATAAGTGG+GGG + chr4_3:35742818-35742837 None:intergenic 35.0%
TCCTATTAGGTTACCGTTAT+CGG + chr4_3:35742917-35742936 None:intergenic 35.0%
ATCAAAGCCTATTCATGATC+CGG + chr4_3:35742949-35742968 None:intergenic 35.0%
!!! CGGTTTTGTAGTTTTGAGTT+AGG + chr4_3:35742995-35743014 None:intergenic 35.0%
CCTCAATAGGTGTTTATAAG+TGG + chr4_3:35743037-35743056 None:intergenic 35.0%
CCACTTATAAACACCTATTG+AGG - chr4_3:35743034-35743053 Msa0639530:intron 35.0%
GAATGAGATAAGACCTCAAT+AGG + chr4_3:35743050-35743069 None:intergenic 35.0%
GTTTGTCAAGAGTCTCAAAT+TGG + chr4_3:35743076-35743095 None:intergenic 35.0%
ATCATTCTCTTGCACATACA+AGG + chr4_3:35743103-35743122 None:intergenic 35.0%
ACTTATAAGAAACTCGCCAA+TGG + chr4_3:35743169-35743188 None:intergenic 35.0%
CCCGTAATTTCTGTAAGTTT+GGG + chr4_3:35743389-35743408 None:intergenic 35.0%
CCCAAACTTACAGAAATTAC+GGG - chr4_3:35743386-35743405 Msa0639530:intron 35.0%
ACCCGTAATTTCTGTAAGTT+TGG + chr4_3:35743390-35743409 None:intergenic 35.0%
TAACTTCAATGCAAGTCACT+TGG - chr4_3:35743486-35743505 Msa0639530:intron 35.0%
! TATGATGATGCGCATATGTA+AGG + chr4_3:35743542-35743561 None:intergenic 35.0%
!! TTTCACATGCCATTGATTTG+AGG + chr4_3:35743592-35743611 None:intergenic 35.0%
CATCTCGTTGCAGATATAAT+CGG - chr4_3:35743723-35743742 Msa0639530:CDS 35.0%
ATCTCGTTGCAGATATAATC+GGG - chr4_3:35743724-35743743 Msa0639530:CDS 35.0%
ACTACTTGCTTTGTAAGTCT+CGG - chr4_3:35743766-35743785 Msa0639530:CDS 35.0%
GTAGTCAAAGCAGAATGTTA+AGG - chr4_3:35743826-35743845 Msa0639530:intron 35.0%
AAATGGGAAGGGATTGAAAG+AGG + chr4_3:35735049-35735068 None:intergenic 40.0%
TTGTGAGAGAGAAATGGGAA+GGG + chr4_3:35735060-35735079 None:intergenic 40.0%
TTTGTGAGAGAGAAATGGGA+AGG + chr4_3:35735061-35735080 None:intergenic 40.0%
TTCCCATTTCTCTCTCACAA+AGG - chr4_3:35735060-35735079 Msa0639530:three_prime_UTR 40.0%
GAACCTTTGTGAGAGAGAAA+TGG + chr4_3:35735066-35735085 None:intergenic 40.0%
TTCGGAATCAAAGGAATCAC+CGG - chr4_3:35735199-35735218 Msa0639530:three_prime_UTR 40.0%
TAGCTTCATCTACAGTTGCA+TGG + chr4_3:35735241-35735260 None:intergenic 40.0%
! CAGGTGGAAACTTCTAAAAG+TGG + chr4_3:35735785-35735804 None:intergenic 40.0%
CGACCAAATACTCTAACAAG+TGG - chr4_3:35736074-35736093 Msa0639530:intron 40.0%
TACAAGCTGAACTTCATCTC+AGG + chr4_3:35736458-35736477 None:intergenic 40.0%
CTTGTACTTTATGGGGTATG+AGG - chr4_3:35736472-35736491 Msa0639530:intron 40.0%
ACTTTATGGGGTATGAGGTA+TGG - chr4_3:35736477-35736496 Msa0639530:intron 40.0%
TATTGCCAATCCAACGCATA+TGG + chr4_3:35736578-35736597 None:intergenic 40.0%
AAGGTCTTAAAAAATGCCCC+GGG + chr4_3:35736629-35736648 None:intergenic 40.0%
GGAATTCTTAAATTGTGCCC+CGG - chr4_3:35736733-35736752 Msa0639530:CDS 40.0%
GAATTCTTAAATTGTGCCCC+GGG - chr4_3:35736734-35736753 Msa0639530:CDS 40.0%
AATTCTTAAATTGTGCCCCG+GGG - chr4_3:35736735-35736754 Msa0639530:CDS 40.0%
! ATCTGAAGCTCCAAGTAACT+CGG - chr4_3:35736914-35736933 Msa0639530:intron 40.0%
GTTCTATCAACCGAGTTACT+TGG + chr4_3:35736927-35736946 None:intergenic 40.0%
!! ACTCGGTTGATAGAACAGTT+TGG - chr4_3:35736931-35736950 Msa0639530:intron 40.0%
AGTTTGGACCTTTGCTCAAA+AGG - chr4_3:35736947-35736966 Msa0639530:intron 40.0%
! AATCGTAGCCTTTTGAGCAA+AGG + chr4_3:35736958-35736977 None:intergenic 40.0%
GAAAGTGATCCAGAGTTCAA+AGG - chr4_3:35737077-35737096 Msa0639530:intron 40.0%
TTGTGATACCCTTTGAACTC+TGG + chr4_3:35737089-35737108 None:intergenic 40.0%
!! GAGTTCAAAGGGTATCACAA+TGG - chr4_3:35737089-35737108 Msa0639530:intron 40.0%
! AATTCTGATCCTCGTGGTTT+TGG - chr4_3:35737113-35737132 Msa0639530:intron 40.0%
TATCACTTACCAAAACCACG+AGG + chr4_3:35737125-35737144 None:intergenic 40.0%
ATATAGCTGACCCCACTTAA+TGG - chr4_3:35737417-35737436 Msa0639530:intron 40.0%
! ATATGAATTGCACGATTCGG+TGG - chr4_3:35737620-35737639 Msa0639530:intron 40.0%
ACTACAGGGAAAAAAGCTGT+TGG - chr4_3:35737715-35737734 Msa0639530:intron 40.0%
CTACAGGGAAAAAAGCTGTT+GGG - chr4_3:35737716-35737735 Msa0639530:intron 40.0%
TACAGGGAAAAAAGCTGTTG+GGG - chr4_3:35737717-35737736 Msa0639530:intron 40.0%
! TTTGATGACTTGGAAGCTCA+TGG - chr4_3:35738423-35738442 Msa0639530:intron 40.0%
ATCGAGATCCTATGTAGGAT+CGG - chr4_3:35738702-35738721 Msa0639530:intron 40.0%
ACGTAACACCGTTCATAAGT+AGG - chr4_3:35738755-35738774 Msa0639530:intron 40.0%
CGTTCATAAGTAGGATCTGT+AGG - chr4_3:35738764-35738783 Msa0639530:intron 40.0%
GGAAAAACAGCGAAAAACAG+AGG - chr4_3:35738867-35738886 Msa0639530:intron 40.0%
GGAAAAACAGCGAAAAACAG+AGG - chr4_3:35738867-35738886 Msa0639530:intron 40.0%
GCGAAAAACAGAGGAAATAG+AGG - chr4_3:35738897-35738916 Msa0639530:intron 40.0%
ATCAGAGTGAAGTTGAAGCA+CGG - chr4_3:35738938-35738957 Msa0639530:CDS 40.0%
TCTTACGATTCTACGTCCAA+CGG + chr4_3:35738972-35738991 None:intergenic 40.0%
! GCCACACTCAAAAGTGTAAA+TGG - chr4_3:35739017-35739036 Msa0639530:intron 40.0%
!! CCCATTTACACTTTTGAGTG+TGG + chr4_3:35739021-35739040 None:intergenic 40.0%
! ACTAACGGAGGTGTATTTGA+GGG - chr4_3:35739480-35739499 Msa0639530:intron 40.0%
ACTAGGTCACCAGAGTAAAA+TGG + chr4_3:35739737-35739756 None:intergenic 40.0%
TTAGTTTCATGTCCTTCACG+TGG - chr4_3:35739824-35739843 Msa0639530:intron 40.0%
GAAGTCGTCCTTATGTTTAC+AGG - chr4_3:35739939-35739958 Msa0639530:intron 40.0%
ATATGGATGCTTTGTGTGTG+AGG - chr4_3:35740124-35740143 Msa0639530:intron 40.0%
AACATAACAGATGGCCATGT+AGG + chr4_3:35740188-35740207 None:intergenic 40.0%
AGTAGTGTGAAACTTGAGGA+TGG - chr4_3:35740301-35740320 Msa0639530:intron 40.0%
ACAACTTATGCGAGCACTTA+TGG - chr4_3:35740375-35740394 Msa0639530:intron 40.0%
GCTTATGTATCAGCTACTGT+TGG - chr4_3:35740420-35740439 Msa0639530:intron 40.0%
GAAAGCAACGATAAGCTAGA+GGG - chr4_3:35740453-35740472 Msa0639530:intron 40.0%
AAAGCAACGATAAGCTAGAG+GGG - chr4_3:35740454-35740473 Msa0639530:intron 40.0%
AGAAGAAAACGCCTCTTCTA+CGG - chr4_3:35740986-35741005 Msa0639530:intron 40.0%
CTAGTATTAGTCCGTAGAAG+AGG + chr4_3:35741000-35741019 None:intergenic 40.0%
! GTGTAGAAGGTTTAGGATCA+TGG + chr4_3:35741076-35741095 None:intergenic 40.0%
GAGTGGTTACATAGTGTAGA+AGG + chr4_3:35741089-35741108 None:intergenic 40.0%
TCAAAGAGCTTGAAGATTGG+AGG + chr4_3:35741117-35741136 None:intergenic 40.0%
TTGAAATTGGATGAATCCCG+AGG - chr4_3:35741133-35741152 Msa0639530:intron 40.0%
CCAAACAATTGAGGTTGAAG+GGG + chr4_3:35741235-35741254 None:intergenic 40.0%
CCCAAACAATTGAGGTTGAA+GGG + chr4_3:35741236-35741255 None:intergenic 40.0%
CCCTTCAACCTCAATTGTTT+GGG - chr4_3:35741233-35741252 Msa0639530:intron 40.0%
TCCCAAACAATTGAGGTTGA+AGG + chr4_3:35741237-35741256 None:intergenic 40.0%
! GGTTGTTTCCCAAACAATTG+AGG + chr4_3:35741244-35741263 None:intergenic 40.0%
TCACCTCCAAAGGTAATTGT+GGG + chr4_3:35741267-35741286 None:intergenic 40.0%
TTCACCTCCAAAGGTAATTG+TGG + chr4_3:35741268-35741287 None:intergenic 40.0%
! CTAGATTGTTAGGGTGCTAT+AGG + chr4_3:35741342-35741361 None:intergenic 40.0%
ATTCGAATCCATCTCCTTAC+AGG - chr4_3:35741665-35741684 Msa0639530:intron 40.0%
! CTGTTCGTTTATAAAGCACC+CGG + chr4_3:35741766-35741785 None:intergenic 40.0%
GGGTGCTTTATAAACGAACA+GGG - chr4_3:35741765-35741784 Msa0639530:intron 40.0%
TAAATTCTGCTGATGCCATC+AGG - chr4_3:35742104-35742123 Msa0639530:intron 40.0%
! ACTTAAGTTTGAAGCACAGG+TGG + chr4_3:35742135-35742154 None:intergenic 40.0%
! TTAAGGATCCTGATGGATAC+TGG - chr4_3:35742202-35742221 Msa0639530:intron 40.0%
AACTACAGTCTCTACCTGAA+GGG + chr4_3:35742293-35742312 None:intergenic 40.0%
AAACTACAGTCTCTACCTGA+AGG + chr4_3:35742294-35742313 None:intergenic 40.0%
! GGAGAAAGAGCGATTTTACA+TGG + chr4_3:35742453-35742472 None:intergenic 40.0%
!!! GATGGTTTTGTAGGATAAGG+TGG + chr4_3:35742778-35742797 None:intergenic 40.0%
TGTGTTAAGAGGTCTCACAT+TGG + chr4_3:35742857-35742876 None:intergenic 40.0%
CCTATTAGGTTACCGTTATC+GGG + chr4_3:35742916-35742935 None:intergenic 40.0%
! GATAACGGTAACCTAATAGG+AGG - chr4_3:35742916-35742935 Msa0639530:intron 40.0%
!! AACTACAAAACCGGCTTGTA+AGG - chr4_3:35743002-35743021 Msa0639530:intron 40.0%
TCTCTTGCACATACAAGGTA+AGG + chr4_3:35743098-35743117 None:intergenic 40.0%
CGAACTTGTGATGTATTCAC+AGG - chr4_3:35743133-35743152 Msa0639530:intron 40.0%
AACTCGCCAATGGTTAATTC+TGG + chr4_3:35743159-35743178 None:intergenic 40.0%
GACATTCCAGCTAGAAAGAA+TGG + chr4_3:35743277-35743296 None:intergenic 40.0%
ACTTACAGAAATTACGGGTG+AGG - chr4_3:35743391-35743410 Msa0639530:intron 40.0%
CGATGAATCGAAGACGAGAA+AGG + chr4_3:35734997-35735016 None:intergenic 45.0%
! GAGAGGAAGATGTTGGTGTT+TGG + chr4_3:35735020-35735039 None:intergenic 45.0%
AAGGGATTGAAAGAGGAGAG+GGG + chr4_3:35735042-35735061 None:intergenic 45.0%
GAAGGGATTGAAAGAGGAGA+GGG + chr4_3:35735043-35735062 None:intergenic 45.0%
AATGGCTGCTTCGGAATCAA+AGG - chr4_3:35735190-35735209 Msa0639530:three_prime_UTR 45.0%
!!! GACTGTATTTTGGCTCCGTT+TGG + chr4_3:35735648-35735667 None:intergenic 45.0%
GAGCTATCTACGAATGCTTG+TGG - chr4_3:35735702-35735721 Msa0639530:intron 45.0%
TATGCATGAGCCATATGCGT+TGG - chr4_3:35736565-35736584 Msa0639530:intron 45.0%
ATGAGCCATATGCGTTGGAT+TGG - chr4_3:35736570-35736589 Msa0639530:intron 45.0%
AGGTCTTAAAAAATGCCCCG+GGG + chr4_3:35736628-35736647 None:intergenic 45.0%
ATTCTTAAATTGTGCCCCGG+GGG - chr4_3:35736736-35736755 Msa0639530:CDS 45.0%
AATGGCAATTCTGATCCTCG+TGG - chr4_3:35737107-35737126 Msa0639530:intron 45.0%
TCAGGATCGAGATCCTATGT+AGG - chr4_3:35738697-35738716 Msa0639530:intron 45.0%
AGATCCTATGTAGGATCGGT+CGG - chr4_3:35738706-35738725 Msa0639530:intron 45.0%
GGTGAAGGAACGTAAAAACG+AGG - chr4_3:35738731-35738750 Msa0639530:intron 45.0%
!! TTACACTTTTGAGTGTGGCC+AGG + chr4_3:35739016-35739035 None:intergenic 45.0%
CGGACTTAATTGACTAACGG+AGG - chr4_3:35739468-35739487 Msa0639530:intron 45.0%
! GACTAACGGAGGTGTATTTG+AGG - chr4_3:35739479-35739498 Msa0639530:intron 45.0%
CCTTTGGTCCCCTAACTTAT+TGG + chr4_3:35739551-35739570 None:intergenic 45.0%
CCAATAAGTTAGGGGACCAA+AGG - chr4_3:35739548-35739567 Msa0639530:intron 45.0%
GTCTCCTAGCTATCCCAATA+AGG + chr4_3:35739906-35739925 None:intergenic 45.0%
GGATTTCATCATGTGGAGGA+GGG + chr4_3:35740227-35740246 None:intergenic 45.0%
TGGATTTCATCATGTGGAGG+AGG + chr4_3:35740228-35740247 None:intergenic 45.0%
CGAAAGCAACGATAAGCTAG+AGG - chr4_3:35740452-35740471 Msa0639530:intron 45.0%
AAGCAACGATAAGCTAGAGG+GGG - chr4_3:35740455-35740474 Msa0639530:intron 45.0%
CAGCTGAAGAGTGAATTCCT+CGG + chr4_3:35740627-35740646 None:intergenic 45.0%
! AGCTTGAAGATTGGAGGCAT+TGG + chr4_3:35741111-35741130 None:intergenic 45.0%
CCCCTTCAACCTCAATTGTT+TGG - chr4_3:35741232-35741251 Msa0639530:intron 45.0%
ACAACCCCCACAATTACCTT+TGG - chr4_3:35741258-35741277 Msa0639530:intron 45.0%
ACCTCCAAAGGTAATTGTGG+GGG + chr4_3:35741265-35741284 None:intergenic 45.0%
CACCTCCAAAGGTAATTGTG+GGG + chr4_3:35741266-35741285 None:intergenic 45.0%
!!! GAGCTACTTTTCACCTCCAA+AGG + chr4_3:35741277-35741296 None:intergenic 45.0%
TTCGAATCATTCATCCCCTC+AGG + chr4_3:35741695-35741714 None:intergenic 45.0%
CGGGTGCTTTATAAACGAAC+AGG - chr4_3:35741764-35741783 Msa0639530:intron 45.0%
ACTACAGTCTCTACCTGAAG+GGG + chr4_3:35742292-35742311 None:intergenic 45.0%
GAACAAGTTGTGTAAGCCCT+TGG - chr4_3:35742579-35742598 Msa0639530:intron 45.0%
GCAGTCCTCATCTTTCAAGA+TGG + chr4_3:35742796-35742815 None:intergenic 45.0%
GTCTCACATTGGATGAGAAC+GGG + chr4_3:35742846-35742865 None:intergenic 45.0%
GGTCTCACATTGGATGAGAA+CGG + chr4_3:35742847-35742866 None:intergenic 45.0%
GTTCAAATCTGGTCGTGAGA+GGG + chr4_3:35742880-35742899 None:intergenic 45.0%
TGTTCAAATCTGGTCGTGAG+AGG + chr4_3:35742881-35742900 None:intergenic 45.0%
CACGACCAGATTTGAACATC+TGG - chr4_3:35742883-35742902 Msa0639530:intron 45.0%
ACGCTCCAGATGTTCAAATC+TGG + chr4_3:35742891-35742910 None:intergenic 45.0%
! CCCGATAACGGTAACCTAAT+AGG - chr4_3:35742913-35742932 Msa0639530:intron 45.0%
AACGGTAACCTAATAGGAGG+TGG - chr4_3:35742919-35742938 Msa0639530:intron 45.0%
AAGCCTATTCATGATCCGGT+GGG + chr4_3:35742945-35742964 None:intergenic 45.0%
AAAGCCTATTCATGATCCGG+TGG + chr4_3:35742946-35742965 None:intergenic 45.0%
CACAGGCCAGAATTAACCAT+TGG - chr4_3:35743150-35743169 Msa0639530:intron 45.0%
! AGAATGGACTCACTCCTACT+TGG + chr4_3:35743261-35743280 None:intergenic 45.0%
! GTGAGTCCATTCTTTCTAGC+TGG - chr4_3:35743268-35743287 Msa0639530:intron 45.0%
!! TTATGAAAAAAAAAAAAAAT+AGG - chr4_3:35735519-35735538 Msa0639530:intron 5.0%
!!! AAAAAAATATTTTTGATAAT+TGG - chr4_3:35735891-35735910 Msa0639530:intron 5.0%
!!! ATTTTTATTTATAAATGATA+TGG - chr4_3:35740107-35740126 Msa0639530:intron 5.0%
ATTGAAAGAGGAGAGGGGAG+AGG + chr4_3:35735037-35735056 None:intergenic 50.0%
GGAAGGGATTGAAAGAGGAG+AGG + chr4_3:35735044-35735063 None:intergenic 50.0%
CTACAGTTGCATGGAGACCA+GGG + chr4_3:35735232-35735251 None:intergenic 50.0%
TCTACAGTTGCATGGAGACC+AGG + chr4_3:35735233-35735252 None:intergenic 50.0%
TGGGGTATGAGGTATGGCTA+TGG - chr4_3:35736483-35736502 Msa0639530:intron 50.0%
GAAATGTTAACGAGTGCCCC+CGG - chr4_3:35736608-35736627 Msa0639530:intron 50.0%
AAATGTTAACGAGTGCCCCC+GGG - chr4_3:35736609-35736628 Msa0639530:intron 50.0%
GGTCTTAAAAAATGCCCCGG+GGG + chr4_3:35736627-35736646 None:intergenic 50.0%
AGCATGTAGAGACTCGGCTT+AGG - chr4_3:35737208-35737227 Msa0639530:intron 50.0%
ATGTAGAGACTCGGCTTAGG+TGG - chr4_3:35737211-35737230 Msa0639530:intron 50.0%
AGACTCGGCTTAGGTGGTTT+GGG - chr4_3:35737217-35737236 Msa0639530:intron 50.0%
GATCCTATGTAGGATCGGTC+GGG - chr4_3:35738707-35738726 Msa0639530:intron 50.0%
GTGAAGTTGAAGCACGGTTG+AGG - chr4_3:35738944-35738963 Msa0639530:CDS 50.0%
TTCCCATATCGTCCTCGCTA+AGG - chr4_3:35740946-35740965 Msa0639530:intron 50.0%
TCCCATATCGTCCTCGCTAA+GGG - chr4_3:35740947-35740966 Msa0639530:intron 50.0%
ACCCTTAGCGAGGACGATAT+GGG + chr4_3:35740951-35740970 None:intergenic 50.0%
TACCCTTAGCGAGGACGATA+TGG + chr4_3:35740952-35740971 None:intergenic 50.0%
GAGAAGATGTACCCTTAGCG+AGG + chr4_3:35740961-35740980 None:intergenic 50.0%
!! GAAGATTGGAGGCATTGGAG+TGG + chr4_3:35741106-35741125 None:intergenic 50.0%
! TGGATGAATCCCGAGGTGTT+CGG - chr4_3:35741140-35741159 Msa0639530:intron 50.0%
TAGCTTGATCCGAACACCTC+GGG + chr4_3:35741152-35741171 None:intergenic 50.0%
CTAGCTTGATCCGAACACCT+CGG + chr4_3:35741153-35741172 None:intergenic 50.0%
ACCCCCACAATTACCTTTGG+AGG - chr4_3:35741261-35741280 Msa0639530:intron 50.0%
CAGGTTGTCCTGTAAGGAGA+TGG + chr4_3:35741676-35741695 None:intergenic 50.0%
TCTCCTTACAGGACAACCTG+AGG - chr4_3:35741676-35741695 Msa0639530:intron 50.0%
CTCCTTACAGGACAACCTGA+GGG - chr4_3:35741677-35741696 Msa0639530:intron 50.0%
TCCTTACAGGACAACCTGAG+GGG - chr4_3:35741678-35741697 Msa0639530:intron 50.0%
! AGTTTGAAGCACAGGTGGTG+CGG + chr4_3:35742130-35742149 None:intergenic 50.0%
GCTTGCTCCACTTGCATCTT+TGG + chr4_3:35742534-35742553 None:intergenic 50.0%
! TCGTGAGAGGGTGTGTTAAG+AGG + chr4_3:35742868-35742887 None:intergenic 50.0%
!! AAAACCGGCTTGTAAGGCGA+GGG - chr4_3:35743008-35743027 Msa0639530:intron 50.0%
GTACTTCTCCAACTCCCTCA+GGG - chr4_3:35743788-35743807 Msa0639530:intron 50.0%
TCATTCTTCCCTGAGGGAGT+TGG + chr4_3:35743799-35743818 None:intergenic 50.0%
GAGAGGGGAGAGGAAGATGT+TGG + chr4_3:35735027-35735046 None:intergenic 55.0%
! GAATCACCGGCTAACAACCC+TGG - chr4_3:35735212-35735231 Msa0639530:three_prime_UTR 55.0%
TGGAGACCAGGGTTGTTAGC+CGG + chr4_3:35735221-35735240 None:intergenic 55.0%
AATGTTAACGAGTGCCCCCG+GGG - chr4_3:35736610-35736629 Msa0639530:intron 55.0%
TCTTGTTAACGAGTGCCCCC+GGG + chr4_3:35736754-35736773 None:intergenic 55.0%
! GTCTTGTTAACGAGTGCCCC+CGG + chr4_3:35736755-35736774 None:intergenic 55.0%
GAGACTCGGCTTAGGTGGTT+TGG - chr4_3:35737216-35737235 Msa0639530:intron 55.0%
AGGGAGCCATTGGATGATGC+AGG + chr4_3:35739332-35739351 None:intergenic 55.0%
GGTTGAAGGGGATCGAAGTG+AGG + chr4_3:35741223-35741242 None:intergenic 55.0%
! TCCCCTCAGGTTGTCCTGTA+AGG + chr4_3:35741682-35741701 None:intergenic 55.0%
! TCTGGAGCGTGACCCGATAA+CGG - chr4_3:35742901-35742920 Msa0639530:intron 55.0%
TGGCCCACCGGATCATGAAT+AGG - chr4_3:35742939-35742958 Msa0639530:intron 55.0%
!! CAAAACCGGCTTGTAAGGCG+AGG - chr4_3:35743007-35743026 Msa0639530:intron 55.0%
GGTACTTCTCCAACTCCCTC+AGG - chr4_3:35743787-35743806 Msa0639530:intron 55.0%
CTTGTTAACGAGTGCCCCCG+GGG + chr4_3:35736753-35736772 None:intergenic 60.0%
CCACCCGACCGATCCTACAT+AGG + chr4_3:35738713-35738732 None:intergenic 60.0%
CCTATGTAGGATCGGTCGGG+TGG - chr4_3:35738710-35738729 Msa0639530:intron 60.0%
TAGGATCGGTCGGGTGGTGA+AGG - chr4_3:35738716-35738735 Msa0639530:intron 60.0%
!! AAGCACGGTTGAGGTGCCGT+TGG - chr4_3:35738953-35738972 Msa0639530:CDS 60.0%
!! AGGATCGAGTGCTGGCTCGT+AGG + chr4_3:35738996-35739015 None:intergenic 60.0%
TACGAGCCAGCACTCGATCC+TGG - chr4_3:35738995-35739014 Msa0639530:intron 60.0%
CCTAATAGGAGGTGGCCCAC+CGG - chr4_3:35742927-35742946 Msa0639530:intron 60.0%
GAGACCCTCGCCTTACAAGC+CGG + chr4_3:35743015-35743034 None:intergenic 60.0%
GTGTGGCCAGGATCGAGTGC+TGG + chr4_3:35739004-35739023 None:intergenic 65.0%
CCGGTGGGCCACCTCCTATT+AGG + chr4_3:35742930-35742949 None:intergenic 65.0%
GCACAGGTGGTGCGGCCTGA+TGG + chr4_3:35742122-35742141 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 35734909 35744043 35734909 ID=Msa0639530;Name=Msa0639530
chr4_3 mRNA 35734909 35744043 35734909 ID=Msa0639530-mRNA-1;Parent=Msa0639530;Name=Msa0639530-mRNA-1;_AED=0.10;_eAED=0.10;_QI=56|0.87|0.88|1|0.87|0.77|9|347|241
chr4_3 exon 35734909 35735236 35734909 ID=Msa0639530-mRNA-1:exon:8332;Parent=Msa0639530-mRNA-1
chr4_3 exon 35736655 35736774 35736655 ID=Msa0639530-mRNA-1:exon:8331;Parent=Msa0639530-mRNA-1
chr4_3 exon 35738902 35738991 35738902 ID=Msa0639530-mRNA-1:exon:8330;Parent=Msa0639530-mRNA-1
chr4_3 exon 35741818 35741903 35741818 ID=Msa0639530-mRNA-1:exon:8329;Parent=Msa0639530-mRNA-1
chr4_3 exon 35741964 35742043 35741964 ID=Msa0639530-mRNA-1:exon:8328;Parent=Msa0639530-mRNA-1
chr4_3 exon 35742459 35742519 35742459 ID=Msa0639530-mRNA-1:exon:8327;Parent=Msa0639530-mRNA-1
chr4_3 exon 35742681 35742742 35742681 ID=Msa0639530-mRNA-1:exon:8326;Parent=Msa0639530-mRNA-1
chr4_3 exon 35743666 35743794 35743666 ID=Msa0639530-mRNA-1:exon:8325;Parent=Msa0639530-mRNA-1
chr4_3 exon 35743871 35744043 35743871 ID=Msa0639530-mRNA-1:exon:8324;Parent=Msa0639530-mRNA-1
chr4_3 five_prime_UTR 35743988 35744043 35743988 ID=Msa0639530-mRNA-1:five_prime_utr;Parent=Msa0639530-mRNA-1
chr4_3 CDS 35743871 35743987 35743871 ID=Msa0639530-mRNA-1:cds;Parent=Msa0639530-mRNA-1
chr4_3 CDS 35743666 35743794 35743666 ID=Msa0639530-mRNA-1:cds;Parent=Msa0639530-mRNA-1
chr4_3 CDS 35742681 35742742 35742681 ID=Msa0639530-mRNA-1:cds;Parent=Msa0639530-mRNA-1
chr4_3 CDS 35742459 35742519 35742459 ID=Msa0639530-mRNA-1:cds;Parent=Msa0639530-mRNA-1
chr4_3 CDS 35741964 35742043 35741964 ID=Msa0639530-mRNA-1:cds;Parent=Msa0639530-mRNA-1
chr4_3 CDS 35741818 35741903 35741818 ID=Msa0639530-mRNA-1:cds;Parent=Msa0639530-mRNA-1
chr4_3 CDS 35738902 35738991 35738902 ID=Msa0639530-mRNA-1:cds;Parent=Msa0639530-mRNA-1
chr4_3 CDS 35736674 35736774 35736674 ID=Msa0639530-mRNA-1:cds;Parent=Msa0639530-mRNA-1
chr4_3 three_prime_UTR 35736655 35736673 35736655 ID=Msa0639530-mRNA-1:three_prime_utr;Parent=Msa0639530-mRNA-1
chr4_3 three_prime_UTR 35734909 35735236 35734909 ID=Msa0639530-mRNA-1:three_prime_utr;Parent=Msa0639530-mRNA-1
Gene Sequence

>Msa0639530

ATGTCGACTGCTACTTCTACTATACACTTCCTTTCTCGTCTTCGATTCATCGCCAAACACCAACATCTTCCTCTCCCCTCTCCTCTTTCAATCCCTTCCCATTTCTCTCTCACAAAGAAACAACCGACTCGTCGATTTCGATTTTTCTCAATGGCTGCTTCGGAATCAAAGGAATCACCGGCTAACAACCCTGGTCTCCATGCAACTGTAGATGAAGCTACTAAGGGTTACTTCATGCAACAAACTATGTTCAGAATCAAAGACCCCAAAGTTAGCCTTGATTTTTATTCTCGCGTTTTGGGCATGTCTTTGCTTAAGAGATTGGATTTTCCTGAGATGAAGTTCAGCTTGTACTTTATGGGGTATGAGGATACATCTGAAGCTCCAAGTAACTCGGTTGATAGAACAGTTTGGACCTTTGCTCAAAAGGCTACGATTGAATTGACACATAAAGTAATATACAGTAACTGGGGTACTGAAAGTGATCCAGAGTTCAAAGGGTATCACAATGGCAATTCTGATCCTCGTGGTTTTGGACACATTGGCATTACTGTTGATGACACCTTCAAAGCATGTGAAAGATTTCAGAACTTGGGAGTTGAGTTTGTTAAGAAACCAGAGGATGGAAAAATGAAAGGGATAGCATTTATTAAGGATCCTGATGGATACTGGATTGAAATTTTTGACCGGAAAACAATTGGAAATGTAACAGGAAGTGCTGCTTAA

Protein sequence

>Msa0639530

MSTATSTIHFLSRLRFIAKHQHLPLPSPLSIPSHFSLTKKQPTRRFRFFSMAASESKESPANNPGLHATVDEATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTSEAPSNSVDRTVWTFAQKATIELTHKVIYSNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTFKACERFQNLGVEFVKKPEDGKMKGIAFIKDPDGYWIEIFDRKTIGNVTGSAA*