AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0304350


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0304350 MtrunA17_Chr2g0332621 94.585 277 15 0 1 277 1 277 0.0 536
Msa0304350 MtrunA17_Chr5g0437771 33.871 248 157 5 30 273 35 279 3.83e-37 132
Msa0304350 MtrunA17_Chr3g0114231 34.615 208 120 4 78 273 71 274 8.90e-31 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0304350 AT3G15690.2 49.097 277 126 5 1 276 1 263 1.33e-81 246
Msa0304350 AT1G52670.1 46.154 273 143 4 6 276 4 274 3.26e-73 226
Msa0304350 AT3G15690.1 45.669 254 123 5 1 253 1 240 5.97e-65 204
Msa0304350 AT3G15690.3 45.161 248 123 4 7 253 7 242 2.86e-63 199
Msa0304350 AT3G56130.1 34.956 226 126 4 63 272 58 278 5.52e-35 127
Msa0304350 AT3G56130.2 36.458 192 102 3 96 272 16 202 2.50e-33 121
Msa0304350 AT3G56130.3 55.319 94 42 0 179 272 98 191 2.48e-30 113
Msa0304350 AT3G56130.4 31.884 207 120 4 63 253 58 259 1.07e-24 100
Msa0304350 AT3G56130.5 29.319 191 114 4 63 237 58 243 7.02e-17 78.6

Find 88 sgRNAs with CRISPR-Local

Find 395 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCACTAACATCATTAAAAT+TGG 0.116441 2_3:-61652553 None:intergenic
CTCTTTGCAGGTGGAATTCT+TGG 0.142729 2_3:+61652726 Msa0304350:intron
TTTATCCTTATCTTCCCTTT+TGG 0.207575 2_3:-61653981 None:intergenic
GTTGAGCTTTCACAACATTT+TGG 0.245452 2_3:+61649589 Msa0304350:CDS
GCGGGTGTATTTATACTTAC+AGG 0.253090 2_3:-61653005 None:intergenic
ATATTGAAGCTTCTTTATTC+CGG 0.272327 2_3:-61653815 None:intergenic
GAAACTGATCCATTTGGTTT+AGG 0.301102 2_3:-61653035 None:intergenic
TCTGAAGAGATTAAATCTTC+TGG 0.320860 2_3:+61652510 Msa0304350:CDS
AAGTTCTAATCACATGTTAA+TGG 0.322658 2_3:-61648337 None:intergenic
TATTGAAGCTTCTTTATTCC+GGG 0.339110 2_3:-61653814 None:intergenic
TTGAGAACAAGTTATATATA+TGG 0.339886 2_3:+61653898 Msa0304350:three_prime_UTR
CAGAAGATCTCGGACGATAA+AGG 0.350185 2_3:+61653242 Msa0304350:CDS
TCTGCTGATTGGTCATTAGA+TGG 0.359586 2_3:-61649691 None:intergenic
GCAATATTGCCGTCATTTCC+CGG 0.364958 2_3:+61653796 Msa0304350:CDS
GATGATAAACAGCTGTTTCA+AGG 0.373445 2_3:+61652475 Msa0304350:intron
AATGATATATATCAGCTTGA+TGG 0.374079 2_3:+61652915 Msa0304350:intron
GTTGGGGACTTGGATTGCTT+TGG 0.378715 2_3:-61648374 None:intergenic
GTGACAGATCCAGTTGGTTA+TGG 0.384983 2_3:+61653760 Msa0304350:intron
CAACTGGTAAGTTGGGGACT+TGG 0.388451 2_3:-61648384 None:intergenic
TCTTTCTAGTCTGACGTGTC+CGG 0.391008 2_3:+61653620 Msa0304350:intron
CTTTCTAGTCTGACGTGTCC+GGG 0.391958 2_3:+61653621 Msa0304350:intron
GTGAGATGAAGCCATTGAAT+TGG 0.400250 2_3:-61648515 None:intergenic
AGAAGATCTCGGACGATAAA+GGG 0.403087 2_3:+61653243 Msa0304350:CDS
AATGTAGAAACTGATCCATT+TGG 0.403959 2_3:-61653041 None:intergenic
AAACGTATCACAGGTAGCTT+AGG 0.415749 2_3:+61649520 Msa0304350:intron
TAATCCCTCTTCCAATTCAA+TGG 0.416402 2_3:+61648504 Msa0304350:exon
TACATTGGATCTCTGCTGAT+TGG 0.416759 2_3:-61649702 None:intergenic
CTGCTGATTGGTCATTAGAT+GGG 0.417953 2_3:-61649690 None:intergenic
TTTAATACACAAACCTCAAC+TGG 0.428231 2_3:-61653498 None:intergenic
TTATGTGAGACGGCATCAAT+TGG 0.434687 2_3:+61652757 Msa0304350:CDS
TTAAGAGTGTTGAATACTGC+AGG 0.442291 2_3:-61653941 None:intergenic
GCACTAACATCATTAAAATT+GGG 0.455388 2_3:-61652552 None:intergenic
AAAGAGAGAATGAAGGTTGA+CGG 0.471060 2_3:-61648415 None:intergenic
CTTACAGGAGCAGGAATTGA+AGG 0.477237 2_3:-61652990 None:intergenic
GTACTAGAAGTTGGATCAGT+AGG 0.483887 2_3:+61649611 Msa0304350:CDS
TCAACGAGAAAGAATGAGAA+TGG 0.488105 2_3:-61654015 None:intergenic
TTCTTTATTCCGGGAAATGA+CGG 0.488727 2_3:-61653805 None:intergenic
TGGTGGGCAGCTACCAGTTG+AGG 0.498148 2_3:+61653485 Msa0304350:CDS
TTTGGTTTAGGTGCTTCTGC+GGG 0.511687 2_3:-61653023 None:intergenic
GCAGAAGCACCTAAACCAAA+TGG 0.516816 2_3:+61653026 Msa0304350:CDS
AGTGCATCACCATAACCAAC+TGG 0.518295 2_3:-61653769 None:intergenic
CCTTCTTCATTGTCTATCGA+GGG 0.519793 2_3:+61653092 Msa0304350:CDS
GAGAGAGAAAGAGAGAATGA+AGG 0.522626 2_3:-61648422 None:intergenic
AAAGTATTGAACTTGCACTT+TGG 0.522702 2_3:+61649556 Msa0304350:CDS
GTCACTGCAGTACACTAGAT+TGG 0.524258 2_3:+61649636 Msa0304350:CDS
ATAGACAATGAAGAAGGTAC+TGG 0.526221 2_3:-61653086 None:intergenic
TGCTGATTGGTCATTAGATG+GGG 0.529817 2_3:-61649689 None:intergenic
TAGAATCTTGATGACCTCCC+CGG 0.535783 2_3:-61653639 None:intergenic
ACCTTCTTCATTGTCTATCG+AGG 0.541849 2_3:+61653091 Msa0304350:CDS
GTATTTATACTTACAGGAGC+AGG 0.544888 2_3:-61652999 None:intergenic
ATTTGGTTTAGGTGCTTCTG+CGG 0.545135 2_3:-61653024 None:intergenic
TGAAGCCATTGAATTGGAAG+AGG 0.546926 2_3:-61648509 None:intergenic
AGTTTCTACATTGACAACAT+TGG 0.552501 2_3:+61653052 Msa0304350:CDS
AAAGAATGAGAATGGAGGGT+TGG 0.559129 2_3:-61654007 None:intergenic
TGCTCCTCCTTCATGTAATG+AGG 0.560231 2_3:+61653272 Msa0304350:CDS
CCCTCGATAGACAATGAAGA+AGG 0.562111 2_3:-61653092 None:intergenic
TGTTACATTGAACAGCTTGG+TGG 0.563421 2_3:+61653468 Msa0304350:CDS
AACGTATCACAGGTAGCTTA+GGG 0.563493 2_3:+61649521 Msa0304350:intron
ATTTCACCTGCGTGTAGTGA+GGG 0.566652 2_3:+61652938 Msa0304350:CDS
AATTGTACCTCATTACATGA+AGG 0.567951 2_3:-61653279 None:intergenic
CGAGAAAGAATGAGAATGGA+GGG 0.581044 2_3:-61654011 None:intergenic
GTTACATTGAACAGCTTGGT+GGG 0.584700 2_3:+61653469 Msa0304350:CDS
ATCAAGATTCTAAGAGAGGA+TGG 0.587641 2_3:+61653650 Msa0304350:CDS
GAAGCCATTGAATTGGAAGA+GGG 0.588124 2_3:-61648508 None:intergenic
TTGGCATCTTCAGAAGATCT+CGG 0.594306 2_3:+61653232 Msa0304350:CDS
AAAAGCTGCAGATGAAGGGT+TGG 0.594334 2_3:+61653124 Msa0304350:CDS
ATTTGTTACATTGAACAGCT+TGG 0.595450 2_3:+61653465 Msa0304350:CDS
GATTTCACCTGCGTGTAGTG+AGG 0.596484 2_3:+61652937 Msa0304350:CDS
ACGAGAAAGAATGAGAATGG+AGG 0.597759 2_3:-61654012 None:intergenic
GGTGATAATTCATTCTCCAA+CGG 0.599409 2_3:+61653145 Msa0304350:CDS
TTTCTAGTCTGACGTGTCCG+GGG 0.599859 2_3:+61653622 Msa0304350:intron
ACAGCTGTTTCAAGGTCAGA+AGG 0.607336 2_3:+61652483 Msa0304350:intron
GAACAAGTTATATATATGGT+AGG 0.609147 2_3:+61653902 Msa0304350:three_prime_UTR
TATTCAACACTCTTAAACTG+AGG 0.616680 2_3:+61653948 Msa0304350:three_prime_UTR
GGTCATCAAGATTCTAAGAG+AGG 0.618953 2_3:+61653646 Msa0304350:CDS
TAAGAGTGTTGAATACTGCA+GGG 0.627436 2_3:-61653940 None:intergenic
CTAGTCTGACGTGTCCGGGG+AGG 0.637170 2_3:+61653625 Msa0304350:intron
AGAAGGTACTGGTTTCGAGA+TGG 0.639561 2_3:-61653075 None:intergenic
GGTCACTAACTTATGTGAGA+CGG 0.640399 2_3:+61652747 Msa0304350:CDS
GATTAGAACTTTGACGATGG+TGG 0.641199 2_3:+61648349 Msa0304350:five_prime_UTR
TGTACCTCATTACATGAAGG+AGG 0.650394 2_3:-61653276 None:intergenic
ATTAGAACTTTGACGATGGT+GGG 0.650876 2_3:+61648350 Msa0304350:five_prime_UTR
GCTGTTTCAAGGTCAGAAGG+TGG 0.666496 2_3:+61652486 Msa0304350:intron
TGTGATTAGAACTTTGACGA+TGG 0.679846 2_3:+61648346 Msa0304350:five_prime_UTR
ACAGGAGCAGGAATTGAAGG+AGG 0.687530 2_3:-61652987 None:intergenic
TCAAATCCCTCACTACACGC+AGG 0.704009 2_3:-61652944 None:intergenic
GTGTTTGTGACAGATCCAGT+TGG 0.712286 2_3:+61653754 Msa0304350:intron
AAGATTCTAAGAGAGGATGG+CGG 0.764705 2_3:+61653653 Msa0304350:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAGTGAAAAAAATTT+AGG + chr2_3:61649245-61649264 Msa0304350:intron 10.0%
!!! TATTATTATTTTTGGGTAAT+TGG + chr2_3:61648712-61648731 Msa0304350:intron 15.0%
!! TTGTATAAAAAACAAAAAAC+AGG - chr2_3:61648977-61648996 None:intergenic 15.0%
!!! TTTTTTGTTTTTTATACAAG+AGG + chr2_3:61648978-61648997 Msa0304350:intron 15.0%
!! TGTTTATTTCATTACATAAT+GGG + chr2_3:61649303-61649322 Msa0304350:intron 15.0%
!! ATATTATATGAGTACATATT+CGG + chr2_3:61649984-61650003 Msa0304350:intron 15.0%
!! TCTAAAAAATAAAAATTGAC+CGG + chr2_3:61650630-61650649 Msa0304350:intron 15.0%
!!! AACATAAGCTTTATAAATAA+TGG - chr2_3:61650763-61650782 None:intergenic 15.0%
!! TTATTTATAAAGCTTATGTT+AGG + chr2_3:61650763-61650782 Msa0304350:intron 15.0%
!! TTATGATCAATAAAAATTCA+GGG - chr2_3:61650810-61650829 None:intergenic 15.0%
!! TAAGTAAAAAAAATTAACGA+AGG + chr2_3:61650827-61650846 Msa0304350:intron 15.0%
!! ATAAAGATTAATGTGTATTT+AGG - chr2_3:61651056-61651075 None:intergenic 15.0%
!!! TTGTTTTCAATTAAATTTTC+CGG - chr2_3:61651826-61651845 None:intergenic 15.0%
!! TTTAAACAGATAAAAAATAG+AGG - chr2_3:61653690-61653709 None:intergenic 15.0%
!! GAGGTTAAAAAAAATATACT+AGG - chr2_3:61648582-61648601 None:intergenic 20.0%
!!! AAAACATTGATATTGTTTTG+AGG - chr2_3:61648601-61648620 None:intergenic 20.0%
!! TAAAGTATATTCTCACAAAA+AGG + chr2_3:61648860-61648879 Msa0304350:intron 20.0%
!! AAAGTATATTCTCACAAAAA+GGG + chr2_3:61648861-61648880 Msa0304350:intron 20.0%
!! TGAAAAGAAATTCAAATGAT+TGG + chr2_3:61649038-61649057 Msa0304350:intron 20.0%
!! GTGTTTATTTCATTACATAA+TGG + chr2_3:61649302-61649321 Msa0304350:intron 20.0%
!!! TTAGAATGGTTTTTATTGTT+TGG + chr2_3:61649467-61649486 Msa0304350:intron 20.0%
!! AAAGAATAAAGAACTTACAT+TGG - chr2_3:61649720-61649739 None:intergenic 20.0%
!!! TTTTTTTTTTTGTCCTACTT+CGG + chr2_3:61649848-61649867 Msa0304350:intron 20.0%
!! TATTATATGAGTACATATTC+GGG + chr2_3:61649985-61650004 Msa0304350:intron 20.0%
!!! CAATTACCATATTTTCATTT+TGG - chr2_3:61650154-61650173 None:intergenic 20.0%
!! TGAAAATATGGTAATTGTTT+AGG + chr2_3:61650157-61650176 Msa0304350:intron 20.0%
!! AGTAATATACTCATATACAT+TGG + chr2_3:61650213-61650232 Msa0304350:intron 20.0%
!!! AATAGACTTAACATTCATTT+TGG + chr2_3:61650322-61650341 Msa0304350:intron 20.0%
!! ATTGATATTAACTTTCTTCA+GGG - chr2_3:61650350-61650369 None:intergenic 20.0%
!! AATTGATATTAACTTTCTTC+AGG - chr2_3:61650351-61650370 None:intergenic 20.0%
!!! ATTGTTGTAACATTTTTAGA+AGG - chr2_3:61650409-61650428 None:intergenic 20.0%
!!! ATTCATGTAATTTTCTACAA+TGG - chr2_3:61650473-61650492 None:intergenic 20.0%
!! TATGATCAATAAAAATTCAG+GGG - chr2_3:61650809-61650828 None:intergenic 20.0%
!! CTTATGATCAATAAAAATTC+AGG - chr2_3:61650811-61650830 None:intergenic 20.0%
!! GATAAAAAATAAGAAAGAGT+AGG + chr2_3:61651868-61651887 Msa0304350:intron 20.0%
!!! GTACAGATTTGTATTATTTT+GGG - chr2_3:61651952-61651971 None:intergenic 20.0%
!!! CAAAGAGATTTAAGTTATAT+AGG - chr2_3:61652713-61652732 None:intergenic 20.0%
!!! TTTTAGAGTAGATTATTGAA+AGG - chr2_3:61653202-61653221 None:intergenic 20.0%
!! GTAATAGTAACTATAGTAAA+TGG - chr2_3:61653566-61653585 None:intergenic 20.0%
!! TACTATAGTTACTATTACAA+TGG + chr2_3:61653568-61653587 Msa0304350:intron 20.0%
!!! AACATAATGACATTTTTATG+TGG + chr2_3:61653708-61653727 Msa0304350:intron 20.0%
!! TTGAGAACAAGTTATATATA+TGG + chr2_3:61653898-61653917 Msa0304350:three_prime_UTR 20.0%
!! AAGTTCTAATCACATGTTAA+TGG - chr2_3:61648340-61648359 None:intergenic 25.0%
!! TATTTTACAACTGGTAAGTT+GGG - chr2_3:61648394-61648413 None:intergenic 25.0%
!!! TTATTTTACAACTGGTAAGT+TGG - chr2_3:61648395-61648414 None:intergenic 25.0%
! TAGGAATTGTAAAGAAAAGA+AGG - chr2_3:61648563-61648582 None:intergenic 25.0%
! AAAGAAATTCAAATGATTGG+TGG + chr2_3:61649041-61649060 Msa0304350:intron 25.0%
!! AAGCTAGTTTATATAAGCTT+GGG + chr2_3:61649211-61649230 Msa0304350:intron 25.0%
! TTTGTTCTTAGAACTTAGAA+TGG + chr2_3:61649453-61649472 Msa0304350:intron 25.0%
!!! ACAAATAACCATCATTTTTG+GGG - chr2_3:61649494-61649513 None:intergenic 25.0%
!!! CACAAATAACCATCATTTTT+GGG - chr2_3:61649495-61649514 None:intergenic 25.0%
!! ACACAAATAACCATCATTTT+TGG - chr2_3:61649496-61649515 None:intergenic 25.0%
! GTAATTGAGTAATAGAACAA+TGG - chr2_3:61649783-61649802 None:intergenic 25.0%
!!! GATGGTAGAAATTTTTCAAT+AGG - chr2_3:61649812-61649831 None:intergenic 25.0%
! TATAGTGTAAGATATACTTC+TGG - chr2_3:61649960-61649979 None:intergenic 25.0%
! ATTATATGAGTACATATTCG+GGG + chr2_3:61649986-61650005 Msa0304350:intron 25.0%
! TGCTATGTTAGTATTATTGA+CGG - chr2_3:61650012-61650031 None:intergenic 25.0%
!!! ATATTTTCATTTTGGCACAA+GGG - chr2_3:61650146-61650165 None:intergenic 25.0%
! ATGGTAATTGTTTAGGAATT+TGG + chr2_3:61650164-61650183 Msa0304350:intron 25.0%
!! TTTTACGCAAGAAAATACAT+TGG + chr2_3:61650245-61650264 Msa0304350:intron 25.0%
!! TGTTTAAAATAATGATCTCC+AGG + chr2_3:61650292-61650311 Msa0304350:intron 25.0%
!! TTAAGTCTATTCTTTTTACC+TGG - chr2_3:61650313-61650332 None:intergenic 25.0%
! ATATCAACTTTCAATGATTG+AGG - chr2_3:61650438-61650457 None:intergenic 25.0%
!! ATGTAATTTTCTACAATGGA+GGG - chr2_3:61650469-61650488 None:intergenic 25.0%
!!! AAGTCATTTTTCATGATTGA+GGG + chr2_3:61650533-61650552 Msa0304350:intron 25.0%
! TAGTAATGTAAATTACACTC+CGG - chr2_3:61650652-61650671 None:intergenic 25.0%
! TAAACGGTATTTGTGTATTT+AGG - chr2_3:61651028-61651047 None:intergenic 25.0%
!! GTGTATTTAGGTCTTTTAAA+CGG - chr2_3:61651044-61651063 None:intergenic 25.0%
! AAAGGTTTATTATAGGAAGA+AGG - chr2_3:61651091-61651110 None:intergenic 25.0%
! TATGAACATGAACAGATATT+TGG + chr2_3:61651226-61651245 Msa0304350:intron 25.0%
!!! GACAAAATCCTTTTTAGAAA+AGG + chr2_3:61651411-61651430 Msa0304350:intron 25.0%
!! GGTACAGATTTGTATTATTT+TGG - chr2_3:61651953-61651972 None:intergenic 25.0%
! AATTATCATGTATAGATAGG+AGG - chr2_3:61651999-61652018 None:intergenic 25.0%
! TCGAATTATCATGTATAGAT+AGG - chr2_3:61652002-61652021 None:intergenic 25.0%
!!! GCTAGGGAATTTTTAATTAA+CGG - chr2_3:61652033-61652052 None:intergenic 25.0%
!!! GTTTTGAAAATCAAACAATG+TGG - chr2_3:61652196-61652215 None:intergenic 25.0%
!!! AACTCTGTTAGTTTTTATCA+AGG + chr2_3:61652213-61652232 Msa0304350:intron 25.0%
! AATTTAACAGTTTCAGTTCT+CGG - chr2_3:61652364-61652383 None:intergenic 25.0%
! TAAAGCAATTGAAATTTGTG+TGG + chr2_3:61652390-61652409 Msa0304350:intron 25.0%
! GATATGTATATATCATAGTC+TGG + chr2_3:61652429-61652448 Msa0304350:intron 25.0%
! AGCTGTTTATCATCAAAAAA+AGG - chr2_3:61652469-61652488 None:intergenic 25.0%
! GCACTAACATCATTAAAATT+GGG - chr2_3:61652555-61652574 None:intergenic 25.0%
! TGCACTAACATCATTAAAAT+TGG - chr2_3:61652556-61652575 None:intergenic 25.0%
!!! TTTGTTTTATTGATGCTGAA+TGG - chr2_3:61652627-61652646 None:intergenic 25.0%
! TATAACTTAAATCTCTTTGC+AGG + chr2_3:61652714-61652733 Msa0304350:intron 25.0%
! TAGAGTACGTGAAAAATATT+GGG - chr2_3:61652841-61652860 None:intergenic 25.0%
! ATAGAGTACGTGAAAAATAT+TGG - chr2_3:61652842-61652861 None:intergenic 25.0%
! ATATATATCATTTGGAGGTT+GGG - chr2_3:61652907-61652926 None:intergenic 25.0%
! TCAAGCTGATATATATCATT+TGG - chr2_3:61652915-61652934 None:intergenic 25.0%
! AATGATATATATCAGCTTGA+TGG + chr2_3:61652915-61652934 Msa0304350:intron 25.0%
! ATATTGAAGCTTCTTTATTC+CGG - chr2_3:61653818-61653837 None:intergenic 25.0%
! GAACAAGTTATATATATGGT+AGG + chr2_3:61653902-61653921 Msa0304350:three_prime_UTR 25.0%
! ATTTTACAACTGGTAAGTTG+GGG - chr2_3:61648393-61648412 None:intergenic 30.0%
AAAGAAGGAGAAGTAGAAAA+AGG - chr2_3:61648548-61648567 None:intergenic 30.0%
!!! TTATACAAGAGGCTGTTTTT+AGG + chr2_3:61648989-61649008 Msa0304350:intron 30.0%
! TTTCTTTTCATGTGACTGAA+AGG - chr2_3:61649028-61649047 None:intergenic 30.0%
TTTGGAGACTGCATAATTAA+GGG + chr2_3:61649113-61649132 Msa0304350:intron 30.0%
! TTTTACAACCAAACAAAACG+AGG + chr2_3:61649166-61649185 Msa0304350:intron 30.0%
TTTACAACCAAACAAAACGA+GGG + chr2_3:61649167-61649186 Msa0304350:intron 30.0%
! CAAGCTAGTTTATATAAGCT+TGG + chr2_3:61649210-61649229 Msa0304350:intron 30.0%
GCAACCTTTGTAACATTTAT+AGG + chr2_3:61649345-61649364 Msa0304350:intron 30.0%
GTTGCCTATAAATGTTACAA+AGG - chr2_3:61649352-61649371 None:intergenic 30.0%
GTATGTATTGTTCATGCAAA+TGG + chr2_3:61649417-61649436 Msa0304350:intron 30.0%
!! AAAGTATTGAACTTGCACTT+TGG + chr2_3:61649556-61649575 Msa0304350:CDS 30.0%
!! AACATTTTGGTACTAGAAGT+TGG + chr2_3:61649602-61649621 Msa0304350:CDS 30.0%
AATGCATGTGAAATCATTGA+TGG - chr2_3:61649830-61649849 None:intergenic 30.0%
!! TATTTTCATTTTGGCACAAG+GGG - chr2_3:61650145-61650164 None:intergenic 30.0%
!! CATATTTTCATTTTGGCACA+AGG - chr2_3:61650147-61650166 None:intergenic 30.0%
CTTGTGCCAAAATGAAAATA+TGG + chr2_3:61650145-61650164 Msa0304350:intron 30.0%
!! ACATTTTTAGAAGGCCAAAT+TGG - chr2_3:61650400-61650419 None:intergenic 30.0%
! CATGTAATTTTCTACAATGG+AGG - chr2_3:61650470-61650489 None:intergenic 30.0%
!!! GAAGTCATTTTTCATGATTG+AGG + chr2_3:61650532-61650551 Msa0304350:intron 30.0%
ATTGATGTCACCTATATCTT+TGG + chr2_3:61650586-61650605 Msa0304350:intron 30.0%
TTATTGTCCTCCAAAGATAT+AGG - chr2_3:61650599-61650618 None:intergenic 30.0%
! TATCTTTGGAGGACAATAAT+AGG + chr2_3:61650600-61650619 Msa0304350:intron 30.0%
TGAAAATTGCTTAGCTAAAC+TGG - chr2_3:61650881-61650900 None:intergenic 30.0%
!! CCTTTTATAAAGAGAAGCAT+GGG - chr2_3:61650925-61650944 None:intergenic 30.0%
! ACCTTTTATAAAGAGAAGCA+TGG - chr2_3:61650926-61650945 None:intergenic 30.0%
TGCTTCTCTTTATAAAAGGT+TGG + chr2_3:61650926-61650945 Msa0304350:intron 30.0%
!! GGTTGTTATTTCTGTTTAGT+TGG - chr2_3:61650981-61651000 None:intergenic 30.0%
! TTACTGTTAGATCTTTTTGC+AGG - chr2_3:61651002-61651021 None:intergenic 30.0%
!! AGGCTCTAAAGGTTTATTAT+AGG - chr2_3:61651098-61651117 None:intergenic 30.0%
! TTTAAAATCAAACTGCTCAG+AGG - chr2_3:61651274-61651293 None:intergenic 30.0%
! AACACTAACCTACAAGTTTT+GGG - chr2_3:61651462-61651481 None:intergenic 30.0%
ACAGATATGATCAGAACAAT+TGG - chr2_3:61651531-61651550 None:intergenic 30.0%
AATTGTTCTGATCATATCTG+TGG + chr2_3:61651530-61651549 Msa0304350:intron 30.0%
AGAAAACCAAGATCCAAATT+GGG - chr2_3:61651565-61651584 None:intergenic 30.0%
AAGAAAACCAAGATCCAAAT+TGG - chr2_3:61651566-61651585 None:intergenic 30.0%
TCAAACCAATTGTTAGAAAC+CGG + chr2_3:61651804-61651823 Msa0304350:intron 30.0%
! ATTTTCCGGTTTCTAACAAT+TGG - chr2_3:61651812-61651831 None:intergenic 30.0%
!! TATTTTGGGTGAATAGACAA+TGG - chr2_3:61651938-61651957 None:intergenic 30.0%
AATGAGTTAGAGAAAGGATA+TGG - chr2_3:61651974-61651993 None:intergenic 30.0%
GTTAGTTAGGATATAGGATA+AGG - chr2_3:61652064-61652083 None:intergenic 30.0%
TAAGGAGTTAGTTAGGATAT+AGG - chr2_3:61652070-61652089 None:intergenic 30.0%
! AGTTTTTATCAAGGTTCTGT+TGG + chr2_3:61652222-61652241 Msa0304350:intron 30.0%
!! TCTGTTGGTTTATGTCAATA+TGG + chr2_3:61652237-61652256 Msa0304350:intron 30.0%
!! CTGTTGGTTTATGTCAATAT+GGG + chr2_3:61652238-61652257 Msa0304350:intron 30.0%
TCTGAAGAGATTAAATCTTC+TGG + chr2_3:61652510-61652529 Msa0304350:CDS 30.0%
CAATGAAGAAGAAACAACAA+AGG - chr2_3:61652877-61652896 None:intergenic 30.0%
GATATATATCATTTGGAGGT+TGG - chr2_3:61652908-61652927 None:intergenic 30.0%
AGCTGATATATATCATTTGG+AGG - chr2_3:61652912-61652931 None:intergenic 30.0%
AATGTAGAAACTGATCCATT+TGG - chr2_3:61653044-61653063 None:intergenic 30.0%
AGTTTCTACATTGACAACAT+TGG + chr2_3:61653052-61653071 Msa0304350:CDS 30.0%
AATTGTACCTCATTACATGA+AGG - chr2_3:61653282-61653301 None:intergenic 30.0%
ATGTAATGAGGTACAATTGA+AGG + chr2_3:61653284-61653303 Msa0304350:intron 30.0%
! ATTTGTTACATTGAACAGCT+TGG + chr2_3:61653465-61653484 Msa0304350:CDS 30.0%
TTTAATACACAAACCTCAAC+TGG - chr2_3:61653501-61653520 None:intergenic 30.0%
CAGACTAGAAAGAAATTTGA+AGG - chr2_3:61653613-61653632 None:intergenic 30.0%
TATTGAAGCTTCTTTATTCC+GGG - chr2_3:61653817-61653836 None:intergenic 30.0%
TATTCAACACTCTTAAACTG+AGG + chr2_3:61653948-61653967 Msa0304350:three_prime_UTR 30.0%
!!! TGAGGTTATTTTTTCCCAAA+AGG + chr2_3:61653966-61653985 Msa0304350:three_prime_UTR 30.0%
!!! GAGGTTATTTTTTCCCAAAA+GGG + chr2_3:61653967-61653986 Msa0304350:three_prime_UTR 30.0%
! TTATCCTTATCTTCCCTTTT+GGG - chr2_3:61653983-61654002 None:intergenic 30.0%
! TTTATCCTTATCTTCCCTTT+TGG - chr2_3:61653984-61654003 None:intergenic 30.0%
TGTGATTAGAACTTTGACGA+TGG + chr2_3:61648346-61648365 Msa0304350:five_prime_UTR 35.0%
ATTAGAACTTTGACGATGGT+GGG + chr2_3:61648350-61648369 Msa0304350:five_prime_UTR 35.0%
!! GTTGACGGTTATTTTACAAC+TGG - chr2_3:61648403-61648422 None:intergenic 35.0%
AAAGAGAGAATGAAGGTTGA+CGG - chr2_3:61648418-61648437 None:intergenic 35.0%
TAATCCCTCTTCCAATTCAA+TGG + chr2_3:61648504-61648523 Msa0304350:exon 35.0%
GTTTGGAGACTGCATAATTA+AGG + chr2_3:61649112-61649131 Msa0304350:intron 35.0%
GGTTTATCGTGTAAATGCTT+AGG + chr2_3:61649134-61649153 Msa0304350:intron 35.0%
TAAACACTTGTGTAAGTGCT+TGG - chr2_3:61649289-61649308 None:intergenic 35.0%
ACAAAATGACTCTCAACGAT+AGG - chr2_3:61649386-61649405 None:intergenic 35.0%
! TGTGTCATTAAACGTATCAC+AGG + chr2_3:61649511-61649530 Msa0304350:intron 35.0%
! GTTGAGCTTTCACAACATTT+TGG + chr2_3:61649589-61649608 Msa0304350:CDS 35.0%
!!! TTTTTTTGTCCTACTTCGGA+CGG + chr2_3:61649852-61649871 Msa0304350:intron 35.0%
TGTTGATGTCATACTGTATG+TGG + chr2_3:61649904-61649923 Msa0304350:intron 35.0%
AGTGTATAGTGTAAACACTC+AGG + chr2_3:61649932-61649951 Msa0304350:intron 35.0%
CATTACATTAGCTAGCAAGA+GGG - chr2_3:61650063-61650082 None:intergenic 35.0%
CTCTTGCTAGCTAATGTAAT+GGG + chr2_3:61650062-61650081 Msa0304350:intron 35.0%
!! TAGCTAATGTAATGGGCATT+GGG + chr2_3:61650069-61650088 Msa0304350:intron 35.0%
AACAAAACAGGCAACAAACA+AGG - chr2_3:61650117-61650136 None:intergenic 35.0%
!! ATTTTCATTTTGGCACAAGG+GGG - chr2_3:61650144-61650163 None:intergenic 35.0%
TAAACCTGGACTTTCTTTGA+AGG + chr2_3:61650558-61650577 Msa0304350:intron 35.0%
AAAGCTTATGTTAGGATCTC+TGG + chr2_3:61650771-61650790 Msa0304350:intron 35.0%
CCCATGCTTCTCTTTATAAA+AGG + chr2_3:61650922-61650941 Msa0304350:intron 35.0%
GAAAATCAGTAAGTGTTTGC+TGG + chr2_3:61651140-61651159 Msa0304350:intron 35.0%
CCACAAGAACACATTTATCA+AGG - chr2_3:61651387-61651406 None:intergenic 35.0%
CCTTGATAAATGTGTTCTTG+TGG + chr2_3:61651384-61651403 Msa0304350:intron 35.0%
!! AGGCACAACCTTTTCTAAAA+AGG - chr2_3:61651422-61651441 None:intergenic 35.0%
! CAACACTAACCTACAAGTTT+TGG - chr2_3:61651463-61651482 None:intergenic 35.0%
ATGATCAGAACAATTGGAGA+GGG - chr2_3:61651525-61651544 None:intergenic 35.0%
TATGATCAGAACAATTGGAG+AGG - chr2_3:61651526-61651545 None:intergenic 35.0%
GTGGAAAATGATTCCCAATT+TGG + chr2_3:61651549-61651568 Msa0304350:intron 35.0%
ATGATTCCCAATTTGGATCT+TGG + chr2_3:61651556-61651575 Msa0304350:intron 35.0%
TTACGTCCATAAGTTGCATT+GGG - chr2_3:61651640-61651659 None:intergenic 35.0%
ATTACGTCCATAAGTTGCAT+TGG - chr2_3:61651641-61651660 None:intergenic 35.0%
GAGGATAATGAGTTAGAGAA+AGG - chr2_3:61651980-61651999 None:intergenic 35.0%
AGTTAGGATATAGGATAAGG+AGG - chr2_3:61652061-61652080 None:intergenic 35.0%
CATAGGATAAGGAGTTAGTT+AGG - chr2_3:61652077-61652096 None:intergenic 35.0%
ATCTGTTAGGACATAGGATA+AGG - chr2_3:61652088-61652107 None:intergenic 35.0%
CTATGTCCTAACAGATTCAT+GGG + chr2_3:61652092-61652111 Msa0304350:intron 35.0%
TATGTCCTAACAGATTCATG+GGG + chr2_3:61652093-61652112 Msa0304350:intron 35.0%
GAAAATCAAACAATGTGGAC+TGG - chr2_3:61652191-61652210 None:intergenic 35.0%
TGTCAATATGGGATTCTATG+AGG + chr2_3:61652249-61652268 Msa0304350:intron 35.0%
CTCATATGTTCATGCATTCA+TGG + chr2_3:61652278-61652297 Msa0304350:intron 35.0%
! GATGATAAACAGCTGTTTCA+AGG + chr2_3:61652475-61652494 Msa0304350:intron 35.0%
AACTTAAATCTCTTTGCAGG+TGG + chr2_3:61652717-61652736 Msa0304350:intron 35.0%
GTATTTATACTTACAGGAGC+AGG - chr2_3:61653002-61653021 None:intergenic 35.0%
! GAAACTGATCCATTTGGTTT+AGG - chr2_3:61653038-61653057 None:intergenic 35.0%
! ATAGACAATGAAGAAGGTAC+TGG - chr2_3:61653089-61653108 None:intergenic 35.0%
TAGAAAAAGCTGCAGATGAA+GGG + chr2_3:61653120-61653139 Msa0304350:CDS 35.0%
GGTGATAATTCATTCTCCAA+CGG + chr2_3:61653145-61653164 Msa0304350:CDS 35.0%
!!! TTGTTTTAGAGTCTTACCGT+TGG - chr2_3:61653164-61653183 None:intergenic 35.0%
GATTTCTCAACATACACATG+AGG - chr2_3:61653374-61653393 None:intergenic 35.0%
TTGACAGATGCAAAAAGTTG+AGG + chr2_3:61653431-61653450 Msa0304350:intron 35.0%
! ATCAAGATTCTAAGAGAGGA+TGG + chr2_3:61653650-61653669 Msa0304350:CDS 35.0%
TTCTTTATTCCGGGAAATGA+CGG - chr2_3:61653808-61653827 None:intergenic 35.0%
!! TAAGAGTGTTGAATACTGCA+GGG - chr2_3:61653943-61653962 None:intergenic 35.0%
!! TTAAGAGTGTTGAATACTGC+AGG - chr2_3:61653944-61653963 None:intergenic 35.0%
! TTTTCCCAAAAGGGAAGATA+AGG + chr2_3:61653976-61653995 Msa0304350:three_prime_UTR 35.0%
GATTAGAACTTTGACGATGG+TGG + chr2_3:61648349-61648368 Msa0304350:five_prime_UTR 40.0%
GAGAGAGAAAGAGAGAATGA+AGG - chr2_3:61648425-61648444 None:intergenic 40.0%
GAAGCCATTGAATTGGAAGA+GGG - chr2_3:61648511-61648530 None:intergenic 40.0%
TGAAGCCATTGAATTGGAAG+AGG - chr2_3:61648512-61648531 None:intergenic 40.0%
GTGAGATGAAGCCATTGAAT+TGG - chr2_3:61648518-61648537 None:intergenic 40.0%
GCATCAACACTTCTGATTGA+TGG - chr2_3:61648825-61648844 None:intergenic 40.0%
AATCTCCAAACACAAACCCT+AGG + chr2_3:61649074-61649093 Msa0304350:intron 40.0%
ATCTCCAAACACAAACCCTA+GGG + chr2_3:61649075-61649094 Msa0304350:intron 40.0%
ACAAACCCTAGGGATCATTA+AGG + chr2_3:61649085-61649104 Msa0304350:intron 40.0%
AACCAAACAAAACGAGGGAA+AGG + chr2_3:61649172-61649191 Msa0304350:intron 40.0%
!! AACCTTTCCCTCGTTTTGTT+TGG - chr2_3:61649177-61649196 None:intergenic 40.0%
TGTTTGGACCCCAAAAATGA+TGG + chr2_3:61649483-61649502 Msa0304350:intron 40.0%
AAACGTATCACAGGTAGCTT+AGG + chr2_3:61649520-61649539 Msa0304350:intron 40.0%
AACGTATCACAGGTAGCTTA+GGG + chr2_3:61649521-61649540 Msa0304350:intron 40.0%
GTACTAGAAGTTGGATCAGT+AGG + chr2_3:61649611-61649630 Msa0304350:CDS 40.0%
! TGCTGATTGGTCATTAGATG+GGG - chr2_3:61649692-61649711 None:intergenic 40.0%
! CTGCTGATTGGTCATTAGAT+GGG - chr2_3:61649693-61649712 None:intergenic 40.0%
! TCTGCTGATTGGTCATTAGA+TGG - chr2_3:61649694-61649713 None:intergenic 40.0%
TACATTGGATCTCTGCTGAT+TGG - chr2_3:61649705-61649724 None:intergenic 40.0%
! GGACGGAAATGATGTGTTTT+AGG + chr2_3:61649869-61649888 Msa0304350:intron 40.0%
! TAAGGCCAGGGATTGATAAT+TGG - chr2_3:61650037-61650056 None:intergenic 40.0%
CCATTACATTAGCTAGCAAG+AGG - chr2_3:61650064-61650083 None:intergenic 40.0%
CCTCTTGCTAGCTAATGTAA+TGG + chr2_3:61650061-61650080 Msa0304350:intron 40.0%
!! CTAGCTAATGTAATGGGCAT+TGG + chr2_3:61650068-61650087 Msa0304350:intron 40.0%
AATCCCTCAATCACAGAAAG+CGG + chr2_3:61650372-61650391 Msa0304350:intron 40.0%
TCCCACTTGTGATTCGTAAA+CGG + chr2_3:61650497-61650516 Msa0304350:intron 40.0%
TCCGTTTACGAATCACAAGT+GGG - chr2_3:61650501-61650520 None:intergenic 40.0%
TTCCGTTTACGAATCACAAG+TGG - chr2_3:61650502-61650521 None:intergenic 40.0%
TTGTCCTTCAAAGAAAGTCC+AGG - chr2_3:61650565-61650584 None:intergenic 40.0%
GATGTCACCTATATCTTTGG+AGG + chr2_3:61650589-61650608 Msa0304350:intron 40.0%
TGAATCTCTTCCTAGAGAGA+AGG - chr2_3:61651118-61651137 None:intergenic 40.0%
! CTCGACAATTGGTTCATCTT+CGG + chr2_3:61651193-61651212 Msa0304350:intron 40.0%
CACCAAGAATCTTTGTTCTC+GGG - chr2_3:61651357-61651376 None:intergenic 40.0%
CCACCAAGAATCTTTGTTCT+CGG - chr2_3:61651358-61651377 None:intergenic 40.0%
! TTTGGGTGAGTTGAACAAGT+TGG - chr2_3:61651445-61651464 None:intergenic 40.0%
TCAACTCACCCAAAACTTGT+AGG + chr2_3:61651451-61651470 Msa0304350:intron 40.0%
GCTAAGGCTGAAAAGTTCTT+TGG - chr2_3:61651678-61651697 None:intergenic 40.0%
!! TAACAATTGGTTTGACCTGC+TGG - chr2_3:61651799-61651818 None:intergenic 40.0%
GTAGAATAGCAGATCCTTAG+AGG - chr2_3:61651908-61651927 None:intergenic 40.0%
CCATGAATCTGTTAGGACAT+AGG - chr2_3:61652094-61652113 None:intergenic 40.0%
CCTATGTCCTAACAGATTCA+TGG + chr2_3:61652091-61652110 Msa0304350:intron 40.0%
ATGTCCTAACAGATTCATGG+GGG + chr2_3:61652094-61652113 Msa0304350:intron 40.0%
TGCAAACTAGTGTATGCAGT+TGG - chr2_3:61652129-61652148 None:intergenic 40.0%
GGTCACTAACTTATGTGAGA+CGG + chr2_3:61652747-61652766 Msa0304350:CDS 40.0%
TTATGTGAGACGGCATCAAT+TGG + chr2_3:61652757-61652776 Msa0304350:CDS 40.0%
GCGGGTGTATTTATACTTAC+AGG - chr2_3:61653008-61653027 None:intergenic 40.0%
! ATTTGGTTTAGGTGCTTCTG+CGG - chr2_3:61653027-61653046 None:intergenic 40.0%
ACCTTCTTCATTGTCTATCG+AGG + chr2_3:61653091-61653110 Msa0304350:CDS 40.0%
CCTTCTTCATTGTCTATCGA+GGG + chr2_3:61653092-61653111 Msa0304350:CDS 40.0%
!! CTTCATCTGCAGCTTTTTCT+AGG - chr2_3:61653121-61653140 None:intergenic 40.0%
CTAGAAAAAGCTGCAGATGA+AGG + chr2_3:61653119-61653138 Msa0304350:CDS 40.0%
!! ATCTACTCTAAAACCAGAGC+AGG + chr2_3:61653209-61653228 Msa0304350:intron 40.0%
TTGGCATCTTCAGAAGATCT+CGG + chr2_3:61653232-61653251 Msa0304350:CDS 40.0%
AGAAGATCTCGGACGATAAA+GGG + chr2_3:61653243-61653262 Msa0304350:CDS 40.0%
TGTACCTCATTACATGAAGG+AGG - chr2_3:61653279-61653298 None:intergenic 40.0%
!! GGCCTTTCCTTCTCATTTTT+CGG + chr2_3:61653305-61653324 Msa0304350:intron 40.0%
!! GCCTTTCCTTCTCATTTTTC+GGG + chr2_3:61653306-61653325 Msa0304350:intron 40.0%
!!! TTTCCTTCTCATTTTTCGGG+CGG + chr2_3:61653309-61653328 Msa0304350:intron 40.0%
CAGATGCAAAAAGTTGAGGA+CGG + chr2_3:61653435-61653454 Msa0304350:intron 40.0%
AGATGCAAAAAGTTGAGGAC+GGG + chr2_3:61653436-61653455 Msa0304350:intron 40.0%
TGTTACATTGAACAGCTTGG+TGG + chr2_3:61653468-61653487 Msa0304350:CDS 40.0%
GTTACATTGAACAGCTTGGT+GGG + chr2_3:61653469-61653488 Msa0304350:CDS 40.0%
GATGAGAATCTGAAAGAGCT+AGG - chr2_3:61653531-61653550 None:intergenic 40.0%
! GGTCATCAAGATTCTAAGAG+AGG + chr2_3:61653646-61653665 Msa0304350:CDS 40.0%
! AAGATTCTAAGAGAGGATGG+CGG + chr2_3:61653653-61653672 Msa0304350:CDS 40.0%
AAAGAATGAGAATGGAGGGT+TGG - chr2_3:61654010-61654029 None:intergenic 40.0%
! GCGGGAGCTTTTTAATGCAT+CGG - chr2_3:61648898-61648917 None:intergenic 45.0%
AAAATAGTGAGACCCCTTCC+CGG - chr2_3:61648932-61648951 None:intergenic 45.0%
TGATCCCTAGGGTTTGTGTT+TGG - chr2_3:61649082-61649101 None:intergenic 45.0%
AACCCTAGGGATCATTAAGG+AGG + chr2_3:61649088-61649107 Msa0304350:intron 45.0%
CACCTCCTTAATGATCCCTA+GGG - chr2_3:61649093-61649112 None:intergenic 45.0%
ACACCTCCTTAATGATCCCT+AGG - chr2_3:61649094-61649113 None:intergenic 45.0%
!! GGGATCATTAAGGAGGTGTT+TGG + chr2_3:61649095-61649114 Msa0304350:intron 45.0%
GTCACTGCAGTACACTAGAT+TGG + chr2_3:61649636-61649655 Msa0304350:CDS 45.0%
ACATCATTTCCGTCCGAAGT+AGG - chr2_3:61649864-61649883 None:intergenic 45.0%
GCATGCCAATTATCAATCCC+TGG + chr2_3:61650029-61650048 Msa0304350:intron 45.0%
TAGCTAGCAAGAGGGATGTA+AGG - chr2_3:61650055-61650074 None:intergenic 45.0%
ACAAGGCTAGGTCCTTAGAA+GGG - chr2_3:61650100-61650119 None:intergenic 45.0%
AACAAGGCTAGGTCCTTAGA+AGG - chr2_3:61650101-61650120 None:intergenic 45.0%
AACAGGCAACAAACAAGGCT+AGG - chr2_3:61650112-61650131 None:intergenic 45.0%
CAAGGGGGAAGAAACAAAAC+AGG - chr2_3:61650129-61650148 None:intergenic 45.0%
CATGATTGAGGGACTAAACC+TGG + chr2_3:61650544-61650563 Msa0304350:intron 45.0%
AGCACTGTCTTCTTTCACAC+TGG + chr2_3:61650850-61650869 Msa0304350:intron 45.0%
!! ACCTTTAGAGCCTTCTCTCT+AGG + chr2_3:61651105-61651124 Msa0304350:intron 45.0%
! TCCTAGAGAGAAGGCTCTAA+AGG - chr2_3:61651109-61651128 None:intergenic 45.0%
ATCGAGGTTGTTATCGAGGT+CGG - chr2_3:61651173-61651192 None:intergenic 45.0%
ACAACCTCGATCTCGACAAT+TGG + chr2_3:61651182-61651201 Msa0304350:intron 45.0%
TGAACCAATTGTCGAGATCG+AGG - chr2_3:61651189-61651208 None:intergenic 45.0%
! ATGAGACTAGTCCAAGGGTT+TGG - chr2_3:61651319-61651338 None:intergenic 45.0%
TGTTCTCGGGCAAGAAAGTT+GGG - chr2_3:61651344-61651363 None:intergenic 45.0%
TTGTTCTCGGGCAAGAAAGT+TGG - chr2_3:61651345-61651364 None:intergenic 45.0%
TGCCCGAGAACAAAGATTCT+TGG + chr2_3:61651352-61651371 Msa0304350:intron 45.0%
CCGAGAACAAAGATTCTTGG+TGG + chr2_3:61651355-61651374 Msa0304350:intron 45.0%
TTGTTACAGGGGATCGACAA+TGG - chr2_3:61651493-61651512 None:intergenic 45.0%
TGAACGCCCAATGCAACTTA+TGG + chr2_3:61651631-61651650 Msa0304350:intron 45.0%
CCTTAGCAATCCAACCAACA+GGG + chr2_3:61651691-61651710 Msa0304350:intron 45.0%
GGAGGACATGTGAGCTAAAA+GGG - chr2_3:61651745-61651764 None:intergenic 45.0%
AGAGATCTCTCTCTCCTCTA+AGG + chr2_3:61651891-61651910 Msa0304350:intron 45.0%
! ACAGCTGTTTCAAGGTCAGA+AGG + chr2_3:61652483-61652502 Msa0304350:intron 45.0%
CTCTTTGCAGGTGGAATTCT+TGG + chr2_3:61652726-61652745 Msa0304350:intron 45.0%
ATTTCACCTGCGTGTAGTGA+GGG + chr2_3:61652938-61652957 Msa0304350:CDS 45.0%
CTTACAGGAGCAGGAATTGA+AGG - chr2_3:61652993-61653012 None:intergenic 45.0%
! TTTGGTTTAGGTGCTTCTGC+GGG - chr2_3:61653026-61653045 None:intergenic 45.0%
!! GCAGAAGCACCTAAACCAAA+TGG + chr2_3:61653026-61653045 Msa0304350:CDS 45.0%
!! AGAAGGTACTGGTTTCGAGA+TGG - chr2_3:61653078-61653097 None:intergenic 45.0%
CCCTCGATAGACAATGAAGA+AGG - chr2_3:61653095-61653114 None:intergenic 45.0%
AAAAGCTGCAGATGAAGGGT+TGG + chr2_3:61653124-61653143 Msa0304350:CDS 45.0%
!! ACTCTAAAACCAGAGCAGGT+TGG + chr2_3:61653213-61653232 Msa0304350:intron 45.0%
CAGAAGATCTCGGACGATAA+AGG + chr2_3:61653242-61653261 Msa0304350:CDS 45.0%
TGCTCCTCCTTCATGTAATG+AGG + chr2_3:61653272-61653291 Msa0304350:CDS 45.0%
GCCCGAAAAATGAGAAGGAA+AGG - chr2_3:61653310-61653329 None:intergenic 45.0%
! TCTTTCTAGTCTGACGTGTC+CGG + chr2_3:61653620-61653639 Msa0304350:intron 45.0%
! TAGAATCTTGATGACCTCCC+CGG - chr2_3:61653642-61653661 None:intergenic 45.0%
GTGTTTGTGACAGATCCAGT+TGG + chr2_3:61653754-61653773 Msa0304350:intron 45.0%
GTGACAGATCCAGTTGGTTA+TGG + chr2_3:61653760-61653779 Msa0304350:intron 45.0%
AGTGCATCACCATAACCAAC+TGG - chr2_3:61653772-61653791 None:intergenic 45.0%
GCAATATTGCCGTCATTTCC+CGG + chr2_3:61653796-61653815 Msa0304350:CDS 45.0%
!!! TTGTTTTATATTATTATTTT+TGG + chr2_3:61648704-61648723 Msa0304350:intron 5.0%
!!! TGTTTTATATTATTATTTTT+GGG + chr2_3:61648705-61648724 Msa0304350:intron 5.0%
GTTGGGGACTTGGATTGCTT+TGG - chr2_3:61648377-61648396 None:intergenic 50.0%
! CAACTGGTAAGTTGGGGACT+TGG - chr2_3:61648387-61648406 None:intergenic 50.0%
TAAAAAGCTCCCGCATACGC+AGG + chr2_3:61648904-61648923 Msa0304350:intron 50.0%
! GGGAAGGGGTCTCACTATTT+TGG + chr2_3:61648931-61648950 Msa0304350:intron 50.0%
CATTGGGCACAACCCTTCTA+AGG + chr2_3:61650085-61650104 Msa0304350:intron 50.0%
!! GTGCCGCTTTCTGTGATTGA+GGG - chr2_3:61650378-61650397 None:intergenic 50.0%
CACAGAAAGCGGCACCAATT+TGG + chr2_3:61650383-61650402 Msa0304350:intron 50.0%
CGAGATCGAGGTTGTTATCG+AGG - chr2_3:61651177-61651196 None:intergenic 50.0%
CTGCTCAGAGGAGACAATCA+TGG - chr2_3:61651262-61651281 None:intergenic 50.0%
!! CCAAGGGTTTGGTGTCAACA+AGG - chr2_3:61651308-61651327 None:intergenic 50.0%
CCTTGTTGACACCAAACCCT+TGG + chr2_3:61651305-61651324 Msa0304350:intron 50.0%
! GGGTGATGAGACTAGTCCAA+GGG - chr2_3:61651324-61651343 None:intergenic 50.0%
! TGGGTGATGAGACTAGTCCA+AGG - chr2_3:61651325-61651344 None:intergenic 50.0%
! GGGTGAGTTGAACAAGTTGG+AGG - chr2_3:61651442-61651461 None:intergenic 50.0%
TACAGGGGATCGACAATGGA+GGG - chr2_3:61651489-61651508 None:intergenic 50.0%
TTACAGGGGATCGACAATGG+AGG - chr2_3:61651490-61651509 None:intergenic 50.0%
GGAAGCAGTGGTTGTTACAG+GGG - chr2_3:61651504-61651523 None:intergenic 50.0%
GGGAAGCAGTGGTTGTTACA+GGG - chr2_3:61651505-61651524 None:intergenic 50.0%
AGGGAAGCAGTGGTTGTTAC+AGG - chr2_3:61651506-61651525 None:intergenic 50.0%
ACAATTGGAGAGGGAAGCAG+TGG - chr2_3:61651516-61651535 None:intergenic 50.0%
GCCTTAGCAATCCAACCAAC+AGG + chr2_3:61651690-61651709 Msa0304350:intron 50.0%
! CCCTGTTGGTTGGATTGCTA+AGG - chr2_3:61651694-61651713 None:intergenic 50.0%
TAGCGCTGCCAGTACTTAAC+GGG - chr2_3:61651722-61651741 None:intergenic 50.0%
GTAGCGCTGCCAGTACTTAA+CGG - chr2_3:61651723-61651742 None:intergenic 50.0%
GGGAGGACATGTGAGCTAAA+AGG - chr2_3:61651746-61651765 None:intergenic 50.0%
TTTGACCTGCTGGATCTTCG+AGG - chr2_3:61651789-61651808 None:intergenic 50.0%
GGATAAGGAGGAGCTAGCTA+GGG - chr2_3:61652049-61652068 None:intergenic 50.0%
AGGATAAGGAGGAGCTAGCT+AGG - chr2_3:61652050-61652069 None:intergenic 50.0%
GAAGCCCCCATGAATCTGTT+AGG - chr2_3:61652101-61652120 None:intergenic 50.0%
! GCTGTTTCAAGGTCAGAAGG+TGG + chr2_3:61652486-61652505 Msa0304350:intron 50.0%
TCATTTGGAGGTTGGGCAGA+TGG - chr2_3:61652900-61652919 None:intergenic 50.0%
GATTTCACCTGCGTGTAGTG+AGG + chr2_3:61652937-61652956 Msa0304350:CDS 50.0%
TCAAATCCCTCACTACACGC+AGG - chr2_3:61652947-61652966 None:intergenic 50.0%
ACAGGAGCAGGAATTGAAGG+AGG - chr2_3:61652990-61653009 None:intergenic 50.0%
TGACCGCCCGAAAAATGAGA+AGG - chr2_3:61653315-61653334 None:intergenic 50.0%
! CTTTCTAGTCTGACGTGTCC+GGG + chr2_3:61653621-61653640 Msa0304350:intron 50.0%
! TTTCTAGTCTGACGTGTCCG+GGG + chr2_3:61653622-61653641 Msa0304350:intron 50.0%
! AAGAGAGGATGGCGGTTAGT+TGG + chr2_3:61653661-61653680 Msa0304350:intron 50.0%
GCGTGTCTAGTGACCAACAC+GGG - chr2_3:61648803-61648822 None:intergenic 55.0%
GGCGTGTCTAGTGACCAACA+CGG - chr2_3:61648804-61648823 None:intergenic 55.0%
GCAAGAGGGATGTAAGGCCA+GGG - chr2_3:61650049-61650068 None:intergenic 55.0%
AGCAAGAGGGATGTAAGGCC+AGG - chr2_3:61650050-61650069 None:intergenic 55.0%
!! GGTGCCGCTTTCTGTGATTG+AGG - chr2_3:61650379-61650398 None:intergenic 55.0%
GCATTGGGCGTTCATGAGCA+CGG - chr2_3:61651625-61651644 None:intergenic 55.0%
CTGCCAGTACTTAACGGGAC+AGG - chr2_3:61651717-61651736 None:intergenic 55.0%
AGAGTCAGCAATGCCGGAGT+GGG - chr2_3:61651766-61651785 None:intergenic 55.0%
TCGAGGAGAGTCAGCAATGC+CGG - chr2_3:61651772-61651791 None:intergenic 55.0%
ACTCTCCTCGAAGATCCAGC+AGG + chr2_3:61651781-61651800 Msa0304350:intron 55.0%
CTGAAGATGCCAACCTGCTC+TGG - chr2_3:61653225-61653244 None:intergenic 55.0%
! CGTGTCGATGTCACCCGTGT+TGG + chr2_3:61648787-61648806 Msa0304350:intron 60.0%
TTCCCGGAACCTGCGTATGC+GGG - chr2_3:61648916-61648935 None:intergenic 60.0%
CTTCCCGGAACCTGCGTATG+CGG - chr2_3:61648917-61648936 None:intergenic 60.0%
GCATACGCAGGTTCCGGGAA+GGG + chr2_3:61648916-61648935 Msa0304350:intron 60.0%
CATACGCAGGTTCCGGGAAG+GGG + chr2_3:61648917-61648936 Msa0304350:intron 60.0%
CTTAACGGGACAGGCCCTGT+TGG - chr2_3:61651708-61651727 None:intergenic 60.0%
GGGCCTGTCCCGTTAAGTAC+TGG + chr2_3:61651711-61651730 Msa0304350:intron 60.0%
GCTCACATGTCCTCCCACTC+CGG + chr2_3:61651750-61651769 Msa0304350:intron 60.0%
GAGAGTCAGCAATGCCGGAG+TGG - chr2_3:61651767-61651786 None:intergenic 60.0%
! TGGTGGGCAGCTACCAGTTG+AGG + chr2_3:61653485-61653504 Msa0304350:CDS 60.0%
GCTCCCGCATACGCAGGTTC+CGG + chr2_3:61648910-61648929 Msa0304350:intron 65.0%
CTCCCGCATACGCAGGTTCC+GGG + chr2_3:61648911-61648930 Msa0304350:intron 65.0%
CGCATACGCAGGTTCCGGGA+AGG + chr2_3:61648915-61648934 Msa0304350:intron 65.0%
ACGGGACAGGCCCTGTTGGT+TGG - chr2_3:61651704-61651723 None:intergenic 65.0%
GTCAGCAATGCCGGAGTGGG+AGG - chr2_3:61651763-61651782 None:intergenic 65.0%
CTAGTCTGACGTGTCCGGGG+AGG + chr2_3:61653625-61653644 Msa0304350:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 61648336 61654030 61648336 ID=Msa0304350;Name=Msa0304350
chr2_3 mRNA 61648336 61654030 61648336 ID=Msa0304350-mRNA-1;Parent=Msa0304350;Name=Msa0304350-mRNA-1;_AED=0.12;_eAED=0.12;_QI=187|1|1|1|0.75|0.88|9|190|277
chr2_3 exon 61648336 61648538 61648336 ID=Msa0304350-mRNA-1:exon:20423;Parent=Msa0304350-mRNA-1
chr2_3 exon 61649533 61649721 61649533 ID=Msa0304350-mRNA-1:exon:20424;Parent=Msa0304350-mRNA-1
chr2_3 exon 61652487 61652566 61652487 ID=Msa0304350-mRNA-1:exon:20425;Parent=Msa0304350-mRNA-1
chr2_3 exon 61652736 61652795 61652736 ID=Msa0304350-mRNA-1:exon:20426;Parent=Msa0304350-mRNA-1
chr2_3 exon 61652930 61653166 61652930 ID=Msa0304350-mRNA-1:exon:20427;Parent=Msa0304350-mRNA-1
chr2_3 exon 61653231 61653293 61653231 ID=Msa0304350-mRNA-1:exon:20428;Parent=Msa0304350-mRNA-1
chr2_3 exon 61653438 61653506 61653438 ID=Msa0304350-mRNA-1:exon:20429;Parent=Msa0304350-mRNA-1
chr2_3 exon 61653629 61653674 61653629 ID=Msa0304350-mRNA-1:exon:20430;Parent=Msa0304350-mRNA-1
chr2_3 exon 61653767 61654030 61653767 ID=Msa0304350-mRNA-1:exon:20431;Parent=Msa0304350-mRNA-1
chr2_3 five_prime_UTR 61648336 61648522 61648336 ID=Msa0304350-mRNA-1:five_prime_utr;Parent=Msa0304350-mRNA-1
chr2_3 CDS 61648523 61648538 61648523 ID=Msa0304350-mRNA-1:cds;Parent=Msa0304350-mRNA-1
chr2_3 CDS 61649533 61649721 61649533 ID=Msa0304350-mRNA-1:cds;Parent=Msa0304350-mRNA-1
chr2_3 CDS 61652487 61652566 61652487 ID=Msa0304350-mRNA-1:cds;Parent=Msa0304350-mRNA-1
chr2_3 CDS 61652736 61652795 61652736 ID=Msa0304350-mRNA-1:cds;Parent=Msa0304350-mRNA-1
chr2_3 CDS 61652930 61653166 61652930 ID=Msa0304350-mRNA-1:cds;Parent=Msa0304350-mRNA-1
chr2_3 CDS 61653231 61653293 61653231 ID=Msa0304350-mRNA-1:cds;Parent=Msa0304350-mRNA-1
chr2_3 CDS 61653438 61653506 61653438 ID=Msa0304350-mRNA-1:cds;Parent=Msa0304350-mRNA-1
chr2_3 CDS 61653629 61653674 61653629 ID=Msa0304350-mRNA-1:cds;Parent=Msa0304350-mRNA-1
chr2_3 CDS 61653767 61653840 61653767 ID=Msa0304350-mRNA-1:cds;Parent=Msa0304350-mRNA-1
chr2_3 three_prime_UTR 61653841 61654030 61653841 ID=Msa0304350-mRNA-1:three_prime_utr;Parent=Msa0304350-mRNA-1
Gene Sequence

>Msa0304350

ATGGCTTCATCTCACTGTAGCTTAGGGACACAAAATGTCAAAGTATTGAACTTGCACTTTGGTCAAGAAAGAGTTGAGCTTTCACAACATTTTGGTACTAGAAGTTGGATCAGTAGGAAGTCACTGCAGTACACTAGATTGGTTGCGTCAAGACAGACAGTTAGATCTTTAACCCCATCTAATGACCAATCAGCAGAGATCCAATCTGTTTCAAGGTCAGAAGGTGGTTCTGAAGAGATTAAATCTTCTGGTTTGACAAGTGAACTGTTTCCCAATTTTAATGATGTGGAATTCTTGGTCACTAACTTATGTGAGACGGCATCAATTGGAGAGCTAGAATTAAAACTTGATGGATTTCACCTGCGTGTAGTGAGGGATTTGACTGAAAAATCTAAAACACTTCCTCCTTCAATTCCTGCTCCTGTAAGTATAAATACACCCGCAGAAGCACCTAAACCAAATGGATCAGTTTCTACATTGACAACATTGGCCATCTCGAAACCAGTACCTTCTTCATTGTCTATCGAGGGATTCCTAGAAAAAGCTGCAGATGAAGGGTTGGTGATAATTCATTCTCCAACGGTTGGCATCTTCAGAAGATCTCGGACGATAAAGGGAAAACGTGCTCCTCCTTCATGTAATGAGATGCAAAAAGTTGAGGACGGGAAAGTGATTTGTTACATTGAACAGCTTGGTGGGCAGCTACCAGTTGAGTCTGACGTGTCCGGGGAGGTCATCAAGATTCTAAGAGAGGATGGCGATCCAGTTGGTTATGGTGATGCACTTATAGCAATATTGCCGTCATTTCCCGGAATAAAGAAGCTTCAATATTGA

Protein sequence

>Msa0304350

MASSHCSLGTQNVKVLNLHFGQERVELSQHFGTRSWISRKSLQYTRLVASRQTVRSLTPSNDQSAEIQSVSRSEGGSEEIKSSGLTSELFPNFNDVEFLVTNLCETASIGELELKLDGFHLRVVRDLTEKSKTLPPSIPAPVSINTPAEAPKPNGSVSTLTTLAISKPVPSSLSIEGFLEKAADEGLVIIHSPTVGIFRRSRTIKGKRAPPSCNEMQKVEDGKVICYIEQLGGQLPVESDVSGEVIKILREDGDPVGYGDALIAILPSFPGIKKLQY*