Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06681.t1 | XP_013461434.1 | 97.9 | 240 | 3 | 1 | 1 | 238 | 1 | 240 | 1.70E-82 | 315.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06681.t1 | P81760 | 69.9 | 239 | 68 | 3 | 1 | 238 | 1 | 236 | 4.3e-39 | 162.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06681.t1 | B7FHD5 | 97.9 | 240 | 3 | 1 | 1 | 238 | 1 | 240 | 1.2e-82 | 315.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene06681 | 0.827341 | 1.65E-54 | -1.69E-46 |
| MS.gene049173 | MS.gene06681 | 0.809302 | 2.02E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene06681 | 0.823712 | 1.19E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene06681 | 0.818798 | 1.62E-52 | -1.69E-46 |
| MS.gene049285 | MS.gene06681 | 0.823699 | 1.20E-53 | -1.69E-46 |
| MS.gene049320 | MS.gene06681 | 0.816963 | 4.22E-52 | -1.69E-46 |
| MS.gene049351 | MS.gene06681 | 0.84375 | 1.16E-58 | -1.69E-46 |
| MS.gene049369 | MS.gene06681 | 0.823069 | 1.69E-53 | -1.69E-46 |
| MS.gene049427 | MS.gene06681 | 0.873886 | 1.04E-67 | -1.69E-46 |
| MS.gene049491 | MS.gene06681 | 0.833056 | 6.64E-56 | -1.69E-46 |
| MS.gene049609 | MS.gene06681 | 0.831454 | 1.65E-55 | -1.69E-46 |
| MS.gene049614 | MS.gene06681 | 0.859389 | 4.28E-63 | -1.69E-46 |
| MS.gene049661 | MS.gene06681 | 0.864478 | 1.18E-64 | -1.69E-46 |
| MS.gene049662 | MS.gene06681 | 0.854093 | 1.55E-61 | -1.69E-46 |
| MS.gene049758 | MS.gene06681 | 0.808144 | 3.58E-50 | -1.69E-46 |
| MS.gene049760 | MS.gene06681 | 0.854766 | 9.89E-62 | -1.69E-46 |
| MS.gene049805 | MS.gene06681 | 0.883254 | 5.24E-71 | -1.69E-46 |
| MS.gene050076 | MS.gene06681 | 0.873935 | 1.00E-67 | -1.69E-46 |
| MS.gene050163 | MS.gene06681 | 0.844198 | 8.77E-59 | -1.69E-46 |
| MS.gene050165 | MS.gene06681 | 0.816895 | 4.37E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene06681 | 0.849814 | 2.54E-60 | -1.69E-46 |
| MS.gene050333 | MS.gene06681 | 0.813632 | 2.32E-51 | -1.69E-46 |
| MS.gene050397 | MS.gene06681 | 0.810338 | 1.21E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene06681 | 0.889808 | 1.74E-73 | -1.69E-46 |
| MS.gene050529 | MS.gene06681 | 0.803365 | 3.61E-49 | -1.69E-46 |
| MS.gene05053 | MS.gene06681 | 0.802238 | 6.17E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene06681 | 0.831494 | 1.62E-55 | -1.69E-46 |
| MS.gene050670 | MS.gene06681 | 0.82106 | 4.93E-53 | -1.69E-46 |
| MS.gene050686 | MS.gene06681 | 0.801244 | 9.86E-49 | -1.69E-46 |
| MS.gene050747 | MS.gene06681 | 0.806272 | 8.92E-50 | -1.69E-46 |
| MS.gene050767 | MS.gene06681 | 0.918161 | 2.19E-86 | -1.69E-46 |
| MS.gene050770 | MS.gene06681 | 0.919873 | 2.61E-87 | -1.69E-46 |
| MS.gene050772 | MS.gene06681 | 0.849961 | 2.31E-60 | -1.69E-46 |
| MS.gene050783 | MS.gene06681 | 0.824212 | 9.12E-54 | -1.69E-46 |
| MS.gene050812 | MS.gene06681 | 0.80597 | 1.03E-49 | -1.69E-46 |
| MS.gene05100 | MS.gene06681 | 0.831866 | 1.31E-55 | -1.69E-46 |
| MS.gene05101 | MS.gene06681 | 0.886892 | 2.30E-72 | -1.69E-46 |
| MS.gene05105 | MS.gene06681 | 0.847647 | 1.01E-59 | -1.69E-46 |
| MS.gene051228 | MS.gene06681 | 0.867293 | 1.52E-65 | -1.69E-46 |
| MS.gene051387 | MS.gene06681 | 0.819969 | 8.78E-53 | -1.69E-46 |
| MS.gene051471 | MS.gene06681 | 0.851828 | 6.88E-61 | -1.69E-46 |
| MS.gene051582 | MS.gene06681 | 0.809596 | 1.75E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene06681 | 0.877531 | 5.83E-69 | -1.69E-46 |
| MS.gene051692 | MS.gene06681 | 0.868355 | 6.95E-66 | -1.69E-46 |
| MS.gene051694 | MS.gene06681 | 0.817011 | 4.11E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene06681 | 0.832294 | 1.03E-55 | -1.69E-46 |
| MS.gene051858 | MS.gene06681 | 0.831894 | 1.29E-55 | -1.69E-46 |
| MS.gene051877 | MS.gene06681 | 0.828914 | 6.90E-55 | -1.69E-46 |
| MS.gene052078 | MS.gene06681 | 0.882003 | 1.50E-70 | -1.69E-46 |
| MS.gene052188 | MS.gene06681 | 0.817524 | 3.15E-52 | -1.69E-46 |
| MS.gene052271 | MS.gene06681 | 0.875831 | 2.26E-68 | -1.69E-46 |
| MS.gene052287 | MS.gene06681 | 0.800609 | 1.33E-48 | -1.69E-46 |
| MS.gene052290 | MS.gene06681 | 0.884583 | 1.69E-71 | -1.69E-46 |
| MS.gene052293 | MS.gene06681 | 0.821064 | 4.93E-53 | -1.69E-46 |
| MS.gene052310 | MS.gene06681 | 0.866788 | 2.21E-65 | -1.69E-46 |
| MS.gene052322 | MS.gene06681 | 0.855398 | 6.48E-62 | -1.69E-46 |
| MS.gene052326 | MS.gene06681 | 0.864687 | 1.02E-64 | -1.69E-46 |
| MS.gene052340 | MS.gene06681 | 0.807375 | 5.21E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene06681 | 0.870127 | 1.85E-66 | -1.69E-46 |
| MS.gene052421 | MS.gene06681 | 0.853602 | 2.14E-61 | -1.69E-46 |
| MS.gene052481 | MS.gene06681 | 0.838159 | 3.39E-57 | -1.69E-46 |
| MS.gene052484 | MS.gene06681 | 0.851293 | 9.75E-61 | -1.69E-46 |
| MS.gene052485 | MS.gene06681 | 0.842097 | 3.18E-58 | -1.69E-46 |
| MS.gene052508 | MS.gene06681 | 0.801161 | 1.03E-48 | -1.69E-46 |
| MS.gene052510 | MS.gene06681 | 0.80061 | 1.33E-48 | -1.69E-46 |
| MS.gene052615 | MS.gene06681 | 0.82485 | 6.45E-54 | -1.69E-46 |
| MS.gene053009 | MS.gene06681 | 0.870515 | 1.38E-66 | -1.69E-46 |
| MS.gene053103 | MS.gene06681 | 0.87712 | 8.11E-69 | -1.69E-46 |
| MS.gene053104 | MS.gene06681 | 0.860924 | 1.47E-63 | -1.69E-46 |
| MS.gene053107 | MS.gene06681 | 0.811231 | 7.76E-51 | -1.69E-46 |
| MS.gene053207 | MS.gene06681 | 0.85401 | 1.64E-61 | -1.69E-46 |
| MS.gene053209 | MS.gene06681 | 0.864588 | 1.09E-64 | -1.69E-46 |
| MS.gene053213 | MS.gene06681 | 0.849736 | 2.67E-60 | -1.69E-46 |
| MS.gene053286 | MS.gene06681 | 0.834135 | 3.57E-56 | -1.69E-46 |
| MS.gene053322 | MS.gene06681 | 0.913977 | 3.29E-84 | -1.69E-46 |
| MS.gene053384 | MS.gene06681 | 0.800415 | 1.46E-48 | -1.69E-46 |
| MS.gene053449 | MS.gene06681 | 0.811712 | 6.10E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene06681 | 0.850136 | 2.06E-60 | -1.69E-46 |
| MS.gene053813 | MS.gene06681 | 0.843454 | 1.39E-58 | -1.69E-46 |
| MS.gene053916 | MS.gene06681 | 0.825467 | 4.61E-54 | -1.69E-46 |
| MS.gene054123 | MS.gene06681 | 0.844546 | 7.07E-59 | -1.69E-46 |
| MS.gene054376 | MS.gene06681 | 0.908458 | 1.67E-81 | -1.69E-46 |
| MS.gene054408 | MS.gene06681 | 0.800929 | 1.14E-48 | -1.69E-46 |
| MS.gene05455 | MS.gene06681 | 0.816386 | 5.68E-52 | -1.69E-46 |
| MS.gene054600 | MS.gene06681 | 0.825319 | 5.00E-54 | -1.69E-46 |
| MS.gene054642 | MS.gene06681 | 0.846784 | 1.75E-59 | -1.69E-46 |
| MS.gene054802 | MS.gene06681 | 0.89509 | 1.33E-75 | -1.69E-46 |
| MS.gene054803 | MS.gene06681 | 0.894487 | 2.36E-75 | -1.69E-46 |
| MS.gene054804 | MS.gene06681 | 0.898018 | 8.00E-77 | -1.69E-46 |
| MS.gene054955 | MS.gene06681 | 0.802705 | 4.94E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene06681 | 0.857673 | 1.39E-62 | -1.69E-46 |
| MS.gene055116 | MS.gene06681 | 0.828197 | 1.03E-54 | -1.69E-46 |
| MS.gene055206 | MS.gene06681 | 0.821423 | 4.07E-53 | -1.69E-46 |
| MS.gene055212 | MS.gene06681 | 0.804414 | 2.19E-49 | -1.69E-46 |
| MS.gene055254 | MS.gene06681 | 0.889113 | 3.24E-73 | -1.69E-46 |
| MS.gene055277 | MS.gene06681 | 0.862084 | 6.51E-64 | -1.69E-46 |
| MS.gene055289 | MS.gene06681 | 0.816409 | 5.61E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene06681 | 0.813274 | 2.78E-51 | -1.69E-46 |
| MS.gene055390 | MS.gene06681 | 0.834671 | 2.62E-56 | -1.69E-46 |
| MS.gene055397 | MS.gene06681 | 0.894331 | 2.73E-75 | -1.69E-46 |
| MS.gene055412 | MS.gene06681 | 0.855859 | 4.75E-62 | -1.69E-46 |
| MS.gene055422 | MS.gene06681 | 0.830719 | 2.51E-55 | -1.69E-46 |
| MS.gene055428 | MS.gene06681 | 0.829038 | 6.44E-55 | -1.69E-46 |
| MS.gene055499 | MS.gene06681 | 0.908357 | 1.87E-81 | -1.69E-46 |
| MS.gene055502 | MS.gene06681 | 0.803572 | 3.27E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene06681 | 0.812416 | 4.29E-51 | -1.69E-46 |
| MS.gene055636 | MS.gene06681 | 0.829192 | 5.91E-55 | -1.69E-46 |
| MS.gene055638 | MS.gene06681 | 0.813683 | 2.26E-51 | -1.69E-46 |
| MS.gene055647 | MS.gene06681 | 0.86488 | 8.84E-65 | -1.69E-46 |
| MS.gene055722 | MS.gene06681 | 0.855849 | 4.79E-62 | -1.69E-46 |
| MS.gene055896 | MS.gene06681 | 0.833315 | 5.72E-56 | -1.69E-46 |
| MS.gene05592 | MS.gene06681 | 0.895703 | 7.45E-76 | -1.69E-46 |
| MS.gene055941 | MS.gene06681 | 0.820222 | 7.69E-53 | -1.69E-46 |
| MS.gene055956 | MS.gene06681 | -0.80554 | 1.27E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene06681 | 0.824965 | 6.06E-54 | -1.69E-46 |
| MS.gene056191 | MS.gene06681 | 0.830582 | 2.71E-55 | -1.69E-46 |
| MS.gene056374 | MS.gene06681 | 0.868315 | 7.15E-66 | -1.69E-46 |
| MS.gene056407 | MS.gene06681 | 0.833078 | 6.56E-56 | -1.69E-46 |
| MS.gene056410 | MS.gene06681 | 0.84383 | 1.10E-58 | -1.69E-46 |
| MS.gene056511 | MS.gene06681 | 0.807992 | 3.85E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene06681 | 0.867394 | 1.41E-65 | -1.69E-46 |
| MS.gene056612 | MS.gene06681 | 0.800937 | 1.14E-48 | -1.69E-46 |
| MS.gene056657 | MS.gene06681 | 0.815184 | 1.05E-51 | -1.69E-46 |
| MS.gene056796 | MS.gene06681 | 0.811665 | 6.25E-51 | -1.69E-46 |
| MS.gene056897 | MS.gene06681 | 0.858873 | 6.11E-63 | -1.69E-46 |
| MS.gene057011 | MS.gene06681 | 0.874315 | 7.43E-68 | -1.69E-46 |
| MS.gene05702 | MS.gene06681 | 0.819404 | 1.18E-52 | -1.69E-46 |
| MS.gene057123 | MS.gene06681 | 0.861228 | 1.19E-63 | -1.69E-46 |
| MS.gene057124 | MS.gene06681 | 0.826707 | 2.34E-54 | -1.69E-46 |
| MS.gene057129 | MS.gene06681 | 0.967497 | 2.33E-127 | -1.69E-46 |
| MS.gene057146 | MS.gene06681 | 0.860182 | 2.47E-63 | -1.69E-46 |
| MS.gene057285 | MS.gene06681 | 0.827303 | 1.69E-54 | -1.69E-46 |
| MS.gene057295 | MS.gene06681 | 0.891913 | 2.57E-74 | -1.69E-46 |
| MS.gene057331 | MS.gene06681 | 0.845316 | 4.38E-59 | -1.69E-46 |
| MS.gene05733 | MS.gene06681 | 0.826214 | 3.07E-54 | -1.69E-46 |
| MS.gene05735 | MS.gene06681 | 0.844076 | 9.46E-59 | -1.69E-46 |
| MS.gene057416 | MS.gene06681 | 0.881152 | 3.04E-70 | -1.69E-46 |
| MS.gene057926 | MS.gene06681 | 0.825648 | 4.18E-54 | -1.69E-46 |
| MS.gene058002 | MS.gene06681 | 0.806795 | 6.92E-50 | -1.69E-46 |
| MS.gene058006 | MS.gene06681 | 0.869242 | 3.59E-66 | -1.69E-46 |
| MS.gene058019 | MS.gene06681 | 0.852647 | 4.03E-61 | -1.69E-46 |
| MS.gene058082 | MS.gene06681 | 0.822039 | 2.93E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene06681 | 0.801056 | 1.08E-48 | -1.69E-46 |
| MS.gene058233 | MS.gene06681 | 0.833569 | 4.95E-56 | -1.69E-46 |
| MS.gene058293 | MS.gene06681 | 0.920554 | 1.10E-87 | -1.69E-46 |
| MS.gene058323 | MS.gene06681 | 0.867927 | 9.54E-66 | -1.69E-46 |
| MS.gene058365 | MS.gene06681 | 0.815789 | 7.72E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene06681 | 0.834904 | 2.29E-56 | -1.69E-46 |
| MS.gene058660 | MS.gene06681 | 0.896666 | 2.96E-76 | -1.69E-46 |
| MS.gene058723 | MS.gene06681 | 0.819527 | 1.11E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene06681 | 0.803019 | 4.26E-49 | -1.69E-46 |
| MS.gene058787 | MS.gene06681 | 0.854988 | 8.53E-62 | -1.69E-46 |
| MS.gene058928 | MS.gene06681 | 0.812081 | 5.07E-51 | -1.69E-46 |
| MS.gene058993 | MS.gene06681 | 0.829993 | 3.77E-55 | -1.69E-46 |
| MS.gene059029 | MS.gene06681 | 0.836571 | 8.65E-57 | -1.69E-46 |
| MS.gene05907 | MS.gene06681 | 0.821849 | 3.24E-53 | -1.69E-46 |
| MS.gene059326 | MS.gene06681 | 0.853253 | 2.70E-61 | -1.69E-46 |
| MS.gene05934 | MS.gene06681 | 0.820198 | 7.78E-53 | -1.69E-46 |
| MS.gene059536 | MS.gene06681 | 0.878947 | 1.86E-69 | -1.69E-46 |
| MS.gene059597 | MS.gene06681 | 0.845421 | 4.10E-59 | -1.69E-46 |
| MS.gene05959 | MS.gene06681 | 0.81981 | 9.55E-53 | -1.69E-46 |
| MS.gene059676 | MS.gene06681 | 0.856289 | 3.56E-62 | -1.69E-46 |
| MS.gene059677 | MS.gene06681 | 0.815687 | 8.14E-52 | -1.69E-46 |
| MS.gene059688 | MS.gene06681 | 0.883417 | 4.57E-71 | -1.69E-46 |
| MS.gene059692 | MS.gene06681 | 0.887741 | 1.09E-72 | -1.69E-46 |
| MS.gene059695 | MS.gene06681 | 0.889266 | 2.82E-73 | -1.69E-46 |
| MS.gene059708 | MS.gene06681 | 0.81243 | 4.26E-51 | -1.69E-46 |
| MS.gene059711 | MS.gene06681 | 0.811401 | 7.13E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene06681 | 0.822689 | 2.07E-53 | -1.69E-46 |
| MS.gene059858 | MS.gene06681 | 0.810296 | 1.24E-50 | -1.69E-46 |
| MS.gene059894 | MS.gene06681 | 0.833001 | 6.85E-56 | -1.69E-46 |
| MS.gene059902 | MS.gene06681 | 0.83254 | 8.92E-56 | -1.69E-46 |
| MS.gene059960 | MS.gene06681 | 0.914314 | 2.22E-84 | -1.69E-46 |
| MS.gene059974 | MS.gene06681 | 0.802988 | 4.32E-49 | -1.69E-46 |
| MS.gene060193 | MS.gene06681 | 0.837068 | 6.46E-57 | -1.69E-46 |
| MS.gene060356 | MS.gene06681 | 0.809799 | 1.58E-50 | -1.69E-46 |
| MS.gene06037 | MS.gene06681 | 0.829841 | 4.11E-55 | -1.69E-46 |
| MS.gene060403 | MS.gene06681 | 0.841365 | 4.97E-58 | -1.69E-46 |
| MS.gene060727 | MS.gene06681 | 0.802481 | 5.50E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene06681 | 0.870673 | 1.22E-66 | -1.69E-46 |
| MS.gene060818 | MS.gene06681 | 0.869864 | 2.25E-66 | -1.69E-46 |
| MS.gene060837 | MS.gene06681 | 0.82171 | 3.49E-53 | -1.69E-46 |
| MS.gene06092 | MS.gene06681 | 0.838488 | 2.79E-57 | -1.69E-46 |
| MS.gene061041 | MS.gene06681 | 0.842181 | 3.02E-58 | -1.69E-46 |
| MS.gene061049 | MS.gene06681 | 0.837698 | 4.46E-57 | -1.69E-46 |
| MS.gene061051 | MS.gene06681 | -0.850403 | 1.74E-60 | -1.69E-46 |
| MS.gene061150 | MS.gene06681 | 0.835268 | 1.85E-56 | -1.69E-46 |
| MS.gene061200 | MS.gene06681 | 0.919005 | 7.72E-87 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06681.t1 | MTR_3g491890 | 97.917 | 240 | 3 | 1 | 1 | 238 | 1 | 240 | 1.34e-172 | 474 |
| MS.gene06681.t1 | MTR_5g012110 | 31.250 | 128 | 81 | 2 | 115 | 237 | 97 | 222 | 6.01e-12 | 63.9 |
| MS.gene06681.t1 | MTR_5g012110 | 31.250 | 128 | 81 | 2 | 115 | 237 | 67 | 192 | 8.13e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06681.t1 | AT5G53490 | 65.145 | 241 | 75 | 3 | 1 | 238 | 1 | 235 | 7.48e-105 | 303 |
| MS.gene06681.t1 | AT5G53490 | 64.876 | 242 | 75 | 4 | 1 | 238 | 1 | 236 | 5.11e-103 | 298 |
| MS.gene06681.t1 | AT5G53490 | 64.876 | 242 | 75 | 4 | 1 | 238 | 24 | 259 | 5.31e-103 | 299 |
| MS.gene06681.t1 | AT5G53490 | 62.151 | 251 | 81 | 4 | 1 | 238 | 1 | 250 | 4.66e-101 | 294 |
| MS.gene06681.t1 | AT1G12250 | 30.723 | 166 | 106 | 4 | 77 | 237 | 5 | 166 | 2.03e-14 | 70.1 |
| MS.gene06681.t1 | AT1G12250 | 31.210 | 157 | 100 | 3 | 86 | 237 | 87 | 240 | 4.07e-14 | 70.5 |
| MS.gene06681.t1 | AT1G12250 | 33.333 | 105 | 65 | 1 | 138 | 237 | 1 | 105 | 2.70e-12 | 62.8 |
Find 59 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTTGTGAAGTCACATTTC+CGG | 0.250911 | 3.3:+76570998 | None:intergenic |
| CAGACAGAGTCTTCCCCTTC+AGG | 0.276167 | 3.3:+76570965 | None:intergenic |
| TTGTATTTCTGCATATCTTT+TGG | 0.289675 | 3.3:+76570027 | None:intergenic |
| TGTTGGATCGTGTTAATTTC+GGG | 0.294360 | 3.3:-76570166 | MS.gene06681:CDS |
| GTGTTGGATCGTGTTAATTT+CGG | 0.299450 | 3.3:-76570167 | MS.gene06681:CDS |
| CACCTTTGACGATGCTAAAC+TGG | 0.319451 | 3.3:-76570093 | MS.gene06681:CDS |
| TTTCGGGAAAGCAGATCTTC+AGG | 0.327829 | 3.3:-76570150 | MS.gene06681:CDS |
| ATCTTCAGGGAGCTGTATTT+AGG | 0.328541 | 3.3:-76570136 | MS.gene06681:CDS |
| GAAGGCGAAGCTGAGTTAGA+TGG | 0.362215 | 3.3:-76573018 | MS.gene06681:intron |
| CGCTGCGAACGTGCATTTGT+TGG | 0.372475 | 3.3:-76571069 | MS.gene06681:CDS |
| GCATTTGTTGGCAACACAAT+TGG | 0.392635 | 3.3:-76571057 | MS.gene06681:CDS |
| CCCTTCACAATCACTTGCTC+TGG | 0.411094 | 3.3:-76573145 | MS.gene06681:intron |
| TCCCGTTACTGCTGCTACTC+AGG | 0.417361 | 3.3:-76572902 | MS.gene06681:intron |
| TGTCAAAGGCTTATGCAGTT+GGG | 0.417381 | 3.3:-76570888 | MS.gene06681:CDS |
| AAATGCACGTTCGCAGCGAT+TGG | 0.439609 | 3.3:+76571074 | None:intergenic |
| TGTTGGCAACACAATTGGTC+AGG | 0.445456 | 3.3:-76571052 | MS.gene06681:CDS |
| CATGTCAGCACCGTCAAACT+TGG | 0.449162 | 3.3:+76570924 | None:intergenic |
| ACCTGAGTAGCAGCAGTAAC+GGG | 0.463670 | 3.3:+76572901 | None:intergenic |
| AACACAATTGGTCAGGCAAA+TGG | 0.475300 | 3.3:-76571045 | MS.gene06681:CDS |
| AGCTCGACCCTCGTCGCCGA+TGG | 0.476213 | 3.3:+76570004 | None:intergenic |
| GATTGGGCTCAGTTGACAAT+GGG | 0.478708 | 3.3:+76571091 | None:intergenic |
| CGGGAGTTGAATTGAAAGGT+TGG | 0.482334 | 3.3:+76573231 | None:intergenic |
| ACTTAGTCTCAACAAAATCA+AGG | 0.488052 | 3.3:-76572974 | MS.gene06681:CDS |
| TTCGGGAAAGCAGATCTTCA+GGG | 0.490270 | 3.3:-76570149 | MS.gene06681:CDS |
| TTTGGTTGAGTAGTTGCGTA+TGG | 0.490995 | 3.3:+76573195 | None:intergenic |
| ATGTCAGATGCCAAGTTTGA+CGG | 0.493715 | 3.3:-76570934 | MS.gene06681:CDS |
| AATGCACGTTCGCAGCGATT+GGG | 0.510575 | 3.3:+76571075 | None:intergenic |
| CAGAGTCTTCCCCTTCAGGT+TGG | 0.517528 | 3.3:+76570969 | None:intergenic |
| ATGTCAAAGGCTTATGCAGT+TGG | 0.517874 | 3.3:-76570889 | MS.gene06681:CDS |
| GTAGTTGCGTATGGACAAAC+TGG | 0.517957 | 3.3:+76573204 | None:intergenic |
| AGTGGTGAAACATGGTCGTT+TGG | 0.528721 | 3.3:+76573177 | None:intergenic |
| GTCAAAGGCTTATGCAGTTG+GGG | 0.538436 | 3.3:-76570887 | MS.gene06681:CDS |
| AACCTGAGTAGCAGCAGTAA+CGG | 0.539008 | 3.3:+76572900 | None:intergenic |
| TTCGCGGGAGTTGAATTGAA+AGG | 0.550681 | 3.3:+76573227 | None:intergenic |
| ACGACAAAGCATTAGATCTC+CGG | 0.559241 | 3.3:-76571017 | MS.gene06681:CDS |
| CAGTTTAGCATCGTCAAAGG+TGG | 0.560849 | 3.3:+76570094 | None:intergenic |
| GACAGAAGTTGTAATGTCAA+AGG | 0.563514 | 3.3:-76570902 | MS.gene06681:CDS |
| CGATTGGGCTCAGTTGACAA+TGG | 0.568426 | 3.3:+76571090 | None:intergenic |
| GGACTTCTCAAATGCAGTGT+TGG | 0.574276 | 3.3:-76570183 | MS.gene06681:CDS |
| TTCCAGTTTAGCATCGTCAA+AGG | 0.578875 | 3.3:+76570091 | None:intergenic |
| TTGTTGAGACTAAGTAACCT+TGG | 0.583587 | 3.3:+76572982 | None:intergenic |
| ATAAGCTGCAAGAATACCAC+AGG | 0.587978 | 3.3:+76572945 | None:intergenic |
| TGTGAAGGGTGAAGCAGAAG+TGG | 0.591249 | 3.3:+76573159 | None:intergenic |
| CGTATGGACAAACTGGTTCG+CGG | 0.591395 | 3.3:+76573211 | None:intergenic |
| GACGAGGGTCGAGCTGAGCT+AGG | 0.596639 | 3.3:-76569996 | MS.gene06681:CDS |
| CTTAGTCTCAACAAAATCAA+GGG | 0.599258 | 3.3:-76572973 | MS.gene06681:CDS |
| ATATGCAGAAATACAACCAT+CGG | 0.602365 | 3.3:-76570020 | MS.gene06681:CDS |
| GTATGGACAAACTGGTTCGC+GGG | 0.604115 | 3.3:+76573212 | None:intergenic |
| CCAGAGCAAGTGATTGTGAA+GGG | 0.619678 | 3.3:+76573145 | None:intergenic |
| GAAGCAGAAGTGGTGAAACA+TGG | 0.620884 | 3.3:+76573169 | None:intergenic |
| AATACAACCATCGGCGACGA+GGG | 0.628415 | 3.3:-76570011 | MS.gene06681:CDS |
| AAATACAACCATCGGCGACG+AGG | 0.630860 | 3.3:-76570012 | MS.gene06681:CDS |
| AAAATCAAGGGTGTTGCCTG+TGG | 0.646472 | 3.3:-76572961 | MS.gene06681:CDS |
| TTTGACGATGCTAAACTGGA+AGG | 0.655477 | 3.3:-76570089 | MS.gene06681:CDS |
| ATTGGGCTCAGTTGACAATG+GGG | 0.660543 | 3.3:+76571092 | None:intergenic |
| TCAAAGGCTTATGCAGTTGG+GGG | 0.667718 | 3.3:-76570886 | MS.gene06681:CDS |
| ACCAGAGCAAGTGATTGTGA+AGG | 0.676454 | 3.3:+76573144 | None:intergenic |
| TTGGGCTCAGTTGACAATGG+GGG | 0.687518 | 3.3:+76571093 | None:intergenic |
| ATGGAACTGAGAATAAACCA+AGG | 0.746677 | 3.3:-76572999 | MS.gene06681:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAAAAAACACAAAAAAAT+TGG | + | chr3.3:76571860-76571879 | None:intergenic | 15.0% |
| !! | CAAATTAAAACATGTAATAT+AGG | - | chr3.3:76570910-76570929 | MS.gene06681:CDS | 15.0% |
| !! | TGAAAAAACACAAAAAAATT+GGG | + | chr3.3:76571859-76571878 | None:intergenic | 15.0% |
| !! | AAACATTTACTAAACTTGAA+TGG | - | chr3.3:76572526-76572545 | MS.gene06681:intron | 20.0% |
| !! | AATGTATAGAAACATGTATT+TGG | + | chr3.3:76572441-76572460 | None:intergenic | 20.0% |
| !! | AATGTATCTATAAATCCAAA+TGG | - | chr3.3:76570988-76571007 | MS.gene06681:CDS | 20.0% |
| !! | ACAAACAAATTTAAATGTCT+TGG | + | chr3.3:76570165-76570184 | None:intergenic | 20.0% |
| !! | TGATTCATACTAATACTATT+TGG | - | chr3.3:76572965-76572984 | MS.gene06681:CDS | 20.0% |
| !!! | ATGAAGAATAACTTTTATGT+TGG | - | chr3.3:76572503-76572522 | MS.gene06681:intron | 20.0% |
| !!! | CTCCTTTTTTTTTTTTGAAA+CGG | - | chr3.3:76571275-76571294 | MS.gene06681:intron | 20.0% |
| !!! | GCTTATTTTATCATAGAAAT+TGG | - | chr3.3:76572832-76572851 | MS.gene06681:intron | 20.0% |
| !!! | TTAGATTGGATTATTAGTTT+TGG | + | chr3.3:76571556-76571575 | None:intergenic | 20.0% |
| ! | AAAACACAAAAAAATTGGGT+TGG | + | chr3.3:76571855-76571874 | None:intergenic | 25.0% |
| ! | AACAATCGTACAAGATTATT+AGG | - | chr3.3:76570448-76570467 | MS.gene06681:intron | 25.0% |
| ! | AATCAGAGGTAATTATTATC+AGG | + | chr3.3:76572578-76572597 | None:intergenic | 25.0% |
| ! | ACTTCATCATTTCATTCAAA+TGG | - | chr3.3:76571704-76571723 | MS.gene06681:intron | 25.0% |
| ! | ATATTCAATACCAACCTAAA+TGG | + | chr3.3:76571962-76571981 | None:intergenic | 25.0% |
| ! | ATTTCATTCAAATGGTCATT+CGG | - | chr3.3:76571712-76571731 | MS.gene06681:intron | 25.0% |
| ! | CCACTAACTACTATTAATAA+GGG | - | chr3.3:76572793-76572812 | MS.gene06681:intron | 25.0% |
| ! | GGTTAGTAAGTTAATTAGAT+TGG | + | chr3.3:76571570-76571589 | None:intergenic | 25.0% |
| ! | TCAAAAAAAAAAAAGGAGCA+GGG | + | chr3.3:76571273-76571292 | None:intergenic | 25.0% |
| ! | TCCACTAACTACTATTAATA+AGG | - | chr3.3:76572792-76572811 | MS.gene06681:intron | 25.0% |
| ! | TGAAAGATGAATAAAATCAG+AGG | + | chr3.3:76572592-76572611 | None:intergenic | 25.0% |
| ! | TTCAAAAAAAAAAAAGGAGC+AGG | + | chr3.3:76571274-76571293 | None:intergenic | 25.0% |
| !! | AAGTGAGTGTTAATATTTTC+AGG | + | chr3.3:76570355-76570374 | None:intergenic | 25.0% |
| !! | ATGATAGTACTGAACTTATT+AGG | - | chr3.3:76570686-76570705 | MS.gene06681:intron | 25.0% |
| !! | TGATTTTGTACTAGTAAACA+AGG | + | chr3.3:76572376-76572395 | None:intergenic | 25.0% |
| !! | TGCCGTTTCAAAAAAAAAAA+AGG | + | chr3.3:76571280-76571299 | None:intergenic | 25.0% |
| !!! | TTGGATTATTAGTTTTGGTT+TGG | + | chr3.3:76571551-76571570 | None:intergenic | 25.0% |
| !!! | TTGTATTTCTGCATATCTTT+TGG | + | chr3.3:76573197-76573216 | None:intergenic | 25.0% |
| !!! | TTGTGTTTTTTCATTGTGAT+TGG | - | chr3.3:76571866-76571885 | MS.gene06681:intron | 25.0% |
| AAACCAAATTGAGACAACAA+GGG | + | chr3.3:76571228-76571247 | None:intergenic | 30.0% | |
| AAATATTATTCATCGACGAG+AGG | - | chr3.3:76571299-76571318 | MS.gene06681:intron | 30.0% | |
| AAATGAAAAATCCAACCTGA+AGG | - | chr3.3:76572241-76572260 | MS.gene06681:intron | 30.0% | |
| AATATTATTCATCGACGAGA+GGG | - | chr3.3:76571300-76571319 | MS.gene06681:intron | 30.0% | |
| AATGAAAAATCCAACCTGAA+GGG | - | chr3.3:76572242-76572261 | MS.gene06681:intron | 30.0% | |
| ACAAACTTGTCAAAACCATT+TGG | + | chr3.3:76571006-76571025 | None:intergenic | 30.0% | |
| ACATGTAATATAGGACCAAA+TGG | - | chr3.3:76570919-76570938 | MS.gene06681:CDS | 30.0% | |
| ACTCAATGCAATCATTAGTT+AGG | - | chr3.3:76570378-76570397 | MS.gene06681:intron | 30.0% | |
| ACTTAGTCTCAACAAAATCA+AGG | - | chr3.3:76570247-76570266 | MS.gene06681:intron | 30.0% | |
| AGAAAGACAATGAAAATCGT+AGG | + | chr3.3:76571788-76571807 | None:intergenic | 30.0% | |
| ATACATGGCATTCAACATAA+TGG | + | chr3.3:76572664-76572683 | None:intergenic | 30.0% | |
| ATATGCAGAAATACAACCAT+CGG | - | chr3.3:76573201-76573220 | MS.gene06681:CDS | 30.0% | |
| ATGTATTTGGTCATTCATGA+AGG | + | chr3.3:76572428-76572447 | None:intergenic | 30.0% | |
| CAAAACTTGTCAAAACCATT+TGG | + | chr3.3:76571075-76571094 | None:intergenic | 30.0% | |
| CCCTTATTAATAGTAGTTAG+TGG | + | chr3.3:76572796-76572815 | None:intergenic | 30.0% | |
| CTTAGTCTCAACAAAATCAA+GGG | - | chr3.3:76570248-76570267 | MS.gene06681:intron | 30.0% | |
| GACAAATGGAGTAATATACA+TGG | + | chr3.3:76572679-76572698 | None:intergenic | 30.0% | |
| GACACTTAATAAGAGACAAA+TGG | + | chr3.3:76572693-76572712 | None:intergenic | 30.0% | |
| GTCATATTTCAAAGCTTAGA+AGG | + | chr3.3:76571766-76571785 | None:intergenic | 30.0% | |
| TAAACCAAATTGAGACAACA+AGG | + | chr3.3:76571229-76571248 | None:intergenic | 30.0% | |
| TGACAGAAGTCTCATATAAA+CGG | + | chr3.3:76572901-76572920 | None:intergenic | 30.0% | |
| TTGAATTGTTTGTCCAAACT+GGG | + | chr3.3:76570480-76570499 | None:intergenic | 30.0% | |
| TTTCATTCAAATGGTCATTC+GGG | - | chr3.3:76571713-76571732 | MS.gene06681:intron | 30.0% | |
| ! | AAAGAAGTGTGAATCACATT+TGG | + | chr3.3:76572097-76572116 | None:intergenic | 30.0% |
| ! | ACGATTTTCATTGTCTTTCT+GGG | - | chr3.3:76571788-76571807 | MS.gene06681:intron | 30.0% |
| ! | ACTCAATTGTGATCTTTTAC+AGG | - | chr3.3:76573012-76573031 | MS.gene06681:CDS | 30.0% |
| ! | GAAGTAAATGTCTCTAAAGA+TGG | + | chr3.3:76571689-76571708 | None:intergenic | 30.0% |
| ! | TACGATTTTCATTGTCTTTC+TGG | - | chr3.3:76571787-76571806 | MS.gene06681:intron | 30.0% |
| ! | TGATCAGGAGAATTTTTCTT+TGG | - | chr3.3:76570850-76570869 | MS.gene06681:intron | 30.0% |
| ! | TTTTCACCCAAACTTGTAAT+AGG | + | chr3.3:76571661-76571680 | None:intergenic | 30.0% |
| !!! | CAAATGGTTTTGACAAGTTT+TGG | - | chr3.3:76571004-76571023 | MS.gene06681:CDS | 30.0% |
| !!! | TCATTTTTTGATCAAGCTCA+AGG | - | chr3.3:76571929-76571948 | MS.gene06681:intron | 30.0% |
| AAAAAAAAAGGAGCAGGGTT+AGG | + | chr3.3:76571268-76571287 | None:intergenic | 35.0% | |
| ACAGACTTGTCAAAACCATT+TGG | + | chr3.3:76570937-76570956 | None:intergenic | 35.0% | |
| AGGAAGCCTATTACAAGTTT+GGG | - | chr3.3:76571652-76571671 | MS.gene06681:intron | 35.0% | |
| ATGAAAAATCCAACCTGAAG+GGG | - | chr3.3:76572243-76572262 | MS.gene06681:intron | 35.0% | |
| ATGGAACTGAGAATAAACCA+AGG | - | chr3.3:76570222-76570241 | MS.gene06681:intron | 35.0% | |
| CATTTGTGAAGTCACATTTC+CGG | + | chr3.3:76572226-76572245 | None:intergenic | 35.0% | |
| CGTACAAGATTATTAGGCTA+AGG | - | chr3.3:76570454-76570473 | MS.gene06681:intron | 35.0% | |
| GACAGAAGTTGTAATGTCAA+AGG | - | chr3.3:76572319-76572338 | MS.gene06681:intron | 35.0% | |
| GTGTTGGATCGTGTTAATTT+CGG | - | chr3.3:76573054-76573073 | MS.gene06681:intron | 35.0% | |
| GTTGAATTGTTTGTCCAAAC+TGG | + | chr3.3:76570481-76570500 | None:intergenic | 35.0% | |
| GTTTGTTCTCTTGTAGTTGT+AGG | - | chr3.3:76570179-76570198 | MS.gene06681:CDS | 35.0% | |
| TAGGAAGCCTATTACAAGTT+TGG | - | chr3.3:76571651-76571670 | MS.gene06681:intron | 35.0% | |
| TATAAGTTTATACGTGCTCC+AGG | + | chr3.3:76572480-76572499 | None:intergenic | 35.0% | |
| TATGAATCACAACTTCCAAG+TGG | + | chr3.3:76572954-76572973 | None:intergenic | 35.0% | |
| TATGTTACTGTTAGTGGAGA+AGG | + | chr3.3:76571591-76571610 | None:intergenic | 35.0% | |
| TCACAGTGCTATACTGAATA+AGG | - | chr3.3:76570585-76570604 | MS.gene06681:intron | 35.0% | |
| TGAGTCAGTGTCTTGTAATA+TGG | + | chr3.3:76572997-76573016 | None:intergenic | 35.0% | |
| TGTTGGATCGTGTTAATTTC+GGG | - | chr3.3:76573055-76573074 | MS.gene06681:intron | 35.0% | |
| TTCTTACGATTCTAAACACC+TGG | - | chr3.3:76572459-76572478 | MS.gene06681:intron | 35.0% | |
| TTGTTGAGACTAAGTAACCT+TGG | + | chr3.3:76570242-76570261 | None:intergenic | 35.0% | |
| ! | AGGCAATTTTCCATTTAGGT+TGG | - | chr3.3:76571949-76571968 | MS.gene06681:intron | 35.0% |
| ! | ATTGTGATCTTTTACAGGTG+TGG | - | chr3.3:76573017-76573036 | MS.gene06681:CDS | 35.0% |
| ! | CTCAAGGCAATTTTCCATTT+AGG | - | chr3.3:76571945-76571964 | MS.gene06681:intron | 35.0% |
| !! | GTTTTTGAGGACACTATCAT+TGG | - | chr3.3:76573159-76573178 | MS.gene06681:CDS | 35.0% |
| !! | TTTAGGAACACAGTTTTGTC+AGG | - | chr3.3:76573102-76573121 | MS.gene06681:intron | 35.0% |
| !!! | TAGTTTTGGTTTGGTTTGCT+GGG | + | chr3.3:76571542-76571561 | None:intergenic | 35.0% |
| !!! | TTAGTTTTGGTTTGGTTTGC+TGG | + | chr3.3:76571543-76571562 | None:intergenic | 35.0% |
| AACACAATTGGTCAGGCAAA+TGG | - | chr3.3:76572176-76572195 | MS.gene06681:intron | 40.0% | |
| AACATAGCAGACCTAACACA+TGG | - | chr3.3:76571605-76571624 | MS.gene06681:intron | 40.0% | |
| ACTCTCAACATATGCACTCA+GGG | - | chr3.3:76570752-76570771 | MS.gene06681:intron | 40.0% | |
| ATAAGCTGCAAGAATACCAC+AGG | + | chr3.3:76570279-76570298 | None:intergenic | 40.0% | |
| ATACAACAGTGGCCGTATAT+AGG | - | chr3.3:76571362-76571381 | MS.gene06681:intron | 40.0% | |
| ATCTTCAGGGAGCTGTATTT+AGG | - | chr3.3:76573085-76573104 | MS.gene06681:intron | 40.0% | |
| ATGTCAAAGGCTTATGCAGT+TGG | - | chr3.3:76572332-76572351 | MS.gene06681:intron | 40.0% | |
| ATGTCAGATGCCAAGTTTGA+CGG | - | chr3.3:76572287-76572306 | MS.gene06681:intron | 40.0% | |
| ATGTTAGCATGGAGAGAAAC+AGG | + | chr3.3:76570812-76570831 | None:intergenic | 40.0% | |
| CTTTCTTCTTCTACACCAGT+TGG | + | chr3.3:76571144-76571163 | None:intergenic | 40.0% | |
| GGTAAAATGTCAAGAGTCTG+AGG | - | chr3.3:76571734-76571753 | MS.gene06681:intron | 40.0% | |
| GTCTGCTATGTTACTGTTAG+TGG | + | chr3.3:76571597-76571616 | None:intergenic | 40.0% | |
| GTGTGAATCACATTTGGCTA+AGG | + | chr3.3:76572091-76572110 | None:intergenic | 40.0% | |
| GTTCAATGAGACGCTTGATT+TGG | - | chr3.3:76570640-76570659 | MS.gene06681:intron | 40.0% | |
| TAACCAAACCCATGTGTAGA+GGG | + | chr3.3:76571633-76571652 | None:intergenic | 40.0% | |
| TACTCTCAACATATGCACTC+AGG | - | chr3.3:76570751-76570770 | MS.gene06681:intron | 40.0% | |
| TAGCGACAGAAATACAACAG+TGG | - | chr3.3:76571351-76571370 | MS.gene06681:intron | 40.0% | |
| TATGACGCTGGGATATACTA+CGG | - | chr3.3:76571415-76571434 | MS.gene06681:intron | 40.0% | |
| TCAACTGAGTCTGAATGTTG+AGG | - | chr3.3:76572393-76572412 | MS.gene06681:intron | 40.0% | |
| TCGTTAATGGCAATTGTCTG+TGG | - | chr3.3:76571102-76571121 | MS.gene06681:CDS | 40.0% | |
| TCTCTTGTAGTTGTAGGAGA+AGG | - | chr3.3:76570185-76570204 | MS.gene06681:CDS | 40.0% | |
| TGTCAAAGGCTTATGCAGTT+GGG | - | chr3.3:76572333-76572352 | MS.gene06681:intron | 40.0% | |
| TTCCAGTTTAGCATCGTCAA+AGG | + | chr3.3:76573133-76573152 | None:intergenic | 40.0% | |
| TTTGACGATGCTAAACTGGA+AGG | - | chr3.3:76573132-76573151 | MS.gene06681:intron | 40.0% | |
| TTTGGTTGAGTAGTTGCGTA+TGG | + | chr3.3:76570029-76570048 | None:intergenic | 40.0% | |
| ! | ACGACAAAGCATTAGATCTC+CGG | - | chr3.3:76572204-76572223 | MS.gene06681:intron | 40.0% |
| ! | GATCCCTTGTTGTCTCAATT+TGG | - | chr3.3:76571222-76571241 | MS.gene06681:intron | 40.0% |
| ! | GCATTTGTTGGCAACACAAT+TGG | - | chr3.3:76572164-76572183 | MS.gene06681:intron | 40.0% |
| !! | GTTTTGGCACTTGTCGTTAA+TGG | - | chr3.3:76571089-76571108 | MS.gene06681:CDS | 40.0% |
| !! | TTCATTGTCTTTCTGGGATC+TGG | - | chr3.3:76571794-76571813 | MS.gene06681:intron | 40.0% |
| !! | TTTGAAAGTGTTCAGCCACT+TGG | - | chr3.3:76572936-76572955 | MS.gene06681:CDS | 40.0% |
| !!! | AGTTTTGGTTTGGTTTGCTG+GGG | + | chr3.3:76571541-76571560 | None:intergenic | 40.0% |
| !!! | GTTGGTTTTCGCTTTGGTTT+TGG | + | chr3.3:76571492-76571511 | None:intergenic | 40.0% |
| AAAAAGGAGCAGGGTTAGGA+AGG | + | chr3.3:76571264-76571283 | None:intergenic | 45.0% | |
| AAAAGGAGCAGGGTTAGGAA+GGG | + | chr3.3:76571263-76571282 | None:intergenic | 45.0% | |
| AAACCACTCGAATATGACGC+TGG | - | chr3.3:76571403-76571422 | MS.gene06681:intron | 45.0% | |
| AACCAAACCCATGTGTAGAG+GGG | + | chr3.3:76571632-76571651 | None:intergenic | 45.0% | |
| AACCACTCGAATATGACGCT+GGG | - | chr3.3:76571404-76571423 | MS.gene06681:intron | 45.0% | |
| AACCTGAGTAGCAGCAGTAA+CGG | + | chr3.3:76570324-76570343 | None:intergenic | 45.0% | |
| ACCAGAGCAAGTGATTGTGA+AGG | + | chr3.3:76570080-76570099 | None:intergenic | 45.0% | |
| ACTCAGGGGAAGAGATCAAA+TGG | - | chr3.3:76570767-76570786 | MS.gene06681:intron | 45.0% | |
| AGCGTCATATTCGAGTGGTT+TGG | + | chr3.3:76571404-76571423 | None:intergenic | 45.0% | |
| AGTGGTGAAACATGGTCGTT+TGG | + | chr3.3:76570047-76570066 | None:intergenic | 45.0% | |
| ATGTGGTCATAGGAACCAAC+TGG | - | chr3.3:76571126-76571145 | MS.gene06681:intron | 45.0% | |
| ATTGGGCTCAGTTGACAATG+GGG | + | chr3.3:76572132-76572151 | None:intergenic | 45.0% | |
| CACCTTTGACGATGCTAAAC+TGG | - | chr3.3:76573128-76573147 | MS.gene06681:intron | 45.0% | |
| CACTCGGTATCATGTTAGCA+TGG | + | chr3.3:76570823-76570842 | None:intergenic | 45.0% | |
| CAGTTTAGCATCGTCAAAGG+TGG | + | chr3.3:76573130-76573149 | None:intergenic | 45.0% | |
| CCAGAGCAAGTGATTGTGAA+GGG | + | chr3.3:76570079-76570098 | None:intergenic | 45.0% | |
| CGGGAGTTGAATTGAAAGGT+TGG | + | chr3.3:76569993-76570012 | None:intergenic | 45.0% | |
| CTAACCAAACCCATGTGTAG+AGG | + | chr3.3:76571634-76571653 | None:intergenic | 45.0% | |
| CTCTCAACATATGCACTCAG+GGG | - | chr3.3:76570753-76570772 | MS.gene06681:intron | 45.0% | |
| GAAGCAGAAGTGGTGAAACA+TGG | + | chr3.3:76570055-76570074 | None:intergenic | 45.0% | |
| GATTGGGCTCAGTTGACAAT+GGG | + | chr3.3:76572133-76572152 | None:intergenic | 45.0% | |
| GCGTCATATTCGAGTGGTTT+GGG | + | chr3.3:76571403-76571422 | None:intergenic | 45.0% | |
| GGACTTCTCAAATGCAGTGT+TGG | - | chr3.3:76573038-76573057 | MS.gene06681:intron | 45.0% | |
| GTAGTTGCGTATGGACAAAC+TGG | + | chr3.3:76570020-76570039 | None:intergenic | 45.0% | |
| GTCAAAGGCTTATGCAGTTG+GGG | - | chr3.3:76572334-76572353 | MS.gene06681:intron | 45.0% | |
| TAAGACACTCCCAAAACTCG+CGG | - | chr3.3:76571325-76571344 | MS.gene06681:intron | 45.0% | |
| TATTAGGCTAAGGCCCAGTT+TGG | - | chr3.3:76570464-76570483 | MS.gene06681:intron | 45.0% | |
| TCAAAGGCTTATGCAGTTGG+GGG | - | chr3.3:76572335-76572354 | MS.gene06681:intron | 45.0% | |
| TCCTGATCAACTGTGACACT+CGG | + | chr3.3:76570839-76570858 | None:intergenic | 45.0% | |
| TGGCAATTGTCTGTGGAATG+TGG | - | chr3.3:76571109-76571128 | MS.gene06681:intron | 45.0% | |
| TGTCTGTGGAATGTGGTCAT+AGG | - | chr3.3:76571116-76571135 | MS.gene06681:intron | 45.0% | |
| TGTTGGCAACACAATTGGTC+AGG | - | chr3.3:76572169-76572188 | MS.gene06681:intron | 45.0% | |
| TTCGCGGGAGTTGAATTGAA+AGG | + | chr3.3:76569997-76570016 | None:intergenic | 45.0% | |
| TTCGGGAAAGCAGATCTTCA+GGG | - | chr3.3:76573072-76573091 | MS.gene06681:intron | 45.0% | |
| TTTCGGGAAAGCAGATCTTC+AGG | - | chr3.3:76573071-76573090 | MS.gene06681:intron | 45.0% | |
| ! | CTCTACACATGGGTTTGGTT+AGG | - | chr3.3:76571632-76571651 | MS.gene06681:intron | 45.0% |
| ! | GGTCTTGTACTAGGAAGTCT+CGG | - | chr3.3:76571815-76571834 | MS.gene06681:intron | 45.0% |
| ! | TTTGGTGTGCCGCCTATATA+CGG | + | chr3.3:76571377-76571396 | None:intergenic | 45.0% |
| !! | AAAATCAAGGGTGTTGCCTG+TGG | - | chr3.3:76570260-76570279 | MS.gene06681:intron | 45.0% |
| !! | ACTGGAAGGTGCAGTTTTTG+AGG | - | chr3.3:76573146-76573165 | MS.gene06681:CDS | 45.0% |
| !! | TCGCTATTTCCGCGAGTTTT+GGG | + | chr3.3:76571337-76571356 | None:intergenic | 45.0% |
| !! | TTCGAGTGGTTTGGGTGTTT+TGG | + | chr3.3:76571395-76571414 | None:intergenic | 45.0% |
| AAATACAACCATCGGCGACG+AGG | - | chr3.3:76573209-76573228 | MS.gene06681:CDS | 50.0% | |
| AAATGCACGTTCGCAGCGAT+TGG | + | chr3.3:76572150-76572169 | None:intergenic | 50.0% | |
| AAGCGAAAACCAACCACTGC+AGG | - | chr3.3:76571498-76571517 | MS.gene06681:intron | 50.0% | |
| AATACAACCATCGGCGACGA+GGG | - | chr3.3:76573210-76573229 | MS.gene06681:CDS | 50.0% | |
| AATGCACGTTCGCAGCGATT+GGG | + | chr3.3:76572149-76572168 | None:intergenic | 50.0% | |
| ACATGGTCCCCTCTACACAT+GGG | - | chr3.3:76571622-76571641 | MS.gene06681:intron | 50.0% | |
| ACCGAGTGTCACAGTTGATC+AGG | - | chr3.3:76570835-76570854 | MS.gene06681:intron | 50.0% | |
| ACCTGAGTAGCAGCAGTAAC+GGG | + | chr3.3:76570323-76570342 | None:intergenic | 50.0% | |
| AGCGAAAACCAACCACTGCA+GGG | - | chr3.3:76571499-76571518 | MS.gene06681:intron | 50.0% | |
| ATCCCAGCGTCATATTCGAG+TGG | + | chr3.3:76571409-76571428 | None:intergenic | 50.0% | |
| CAACAGTGGCCGTATATAGG+CGG | - | chr3.3:76571365-76571384 | MS.gene06681:intron | 50.0% | |
| CATGTCAGCACCGTCAAACT+TGG | + | chr3.3:76572300-76572319 | None:intergenic | 50.0% | |
| CCCTTCACAATCACTTGCTC+TGG | - | chr3.3:76570076-76570095 | MS.gene06681:CDS | 50.0% | |
| CGATTGGGCTCAGTTGACAA+TGG | + | chr3.3:76572134-76572153 | None:intergenic | 50.0% | |
| GAAGGCGAAGCTGAGTTAGA+TGG | - | chr3.3:76570203-76570222 | MS.gene06681:intron | 50.0% | |
| TGTAGAGGGGACCATGTGTT+AGG | + | chr3.3:76571619-76571638 | None:intergenic | 50.0% | |
| TGTGAAGGGTGAAGCAGAAG+TGG | + | chr3.3:76570065-76570084 | None:intergenic | 50.0% | |
| TTGGGCTCAGTTGACAATGG+GGG | + | chr3.3:76572131-76572150 | None:intergenic | 50.0% | |
| !! | CGTATGGACAAACTGGTTCG+CGG | + | chr3.3:76570013-76570032 | None:intergenic | 50.0% |
| !! | CTGGGATCTGGTCTTGTACT+AGG | - | chr3.3:76571806-76571825 | MS.gene06681:intron | 50.0% |
| !! | GTATGGACAAACTGGTTCGC+GGG | + | chr3.3:76570012-76570031 | None:intergenic | 50.0% |
| !! | GTCGCTATTTCCGCGAGTTT+TGG | + | chr3.3:76571338-76571357 | None:intergenic | 50.0% |
| !! | TTTTTAGGCCCTGCAGTGGT+TGG | + | chr3.3:76571510-76571529 | None:intergenic | 50.0% |
| !!! | GCAGTGGTTGGTTTTCGCTT+TGG | + | chr3.3:76571498-76571517 | None:intergenic | 50.0% |
| !!! | TCGCTTTGGTTTTGGCTCCT+GGG | + | chr3.3:76571484-76571503 | None:intergenic | 50.0% |
| !!! | TTCGCTTTGGTTTTGGCTCC+TGG | + | chr3.3:76571485-76571504 | None:intergenic | 50.0% |
| CACATGGTCCCCTCTACACA+TGG | - | chr3.3:76571621-76571640 | MS.gene06681:intron | 55.0% | |
| CAGACAGAGTCTTCCCCTTC+AGG | + | chr3.3:76572259-76572278 | None:intergenic | 55.0% | |
| CAGAGTCTTCCCCTTCAGGT+TGG | + | chr3.3:76572255-76572274 | None:intergenic | 55.0% | |
| CGCTGCGAACGTGCATTTGT+TGG | - | chr3.3:76572152-76572171 | MS.gene06681:intron | 55.0% | |
| GTCCCCTCTACACATGGGTT+TGG | - | chr3.3:76571627-76571646 | MS.gene06681:intron | 55.0% | |
| TCCCGTTACTGCTGCTACTC+AGG | - | chr3.3:76570319-76570338 | MS.gene06681:intron | 55.0% | |
| ! | GCAGTTGGGGGCAGCTTTAA+AGG | - | chr3.3:76572347-76572366 | MS.gene06681:intron | 55.0% |
| ! | GCTGGGGCTCAGGTGTTTTT+AGG | + | chr3.3:76571525-76571544 | None:intergenic | 55.0% |
| !!! | GGTGTTTTTAGGCCCTGCAG+TGG | + | chr3.3:76571514-76571533 | None:intergenic | 55.0% |
| ! | ACGCAGAGGTATGCTGCTGC+TGG | + | chr3.3:76571448-76571467 | None:intergenic | 60.0% |
| !! | GGTTTGGTTTGCTGGGGCTC+AGG | + | chr3.3:76571535-76571554 | None:intergenic | 60.0% |
| GACGAGGGTCGAGCTGAGCT+AGG | - | chr3.3:76573225-76573244 | MS.gene06681:CDS | 65.0% | |
| TTGGCTCCTGGGACGCTCGT+TGG | + | chr3.3:76571473-76571492 | None:intergenic | 65.0% | |
| !! | GACGCTCGTTGGTGACGCAG+AGG | + | chr3.3:76571462-76571481 | None:intergenic | 65.0% |
| AGCTCGACCCTCGTCGCCGA+TGG | + | chr3.3:76573220-76573239 | None:intergenic | 70.0% | |
| GCGTCACCAACGAGCGTCCC+AGG | - | chr3.3:76571464-76571483 | MS.gene06681:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 76569986 | 76573257 | 76569986 | ID=MS.gene06681 |
| chr3.3 | mRNA | 76569986 | 76573257 | 76569986 | ID=MS.gene06681.t1;Parent=MS.gene06681 |
| chr3.3 | exon | 76573146 | 76573257 | 76573146 | ID=MS.gene06681.t1.exon1;Parent=MS.gene06681.t1 |
| chr3.3 | CDS | 76573146 | 76573257 | 76573146 | ID=cds.MS.gene06681.t1;Parent=MS.gene06681.t1 |
| chr3.3 | exon | 76572903 | 76573036 | 76572903 | ID=MS.gene06681.t1.exon2;Parent=MS.gene06681.t1 |
| chr3.3 | CDS | 76572903 | 76573036 | 76572903 | ID=cds.MS.gene06681.t1;Parent=MS.gene06681.t1 |
| chr3.3 | exon | 76570875 | 76571121 | 76570875 | ID=MS.gene06681.t1.exon3;Parent=MS.gene06681.t1 |
| chr3.3 | CDS | 76570875 | 76571121 | 76570875 | ID=cds.MS.gene06681.t1;Parent=MS.gene06681.t1 |
| chr3.3 | exon | 76569986 | 76570209 | 76569986 | ID=MS.gene06681.t1.exon4;Parent=MS.gene06681.t1 |
| chr3.3 | CDS | 76569986 | 76570209 | 76569986 | ID=cds.MS.gene06681.t1;Parent=MS.gene06681.t1 |
| Gene Sequence |
| Protein sequence |
