AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36610


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36610.t1 MTR_8g014910 98.873 355 4 0 1 355 1 355 0.0 719
MS.gene36610.t1 MTR_2g100620 77.054 353 81 0 2 354 1 353 0.0 572
MS.gene36610.t1 MTR_2g084585 62.691 327 121 1 29 355 27 352 2.20e-150 427
MS.gene36610.t1 MTR_4g056280 51.829 328 157 1 27 354 25 351 9.85e-124 360
MS.gene36610.t1 MTR_4g056160 51.368 329 158 2 29 355 24 352 4.06e-117 343
MS.gene36610.t1 MTR_5g084750 42.899 338 189 2 10 347 11 344 1.13e-97 293
MS.gene36610.t1 MTR_1g025780 43.314 344 186 5 8 347 15 353 1.24e-97 294
MS.gene36610.t1 MTR_3g464730 42.982 342 193 2 7 347 3 343 3.18e-96 290
MS.gene36610.t1 MTR_5g084790 40.922 347 203 2 2 347 1 346 4.94e-96 290
MS.gene36610.t1 MTR_3g082830 43.963 323 180 1 30 352 36 357 1.50e-95 288
MS.gene36610.t1 MTR_5g084770 40.816 343 194 4 8 347 7 343 2.34e-95 288
MS.gene36610.t1 MTR_5g074270 44.127 315 171 4 32 343 33 345 2.50e-91 278
MS.gene36610.t1 MTR_4g087985 40.510 353 195 6 10 354 15 360 5.24e-90 275
MS.gene36610.t1 MTR_8g075230 42.675 314 179 1 30 343 34 346 6.85e-89 271
MS.gene36610.t1 MTR_5g022630 43.492 315 175 3 30 342 41 354 5.05e-88 270
MS.gene36610.t1 MTR_2g015080 38.938 339 195 6 10 338 16 352 7.60e-87 266
MS.gene36610.t1 MTR_3g114090 40.698 344 196 4 10 347 9 350 4.54e-86 264
MS.gene36610.t1 MTR_8g075200 40.379 317 188 1 31 347 40 355 9.80e-86 265
MS.gene36610.t1 MTR_1g025760 40.841 333 188 5 10 337 56 384 1.75e-85 264
MS.gene36610.t1 MTR_5g022640 39.939 328 192 3 19 342 27 353 1.81e-85 263
MS.gene36610.t1 MTR_8g075220 40.373 322 186 3 31 347 39 359 7.51e-84 259
MS.gene36610.t1 MTR_3g114120 42.038 314 180 2 30 343 45 356 2.18e-83 258
MS.gene36610.t1 MTR_1g025680 38.857 350 206 4 4 347 1 348 1.05e-82 259
MS.gene36610.t1 MTR_1g025720 40.575 313 184 2 31 343 36 346 1.25e-82 255
MS.gene36610.t1 MTR_1g025700 41.325 317 184 2 27 343 45 359 2.63e-82 255
MS.gene36610.t1 MTR_1108s0010 51.364 220 95 2 135 354 3 210 7.09e-76 233
MS.gene36610.t1 MTR_5g083040 36.677 319 192 5 31 342 31 346 4.32e-71 226
MS.gene36610.t1 MTR_1g025910 38.689 305 182 4 37 340 41 341 3.17e-68 219
MS.gene36610.t1 MTR_7g116570 34.561 353 220 8 1 347 1 348 2.17e-65 211
MS.gene36610.t1 MTR_7g116500 34.682 346 212 8 12 348 8 348 2.88e-65 211
MS.gene36610.t1 MTR_7g116520 34.582 347 214 8 4 347 12 348 5.31e-65 210
MS.gene36610.t1 MTR_1g069175 34.884 344 208 7 8 346 16 348 1.44e-63 207
MS.gene36610.t1 MTR_1g079540 35.826 321 197 7 32 348 31 346 6.93e-63 205
MS.gene36610.t1 MTR_7g116510 33.429 347 221 7 4 347 1 340 3.77e-62 203
MS.gene36610.t1 MTR_8g079050 33.048 351 225 6 5 347 10 358 1.02e-61 202
MS.gene36610.t1 MTR_0565s0010 35.345 348 207 10 1 343 8 342 1.91e-61 201
MS.gene36610.t1 MTR_6g021530 33.616 354 218 9 1 347 1 344 1.22e-60 199
MS.gene36610.t1 MTR_5g009100 33.230 322 194 5 35 346 49 359 2.50e-60 199
MS.gene36610.t1 MTR_3g052490 35.174 344 207 10 12 346 11 347 8.89e-60 197
MS.gene36610.t1 MTR_4g019880 33.144 353 224 9 2 347 1 348 2.22e-59 196
MS.gene36610.t1 MTR_8g087890 36.657 341 199 10 10 343 10 340 4.53e-59 195
MS.gene36610.t1 MTR_1g024890 33.235 340 218 7 12 347 12 346 8.53e-59 194
MS.gene36610.t1 MTR_1g079530 34.195 348 212 8 12 354 9 344 1.72e-58 193
MS.gene36610.t1 MTR_2g033920 34.783 322 202 6 30 347 33 350 5.29e-58 192
MS.gene36610.t1 MTR_3g024510 33.728 338 212 8 11 343 17 347 2.35e-57 191
MS.gene36610.t1 MTR_5g078210 35.088 342 204 11 12 346 6 336 2.66e-57 190
MS.gene36610.t1 MTR_5g093090 33.239 352 219 9 4 347 1 344 1.43e-56 188
MS.gene36610.t1 MTR_4g122200 33.056 360 221 9 2 350 3 353 2.37e-56 188
MS.gene36610.t1 MTR_3g005650 34.706 340 207 10 6 343 9 335 2.59e-55 185
MS.gene36610.t1 MTR_3g435540 34.659 352 207 12 4 347 1 337 1.27e-54 183
MS.gene36610.t1 MTR_8g031420 34.483 319 190 9 32 343 35 341 1.30e-54 183
MS.gene36610.t1 MTR_7g008060 31.250 352 218 8 2 347 1 334 1.54e-54 183
MS.gene36610.t1 MTR_3g052480 33.623 345 212 11 12 346 12 349 4.83e-54 182
MS.gene36610.t1 MTR_3g052580 32.945 343 214 11 12 346 8 342 5.98e-54 182
MS.gene36610.t1 MTR_3g052580 32.945 343 214 11 12 346 7 341 1.38e-53 182
MS.gene36610.t1 MTR_4g035353 31.412 347 228 9 1 343 1 341 1.39e-53 181
MS.gene36610.t1 MTR_4g108690 34.796 319 193 9 36 347 31 341 1.57e-53 181
MS.gene36610.t1 MTR_4g036375 54.902 153 69 0 26 178 24 176 8.79e-53 173
MS.gene36610.t1 MTR_2g044100 34.242 330 204 7 32 354 43 366 1.72e-52 179
MS.gene36610.t1 MTR_8g031430 34.049 326 188 11 32 346 37 346 1.43e-51 175
MS.gene36610.t1 MTR_3g005660 35.093 322 195 10 30 343 34 349 2.70e-51 175
MS.gene36610.t1 MTR_2g033930 30.548 347 225 6 8 347 8 345 7.63e-51 173
MS.gene36610.t1 MTR_0009s0250 35.385 325 186 12 30 348 31 337 8.48e-51 173
MS.gene36610.t1 MTR_8g022790 33.435 329 199 9 32 355 37 350 1.53e-50 172
MS.gene36610.t1 MTR_8g074570 30.211 331 220 4 31 355 37 362 5.90e-49 169
MS.gene36610.t1 MTR_8g022810 31.412 347 223 9 7 346 17 355 8.83e-49 168
MS.gene36610.t1 MTR_8g031390 31.988 322 193 9 32 343 37 342 1.50e-48 168
MS.gene36610.t1 MTR_3g098270 32.188 320 209 6 29 343 31 347 1.82e-48 168
MS.gene36610.t1 MTR_8g031400 32.500 320 195 10 32 343 37 343 3.31e-47 164
MS.gene36610.t1 MTR_8g074560 30.682 352 223 13 8 346 6 349 2.57e-46 162
MS.gene36610.t1 MTR_8g087870 30.925 346 219 9 2 344 1 329 1.19e-45 159
MS.gene36610.t1 MTR_6g049230 57.377 122 51 1 207 328 74 194 1.82e-45 154
MS.gene36610.t1 MTR_2g017925 34.796 319 186 11 30 343 31 332 1.84e-45 159
MS.gene36610.t1 MTR_2g033920 35.338 266 165 5 30 291 33 295 1.43e-44 155
MS.gene36610.t1 MTR_1g030268 32.345 371 213 13 1 346 9 366 4.16e-44 156
MS.gene36610.t1 MTR_3g021460 33.041 342 203 11 10 345 10 331 5.32e-44 155
MS.gene36610.t1 MTR_2g017875 30.723 332 210 8 18 343 20 337 7.99e-43 152
MS.gene36610.t1 MTR_4g056220 53.488 129 59 1 226 354 61 188 1.13e-42 147
MS.gene36610.t1 MTR_8g074580 27.665 394 232 8 10 354 19 408 1.24e-42 153
MS.gene36610.t1 MTR_3g023220 33.642 324 185 11 30 345 31 332 1.53e-42 151
MS.gene36610.t1 MTR_4g036385 54.839 124 55 1 231 354 13 135 2.24e-42 144
MS.gene36610.t1 MTR_5g093090 33.108 296 184 7 4 291 1 290 3.31e-42 149
MS.gene36610.t1 MTR_5g078210 33.566 286 177 8 12 291 6 284 5.71e-42 149
MS.gene36610.t1 MTR_2g461580 31.977 344 210 12 7 344 5 330 9.07e-42 149
MS.gene36610.t1 MTR_8g031390 32.975 279 164 8 32 303 37 299 1.79e-41 147
MS.gene36610.t1 MTR_2g017955 33.714 350 206 14 7 346 6 339 1.97e-41 149
MS.gene36610.t1 MTR_1g030275 31.507 365 211 13 8 347 16 366 2.98e-39 143
MS.gene36610.t1 MTR_7g087190 30.570 386 219 14 1 347 1 376 4.71e-39 143
MS.gene36610.t1 MTR_2g017915 31.322 348 196 13 7 346 6 318 2.98e-38 140
MS.gene36610.t1 MTR_2g017965 31.686 344 207 14 13 343 9 337 3.32e-38 140
MS.gene36610.t1 MTR_1g030230 29.508 366 222 12 7 346 5 360 1.71e-36 136
MS.gene36610.t1 MTR_1g030220 30.448 335 199 11 32 342 40 364 6.91e-35 132
MS.gene36610.t1 MTR_2g015580 31.880 367 211 15 6 347 21 373 1.26e-34 131
MS.gene36610.t1 MTR_5g074210 43.972 141 76 3 207 346 66 204 2.06e-34 126
MS.gene36610.t1 MTR_1g079590 34.171 199 127 3 12 207 11 208 3.32e-34 125
MS.gene36610.t1 MTR_1g030340 30.460 348 193 12 31 346 41 371 2.71e-33 127
MS.gene36610.t1 MTR_1g030268 33.117 308 176 12 1 291 9 303 4.51e-33 125
MS.gene36610.t1 MTR_7g033150 26.684 386 226 14 2 347 1 369 1.65e-32 125
MS.gene36610.t1 MTR_3g463960 28.358 335 214 9 32 347 44 371 2.15e-32 125
MS.gene36610.t1 MTR_3g463950 28.358 335 214 9 32 347 44 371 2.15e-32 125
MS.gene36610.t1 MTR_3g463970 28.358 335 214 9 32 347 44 371 2.15e-32 125
MS.gene36610.t1 MTR_3g463940 28.358 335 214 9 32 347 44 371 2.15e-32 125
MS.gene36610.t1 MTR_8g089805 27.887 355 209 12 25 347 33 372 2.56e-32 125
MS.gene36610.t1 MTR_6g049220 38.547 179 65 1 27 205 25 158 2.62e-32 119
MS.gene36610.t1 MTR_7g113860 29.708 377 222 13 2 347 1 365 4.34e-32 124
MS.gene36610.t1 MTR_7g033165 31.054 351 189 15 31 347 32 363 5.26e-32 124
MS.gene36610.t1 MTR_8g022810 28.242 347 181 11 7 346 17 302 1.33e-31 121
MS.gene36610.t1 MTR_5g087690 28.485 330 203 11 28 344 46 355 1.45e-31 122
MS.gene36610.t1 MTR_3g463930 28.011 357 222 10 18 347 30 378 4.32e-31 121
MS.gene36610.t1 MTR_1g082390 29.255 376 218 11 4 347 1 360 7.81e-31 120
MS.gene36610.t1 MTR_7g113860 30.725 345 198 14 31 347 28 359 1.33e-30 120
MS.gene36610.t1 MTR_7g111780 29.607 331 204 13 31 347 34 349 5.48e-30 118
MS.gene36610.t1 MTR_0127s0040 31.674 221 141 7 130 345 4 219 1.93e-29 114
MS.gene36610.t1 MTR_8g028160 28.219 365 220 12 7 343 13 363 5.13e-29 115
MS.gene36610.t1 MTR_6g007100 27.446 368 221 14 4 347 1 346 1.03e-28 114
MS.gene36610.t1 MTR_2g043980 29.973 367 214 14 1 347 1 344 1.18e-28 114
MS.gene36610.t1 MTR_1g030265 29.392 296 180 8 77 346 41 333 1.36e-28 114
MS.gene36610.t1 MTR_7g116870 26.722 363 230 12 3 342 6 355 2.49e-28 114
MS.gene36610.t1 MTR_2g087292 27.812 320 148 7 30 348 31 268 2.75e-28 111
MS.gene36610.t1 MTR_2g015630 29.254 335 202 15 37 347 36 359 2.76e-28 114
MS.gene36610.t1 MTR_2g018015 37.306 193 115 5 26 214 30 220 7.50e-28 111
MS.gene36610.t1 MTR_5g093090 36.275 204 119 7 4 199 1 201 9.63e-28 108
MS.gene36610.t1 MTR_2g079090 28.011 357 220 13 9 347 5 342 1.96e-27 111
MS.gene36610.t1 MTR_0029s0050 28.889 360 213 15 9 347 5 342 2.15e-27 110
MS.gene36610.t1 MTR_2g015590 29.619 341 202 13 32 347 31 358 3.63e-27 110
MS.gene36610.t1 MTR_6g007095 27.049 366 232 10 4 347 13 365 7.37e-27 112
MS.gene36610.t1 MTR_6g007095 27.108 332 205 12 35 347 368 681 2.08e-23 102
MS.gene36610.t1 MTR_2g079080 28.492 358 217 14 9 347 5 342 7.46e-27 109
MS.gene36610.t1 MTR_0029s0100 28.889 360 213 15 9 347 5 342 1.09e-26 108
MS.gene36610.t1 MTR_3g069780 28.783 337 207 13 32 347 30 354 1.35e-26 108
MS.gene36610.t1 MTR_3g438030 28.869 336 208 13 32 347 30 354 1.50e-25 106
MS.gene36610.t1 MTR_7g033155 24.808 391 236 12 1 347 7 383 1.87e-25 106
MS.gene36610.t1 MTR_8g038680 26.027 365 234 12 9 347 3 357 3.12e-24 102
MS.gene36610.t1 MTR_2g015650 29.204 339 205 14 32 347 31 357 9.08e-24 101
MS.gene36610.t1 MTR_6g007090 26.316 342 211 11 31 347 38 363 1.20e-23 100
MS.gene36610.t1 MTR_3g448360 27.614 373 223 15 11 352 3 359 2.56e-23 99.8
MS.gene36610.t1 MTR_7g111780 27.519 258 166 6 102 347 2 250 1.59e-22 95.9
MS.gene36610.t1 MTR_4g104240 26.176 340 212 12 33 350 40 362 4.32e-22 96.7
MS.gene36610.t1 MTR_8g089805 25.614 285 170 9 95 347 30 304 2.96e-21 93.2
MS.gene36610.t1 MTR_7g104220 26.140 329 213 12 29 348 39 346 3.45e-21 93.6
MS.gene36610.t1 MTR_7g113860 29.889 271 154 10 105 347 29 291 5.78e-21 92.4
MS.gene36610.t1 MTR_3g069520 26.957 345 211 12 32 352 30 357 1.60e-20 92.0
MS.gene36610.t1 MTR_2g015670 27.761 335 201 12 32 347 31 343 1.26e-19 89.4
MS.gene36610.t1 MTR_7g033165 29.825 285 160 12 31 291 32 300 1.64e-19 88.2
MS.gene36610.t1 MTR_1g060500 27.988 343 184 13 33 346 41 349 2.75e-19 88.2
MS.gene36610.t1 MTR_2g017925 30.594 219 134 8 129 343 25 229 2.83e-19 86.7
MS.gene36610.t1 MTR_8g062580 38.318 107 64 2 237 343 73 177 6.50e-19 85.1
MS.gene36610.t1 MTR_1g092760 25.559 313 202 13 33 336 40 330 8.47e-19 86.7
MS.gene36610.t1 MTR_1g092750 25.472 318 209 12 33 342 41 338 9.60e-19 86.7
MS.gene36610.t1 MTR_1g092690 26.582 316 194 13 33 336 52 341 2.33e-18 85.5
MS.gene36610.t1 MTR_5g084880 36.538 104 66 0 188 291 9 112 7.78e-18 79.7
MS.gene36610.t1 MTR_1g092740 26.032 315 198 13 33 336 39 329 1.04e-17 83.6
MS.gene36610.t1 MTR_8g012540 25.240 313 206 9 9 302 3 306 1.19e-17 83.2
MS.gene36610.t1 MTR_6g034400 34.959 123 80 0 83 205 2 124 3.34e-17 77.4
MS.gene36610.t1 MTR_2g015590 28.723 282 166 11 32 291 31 299 5.33e-17 81.3
MS.gene36610.t1 MTR_1g060490 25.360 347 196 12 33 354 38 346 2.00e-16 79.7
MS.gene36610.t1 MTR_2g043990 28.339 307 163 12 5 290 67 337 3.57e-15 75.9
MS.gene36610.t1 MTR_4g056290 54.386 57 25 1 294 350 47 102 2.30e-14 69.3
MS.gene36610.t1 MTR_5g062890 45.349 86 42 2 1 85 1 82 4.59e-14 67.8
MS.gene36610.t1 MTR_5g062900 48.438 64 28 1 191 254 51 109 4.88e-12 63.2
MS.gene36610.t1 MTR_0717s0010 53.448 58 27 0 41 98 15 72 8.86e-12 61.6
MS.gene36610.t1 MTR_2g017895 22.677 269 173 8 80 343 5 243 2.04e-11 63.9
MS.gene36610.t1 MTR_1g079570 26.829 123 87 3 225 347 4 123 3.43e-11 61.2
MS.gene36610.t1 MTR_5g093550 53.571 56 24 2 291 346 79 132 9.74e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36610.t1 AT3G16370 75.904 332 78 1 23 354 23 352 0.0 525
MS.gene36610.t1 AT5G22810 60.303 330 127 2 29 355 31 359 4.12e-148 422
MS.gene36610.t1 AT5G03810 56.620 355 151 3 2 355 1 353 1.74e-144 413
MS.gene36610.t1 AT5G03820 55.899 356 153 3 2 355 4 357 4.75e-142 407
MS.gene36610.t1 AT5G03820 55.899 356 153 3 2 355 32 385 2.12e-141 406
MS.gene36610.t1 AT3G53100 51.695 354 167 3 1 354 1 350 3.99e-130 376
MS.gene36610.t1 AT5G42170 45.625 320 166 3 30 347 48 361 1.32e-100 302
MS.gene36610.t1 AT2G04570 42.363 347 195 3 1 347 1 342 3.64e-99 297
MS.gene36610.t1 AT2G42990 41.956 317 183 1 30 346 26 341 7.57e-94 284
MS.gene36610.t1 AT3G14820 43.789 322 172 5 28 347 28 342 2.03e-93 283
MS.gene36610.t1 AT5G45960 44.551 312 166 4 30 336 45 354 3.23e-93 283
MS.gene36610.t1 AT1G75880 44.099 322 179 1 26 347 46 366 1.18e-91 279
MS.gene36610.t1 AT1G75900 41.124 338 197 2 10 347 21 356 2.02e-91 278
MS.gene36610.t1 AT1G75880 43.963 323 179 2 26 347 46 367 8.06e-90 275
MS.gene36610.t1 AT1G20120 42.547 322 184 1 26 347 72 392 9.11e-90 275
MS.gene36610.t1 AT1G59406 41.642 341 187 6 10 347 10 341 2.31e-89 272
MS.gene36610.t1 AT1G59030 41.642 341 187 6 10 347 10 341 2.31e-89 272
MS.gene36610.t1 AT1G58725 41.642 341 187 6 10 347 10 341 2.31e-89 272
MS.gene36610.t1 AT1G06990 40.062 322 189 3 28 347 33 352 9.80e-89 271
MS.gene36610.t1 AT2G30310 41.441 333 181 7 13 338 16 341 2.05e-88 270
MS.gene36610.t1 AT4G26790 39.329 328 192 2 20 347 23 343 1.89e-87 268
MS.gene36610.t1 AT4G26790 39.329 328 192 2 20 347 23 343 1.89e-87 268
MS.gene36610.t1 AT1G75890 42.675 314 178 2 31 343 46 358 2.10e-87 268
MS.gene36610.t1 AT2G30220 40.390 359 198 8 2 351 1 352 2.62e-87 267
MS.gene36610.t1 AT1G75890 42.675 314 178 2 31 343 75 387 3.67e-87 268
MS.gene36610.t1 AT2G40250 40.625 320 181 4 30 343 34 350 1.02e-86 266
MS.gene36610.t1 AT1G58430 40.233 343 196 7 2 337 1 341 1.57e-86 265
MS.gene36610.t1 AT2G31540 39.326 356 199 8 2 346 1 350 2.95e-86 265
MS.gene36610.t1 AT1G58520 42.368 321 168 6 30 347 28 334 2.43e-85 262
MS.gene36610.t1 AT1G58525 42.368 321 168 6 30 347 28 334 2.43e-85 262
MS.gene36610.t1 AT2G24560 40.058 342 197 6 2 337 1 340 9.04e-85 261
MS.gene36610.t1 AT1G75890 40.979 327 178 3 31 343 46 371 1.03e-83 259
MS.gene36610.t1 AT3G43570 38.889 342 170 6 8 347 8 312 7.96e-81 249
MS.gene36610.t1 AT5G63170 39.881 336 186 4 4 338 1 321 6.08e-80 248
MS.gene36610.t1 AT5G45950 38.679 318 188 5 30 347 38 348 1.91e-79 247
MS.gene36610.t1 AT1G20132 37.072 321 201 1 26 346 55 374 1.93e-74 235
MS.gene36610.t1 AT1G23500 39.437 355 195 6 2 351 1 340 2.71e-70 223
MS.gene36610.t1 AT1G20130 35.843 332 199 3 26 347 198 525 7.81e-69 225
MS.gene36610.t1 AT1G20130 35.843 332 199 3 26 347 178 505 7.91e-69 224
MS.gene36610.t1 AT1G20135 37.168 339 195 6 1 338 1 322 1.24e-67 216
MS.gene36610.t1 AT1G75920 35.838 346 209 2 4 347 1 335 1.79e-67 216
MS.gene36610.t1 AT3G43550 38.328 287 168 4 8 291 6 286 7.45e-67 213
MS.gene36610.t1 AT1G73610 36.335 322 189 3 27 347 30 336 3.54e-66 213
MS.gene36610.t1 AT2G24560 37.458 299 181 4 2 294 1 299 2.54e-65 209
MS.gene36610.t1 AT3G04290 34.195 348 220 7 4 347 1 343 1.39e-63 207
MS.gene36610.t1 AT1G75920 34.366 355 205 3 10 347 2 345 5.64e-63 204
MS.gene36610.t1 AT1G75910 34.294 347 213 4 4 347 1 335 1.44e-61 201
MS.gene36610.t1 AT1G29670 36.283 339 202 10 11 343 10 340 5.23e-61 200
MS.gene36610.t1 AT1G29670 36.000 350 208 11 2 343 67 408 2.29e-60 200
MS.gene36610.t1 AT5G15720 37.346 324 190 9 29 345 27 344 3.17e-60 198
MS.gene36610.t1 AT4G10950 31.611 329 202 6 29 346 68 384 5.42e-60 198
MS.gene36610.t1 AT2G23540 34.639 332 207 6 32 355 48 377 8.45e-60 197
MS.gene36610.t1 AT5G33370 32.861 353 219 9 4 347 1 344 3.66e-58 192
MS.gene36610.t1 AT3G50400 33.053 357 228 7 8 355 10 364 2.00e-57 191
MS.gene36610.t1 AT4G28780 31.609 348 230 7 8 351 6 349 2.58e-57 190
MS.gene36610.t1 AT4G10950 31.307 329 199 7 29 346 68 380 3.62e-57 191
MS.gene36610.t1 AT5G08460 33.521 355 221 9 1 343 12 363 1.06e-56 189
MS.gene36610.t1 AT1G75930 33.626 342 210 5 10 347 7 335 1.14e-56 188
MS.gene36610.t1 AT5G37690 33.728 338 211 9 13 346 10 338 1.46e-56 188
MS.gene36610.t1 AT5G18430 32.288 319 211 3 32 347 28 344 1.98e-56 188
MS.gene36610.t1 AT1G71691 37.072 321 189 10 27 343 50 361 2.00e-56 189
MS.gene36610.t1 AT1G29660 35.220 318 196 7 30 343 30 341 4.07e-56 187
MS.gene36610.t1 AT1G53920 34.848 330 201 9 27 350 43 364 3.85e-55 185
MS.gene36610.t1 AT1G75920 32.370 346 190 3 4 347 1 304 1.78e-54 181
MS.gene36610.t1 AT4G18970 34.268 321 202 7 27 343 23 338 3.25e-54 182
MS.gene36610.t1 AT4G18970 34.268 321 202 7 27 343 23 338 1.01e-53 182
MS.gene36610.t1 AT1G33811 34.203 345 213 10 8 343 10 349 2.30e-53 180
MS.gene36610.t1 AT5G41890 32.861 353 213 8 9 347 15 357 4.02e-53 180
MS.gene36610.t1 AT1G71250 33.239 355 220 8 2 343 1 351 4.22e-53 179
MS.gene36610.t1 AT1G75920 34.576 295 180 2 55 347 24 307 1.10e-52 177
MS.gene36610.t1 AT5G37690 33.432 338 204 10 13 346 10 330 1.22e-52 177
MS.gene36610.t1 AT5G45670 32.164 342 222 8 6 342 2 338 1.89e-52 177
MS.gene36610.t1 AT1G74460 34.375 320 193 10 36 347 27 337 8.24e-51 173
MS.gene36610.t1 AT2G19060 35.913 323 178 14 29 342 27 329 5.12e-49 168
MS.gene36610.t1 AT5G55050 32.927 328 204 11 30 347 37 358 5.33e-49 169
MS.gene36610.t1 AT2G31550 37.383 214 122 5 139 346 2 209 8.87e-49 164
MS.gene36610.t1 AT2G19010 32.249 338 202 11 13 343 11 328 1.02e-47 165
MS.gene36610.t1 AT2G19050 33.229 319 190 10 30 343 29 329 1.46e-47 164
MS.gene36610.t1 AT2G19010 32.249 338 202 11 13 343 41 358 1.97e-47 165
MS.gene36610.t1 AT5G40990 30.790 367 236 9 2 355 1 362 2.60e-47 164
MS.gene36610.t1 AT3G14225 31.532 333 216 7 32 355 37 366 2.78e-46 162
MS.gene36610.t1 AT1G53940 31.063 367 232 9 5 355 3 364 4.75e-46 161
MS.gene36610.t1 AT3G14225 32.024 331 213 8 32 355 37 362 1.04e-45 160
MS.gene36610.t1 AT5G15720 37.037 270 159 7 29 291 27 292 4.48e-45 157
MS.gene36610.t1 AT1G71120 32.609 322 201 8 30 346 29 339 5.68e-45 158
MS.gene36610.t1 AT5G33370 32.323 297 185 7 4 291 1 290 4.58e-44 155
MS.gene36610.t1 AT1G71691 36.431 269 160 8 27 291 50 311 1.22e-41 148
MS.gene36610.t1 AT1G53990 28.814 354 220 11 8 344 5 343 9.42e-39 142
MS.gene36610.t1 AT4G16230 36.199 221 133 4 30 245 28 245 5.63e-38 136
MS.gene36610.t1 AT2G19050 33.200 250 156 7 30 277 29 269 9.50e-38 137
MS.gene36610.t1 AT5G15720 32.567 261 166 7 92 345 56 313 3.11e-36 134
MS.gene36610.t1 AT5G14450 28.647 377 224 12 1 347 10 371 4.57e-36 135
MS.gene36610.t1 AT4G30140 28.076 317 207 9 31 344 32 330 5.07e-35 131
MS.gene36610.t1 AT3G05180 30.337 356 203 11 22 347 26 366 1.37e-34 130
MS.gene36610.t1 AT1G71691 33.071 254 159 8 94 343 14 260 2.42e-34 128
MS.gene36610.t1 AT1G53940 30.769 299 191 7 5 291 3 297 3.95e-34 128
MS.gene36610.t1 AT1G28580 29.917 361 215 14 9 347 20 364 7.74e-34 129
MS.gene36610.t1 AT1G28610 30.495 364 208 14 9 347 14 357 9.35e-34 129
MS.gene36610.t1 AT1G54790 27.005 374 234 11 1 347 1 362 1.67e-33 128
MS.gene36610.t1 AT1G28570 29.730 370 228 13 1 347 1 361 3.74e-33 127
MS.gene36610.t1 AT1G09390 28.659 328 205 10 31 343 36 349 1.17e-32 125
MS.gene36610.t1 AT1G28650 28.492 358 228 12 10 347 15 364 2.06e-32 125
MS.gene36610.t1 AT2G03980 28.660 321 210 9 31 343 42 351 2.36e-32 124
MS.gene36610.t1 AT2G03980 28.660 321 210 9 31 343 42 351 2.36e-32 124
MS.gene36610.t1 AT2G03980 28.660 321 210 9 31 343 42 351 2.36e-32 124
MS.gene36610.t1 AT2G03980 28.660 321 210 9 31 343 42 351 2.36e-32 124
MS.gene36610.t1 AT4G01130 28.686 373 220 13 10 352 14 370 2.61e-32 125
MS.gene36610.t1 AT1G28640 28.412 359 227 12 10 347 13 362 2.93e-32 125
MS.gene36610.t1 AT1G28600 28.571 364 215 15 9 347 14 357 4.36e-32 124
MS.gene36610.t1 AT1G67830 28.205 351 215 11 23 346 21 361 4.51e-32 124
MS.gene36610.t1 AT2G27360 28.883 367 224 13 9 353 16 367 4.90e-32 124
MS.gene36610.t1 AT3G48460 28.701 331 212 11 33 347 39 361 4.98e-32 124
MS.gene36610.t1 AT1G56670 27.966 354 220 11 8 343 16 352 6.76e-32 123
MS.gene36610.t1 AT1G31550 29.041 365 212 14 9 347 19 362 3.50e-31 122
MS.gene36610.t1 AT1G54030 29.283 321 192 11 23 339 48 337 6.84e-30 119
MS.gene36610.t1 AT3G14220 28.571 329 204 12 31 350 31 337 8.17e-30 117
MS.gene36610.t1 AT1G54020 27.673 318 207 9 30 343 29 327 8.26e-30 117
MS.gene36610.t1 AT1G28670 27.298 359 232 10 10 347 13 363 5.45e-29 115
MS.gene36610.t1 AT1G28590 28.804 368 220 14 8 347 10 363 1.11e-28 115
MS.gene36610.t1 AT1G54010 26.647 334 217 8 30 354 32 346 2.29e-28 114
MS.gene36610.t1 AT1G31550 28.297 364 213 14 9 347 19 359 6.21e-28 113
MS.gene36610.t1 AT1G28660 27.577 359 230 11 10 347 13 362 8.82e-28 112
MS.gene36610.t1 AT3G62280 28.144 334 205 11 31 347 35 350 1.45e-27 111
MS.gene36610.t1 AT3G26430 27.989 368 222 13 2 339 1 355 1.28e-26 109
MS.gene36610.t1 AT1G54000 26.124 356 234 11 8 354 11 346 1.34e-26 109
MS.gene36610.t1 AT1G28660 27.577 359 229 12 10 347 13 361 1.67e-26 108
MS.gene36610.t1 AT1G54790 25.753 365 230 12 10 347 11 361 2.64e-25 105
MS.gene36610.t1 AT3G27950 26.415 371 235 13 6 352 4 360 3.16e-25 105
MS.gene36610.t1 AT2G04020 33.831 201 122 6 31 227 42 235 4.01e-25 102
MS.gene36610.t1 AT2G04020 33.831 201 122 6 31 227 42 235 7.07e-25 103
MS.gene36610.t1 AT4G01130 26.644 289 173 9 96 352 3 284 5.13e-22 95.1
MS.gene36610.t1 AT5G03610 26.266 316 200 10 33 336 44 338 4.87e-21 93.2
MS.gene36610.t1 AT3G09930 27.848 316 196 12 33 336 40 335 5.65e-21 93.2
MS.gene36610.t1 AT3G09930 27.848 316 196 12 33 336 40 335 5.65e-21 93.2
MS.gene36610.t1 AT1G56670 28.094 299 183 10 8 291 16 297 5.69e-21 92.0
MS.gene36610.t1 AT5G45910 26.724 348 224 12 32 355 30 370 6.14e-21 93.2
MS.gene36610.t1 AT3G14210 27.607 326 198 14 32 343 36 337 1.04e-20 92.8
MS.gene36610.t1 AT1G28580 27.368 285 179 11 82 347 8 283 1.75e-20 90.9
MS.gene36610.t1 AT1G54030 30.116 259 150 9 23 277 48 279 1.77e-20 90.9
MS.gene36610.t1 AT1G54790 24.041 391 230 13 10 347 11 387 2.79e-20 91.7
MS.gene36610.t1 AT5G03600 25.501 349 221 14 2 336 13 336 1.79e-18 85.9
MS.gene36610.t1 AT5G03600 26.667 315 198 13 30 336 12 301 2.26e-18 85.1
MS.gene36610.t1 AT4G16220 42.373 118 64 2 1 118 1 114 2.76e-18 83.6
MS.gene36610.t1 AT1G54020 25.194 258 175 6 87 343 1 241 2.92e-17 81.3
MS.gene36610.t1 AT1G54020 25.194 258 175 6 87 343 1 241 2.92e-17 81.3
MS.gene36610.t1 AT1G54020 25.194 258 175 6 87 343 1 241 2.92e-17 81.3
MS.gene36610.t1 AT3G62280 28.464 267 159 10 31 283 35 283 4.19e-17 81.3
MS.gene36610.t1 AT1G54020 28.877 187 127 5 159 343 10 192 5.51e-17 79.7
MS.gene36610.t1 AT4G16233 33.333 108 71 1 240 347 6 112 4.01e-15 72.0
MS.gene36610.t1 AT5G03980 26.609 233 151 8 131 351 94 318 4.14e-15 75.9
MS.gene36610.t1 AT1G28570 25.000 204 133 6 158 347 1 198 8.04e-14 70.5
MS.gene36610.t1 AT1G28570 25.000 204 133 6 158 347 92 289 1.84e-13 70.9
MS.gene36610.t1 AT3G14210 26.126 222 143 8 130 343 1 209 1.11e-11 64.7
MS.gene36610.t1 AT1G28600 30.189 212 111 13 9 204 14 204 1.62e-11 63.9
MS.gene36610.t1 AT1G28610 32.086 187 96 10 9 180 14 184 1.73e-11 64.3

Find 71 sgRNAs with CRISPR-Local

Find 168 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAACAAGTTCCTAGTGATTT+TGG 0.126371 8.4:-76447730 None:intergenic
CCTGCTGCAAGGACTTTATT+TGG 0.195553 8.4:+76447244 MS.gene36610:CDS
CTCATTCACAAGCTTTATTA+AGG 0.218846 8.4:+76447015 MS.gene36610:CDS
GTTCAAAACCCTTCAAATTT+CGG 0.249883 8.4:+76447415 MS.gene36610:CDS
TATTCTAACTGTTGGGATAA+TGG 0.256406 8.4:-76446812 None:intergenic
GGCAAGTTGGCTCAGGTTGC+TGG 0.317149 8.4:+76446851 MS.gene36610:CDS
ATGCAACTCAGTATGTGTTT+TGG 0.323360 8.4:+76447755 MS.gene36610:CDS
GGATTAGGAGCTAGGAAAAT+TGG 0.330733 8.4:+76447190 MS.gene36610:CDS
GCTGATAACTTAATTATTGC+CGG 0.335224 8.4:+76447817 MS.gene36610:CDS
AACTTTGCTTCAGCTGCATC+TGG 0.352556 8.4:+76446163 MS.gene36610:CDS
TCAGGTTGCTGGCAGTAAAA+AGG 0.357625 8.4:+76446862 MS.gene36610:CDS
AAGGCTAATTACCCTCCTTA+TGG 0.370041 8.4:+76445505 MS.gene36610:CDS
ACGCAGGGCGTGTATGGATT+AGG 0.377710 8.4:+76447175 MS.gene36610:intron
AGCTTGTGAATGAGTCTAAC+AGG 0.386460 8.4:-76447006 None:intergenic
TCAGGGAAGAACCTCCTTCT+TGG 0.388520 8.4:+76446136 MS.gene36610:CDS
AATCTTCAAAAGCAACTTCC+TGG 0.397330 8.4:+76447346 MS.gene36610:CDS
TATCTTAGTCCACAGGCATC+AGG 0.401048 8.4:+76446118 MS.gene36610:CDS
CCTTGAAATATTCTAACTGT+TGG 0.403529 8.4:-76446820 None:intergenic
GTACCAGCTATCATAACATT+TGG 0.405659 8.4:+76445433 MS.gene36610:CDS
GTTGAAACGCAGGGCGTGTA+TGG 0.408582 8.4:+76447169 MS.gene36610:intron
CTTGAAATATTCTAACTGTT+GGG 0.411275 8.4:-76446819 None:intergenic
GGGAAAGGGTGCTGTGGTAC+AGG 0.417817 8.4:+76447676 MS.gene36610:CDS
GTGCAAAGCTACCACAAGTT+AGG 0.425459 8.4:-76445399 None:intergenic
GTGACCTCACTTCCACCATT+GGG 0.427280 8.4:+76447214 MS.gene36610:CDS
AGTGACCTCACTTCCACCAT+TGG 0.432684 8.4:+76447213 MS.gene36610:CDS
TTAGTAAAATCTCTACCATA+AGG 0.435286 8.4:-76445520 None:intergenic
CCAACAGTTAGAATATTTCA+AGG 0.438731 8.4:+76446820 MS.gene36610:CDS
AAAATTATTATACCAATCCT+TGG 0.441731 8.4:+76446945 MS.gene36610:CDS
TTTACTAATAAACAACCTAC+TGG 0.460660 8.4:+76445535 MS.gene36610:CDS
TTATTTGGTTACCATGAGAA+TGG 0.467168 8.4:+76447259 MS.gene36610:CDS
TGGTGCGTACCGAAATTTGA+AGG 0.467861 8.4:-76447424 None:intergenic
TCTTTGTATGTATTGAGTGC+TGG 0.485192 8.4:+76446905 MS.gene36610:CDS
GGCATAGCTCTTATCACATA+AGG 0.485525 8.4:+76447838 MS.gene36610:CDS
TGCATCTGGTTATGATGAAA+AGG 0.486563 8.4:+76446177 MS.gene36610:CDS
GAATATTTCAAGGAATATCA+AGG 0.486768 8.4:+76446830 MS.gene36610:CDS
TCACCAAATGTTATGATAGC+TGG 0.498295 8.4:-76445436 None:intergenic
CCAAATAAAGTCCTTGCAGC+AGG 0.504382 8.4:-76447244 None:intergenic
GCGTGTATGGATTAGGAGCT+AGG 0.512696 8.4:+76447182 MS.gene36610:CDS
AAAGGCTGCATCTATTATCA+AGG 0.521328 8.4:+76446880 MS.gene36610:CDS
CAAGGAATATCAAGGCAAGT+TGG 0.527876 8.4:+76446838 MS.gene36610:CDS
ATATCAAGGCAAGTTGGCTC+AGG 0.531855 8.4:+76446844 MS.gene36610:CDS
TTATGTGATAAGAGCTATGC+CGG 0.533000 8.4:-76447836 None:intergenic
GGTGACTCTGCAGTAGATGT+AGG 0.538565 8.4:+76445454 MS.gene36610:CDS
GCCTGTGGACTAAGATATGC+AGG 0.541888 8.4:-76446112 None:intergenic
TGCTTGGTTGATCCAAGGAT+TGG 0.542337 8.4:-76446957 None:intergenic
ACTGATCAACAGTGATTGCT+TGG 0.542659 8.4:-76446973 None:intergenic
TTGCAATGGCAAGTTAGCTA+CGG 0.548669 8.4:+76445564 MS.gene36610:CDS
GTGATTGCTTGGTTGATCCA+AGG 0.549428 8.4:-76446962 None:intergenic
GTATCTTGCTTCCTAACTTG+TGG 0.552323 8.4:+76445388 MS.gene36610:CDS
AGGTTCTTCCCTGATGCCTG+TGG 0.556382 8.4:-76446127 None:intergenic
TGGGTTGCCTACCTGCTGCA+AGG 0.568781 8.4:+76447233 MS.gene36610:CDS
AAGCAAAGTTAGCACCAAGA+AGG 0.572551 8.4:-76446150 None:intergenic
ACCTGCATATCTTAGTCCAC+AGG 0.573584 8.4:+76446111 MS.gene36610:CDS
ACTTGATTAGCAGCTTCTGA+AGG 0.575330 8.4:-76447790 None:intergenic
TTGCGACACAACCATTCTCA+TGG 0.578404 8.4:-76447270 None:intergenic
GTAAAATCTCTACCATAAGG+AGG 0.579599 8.4:-76445517 None:intergenic
ATCTTAGTCCACAGGCATCA+GGG 0.598385 8.4:+76446119 MS.gene36610:CDS
GGTGCGTACCGAAATTTGAA+GGG 0.600335 8.4:-76447423 None:intergenic
GCAGGTAGGCAACCCAATGG+TGG 0.601772 8.4:-76447226 None:intergenic
TTGTGCAATCCAAAATCACT+AGG 0.603517 8.4:+76447721 MS.gene36610:CDS
CAAAGTTAGCACCAAGAAGG+AGG 0.606423 8.4:-76446147 None:intergenic
TAAAATCTCTACCATAAGGA+GGG 0.614379 8.4:-76445516 None:intergenic
CCATTGCAAAACCTCCCAGT+AGG 0.621346 8.4:-76445550 None:intergenic
TTACTAATAAACAACCTACT+GGG 0.623210 8.4:+76445536 MS.gene36610:CDS
GCAACCCAATGGTGGAAGTG+AGG 0.623756 8.4:-76447218 None:intergenic
AGAATCAACACTGATGCACA+AGG 0.629785 8.4:+76447292 MS.gene36610:CDS
AAAATCACAATCTTTAGACC+AGG 0.647895 8.4:-76447364 None:intergenic
CTAATAAACAACCTACTGGG+AGG 0.651293 8.4:+76445539 MS.gene36610:CDS
GCAGCAGGTAGGCAACCCAA+TGG 0.651520 8.4:-76447229 None:intergenic
GAGGCAGGGAAAGGGTGCTG+TGG 0.662542 8.4:+76447670 MS.gene36610:CDS
ATAAAGTCCTTGCAGCAGGT+AGG 0.698601 8.4:-76447240 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAGTTTTTTTCAATTA+AGG + chr8.4:76446416-76446435 MS.gene36610:intron 10.0%
!! AAAAATTTGATATACTACTT+AGG - chr8.4:76447093-76447112 None:intergenic 15.0%
!! AGTTCAAACATAATATATAT+AGG - chr8.4:76446720-76446739 None:intergenic 15.0%
!! GTTTACAATTAGTTATTAAA+TGG + chr8.4:76446652-76446671 MS.gene36610:intron 15.0%
!! AAAATTATTATACCAATCCT+TGG + chr8.4:76446945-76446964 MS.gene36610:CDS 20.0%
!! ACATATTTCAGTTTATCTAA+TGG - chr8.4:76447119-76447138 None:intergenic 20.0%
!! ACTATTTGAATTAAGCTATA+AGG + chr8.4:76446479-76446498 MS.gene36610:intron 20.0%
!! CTATATAGAACATCATAAAA+AGG - chr8.4:76447642-76447661 None:intergenic 20.0%
!! GTATTGTATCCTTTATTATA+TGG + chr8.4:76445638-76445657 MS.gene36610:intron 20.0%
!! TGCAATAACAAAATCAATTT+AGG - chr8.4:76447480-76447499 None:intergenic 20.0%
!!! ACTAGTTTATAAGTATGAAA+TGG + chr8.4:76446368-76446387 MS.gene36610:intron 20.0%
!!! CTTTTTATGATGTTCTATAT+AGG + chr8.4:76447640-76447659 MS.gene36610:intron 20.0%
!!! TTTTGTTATGAACTTGTTTT+TGG + chr8.4:76446763-76446782 MS.gene36610:intron 20.0%
! AAATGTATCGTAGATTTGAT+TGG + chr8.4:76445799-76445818 MS.gene36610:intron 25.0%
! AACGACTAAGATTTATTTGA+AGG + chr8.4:76445745-76445764 MS.gene36610:intron 25.0%
! AAGCTATAAGTTCAAATATG+TGG + chr8.4:76446512-76446531 MS.gene36610:intron 25.0%
! ACGACTAAGATTTATTTGAA+GGG + chr8.4:76445746-76445765 MS.gene36610:intron 25.0%
! CATATAAGTTTCATTGATGT+TGG + chr8.4:76446043-76446062 MS.gene36610:intron 25.0%
! CTTGAAATATTCTAACTGTT+GGG - chr8.4:76446822-76446841 None:intergenic 25.0%
! GAATATTTCAAGGAATATCA+AGG + chr8.4:76446830-76446849 MS.gene36610:CDS 25.0%
! TATTATCTTGTCCTTATGTT+GGG - chr8.4:76447588-76447607 None:intergenic 25.0%
! TGTTTGAACTTATATCTGTT+TGG + chr8.4:76446730-76446749 MS.gene36610:intron 25.0%
! TTACTAATAAACAACCTACT+GGG + chr8.4:76445536-76445555 MS.gene36610:CDS 25.0%
! TTAGTAAAATCTCTACCATA+AGG - chr8.4:76445523-76445542 None:intergenic 25.0%
! TTATTATCTTGTCCTTATGT+TGG - chr8.4:76447589-76447608 None:intergenic 25.0%
! TTCAAATAAATCTTAGTCGT+TGG - chr8.4:76445746-76445765 None:intergenic 25.0%
! TTTACTAATAAACAACCTAC+TGG + chr8.4:76445535-76445554 MS.gene36610:CDS 25.0%
!!! CCACTTTTATCTCAAATTAA+CGG + chr8.4:76447444-76447463 MS.gene36610:intron 25.0%
!!! GTAGAGTTTTGTAAAATTAG+CGG + chr8.4:76446341-76446360 MS.gene36610:intron 25.0%
!!! TAATTAGCCTTAAAAAGAGT+AGG - chr8.4:76445496-76445515 None:intergenic 25.0%
!!! TTTTTCAATTAAGGCTACAA+GGG + chr8.4:76446425-76446444 MS.gene36610:intron 25.0%
!!! TTTTTTCAATTAAGGCTACA+AGG + chr8.4:76446424-76446443 MS.gene36610:intron 25.0%
AAAATCACAATCTTTAGACC+AGG - chr8.4:76447367-76447386 None:intergenic 30.0%
ACATTGAGATTTCAATGAAG+AGG - chr8.4:76445673-76445692 None:intergenic 30.0%
CATAAGGACAAGATAATAAC+TGG + chr8.4:76447590-76447609 MS.gene36610:intron 30.0%
CATGGAAGACCATATAATAA+AGG - chr8.4:76445650-76445669 None:intergenic 30.0%
CCAACAGTTAGAATATTTCA+AGG + chr8.4:76446820-76446839 MS.gene36610:CDS 30.0%
CCACTATAAGCTAACTTATT+AGG - chr8.4:76446285-76446304 None:intergenic 30.0%
CCTTGAAATATTCTAACTGT+TGG - chr8.4:76446823-76446842 None:intergenic 30.0%
CGACTAAGATTTATTTGAAG+GGG + chr8.4:76445747-76445766 MS.gene36610:intron 30.0%
CTTCATTGAAATCTCAATGT+TGG + chr8.4:76445673-76445692 MS.gene36610:intron 30.0%
GAATTAAGCTATAAGGCATA+AGG + chr8.4:76446486-76446505 MS.gene36610:intron 30.0%
GCTGATAACTTAATTATTGC+CGG + chr8.4:76447817-76447836 MS.gene36610:CDS 30.0%
GCTTTCTTTCTTAAATCTAG+TGG + chr8.4:76445935-76445954 MS.gene36610:intron 30.0%
GTTCAAAACCCTTCAAATTT+CGG + chr8.4:76447415-76447434 MS.gene36610:CDS 30.0%
TAAAATCTCTACCATAAGGA+GGG - chr8.4:76445519-76445538 None:intergenic 30.0%
TAAGATTTATTTGAAGGGGA+TGG + chr8.4:76445751-76445770 MS.gene36610:intron 30.0%
TAATATGAACTGTCTGATCT+TGG + chr8.4:76447500-76447519 MS.gene36610:intron 30.0%
TATTCTAACTGTTGGGATAA+TGG - chr8.4:76446815-76446834 None:intergenic 30.0%
TCAACAAAGAACCAACATTA+GGG - chr8.4:76447154-76447173 None:intergenic 30.0%
TTATTTGGTTACCATGAGAA+TGG + chr8.4:76447259-76447278 MS.gene36610:CDS 30.0%
TTCAACAAAGAACCAACATT+AGG - chr8.4:76447155-76447174 None:intergenic 30.0%
! AAATCAATTTAGGATGACCT+CGG - chr8.4:76447470-76447489 None:intergenic 30.0%
! CCGTTAATTTGAGATAAAAG+TGG - chr8.4:76447447-76447466 None:intergenic 30.0%
! CCTAATAAGTTAGCTTATAG+TGG + chr8.4:76446282-76446301 MS.gene36610:intron 30.0%
! TTACCTTCCTACTCTTTTTA+AGG + chr8.4:76445486-76445505 MS.gene36610:CDS 30.0%
!! CTCATTCACAAGCTTTATTA+AGG + chr8.4:76447015-76447034 MS.gene36610:CDS 30.0%
!! TCAATGTTGGTTTAACCTAA+CGG + chr8.4:76445686-76445705 MS.gene36610:intron 30.0%
!!! AATTTGAAGGGTTTTGAACA+AGG - chr8.4:76447414-76447433 None:intergenic 30.0%
!!! TGTTTTTGGTTTCTTCCTAT+TGG + chr8.4:76446777-76446796 MS.gene36610:intron 30.0%
AAAGGCTGCATCTATTATCA+AGG + chr8.4:76446880-76446899 MS.gene36610:CDS 35.0%
AATCTTCAAAAGCAACTTCC+TGG + chr8.4:76447346-76447365 MS.gene36610:CDS 35.0%
AATGCAAACAACCCTAATGT+TGG + chr8.4:76447140-76447159 MS.gene36610:intron 35.0%
ACGATACATTTCCACAAGAT+TGG - chr8.4:76445858-76445839 None:intergenic 35.0%
AGGAGAAATCAAGTTACTAG+AGG - chr8.4:76446700-76446719 None:intergenic 35.0%
AGTTTCAATAAGGGTCAGTT+TGG - chr8.4:76446542-76446561 None:intergenic 35.0%
CGATACATTTCCACAAGATT+TGG + chr8.4:76445840-76445859 MS.gene36610:intron 35.0%
GAATTGAAATATCAGCCGTT+AGG - chr8.4:76445704-76445723 None:intergenic 35.0%
GCGTATCTCTCTAAATGTAA+CGG - chr8.4:76445917-76445936 None:intergenic 35.0%
GTAAAATCTCTACCATAAGG+AGG - chr8.4:76445520-76445539 None:intergenic 35.0%
GTACCAGCTATCATAACATT+TGG + chr8.4:76445433-76445452 MS.gene36610:CDS 35.0%
GTGGAAATGTATCGTAGATT+TGG - chr8.4:76445814-76445795 None:intergenic 35.0%
TCACCAAATGTTATGATAGC+TGG - chr8.4:76445439-76445458 None:intergenic 35.0%
TCTTTGTATGTATTGAGTGC+TGG + chr8.4:76446905-76446924 MS.gene36610:CDS 35.0%
TGCATCTGGTTATGATGAAA+AGG + chr8.4:76446177-76446196 MS.gene36610:CDS 35.0%
TTATGTGATAAGAGCTATGC+CGG - chr8.4:76447839-76447858 None:intergenic 35.0%
TTGTGCAATCCAAAATCACT+AGG + chr8.4:76447721-76447740 MS.gene36610:CDS 35.0%
TTTATTTGAAGGGGATGGAA+AGG + chr8.4:76445756-76445775 MS.gene36610:intron 35.0%
! AAGATTTGGTTGAATGGACT+TGG + chr8.4:76445854-76445873 MS.gene36610:intron 35.0%
! AAGTTAGCTACGGATTTTAC+AGG + chr8.4:76445574-76445593 MS.gene36610:CDS 35.0%
! ACGGCTTGATAGTTTCAATA+AGG - chr8.4:76446552-76446571 None:intergenic 35.0%
! ATGCAACTCAGTATGTGTTT+TGG + chr8.4:76447755-76447774 MS.gene36610:CDS 35.0%
! CGGCTTGATAGTTTCAATAA+GGG - chr8.4:76446551-76446570 None:intergenic 35.0%
! GAACAAGTTCCTAGTGATTT+TGG - chr8.4:76447733-76447752 None:intergenic 35.0%
! GATCCTCTTCATCTGAAATA+CGG - chr8.4:76445978-76445997 None:intergenic 35.0%
! GTTCTATATAGGTTTTGCTG+AGG + chr8.4:76447651-76447670 MS.gene36610:intron 35.0%
! TAGCCTTAAAAAGAGTAGGA+AGG - chr8.4:76445492-76445511 None:intergenic 35.0%
! TGCAACTCAGTATGTGTTTT+GGG + chr8.4:76447756-76447775 MS.gene36610:CDS 35.0%
! TTCCACAAGATTTGGTTGAA+TGG + chr8.4:76445848-76445867 MS.gene36610:intron 35.0%
! TTTTGAACAAGGTCAAAGAG+AGG - chr8.4:76447403-76447422 None:intergenic 35.0%
!!! AATGTTTTTTCTCCACTGCA+CGG + chr8.4:76447553-76447572 MS.gene36610:intron 35.0%
AAGCAAAGTTAGCACCAAGA+AGG - chr8.4:76446153-76446172 None:intergenic 40.0%
AAGGCTAATTACCCTCCTTA+TGG + chr8.4:76445505-76445524 MS.gene36610:CDS 40.0%
ACTGATCAACAGTGATTGCT+TGG - chr8.4:76446976-76446995 None:intergenic 40.0%
ACTTGATTAGCAGCTTCTGA+AGG - chr8.4:76447793-76447812 None:intergenic 40.0%
AGAATCAACACTGATGCACA+AGG + chr8.4:76447292-76447311 MS.gene36610:CDS 40.0%
AGCTTGTGAATGAGTCTAAC+AGG - chr8.4:76447009-76447028 None:intergenic 40.0%
CAAGGAATATCAAGGCAAGT+TGG + chr8.4:76446838-76446857 MS.gene36610:CDS 40.0%
CATTTCCACAAGATTGGACT+TGG - chr8.4:76445784-76445803 None:intergenic 40.0%
CTAATAAACAACCTACTGGG+AGG + chr8.4:76445539-76445558 MS.gene36610:CDS 40.0%
GACGTTATTTAAGTCGTGCT+TGG + chr8.4:76446243-76446262 MS.gene36610:intron 40.0%
GAGATTTCAATGAAGAGGCA+TGG - chr8.4:76445668-76445687 None:intergenic 40.0%
GGATTAGGAGCTAGGAAAAT+TGG + chr8.4:76447190-76447209 MS.gene36610:CDS 40.0%
GTATCTTGCTTCCTAACTTG+TGG + chr8.4:76445388-76445407 MS.gene36610:CDS 40.0%
GTCCATTCAACCAAATCTTG+TGG - chr8.4:76445853-76445872 None:intergenic 40.0%
TGGTTCTTTGTTGAAACGCA+GGG + chr8.4:76447160-76447179 MS.gene36610:intron 40.0%
TTATCTCAAATTAACGGCCG+AGG + chr8.4:76447450-76447469 MS.gene36610:intron 40.0%
TTGCAATGGCAAGTTAGCTA+CGG + chr8.4:76445564-76445583 MS.gene36610:CDS 40.0%
! ATATAGGTTTTGCTGAGGCA+GGG + chr8.4:76447656-76447675 MS.gene36610:intron 40.0%
! CTTTTGCAGCTGAAACACTT+GGG + chr8.4:76446074-76446093 MS.gene36610:intron 40.0%
! TATATAGGTTTTGCTGAGGC+AGG + chr8.4:76447655-76447674 MS.gene36610:intron 40.0%
! TCTTTTGCAGCTGAAACACT+TGG + chr8.4:76446073-76446092 MS.gene36610:intron 40.0%
! TTGGTTCTTTGTTGAAACGC+AGG + chr8.4:76447159-76447178 MS.gene36610:intron 40.0%
!! AAATACGGTGCTACAGCAAT+AGG - chr8.4:76445963-76445982 None:intergenic 40.0%
!! AATACGGTGCTACAGCAATA+GGG - chr8.4:76445962-76445981 None:intergenic 40.0%
!! TATAGTGGATGAGCTGATAG+CGG + chr8.4:76446297-76446316 MS.gene36610:intron 40.0%
AACTTTGCTTCAGCTGCATC+TGG + chr8.4:76446163-76446182 MS.gene36610:CDS 45.0%
ACCTGCATATCTTAGTCCAC+AGG + chr8.4:76446111-76446130 MS.gene36610:CDS 45.0%
AGGATCCAAGTCCAATCTTG+TGG + chr8.4:76445776-76445795 MS.gene36610:intron 45.0%
ATAAAGTCCTTGCAGCAGGT+AGG - chr8.4:76447243-76447262 None:intergenic 45.0%
ATCCAAGTCCTACCTAAGGT+TGG + chr8.4:76445995-76446014 MS.gene36610:intron 45.0%
ATCTTAGTCCACAGGCATCA+GGG + chr8.4:76446119-76446138 MS.gene36610:CDS 45.0%
CAAAGTTAGCACCAAGAAGG+AGG - chr8.4:76446150-76446169 None:intergenic 45.0%
CATCTACTCCAACCTTAGGT+AGG - chr8.4:76446006-76446025 None:intergenic 45.0%
CCAAATAAAGTCCTTGCAGC+AGG - chr8.4:76447247-76447266 None:intergenic 45.0%
CCTGCTGCAAGGACTTTATT+TGG + chr8.4:76447244-76447263 MS.gene36610:CDS 45.0%
GCAACATCTACTCCAACCTT+AGG - chr8.4:76446010-76446029 None:intergenic 45.0%
GCACCGTATTTCAGATGAAG+AGG + chr8.4:76445972-76445991 MS.gene36610:intron 45.0%
GGTATTCGGATCCCAACATA+AGG + chr8.4:76447574-76447593 MS.gene36610:intron 45.0%
GGTGCGTACCGAAATTTGAA+GGG - chr8.4:76447426-76447445 None:intergenic 45.0%
GTGATTGCTTGGTTGATCCA+AGG - chr8.4:76446965-76446984 None:intergenic 45.0%
GTGCAAAGCTACCACAAGTT+AGG - chr8.4:76445402-76445421 None:intergenic 45.0%
TAACAACGCTGCTGGTATAG+AGG - chr8.4:76445882-76445901 None:intergenic 45.0%
TATCTTAGTCCACAGGCATC+AGG + chr8.4:76446118-76446137 MS.gene36610:CDS 45.0%
TGCTTGGTTGATCCAAGGAT+TGG - chr8.4:76446960-76446979 None:intergenic 45.0%
TGGAATTGCATGCTGCCAAT+AGG - chr8.4:76446795-76446814 None:intergenic 45.0%
TGGTGCGTACCGAAATTTGA+AGG - chr8.4:76447427-76447446 None:intergenic 45.0%
TTGCGACACAACCATTCTCA+TGG - chr8.4:76447273-76447292 None:intergenic 45.0%
TTTCTCCACTGCACGGTATT+CGG + chr8.4:76447560-76447579 MS.gene36610:intron 45.0%
! ATATCAAGGCAAGTTGGCTC+AGG + chr8.4:76446844-76446863 MS.gene36610:CDS 45.0%
! TCAGGTTGCTGGCAGTAAAA+AGG + chr8.4:76446862-76446881 MS.gene36610:CDS 45.0%
! TTACGCGCAGTTTTCGATCT+CGG - chr8.4:76447534-76447553 None:intergenic 45.0%
!!! AATTTTCAAAAAAATTAAAA+CGG - chr8.4:76446571-76446590 None:intergenic 5.0%
AGCAGCGTTGTTACAGCTGT+AGG + chr8.4:76445889-76445908 MS.gene36610:intron 50.0%
AGTGACCTCACTTCCACCAT+TGG + chr8.4:76447213-76447232 MS.gene36610:CDS 50.0%
CCATTGCAAAACCTCCCAGT+AGG - chr8.4:76445553-76445572 None:intergenic 50.0%
CTCCAACCTTAGGTAGGACT+TGG - chr8.4:76446000-76446019 None:intergenic 50.0%
GAGGATCCAAGTCCTACCTA+AGG + chr8.4:76445991-76446010 MS.gene36610:intron 50.0%
GGTGACTCTGCAGTAGATGT+AGG + chr8.4:76445454-76445473 MS.gene36610:CDS 50.0%
GTGACCTCACTTCCACCATT+GGG + chr8.4:76447214-76447233 MS.gene36610:CDS 50.0%
TACAGCTGTAACAACGCTGC+TGG - chr8.4:76445890-76445909 None:intergenic 50.0%
TCAGGGAAGAACCTCCTTCT+TGG + chr8.4:76446136-76446155 MS.gene36610:CDS 50.0%
! CCTACTGGGAGGTTTTGCAA+TGG + chr8.4:76445550-76445569 MS.gene36610:CDS 50.0%
! GCCTGTGGACTAAGATATGC+AGG - chr8.4:76446115-76446134 None:intergenic 50.0%
! GTTTTGCTGAGGCAGGGAAA+GGG + chr8.4:76447662-76447681 MS.gene36610:CDS 50.0%
!! GCGTGTATGGATTAGGAGCT+AGG + chr8.4:76447182-76447201 MS.gene36610:CDS 50.0%
ACGCAGGGCGTGTATGGATT+AGG + chr8.4:76447175-76447194 MS.gene36610:intron 55.0%
AGGTTCTTCCCTGATGCCTG+TGG - chr8.4:76446130-76446149 None:intergenic 55.0%
GTTGAAACGCAGGGCGTGTA+TGG + chr8.4:76447169-76447188 MS.gene36610:intron 55.0%
! GCAACCCAATGGTGGAAGTG+AGG - chr8.4:76447221-76447240 None:intergenic 55.0%
! GGTTTTGCTGAGGCAGGGAA+AGG + chr8.4:76447661-76447680 MS.gene36610:intron 55.0%
GCAGCAGGTAGGCAACCCAA+TGG - chr8.4:76447232-76447251 None:intergenic 60.0%
GCAGGTAGGCAACCCAATGG+TGG - chr8.4:76447229-76447248 None:intergenic 60.0%
GGGATCCGAATACCGTGCAG+TGG - chr8.4:76447568-76447587 None:intergenic 60.0%
TGGGTTGCCTACCTGCTGCA+AGG + chr8.4:76447233-76447252 MS.gene36610:CDS 60.0%
! GGCAAGTTGGCTCAGGTTGC+TGG + chr8.4:76446851-76446870 MS.gene36610:CDS 60.0%
!! GGGAAAGGGTGCTGTGGTAC+AGG + chr8.4:76447676-76447695 MS.gene36610:CDS 60.0%
!! GAGGCAGGGAAAGGGTGCTG+TGG + chr8.4:76447670-76447689 MS.gene36610:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 76445346 76447858 76445346 ID=MS.gene36610
chr8.4 mRNA 76445346 76447858 76445346 ID=MS.gene36610.t1;Parent=MS.gene36610
chr8.4 exon 76445346 76445595 76445346 ID=MS.gene36610.t1.exon1;Parent=MS.gene36610.t1
chr8.4 CDS 76445346 76445595 76445346 ID=cds.MS.gene36610.t1;Parent=MS.gene36610.t1
chr8.4 exon 76446083 76446213 76446083 ID=MS.gene36610.t1.exon2;Parent=MS.gene36610.t1
chr8.4 CDS 76446083 76446213 76446083 ID=cds.MS.gene36610.t1;Parent=MS.gene36610.t1
chr8.4 exon 76446803 76447036 76446803 ID=MS.gene36610.t1.exon3;Parent=MS.gene36610.t1
chr8.4 CDS 76446803 76447036 76446803 ID=cds.MS.gene36610.t1;Parent=MS.gene36610.t1
chr8.4 exon 76447181 76447436 76447181 ID=MS.gene36610.t1.exon4;Parent=MS.gene36610.t1
chr8.4 CDS 76447181 76447436 76447181 ID=cds.MS.gene36610.t1;Parent=MS.gene36610.t1
chr8.4 exon 76447662 76447858 76447662 ID=MS.gene36610.t1.exon5;Parent=MS.gene36610.t1
chr8.4 CDS 76447662 76447858 76447662 ID=cds.MS.gene36610.t1;Parent=MS.gene36610.t1
Gene Sequence

>MS.gene36610

ATGATGAACATGAATAGCAAAGTAACACTTGTTCTACTCATAGTATCTTGCTTCCTAACTTGTGGTAGCTTTGCACAAGATACACTTGTACCAGCTATCATAACATTTGGTGACTCTGCAGTAGATGTAGGAAATAATGATTACCTTCCTACTCTTTTTAAGGCTAATTACCCTCCTTATGGTAGAGATTTTACTAATAAACAACCTACTGGGAGGTTTTGCAATGGCAAGTTAGCTACGGATTTTACAGGTAAATATTGCATCAAACTAATTAGATATTGTGTTTATTGTTGTATTGTATCCTTTATTATATGGTCTTCCATGCCTCTTCATTGAAATCTCAATGTTGGTTTAACCTAACGGCTGATATTTCAATTCTCTCAGCTATTAGATTAATCCAACGACTAAGATTTATTTGAAGGGGATGGAAAGGATCCAAGTCCAATCTTGTGGAAATGTATCGTAGATTTGATTGGATTACACTACCAAATCTACGATACATTTCCACAAGATTTGGTTGAATGGACTTGGATCCTCTATACCAGCAGCGTTGTTACAGCTGTAGGAACCGTTACATTTAGAGAGATACGCTTTCTTTCTTAAATCTAGTGGTCCCTATTGCTGTAGCACCGTATTTCAGATGAAGAGGATCCAAGTCCTACCTAAGGTTGGAGTAGATGTTGCACATATACTCACGCATATAAGTTTCATTGATGTTGGAATGTTTTCTTTTGCAGCTGAAACACTTGGGTTTACGAGTTTTGCACCTGCATATCTTAGTCCACAGGCATCAGGGAAGAACCTCCTTCTTGGTGCTAACTTTGCTTCAGCTGCATCTGGTTATGATGAAAAGGCTGCTACGTTGAATGTAAGTTTGTGATTACAATATATTCATTTGACGTTATTTAAGTCGTGCTTGGTAAAAAATAGTGAATACCTAATAAGTTAGCTTATAGTGGATGAGCTGATAGCGGATAAGCTAATTGATTAAGTTTGTAGAGTTTTGTAAAATTAGCGGTTGAACTAGTTTATAAGTATGAAATGGCATAAATAAGATATATTTATTTTATAATTTAGTTTTTTTCAATTAAGGCTACAAGGGTAAAATTGAAATAAAAAATGATAAACAATAAACTATTTGAATTAAGCTATAAGGCATAAGGCATAAGCTATAAGTTCAAATATGTGGCTTGCCAAACTGACCCTTATTGAAACTATCAAGCCGTTTTAATTTTTTTGAAAATTTGTGTAGTTTATCTATTCAATTAGAAGTTTTTGTTTGACAGTAAGATCGACGAAATCTATTGTTTACAATTAGTTATTAAATGGAGTAACTCAGTTTAAATTTACTCCTCTAGTAACTTGATTTCTCCTATATATATTATGTTTGAACTTATATCTGTTTGGAATGAAAATGTTTTGTTATGAACTTGTTTTTGGTTTCTTCCTATTGGCAGCATGCAATTCCATTATCCCAACAGTTAGAATATTTCAAGGAATATCAAGGCAAGTTGGCTCAGGTTGCTGGCAGTAAAAAGGCTGCATCTATTATCAAGGATTCTTTGTATGTATTGAGTGCTGGCAGCAGTGACTTTGTACAAAATTATTATACCAATCCTTGGATCAACCAAGCAATCACTGTTGATCAGTATTCATCTTACCTGTTAGACTCATTCACAAGCTTTATTAAGGTATTCTGTTATTGCTATTCGTAGAAAACTCATAAGCGCTTTTCATAATCTCTCCTAAGTAGTATATCAAATTTTTATACCATTAGATAAACTGAAATATGTTAATGCAAACAACCCTAATGTTGGTTCTTTGTTGAAACGCAGGGCGTGTATGGATTAGGAGCTAGGAAAATTGGAGTGACCTCACTTCCACCATTGGGTTGCCTACCTGCTGCAAGGACTTTATTTGGTTACCATGAGAATGGTTGTGTCGCAAGAATCAACACTGATGCACAAGGATTTAACAAGAAAGTCAGCTCAGCTGCATCGAATCTTCAAAAGCAACTTCCTGGTCTAAAGATTGTGATTTTTGATATATACAAACCTCTCTTTGACCTTGTTCAAAACCCTTCAAATTTCGGTACGCACCACTTTTATCTCAAATTAACGGCCGAGGTCATCCTAAATTGATTTTGTTATTGCATAATATGAACTGTCTGATCTTGGATTAGCAGCCGAGATCGAAAACTGCGCGTAAATGTTTTTTCTCCACTGCACGGTATTCGGATCCCAACATAAGGACAAGATAATAACTGGAATTATAATGATTTTTTTTTTTTTAACCTTTTTATGATGTTCTATATAGGTTTTGCTGAGGCAGGGAAAGGGTGCTGTGGTACAGGTCTTGTAGAAACAACATCATTATTGTGCAATCCAAAATCACTAGGAACTTGTTCTAATGCAACTCAGTATGTGTTTTGGGACAGTGTTCATCCTTCAGAAGCTGCTAATCAAGTTCTAGCTGATAACTTAATTATTGCCGGCATAGCTCTTATCACATAA

Protein sequence

>MS.gene36610.t1

MMNMNSKVTLVLLIVSCFLTCGSFAQDTLVPAIITFGDSAVDVGNNDYLPTLFKANYPPYGRDFTNKQPTGRFCNGKLATDFTAETLGFTSFAPAYLSPQASGKNLLLGANFASAASGYDEKAATLNHAIPLSQQLEYFKEYQGKLAQVAGSKKAASIIKDSLYVLSAGSSDFVQNYYTNPWINQAITVDQYSSYLLDSFTSFIKGVYGLGARKIGVTSLPPLGCLPAARTLFGYHENGCVARINTDAQGFNKKVSSAASNLQKQLPGLKIVIFDIYKPLFDLVQNPSNFGFAEAGKGCCGTGLVETTSLLCNPKSLGTCSNATQYVFWDSVHPSEAANQVLADNLIIAGIALIT