Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074599.t1 | XP_013457053.1 | 83.8 | 656 | 81 | 2 | 3 | 633 | 154 | 809 | 6.60E-296 | 1026.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074599.t1 | P73625 | 28.3 | 607 | 299 | 11 | 76 | 626 | 193 | 719 | 2.5e-54 | 214.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074599.t1 | G7ZZ93 | 83.8 | 656 | 81 | 2 | 3 | 633 | 154 | 809 | 4.8e-296 | 1026.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene074599 | 0.820504 | 6.62E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene074599 | 0.817619 | 3.00E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene074599 | 0.8011 | 1.06E-48 | -1.69E-46 |
| MS.gene049351 | MS.gene074599 | 0.812543 | 4.02E-51 | -1.69E-46 |
| MS.gene049356 | MS.gene074599 | 0.830778 | 2.42E-55 | -1.69E-46 |
| MS.gene049369 | MS.gene074599 | 0.825753 | 3.95E-54 | -1.69E-46 |
| MS.gene049427 | MS.gene074599 | 0.846538 | 2.04E-59 | -1.69E-46 |
| MS.gene049488 | MS.gene074599 | 0.80616 | 9.42E-50 | -1.69E-46 |
| MS.gene049491 | MS.gene074599 | 0.838726 | 2.42E-57 | -1.69E-46 |
| MS.gene049609 | MS.gene074599 | 0.839589 | 1.45E-57 | -1.69E-46 |
| MS.gene049661 | MS.gene074599 | 0.81922 | 1.30E-52 | -1.69E-46 |
| MS.gene049662 | MS.gene074599 | 0.808445 | 3.09E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene074599 | 0.855587 | 5.71E-62 | -1.69E-46 |
| MS.gene050076 | MS.gene074599 | 0.811616 | 6.40E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene074599 | 0.836664 | 8.20E-57 | -1.69E-46 |
| MS.gene050397 | MS.gene074599 | 0.821932 | 3.10E-53 | -1.69E-46 |
| MS.gene050432 | MS.gene074599 | 0.857327 | 1.76E-62 | -1.69E-46 |
| MS.gene050529 | MS.gene074599 | 0.804495 | 2.10E-49 | -1.69E-46 |
| MS.gene050538 | MS.gene074599 | 0.804928 | 1.71E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene074599 | 0.842407 | 2.64E-58 | -1.69E-46 |
| MS.gene050625 | MS.gene074599 | 0.830661 | 2.59E-55 | -1.69E-46 |
| MS.gene050670 | MS.gene074599 | 0.866901 | 2.03E-65 | -1.69E-46 |
| MS.gene050686 | MS.gene074599 | 0.800147 | 1.65E-48 | -1.69E-46 |
| MS.gene050747 | MS.gene074599 | 0.821774 | 3.38E-53 | -1.69E-46 |
| MS.gene050772 | MS.gene074599 | 0.836249 | 1.05E-56 | -1.69E-46 |
| MS.gene050812 | MS.gene074599 | 0.809056 | 2.29E-50 | -1.69E-46 |
| MS.gene05081 | MS.gene074599 | 0.816703 | 4.82E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene074599 | 0.813555 | 2.41E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene074599 | 0.808669 | 2.76E-50 | -1.69E-46 |
| MS.gene05105 | MS.gene074599 | 0.878906 | 1.92E-69 | -1.69E-46 |
| MS.gene051255 | MS.gene074599 | 0.802451 | 5.57E-49 | -1.69E-46 |
| MS.gene051360 | MS.gene074599 | 0.842946 | 1.89E-58 | -1.69E-46 |
| MS.gene051387 | MS.gene074599 | 0.858849 | 6.21E-63 | -1.69E-46 |
| MS.gene051525 | MS.gene074599 | 0.819889 | 9.16E-53 | -1.69E-46 |
| MS.gene051582 | MS.gene074599 | 0.819589 | 1.07E-52 | -1.69E-46 |
| MS.gene051666 | MS.gene074599 | 0.847619 | 1.03E-59 | -1.69E-46 |
| MS.gene051692 | MS.gene074599 | 0.862574 | 4.60E-64 | -1.69E-46 |
| MS.gene051694 | MS.gene074599 | 0.807321 | 5.35E-50 | -1.69E-46 |
| MS.gene051734 | MS.gene074599 | 0.813163 | 2.94E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene074599 | 0.841517 | 4.53E-58 | -1.69E-46 |
| MS.gene051877 | MS.gene074599 | 0.816627 | 5.02E-52 | -1.69E-46 |
| MS.gene052078 | MS.gene074599 | 0.811391 | 7.17E-51 | -1.69E-46 |
| MS.gene052135 | MS.gene074599 | 0.802839 | 4.64E-49 | -1.69E-46 |
| MS.gene052136 | MS.gene074599 | 0.816948 | 4.25E-52 | -1.69E-46 |
| MS.gene052188 | MS.gene074599 | 0.868274 | 7.37E-66 | -1.69E-46 |
| MS.gene052253 | MS.gene074599 | 0.857653 | 1.41E-62 | -1.69E-46 |
| MS.gene052271 | MS.gene074599 | 0.805746 | 1.15E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene074599 | 0.853556 | 2.21E-61 | -1.69E-46 |
| MS.gene052322 | MS.gene074599 | 0.852975 | 3.24E-61 | -1.69E-46 |
| MS.gene052340 | MS.gene074599 | 0.844674 | 6.53E-59 | -1.69E-46 |
| MS.gene052379 | MS.gene074599 | 0.8175 | 3.19E-52 | -1.69E-46 |
| MS.gene052414 | MS.gene074599 | 0.826589 | 2.50E-54 | -1.69E-46 |
| MS.gene052421 | MS.gene074599 | 0.838057 | 3.61E-57 | -1.69E-46 |
| MS.gene052481 | MS.gene074599 | 0.942687 | 4.62E-102 | -1.69E-46 |
| MS.gene052484 | MS.gene074599 | 0.965169 | 2.95E-124 | -1.69E-46 |
| MS.gene052485 | MS.gene074599 | 0.930204 | 2.30E-93 | -1.69E-46 |
| MS.gene052501 | MS.gene074599 | 0.814392 | 1.58E-51 | -1.69E-46 |
| MS.gene052505 | MS.gene074599 | 0.812527 | 4.05E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene074599 | 0.83011 | 3.53E-55 | -1.69E-46 |
| MS.gene052982 | MS.gene074599 | 0.839223 | 1.80E-57 | -1.69E-46 |
| MS.gene053103 | MS.gene074599 | 0.857552 | 1.51E-62 | -1.69E-46 |
| MS.gene053104 | MS.gene074599 | 0.840812 | 6.94E-58 | -1.69E-46 |
| MS.gene053107 | MS.gene074599 | 0.80102 | 1.10E-48 | -1.69E-46 |
| MS.gene053207 | MS.gene074599 | 0.834249 | 3.34E-56 | -1.69E-46 |
| MS.gene053209 | MS.gene074599 | 0.858796 | 6.44E-63 | -1.69E-46 |
| MS.gene053213 | MS.gene074599 | 0.812638 | 3.83E-51 | -1.69E-46 |
| MS.gene053322 | MS.gene074599 | 0.828812 | 7.30E-55 | -1.69E-46 |
| MS.gene053449 | MS.gene074599 | 0.866652 | 2.44E-65 | -1.69E-46 |
| MS.gene053574 | MS.gene074599 | 0.809877 | 1.52E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene074599 | 0.81115 | 8.08E-51 | -1.69E-46 |
| MS.gene053758 | MS.gene074599 | 0.801827 | 7.49E-49 | -1.69E-46 |
| MS.gene053813 | MS.gene074599 | 0.821317 | 4.31E-53 | -1.69E-46 |
| MS.gene053912 | MS.gene074599 | 0.817663 | 2.93E-52 | -1.69E-46 |
| MS.gene054123 | MS.gene074599 | 0.80219 | 6.31E-49 | -1.69E-46 |
| MS.gene054600 | MS.gene074599 | 0.811824 | 5.77E-51 | -1.69E-46 |
| MS.gene054927 | MS.gene074599 | 0.805722 | 1.16E-49 | -1.69E-46 |
| MS.gene054955 | MS.gene074599 | 0.805557 | 1.26E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene074599 | 0.840612 | 7.83E-58 | -1.69E-46 |
| MS.gene055116 | MS.gene074599 | 0.854837 | 9.44E-62 | -1.69E-46 |
| MS.gene055206 | MS.gene074599 | 0.861312 | 1.12E-63 | -1.69E-46 |
| MS.gene055277 | MS.gene074599 | 0.820706 | 5.95E-53 | -1.69E-46 |
| MS.gene055289 | MS.gene074599 | 0.825916 | 3.61E-54 | -1.69E-46 |
| MS.gene055412 | MS.gene074599 | 0.833668 | 4.67E-56 | -1.69E-46 |
| MS.gene055422 | MS.gene074599 | 0.8014 | 9.17E-49 | -1.69E-46 |
| MS.gene055428 | MS.gene074599 | 0.801742 | 7.80E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene074599 | 0.813193 | 2.90E-51 | -1.69E-46 |
| MS.gene055647 | MS.gene074599 | 0.8129 | 3.36E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene074599 | 0.843191 | 1.63E-58 | -1.69E-46 |
| MS.gene055909 | MS.gene074599 | 0.808161 | 3.55E-50 | -1.69E-46 |
| MS.gene055911 | MS.gene074599 | 0.819099 | 1.39E-52 | -1.69E-46 |
| MS.gene05592 | MS.gene074599 | 0.842373 | 2.69E-58 | -1.69E-46 |
| MS.gene055941 | MS.gene074599 | 0.821524 | 3.86E-53 | -1.69E-46 |
| MS.gene056166 | MS.gene074599 | 0.814241 | 1.70E-51 | -1.69E-46 |
| MS.gene056191 | MS.gene074599 | 0.838559 | 2.68E-57 | -1.69E-46 |
| MS.gene056374 | MS.gene074599 | 0.801442 | 8.99E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene074599 | 0.829863 | 4.06E-55 | -1.69E-46 |
| MS.gene056410 | MS.gene074599 | 0.843135 | 1.69E-58 | -1.69E-46 |
| MS.gene056422 | MS.gene074599 | 0.831664 | 1.47E-55 | -1.69E-46 |
| MS.gene056448 | MS.gene074599 | 0.804567 | 2.03E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene074599 | 0.857305 | 1.79E-62 | -1.69E-46 |
| MS.gene056609 | MS.gene074599 | 0.821426 | 4.06E-53 | -1.69E-46 |
| MS.gene056659 | MS.gene074599 | 0.804492 | 2.10E-49 | -1.69E-46 |
| MS.gene056796 | MS.gene074599 | 0.840755 | 7.18E-58 | -1.69E-46 |
| MS.gene056897 | MS.gene074599 | 0.82856 | 8.40E-55 | -1.69E-46 |
| MS.gene057011 | MS.gene074599 | 0.831328 | 1.78E-55 | -1.69E-46 |
| MS.gene05702 | MS.gene074599 | 0.821903 | 3.15E-53 | -1.69E-46 |
| MS.gene057076 | MS.gene074599 | 0.82621 | 3.07E-54 | -1.69E-46 |
| MS.gene057123 | MS.gene074599 | 0.813237 | 2.83E-51 | -1.69E-46 |
| MS.gene057124 | MS.gene074599 | 0.857871 | 1.22E-62 | -1.69E-46 |
| MS.gene057129 | MS.gene074599 | 0.83106 | 2.07E-55 | -1.69E-46 |
| MS.gene057146 | MS.gene074599 | 0.854203 | 1.44E-61 | -1.69E-46 |
| MS.gene057331 | MS.gene074599 | 0.824907 | 6.26E-54 | -1.69E-46 |
| MS.gene05733 | MS.gene074599 | 0.814379 | 1.59E-51 | -1.69E-46 |
| MS.gene05735 | MS.gene074599 | 0.804204 | 2.42E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene074599 | 0.83828 | 3.16E-57 | -1.69E-46 |
| MS.gene057448 | MS.gene074599 | 0.83412 | 3.60E-56 | -1.69E-46 |
| MS.gene057449 | MS.gene074599 | 0.823128 | 1.64E-53 | -1.69E-46 |
| MS.gene057450 | MS.gene074599 | 0.835484 | 1.63E-56 | -1.69E-46 |
| MS.gene057734 | MS.gene074599 | 0.816391 | 5.66E-52 | -1.69E-46 |
| MS.gene057749 | MS.gene074599 | 0.854036 | 1.61E-61 | -1.69E-46 |
| MS.gene057823 | MS.gene074599 | 0.865075 | 7.68E-65 | -1.69E-46 |
| MS.gene057856 | MS.gene074599 | 0.811387 | 7.18E-51 | -1.69E-46 |
| MS.gene057926 | MS.gene074599 | 0.804685 | 1.92E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene074599 | 0.825744 | 3.97E-54 | -1.69E-46 |
| MS.gene058006 | MS.gene074599 | 0.854458 | 1.21E-61 | -1.69E-46 |
| MS.gene058007 | MS.gene074599 | 0.836503 | 9.01E-57 | -1.69E-46 |
| MS.gene058019 | MS.gene074599 | 0.825533 | 4.45E-54 | -1.69E-46 |
| MS.gene058082 | MS.gene074599 | 0.811497 | 6.80E-51 | -1.69E-46 |
| MS.gene05811 | MS.gene074599 | 0.831008 | 2.13E-55 | -1.69E-46 |
| MS.gene058130 | MS.gene074599 | 0.812681 | 3.75E-51 | -1.69E-46 |
| MS.gene058233 | MS.gene074599 | 0.812122 | 4.97E-51 | -1.69E-46 |
| MS.gene058293 | MS.gene074599 | 0.835904 | 1.28E-56 | -1.69E-46 |
| MS.gene058323 | MS.gene074599 | 0.803292 | 3.74E-49 | -1.69E-46 |
| MS.gene058365 | MS.gene074599 | 0.806439 | 8.22E-50 | -1.69E-46 |
| MS.gene058376 | MS.gene074599 | 0.830311 | 3.15E-55 | -1.69E-46 |
| MS.gene05842 | MS.gene074599 | 0.833016 | 6.79E-56 | -1.69E-46 |
| MS.gene058444 | MS.gene074599 | 0.818916 | 1.53E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene074599 | 0.843973 | 1.01E-58 | -1.69E-46 |
| MS.gene058700 | MS.gene074599 | 0.835235 | 1.89E-56 | -1.69E-46 |
| MS.gene058787 | MS.gene074599 | 0.808792 | 2.60E-50 | -1.69E-46 |
| MS.gene058928 | MS.gene074599 | 0.86141 | 1.05E-63 | -1.69E-46 |
| MS.gene058948 | MS.gene074599 | 0.816518 | 5.31E-52 | -1.69E-46 |
| MS.gene058993 | MS.gene074599 | 0.801724 | 7.87E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene074599 | 0.850315 | 1.84E-60 | -1.69E-46 |
| MS.gene059141 | MS.gene074599 | 0.82984 | 4.11E-55 | -1.69E-46 |
| MS.gene05934 | MS.gene074599 | 0.814312 | 1.64E-51 | -1.69E-46 |
| MS.gene059366 | MS.gene074599 | 0.859568 | 3.78E-63 | -1.69E-46 |
| MS.gene059368 | MS.gene074599 | 0.800712 | 1.27E-48 | -1.69E-46 |
| MS.gene059420 | MS.gene074599 | 0.84726 | 1.29E-59 | -1.69E-46 |
| MS.gene059455 | MS.gene074599 | 0.831612 | 1.51E-55 | -1.69E-46 |
| MS.gene059536 | MS.gene074599 | 0.864459 | 1.20E-64 | -1.69E-46 |
| MS.gene059597 | MS.gene074599 | 0.834609 | 2.71E-56 | -1.69E-46 |
| MS.gene059674 | MS.gene074599 | 0.808882 | 2.49E-50 | -1.69E-46 |
| MS.gene059676 | MS.gene074599 | 0.861537 | 9.57E-64 | -1.69E-46 |
| MS.gene059688 | MS.gene074599 | 0.891019 | 5.82E-74 | -1.69E-46 |
| MS.gene059692 | MS.gene074599 | 0.887639 | 1.20E-72 | -1.69E-46 |
| MS.gene059695 | MS.gene074599 | 0.891379 | 4.19E-74 | -1.69E-46 |
| MS.gene059711 | MS.gene074599 | 0.842387 | 2.67E-58 | -1.69E-46 |
| MS.gene059807 | MS.gene074599 | 0.830727 | 2.49E-55 | -1.69E-46 |
| MS.gene05984 | MS.gene074599 | 0.820578 | 6.37E-53 | -1.69E-46 |
| MS.gene059894 | MS.gene074599 | 0.803893 | 2.80E-49 | -1.69E-46 |
| MS.gene059902 | MS.gene074599 | 0.835752 | 1.40E-56 | -1.69E-46 |
| MS.gene059960 | MS.gene074599 | 0.825604 | 4.28E-54 | -1.69E-46 |
| MS.gene060193 | MS.gene074599 | 0.809363 | 1.96E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene074599 | 0.862537 | 4.72E-64 | -1.69E-46 |
| MS.gene060407 | MS.gene074599 | 0.805861 | 1.09E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene074599 | 0.815527 | 8.83E-52 | -1.69E-46 |
| MS.gene060804 | MS.gene074599 | 0.849989 | 2.27E-60 | -1.69E-46 |
| MS.gene060818 | MS.gene074599 | 0.855128 | 7.76E-62 | -1.69E-46 |
| MS.gene060835 | MS.gene074599 | 0.817623 | 3.00E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene074599 | 0.888892 | 3.94E-73 | -1.69E-46 |
| MS.gene06092 | MS.gene074599 | 0.831616 | 1.51E-55 | -1.69E-46 |
| MS.gene060986 | MS.gene074599 | 0.840975 | 6.29E-58 | -1.69E-46 |
| MS.gene061041 | MS.gene074599 | 0.834177 | 3.49E-56 | -1.69E-46 |
| MS.gene061049 | MS.gene074599 | 0.822962 | 1.79E-53 | -1.69E-46 |
| MS.gene061051 | MS.gene074599 | -0.821283 | 4.38E-53 | -1.69E-46 |
| MS.gene061154 | MS.gene074599 | 0.829543 | 4.85E-55 | -1.69E-46 |
| MS.gene061200 | MS.gene074599 | 0.831841 | 1.33E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 135 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGGAGCAACATACTTTA+TGG | 0.200265 | 4.3:-24112840 | MS.gene074599:CDS |
| CTCCGCTCTTGCTGCTGTTC+TGG | 0.212629 | 4.3:+24111623 | None:intergenic |
| AAACCTTGCAACCAACTTAT+AGG | 0.224407 | 4.3:-24111754 | MS.gene074599:CDS |
| CGAAAAGCAACTAAAAGATT+TGG | 0.258652 | 4.3:-24110919 | MS.gene074599:CDS |
| ACATCATATACTCCACAATT+TGG | 0.262844 | 4.3:-24110786 | MS.gene074599:CDS |
| CTTGTTCTCATTGATGAAAT+TGG | 0.280062 | 4.3:-24111942 | MS.gene074599:CDS |
| ATAGTACCTAAACTGAAAAT+TGG | 0.281975 | 4.3:+24112615 | None:intergenic |
| TTGCATAGATTGCAATCTTT+TGG | 0.292449 | 4.3:-24113086 | MS.gene074599:CDS |
| CTAGAATGTGCGTGGGCATC+AGG | 0.296994 | 4.3:-24112913 | MS.gene074599:CDS |
| GACCTTATCCTTGCAGATAT+TGG | 0.312231 | 4.3:-24112204 | MS.gene074599:CDS |
| TTGCATCCTCTAACTCTTGT+TGG | 0.316694 | 4.3:+24110973 | None:intergenic |
| TTCAAATCTATTGCTTCTTT+CGG | 0.318025 | 4.3:+24112815 | None:intergenic |
| AGGTCAAACCAAGGAAGTTT+TGG | 0.325111 | 4.3:+24112222 | None:intergenic |
| AACCTTGCAACCAACTTATA+GGG | 0.326348 | 4.3:-24111753 | MS.gene074599:CDS |
| TCATTAGATCAGAACGAAAA+AGG | 0.327607 | 4.3:-24113030 | MS.gene074599:CDS |
| CTTGGCAGGCAGATGCATTC+CGG | 0.328681 | 4.3:+24112251 | None:intergenic |
| GATCGACGCTTAGTAATAAA+TGG | 0.355822 | 4.3:+24112935 | None:intergenic |
| GAAAAGCAACTAAAAGATTT+GGG | 0.371137 | 4.3:-24110918 | MS.gene074599:CDS |
| ATCAGAGATAAAATATTTGT+TGG | 0.373046 | 4.3:-24112706 | MS.gene074599:CDS |
| TCTGAGTTGGGTAATGGAAA+TGG | 0.381561 | 4.3:-24112438 | MS.gene074599:CDS |
| AACTAGTTCTCCCACTCATC+AGG | 0.387558 | 4.3:-24110607 | MS.gene074599:CDS |
| CAAGGTCTTCTGCCTCCCTT+TGG | 0.387704 | 4.3:+24111039 | None:intergenic |
| AGGGTTCTCTGGGGATGTAT+TGG | 0.387828 | 4.3:-24111734 | MS.gene074599:CDS |
| GTTCTGAATGCCAGCAGCTC+TGG | 0.388227 | 4.3:-24112857 | MS.gene074599:CDS |
| AACCAACTTATAGGGTTCTC+TGG | 0.388468 | 4.3:-24111745 | MS.gene074599:CDS |
| TTGTAATTTCCTAATGGGCT+TGG | 0.389277 | 4.3:-24113125 | MS.gene074599:CDS |
| GAAACAATCTTGGTACAGTA+TGG | 0.389406 | 4.3:-24110696 | MS.gene074599:CDS |
| TTAAGCATAGCGCAATCTAT+TGG | 0.392431 | 4.3:-24111698 | MS.gene074599:CDS |
| AATTCTTCTGAGTTGGGTAA+TGG | 0.397648 | 4.3:-24112444 | MS.gene074599:CDS |
| TCCTAATGGGCTTGGAGCGC+AGG | 0.398236 | 4.3:-24113117 | MS.gene074599:CDS |
| AATGCTCTATCAGTCATTAC+AGG | 0.405453 | 4.3:-24111597 | MS.gene074599:CDS |
| GTTCATAATTTCTGCATGAA+TGG | 0.405550 | 4.3:+24111532 | None:intergenic |
| CAAGTCCGTGTGAAGGGATT+GGG | 0.412733 | 4.3:-24110759 | MS.gene074599:CDS |
| GTCATCTCAGGACCTAATAC+TGG | 0.416951 | 4.3:-24112327 | MS.gene074599:CDS |
| GTTGACTTCAAAATTAGATC+TGG | 0.420665 | 4.3:-24112363 | MS.gene074599:CDS |
| ACTAGAGTGGTGGTCATCTC+AGG | 0.432380 | 4.3:-24112339 | MS.gene074599:CDS |
| GTCTGGAAATTCTTCTGAGT+TGG | 0.433211 | 4.3:-24112451 | MS.gene074599:CDS |
| GCATTCAGAACTATACCTTC+TGG | 0.438902 | 4.3:+24112869 | None:intergenic |
| TCCTGCGCTCCAAGCCCATT+AGG | 0.439036 | 4.3:+24113116 | None:intergenic |
| TCTGGAAATTCTTCTGAGTT+GGG | 0.439306 | 4.3:-24112450 | MS.gene074599:CDS |
| GCCTATGCTCAATGGATGAA+TGG | 0.442164 | 4.3:-24112645 | MS.gene074599:CDS |
| GCAAGTCCGTGTGAAGGGAT+TGG | 0.444020 | 4.3:-24110760 | MS.gene074599:CDS |
| TGAGTGGGAGAACTAGTTGC+AGG | 0.444981 | 4.3:+24110612 | None:intergenic |
| CTCCAATATCTGCAAGGATA+AGG | 0.447195 | 4.3:+24112202 | None:intergenic |
| ACGGGTCCAACAAGAGTTAG+AGG | 0.448882 | 4.3:-24110979 | MS.gene074599:CDS |
| TATGGCAAAGGAAGCTCAAC+GGG | 0.452879 | 4.3:-24110997 | MS.gene074599:CDS |
| AGAAAAGTCCAAAACTTCCT+TGG | 0.454680 | 4.3:-24112230 | MS.gene074599:CDS |
| AATCCTGGACTCTTTATTGA+AGG | 0.459366 | 4.3:-24112999 | MS.gene074599:CDS |
| TAGACGTGAAACGATGCTTA+TGG | 0.459950 | 4.3:-24111015 | MS.gene074599:CDS |
| CTTTAATTATTGAATTGAGT+TGG | 0.464631 | 4.3:+24110889 | None:intergenic |
| GTTAAAGGCTCAAGCTGAAA+AGG | 0.465641 | 4.3:-24111561 | MS.gene074599:CDS |
| ACCAACTTATAGGGTTCTCT+GGG | 0.467907 | 4.3:-24111744 | MS.gene074599:CDS |
| TTCAATGAAAACGTTGGGCC+TGG | 0.468162 | 4.3:-24112292 | MS.gene074599:CDS |
| GCAGGATTCTTTGCACTTGG+TGG | 0.477236 | 4.3:+24110630 | None:intergenic |
| CCGCAGATATTGTAAGATAC+TGG | 0.478412 | 4.3:+24111881 | None:intergenic |
| GTATGTTGCTCCAGAGCTGC+TGG | 0.478675 | 4.3:+24112847 | None:intergenic |
| GCCACAGTGGTAGAATTGCC+TGG | 0.478854 | 4.3:-24110726 | MS.gene074599:CDS |
| CAATGACATTGCGGTCGTGC+AGG | 0.479424 | 4.3:-24112565 | MS.gene074599:CDS |
| CTCATTGATGAAATTGGTAG+TGG | 0.480474 | 4.3:-24111936 | MS.gene074599:CDS |
| AGAGGATGCAAAATCTCAAA+TGG | 0.483805 | 4.3:-24110961 | MS.gene074599:CDS |
| GATAATGTCACACTAAGGTC+TGG | 0.494415 | 4.3:-24112468 | MS.gene074599:CDS |
| ACTGCTTCAATGAAAACGTT+GGG | 0.494465 | 4.3:-24112297 | MS.gene074599:CDS |
| CAAGAGCTGCCTATGCTCAA+TGG | 0.496220 | 4.3:-24112653 | MS.gene074599:CDS |
| CCTATGCTCAATGGATGAAT+GGG | 0.497615 | 4.3:-24112644 | MS.gene074599:CDS |
| GTTGCAGGATTCTTTGCACT+TGG | 0.499764 | 4.3:+24110627 | None:intergenic |
| CGATTTAACAGTAAATATTG+AGG | 0.507073 | 4.3:-24112538 | MS.gene074599:CDS |
| ACCTGCTTTCCCTGATGAGT+GGG | 0.510949 | 4.3:+24110597 | None:intergenic |
| TATGCGGCATCCATTACTCC+TGG | 0.512692 | 4.3:-24112514 | MS.gene074599:CDS |
| ATGCGATCAGCGCCACTGAT+GGG | 0.523837 | 4.3:+24110810 | None:intergenic |
| AACCCTATAAGTTGGTTGCA+AGG | 0.524314 | 4.3:+24111751 | None:intergenic |
| GCATCGTTTCACGTCTATCA+AGG | 0.526470 | 4.3:+24111021 | None:intergenic |
| CCACAGTGGTAGAATTGCCT+GGG | 0.526487 | 4.3:-24110725 | MS.gene074599:CDS |
| TCCCACTCATCAGGGAAAGC+AGG | 0.529174 | 4.3:-24110598 | None:intergenic |
| TTCAGTTTAGGTACTATTGG+AGG | 0.531767 | 4.3:-24112609 | MS.gene074599:CDS |
| GTTCTGATCTAATGATCTCC+AGG | 0.531958 | 4.3:+24113038 | None:intergenic |
| CTTCCTTCAATAAAGAGTCC+AGG | 0.535939 | 4.3:+24112996 | None:intergenic |
| TGGGCATCAGGGCTTCGTAT+AGG | 0.539792 | 4.3:-24112901 | MS.gene074599:CDS |
| TAATTGACCATGCACAAAAG+TGG | 0.545555 | 4.3:-24111661 | MS.gene074599:CDS |
| GGAGAGCAAGTCCGTGTGAA+GGG | 0.549755 | 4.3:-24110765 | MS.gene074599:CDS |
| CCCCAGAGAACCCTATAAGT+TGG | 0.550494 | 4.3:+24111743 | None:intergenic |
| CGGACTTGCTCTCCAAATTG+TGG | 0.554429 | 4.3:+24110774 | None:intergenic |
| TGGGGATGATGAAACAATCT+TGG | 0.554483 | 4.3:-24110706 | MS.gene074599:CDS |
| TCTGCGGGAACATGTTAACT+TGG | 0.556527 | 4.3:-24111865 | MS.gene074599:CDS |
| AGAGACGACTCCAGGAGTAA+TGG | 0.558135 | 4.3:+24112504 | None:intergenic |
| AACCAGAACAGCAGCAAGAG+CGG | 0.560885 | 4.3:-24111625 | MS.gene074599:CDS |
| GATTTAACAGTAAATATTGA+GGG | 0.563255 | 4.3:-24112537 | MS.gene074599:CDS |
| TATAGGTATTTGCTTCCAGA+AGG | 0.564358 | 4.3:-24112884 | MS.gene074599:CDS |
| TGCAGATATTGGAGATCACC+AGG | 0.564613 | 4.3:-24112193 | MS.gene074599:intron |
| TGATAGAGCAAGTGAAGACC+TGG | 0.568238 | 4.3:-24113056 | MS.gene074599:CDS |
| AGGTTGCAATTCTGTTGAAG+AGG | 0.570911 | 4.3:-24112589 | MS.gene074599:CDS |
| GCATCACTTATGTCAAAAGC+CGG | 0.571118 | 4.3:-24112270 | MS.gene074599:CDS |
| AACTGATCCTTCAGAAGGTG+TGG | 0.571658 | 4.3:-24111913 | MS.gene074599:CDS |
| CAGTATCTTACAATATCTGC+GGG | 0.572845 | 4.3:-24111880 | MS.gene074599:CDS |
| TTCCTCCCAATCCCTTCACA+CGG | 0.581458 | 4.3:+24110754 | None:intergenic |
| GCCACTGATGGGAGAACCAA+CGG | 0.582829 | 4.3:+24110821 | None:intergenic |
| AAGATTGTTTCATCATCCCC+AGG | 0.584283 | 4.3:+24110708 | None:intergenic |
| AACTGCTTCAATGAAAACGT+TGG | 0.585712 | 4.3:-24112298 | MS.gene074599:CDS |
| TGGAGAGCAAGTCCGTGTGA+AGG | 0.586036 | 4.3:-24110766 | MS.gene074599:CDS |
| TGAAACGATGCTTATGGCAA+AGG | 0.587621 | 4.3:-24111009 | MS.gene074599:CDS |
| ACTAGTTCTCCCACTCATCA+GGG | 0.590763 | 4.3:-24110606 | MS.gene074599:CDS |
| GCCGTTGGTTCTCCCATCAG+TGG | 0.592897 | 4.3:-24110822 | MS.gene074599:CDS |
| TTTCAGATAATGTCACACTA+AGG | 0.593354 | 4.3:-24112473 | MS.gene074599:CDS |
| TACCTGCTTTCCCTGATGAG+TGG | 0.594282 | 4.3:+24110596 | None:intergenic |
| TAGAATGTGCGTGGGCATCA+GGG | 0.594705 | 4.3:-24112912 | MS.gene074599:CDS |
| AATGCGATCAGCGCCACTGA+TGG | 0.596091 | 4.3:+24110809 | None:intergenic |
| GCGTCGATCTAGAATGTGCG+TGG | 0.598379 | 4.3:-24112921 | MS.gene074599:CDS |
| AATTGACCATGCACAAAAGT+GGG | 0.600519 | 4.3:-24111660 | MS.gene074599:CDS |
| ATCTCAGGACCTAATACTGG+AGG | 0.603222 | 4.3:-24112324 | MS.gene074599:CDS |
| GAAAGAGCCACACCTTCTGA+AGG | 0.603440 | 4.3:+24111906 | None:intergenic |
| GTCCGTGTGAAGGGATTGGG+AGG | 0.612668 | 4.3:-24110756 | MS.gene074599:CDS |
| CCAGTATCTTACAATATCTG+CGG | 0.612724 | 4.3:-24111881 | MS.gene074599:CDS |
| CCCATTCATCCATTGAGCAT+AGG | 0.615621 | 4.3:+24112644 | None:intergenic |
| GCTTCTAAAAGCGCGTCACA+AGG | 0.619119 | 4.3:-24112408 | MS.gene074599:CDS |
| AATTAGATCTGGAACTAGAG+TGG | 0.621351 | 4.3:-24112352 | MS.gene074599:CDS |
| AAAGCTCATACTCCTGCCGT+TGG | 0.625973 | 4.3:-24110837 | MS.gene074599:CDS |
| CAGTAAATATTGAGGGTATG+CGG | 0.626418 | 4.3:-24112530 | MS.gene074599:CDS |
| TTATGGCAAAGGAAGCTCAA+CGG | 0.627066 | 4.3:-24110998 | MS.gene074599:CDS |
| AGTGGAACTGATCCTTCAGA+AGG | 0.631076 | 4.3:-24111918 | MS.gene074599:CDS |
| CTGATGGGAGAACCAACGGC+AGG | 0.643450 | 4.3:+24110825 | None:intergenic |
| GGTGATCTCCAATATCTGCA+AGG | 0.644964 | 4.3:+24112196 | None:intergenic |
| TTCCAGTGAAAATTCCATTG+CGG | 0.649211 | 4.3:+24111775 | None:intergenic |
| CGTCGATCTAGAATGTGCGT+GGG | 0.653354 | 4.3:-24112920 | MS.gene074599:CDS |
| TGACCATGCACAAAAGTGGG+TGG | 0.654188 | 4.3:-24111657 | MS.gene074599:CDS |
| GGGTAATGGAAATGGAACAA+TGG | 0.655085 | 4.3:-24112430 | MS.gene074599:CDS |
| GAACAGCAGCAAGAGCGGAG+AGG | 0.655853 | 4.3:-24111620 | MS.gene074599:CDS |
| GCTCTATCAGTCATTACAGG+AGG | 0.665919 | 4.3:-24111594 | MS.gene074599:CDS |
| TCTCAGGACCTAATACTGGA+GGG | 0.667789 | 4.3:-24112323 | MS.gene074599:CDS |
| TAGATCTGGAACTAGAGTGG+TGG | 0.673809 | 4.3:-24112349 | MS.gene074599:CDS |
| CACAGTGGTAGAATTGCCTG+GGG | 0.691114 | 4.3:-24110724 | MS.gene074599:CDS |
| AATTATGAACGTGTACTCTG+AGG | 0.698166 | 4.3:-24111519 | MS.gene074599:intron |
| TGAAGAGGACAATGACATTG+CGG | 0.707528 | 4.3:-24112574 | MS.gene074599:CDS |
| CCCAGGCAATTCTACCACTG+TGG | 0.714085 | 4.3:+24110725 | None:intergenic |
| GGGAGGAAAATTAGCCACAG+TGG | 0.714859 | 4.3:-24110739 | MS.gene074599:CDS |
| GCAAGGATAAGGTCAAACCA+AGG | 0.720894 | 4.3:+24112213 | None:intergenic |
| CCAACTTATAGGGTTCTCTG+GGG | 0.797932 | 4.3:-24111743 | MS.gene074599:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATAATATCATG+TGG | - | chr4.3:24111663-24111682 | MS.gene074599:CDS | 10.0% |
| !! | AAAAATTGTAATTTCCTAAT+GGG | - | chr4.3:24110625-24110644 | MS.gene074599:CDS | 15.0% |
| !! | AATTTCAGATAAACTTTAAA+AGG | + | chr4.3:24112354-24112373 | None:intergenic | 15.0% |
| !! | ATAATGATTATCATACTATA+TGG | + | chr4.3:24112327-24112346 | None:intergenic | 15.0% |
| !!! | ATTTCAGATAAACTTTAAAA+GGG | + | chr4.3:24112353-24112372 | None:intergenic | 15.0% |
| !! | ATATTTAAATTAACAGCTCT+TGG | + | chr4.3:24112503-24112522 | None:intergenic | 20.0% |
| !! | ATCAGAGATAAAATATTTGT+TGG | - | chr4.3:24111049-24111068 | MS.gene074599:intron | 20.0% |
| !! | CAAAAATTGTAATTTCCTAA+TGG | - | chr4.3:24110624-24110643 | MS.gene074599:CDS | 20.0% |
| !! | CTTTAATTATTGAATTGAGT+TGG | + | chr4.3:24112869-24112888 | None:intergenic | 20.0% |
| !! | GATTTAACAGTAAATATTGA+GGG | - | chr4.3:24111218-24111237 | MS.gene074599:intron | 20.0% |
| ! | AAAAAAGTTCAGATATTACC+TGG | + | chr4.3:24111583-24111602 | None:intergenic | 25.0% |
| ! | ATAGTACCTAAACTGAAAAT+TGG | + | chr4.3:24111143-24111162 | None:intergenic | 25.0% |
| ! | ATTAATAGATATCCAATCCT+CGG | - | chr4.3:24112471-24112490 | MS.gene074599:CDS | 25.0% |
| ! | CGATTTAACAGTAAATATTG+AGG | - | chr4.3:24111217-24111236 | MS.gene074599:intron | 25.0% |
| ! | GAAAAGCAACTAAAAGATTT+GGG | - | chr4.3:24112837-24112856 | MS.gene074599:CDS | 25.0% |
| ! | TTATTATAGTTTCTTCTCCT+TGG | - | chr4.3:24112300-24112319 | MS.gene074599:CDS | 25.0% |
| ! | TTCAAATCTATTGCTTCTTT+CGG | + | chr4.3:24110943-24110962 | None:intergenic | 25.0% |
| !! | AAAATCTCTCAACTTTTAGT+GGG | - | chr4.3:24111742-24111761 | MS.gene074599:CDS | 25.0% |
| !! | ATATGTCCAATTTTCAGTTT+AGG | - | chr4.3:24111134-24111153 | MS.gene074599:intron | 25.0% |
| !! | ATTTTCAGTTTAGGTACTAT+TGG | - | chr4.3:24111143-24111162 | MS.gene074599:intron | 25.0% |
| !! | ATTTTTGCAGTATTTCAAGA+AGG | + | chr4.3:24110611-24110630 | None:intergenic | 25.0% |
| !! | TAACGGCATTATGAAAATTT+TGG | + | chr4.3:24112542-24112561 | None:intergenic | 25.0% |
| !! | TTTTTGCAGTATTTCAAGAA+GGG | + | chr4.3:24110610-24110629 | None:intergenic | 25.0% |
| !!! | AAGTATCGTCTCAAATTTTT+CGG | - | chr4.3:24110779-24110798 | MS.gene074599:CDS | 25.0% |
| AAAAAGGAACATAGAAATCC+TGG | - | chr4.3:24110741-24110760 | MS.gene074599:CDS | 30.0% | |
| ACATCATATACTCCACAATT+TGG | - | chr4.3:24112969-24112988 | MS.gene074599:CDS | 30.0% | |
| CATTACAGGAGGAAAAAAAT+CGG | - | chr4.3:24112172-24112191 | MS.gene074599:intron | 30.0% | |
| CGAAAAGCAACTAAAAGATT+TGG | - | chr4.3:24112836-24112855 | MS.gene074599:CDS | 30.0% | |
| CTTGTTCTCATTGATGAAAT+TGG | - | chr4.3:24111813-24111832 | MS.gene074599:intron | 30.0% | |
| GATCTTTGCAAAAGAAGAAA+AGG | + | chr4.3:24112697-24112716 | None:intergenic | 30.0% | |
| GATTTGAACAACATGAAGTT+AGG | - | chr4.3:24110955-24110974 | MS.gene074599:CDS | 30.0% | |
| GGATTGGATATCTATTAATG+AGG | + | chr4.3:24112470-24112489 | None:intergenic | 30.0% | |
| GTTCATAATTTCTGCATGAA+TGG | + | chr4.3:24112226-24112245 | None:intergenic | 30.0% | |
| TCATTAGATCAGAACGAAAA+AGG | - | chr4.3:24110725-24110744 | MS.gene074599:CDS | 30.0% | |
| TTAATAGATATCCAATCCTC+GGG | - | chr4.3:24112472-24112491 | MS.gene074599:CDS | 30.0% | |
| TTATCATACTATATGGACCA+AGG | + | chr4.3:24112320-24112339 | None:intergenic | 30.0% | |
| TTTCAGATAATGTCACACTA+AGG | - | chr4.3:24111282-24111301 | MS.gene074599:intron | 30.0% | |
| ! | AAGTTGAGAGATTTTGTTCA+AGG | + | chr4.3:24111737-24111756 | None:intergenic | 30.0% |
| ! | AGTATCGTCTCAAATTTTTC+GGG | - | chr4.3:24110780-24110799 | MS.gene074599:CDS | 30.0% |
| ! | AGTTGAGAGATTTTGTTCAA+GGG | + | chr4.3:24111736-24111755 | None:intergenic | 30.0% |
| ! | ATCTAAGTACTTTGAAGGAA+AGG | - | chr4.3:24111938-24111957 | MS.gene074599:CDS | 30.0% |
| ! | ATGAAAATTTTGGATGGAAG+AGG | + | chr4.3:24112532-24112551 | None:intergenic | 30.0% |
| ! | CAAAATCTCTCAACTTTTAG+TGG | - | chr4.3:24111741-24111760 | MS.gene074599:CDS | 30.0% |
| ! | GGCATTATGAAAATTTTGGA+TGG | + | chr4.3:24112538-24112557 | None:intergenic | 30.0% |
| ! | GTTGACTTCAAAATTAGATC+TGG | - | chr4.3:24111392-24111411 | MS.gene074599:intron | 30.0% |
| ! | TCTAAGTACTTTGAAGGAAA+GGG | - | chr4.3:24111939-24111958 | MS.gene074599:CDS | 30.0% |
| ! | TTCTTTTGCAAAGATCCAAA+GGG | - | chr4.3:24112701-24112720 | MS.gene074599:CDS | 30.0% |
| ! | TTGCATAGATTGCAATCTTT+TGG | - | chr4.3:24110669-24110688 | MS.gene074599:CDS | 30.0% |
| ! | TTTCATAATGCCGTTATTTC+TGG | - | chr4.3:24112546-24112565 | MS.gene074599:CDS | 30.0% |
| ! | TTTTGCAGTATTTCAAGAAG+GGG | + | chr4.3:24110609-24110628 | None:intergenic | 30.0% |
| !! | TTCATAATGCCGTTATTTCT+GGG | - | chr4.3:24112547-24112566 | MS.gene074599:CDS | 30.0% |
| !!! | GATCTAATTTTGAAGTCAAC+TGG | + | chr4.3:24111392-24111411 | None:intergenic | 30.0% |
| AAACCTTGCAACCAACTTAT+AGG | - | chr4.3:24112001-24112020 | MS.gene074599:CDS | 35.0% | |
| AACCTTGCAACCAACTTATA+GGG | - | chr4.3:24112002-24112021 | MS.gene074599:CDS | 35.0% | |
| AACTGCTTCAATGAAAACGT+TGG | - | chr4.3:24111457-24111476 | MS.gene074599:intron | 35.0% | |
| AATCCTGGACTCTTTATTGA+AGG | - | chr4.3:24110756-24110775 | MS.gene074599:CDS | 35.0% | |
| AATGCTCTATCAGTCATTAC+AGG | - | chr4.3:24112158-24112177 | MS.gene074599:intron | 35.0% | |
| AATTATGAACGTGTACTCTG+AGG | - | chr4.3:24112236-24112255 | MS.gene074599:CDS | 35.0% | |
| AATTGACCATGCACAAAAGT+GGG | - | chr4.3:24112095-24112114 | MS.gene074599:intron | 35.0% | |
| ACCACAAAATCAAAGTGTGA+TGG | - | chr4.3:24112407-24112426 | MS.gene074599:CDS | 35.0% | |
| ACTCAAAATTGCTCTTTCCT+CGG | + | chr4.3:24111000-24111019 | None:intergenic | 35.0% | |
| ACTGCTTCAATGAAAACGTT+GGG | - | chr4.3:24111458-24111477 | MS.gene074599:intron | 35.0% | |
| ACTTAGATCAGCATAATGAG+TGG | + | chr4.3:24111926-24111945 | None:intergenic | 35.0% | |
| AGAAAAGTCCAAAACTTCCT+TGG | - | chr4.3:24111525-24111544 | MS.gene074599:CDS | 35.0% | |
| AGAAGAAAAGGAAAAGAGTG+AGG | + | chr4.3:24112685-24112704 | None:intergenic | 35.0% | |
| AGAGGATGCAAAATCTCAAA+TGG | - | chr4.3:24112794-24112813 | MS.gene074599:intron | 35.0% | |
| CAGTATCTTACAATATCTGC+GGG | - | chr4.3:24111875-24111894 | MS.gene074599:CDS | 35.0% | |
| CCAGTATCTTACAATATCTG+CGG | - | chr4.3:24111874-24111893 | MS.gene074599:CDS | 35.0% | |
| CTCATTGATGAAATTGGTAG+TGG | - | chr4.3:24111819-24111838 | MS.gene074599:intron | 35.0% | |
| GAAACAATCTTGGTACAGTA+TGG | - | chr4.3:24113059-24113078 | MS.gene074599:CDS | 35.0% | |
| GAAGAAAAGGAAAAGAGTGA+GGG | + | chr4.3:24112684-24112703 | None:intergenic | 35.0% | |
| GATCGACGCTTAGTAATAAA+TGG | + | chr4.3:24110823-24110842 | None:intergenic | 35.0% | |
| GGAGGAAAAAAATCGGTTAA+AGG | - | chr4.3:24112179-24112198 | MS.gene074599:intron | 35.0% | |
| GGATATCTATTAATGAGGCA+CGG | + | chr4.3:24112465-24112484 | None:intergenic | 35.0% | |
| TAATAGATATCCAATCCTCG+GGG | - | chr4.3:24112473-24112492 | MS.gene074599:CDS | 35.0% | |
| TAATTGACCATGCACAAAAG+TGG | - | chr4.3:24112094-24112113 | MS.gene074599:intron | 35.0% | |
| TATAGGTATTTGCTTCCAGA+AGG | - | chr4.3:24110871-24110890 | MS.gene074599:CDS | 35.0% | |
| TCTGGAAATTCTTCTGAGTT+GGG | - | chr4.3:24111305-24111324 | MS.gene074599:intron | 35.0% | |
| TGCTGATCTAAGTACTTTGA+AGG | - | chr4.3:24111933-24111952 | MS.gene074599:CDS | 35.0% | |
| TTAAGCATAGCGCAATCTAT+TGG | - | chr4.3:24112057-24112076 | MS.gene074599:intron | 35.0% | |
| TTCAGTTTAGGTACTATTGG+AGG | - | chr4.3:24111146-24111165 | MS.gene074599:intron | 35.0% | |
| TTCCAGTGAAAATTCCATTG+CGG | + | chr4.3:24111983-24112002 | None:intergenic | 35.0% | |
| ! | AATTAGATCTGGAACTAGAG+TGG | - | chr4.3:24111403-24111422 | MS.gene074599:intron | 35.0% |
| ! | AATTCTTCTGAGTTGGGTAA+TGG | - | chr4.3:24111311-24111330 | MS.gene074599:intron | 35.0% |
| ! | ACCATTTTCCCCAGAAATAA+CGG | + | chr4.3:24112559-24112578 | None:intergenic | 35.0% |
| ! | AGTATGAGCTTTTACAATGG+AGG | + | chr4.3:24112910-24112929 | None:intergenic | 35.0% |
| ! | CAGTAAATATTGAGGGTATG+CGG | - | chr4.3:24111225-24111244 | MS.gene074599:intron | 35.0% |
| ! | CTTCTTTTGCAAAGATCCAA+AGG | - | chr4.3:24112700-24112719 | MS.gene074599:CDS | 35.0% |
| !! | AGGAGTATGAGCTTTTACAA+TGG | + | chr4.3:24112913-24112932 | None:intergenic | 35.0% |
| !! | GAGAACAAGTGATTGTTTTG+AGG | + | chr4.3:24111802-24111821 | None:intergenic | 35.0% |
| !! | TATCCGTAAGTTTTTGGAAG+TGG | - | chr4.3:24111776-24111795 | MS.gene074599:CDS | 35.0% |
| !! | TCATAATGCCGTTATTTCTG+GGG | - | chr4.3:24112548-24112567 | MS.gene074599:CDS | 35.0% |
| !! | TCCATCACACTTTGATTTTG+TGG | + | chr4.3:24112411-24112430 | None:intergenic | 35.0% |
| !! | TTGTAATTTCCTAATGGGCT+TGG | - | chr4.3:24110630-24110649 | MS.gene074599:CDS | 35.0% |
| !!! | AGGAAGTTTTGGACTTTTCT+TGG | + | chr4.3:24111525-24111544 | None:intergenic | 35.0% |
| !!! | ATGTTTTGAAAATGCCGCAA+TGG | - | chr4.3:24111966-24111985 | MS.gene074599:CDS | 35.0% |
| AACCAACTTATAGGGTTCTC+TGG | - | chr4.3:24112010-24112029 | MS.gene074599:CDS | 40.0% | |
| AAGATTGTTTCATCATCCCC+AGG | + | chr4.3:24113050-24113069 | None:intergenic | 40.0% | |
| ACCAACTTATAGGGTTCTCT+GGG | - | chr4.3:24112011-24112030 | MS.gene074599:CDS | 40.0% | |
| AGGCCACTTCCAAAAACTTA+CGG | + | chr4.3:24111782-24111801 | None:intergenic | 40.0% | |
| AGGTTGCAATTCTGTTGAAG+AGG | - | chr4.3:24111166-24111185 | MS.gene074599:intron | 40.0% | |
| CCGCAGATATTGTAAGATAC+TGG | + | chr4.3:24111877-24111896 | None:intergenic | 40.0% | |
| CCTATGCTCAATGGATGAAT+GGG | - | chr4.3:24111111-24111130 | MS.gene074599:intron | 40.0% | |
| CTCATTGCTTTGCACTTTCT+TGG | - | chr4.3:24112644-24112663 | MS.gene074599:CDS | 40.0% | |
| CTCCAATATCTGCAAGGATA+AGG | + | chr4.3:24111556-24111575 | None:intergenic | 40.0% | |
| CTTCCTTCAATAAAGAGTCC+AGG | + | chr4.3:24110762-24110781 | None:intergenic | 40.0% | |
| GACATTCAATTACAGACTGC+AGG | + | chr4.3:24112608-24112627 | None:intergenic | 40.0% | |
| GACCTTATCCTTGCAGATAT+TGG | - | chr4.3:24111551-24111570 | MS.gene074599:CDS | 40.0% | |
| GATAATGTCACACTAAGGTC+TGG | - | chr4.3:24111287-24111306 | MS.gene074599:intron | 40.0% | |
| GCATCACTTATGTCAAAAGC+CGG | - | chr4.3:24111485-24111504 | MS.gene074599:intron | 40.0% | |
| GCATTCAGAACTATACCTTC+TGG | + | chr4.3:24110889-24110908 | None:intergenic | 40.0% | |
| GTCTGGAAATTCTTCTGAGT+TGG | - | chr4.3:24111304-24111323 | MS.gene074599:intron | 40.0% | |
| GTTAAAGGCTCAAGCTGAAA+AGG | - | chr4.3:24112194-24112213 | MS.gene074599:CDS | 40.0% | |
| GTTCTGATCTAATGATCTCC+AGG | + | chr4.3:24110720-24110739 | None:intergenic | 40.0% | |
| TAGACGTGAAACGATGCTTA+TGG | - | chr4.3:24112740-24112759 | MS.gene074599:CDS | 40.0% | |
| TGAAACGATGCTTATGGCAA+AGG | - | chr4.3:24112746-24112765 | MS.gene074599:CDS | 40.0% | |
| TGAAGAGGACAATGACATTG+CGG | - | chr4.3:24111181-24111200 | MS.gene074599:intron | 40.0% | |
| TGGGGATGATGAAACAATCT+TGG | - | chr4.3:24113049-24113068 | MS.gene074599:CDS | 40.0% | |
| TTATGGCAAAGGAAGCTCAA+CGG | - | chr4.3:24112757-24112776 | MS.gene074599:intron | 40.0% | |
| TTGCATCCTCTAACTCTTGT+TGG | + | chr4.3:24112785-24112804 | None:intergenic | 40.0% | |
| ! | AGGTCAAACCAAGGAAGTTT+TGG | + | chr4.3:24111536-24111555 | None:intergenic | 40.0% |
| ! | CAAGGGACTGCAATTTTGAA+GGG | + | chr4.3:24111719-24111738 | None:intergenic | 40.0% |
| ! | CTCACGTATCCGTAAGTTTT+TGG | - | chr4.3:24111770-24111789 | MS.gene074599:CDS | 40.0% |
| ! | CTTTTGACATAAGTGATGCC+AGG | + | chr4.3:24111484-24111503 | None:intergenic | 40.0% |
| ! | TAGGCTTTCAAACTCTGAAG+CGG | - | chr4.3:24110974-24110993 | MS.gene074599:CDS | 40.0% |
| ! | TCAAGGGACTGCAATTTTGA+AGG | + | chr4.3:24111720-24111739 | None:intergenic | 40.0% |
| ! | TTTTGCAAAGATCCAAAGGG+AGG | - | chr4.3:24112704-24112723 | MS.gene074599:CDS | 40.0% |
| !! | AAAGTGTGATGGATGTGTGA+AGG | - | chr4.3:24112418-24112437 | MS.gene074599:CDS | 40.0% |
| !! | AACCCTATAAGTTGGTTGCA+AGG | + | chr4.3:24112007-24112026 | None:intergenic | 40.0% |
| !! | AAGGGACTGCAATTTTGAAG+GGG | + | chr4.3:24111718-24111737 | None:intergenic | 40.0% |
| !! | CTCTGGAGCAACATACTTTA+TGG | - | chr4.3:24110915-24110934 | MS.gene074599:CDS | 40.0% |
| !! | GGGTAATGGAAATGGAACAA+TGG | - | chr4.3:24111325-24111344 | MS.gene074599:intron | 40.0% |
| !! | TCTGAGTTGGGTAATGGAAA+TGG | - | chr4.3:24111317-24111336 | MS.gene074599:intron | 40.0% |
| !!! | AGTTTTGGACTTTTCTTGGC+AGG | + | chr4.3:24111521-24111540 | None:intergenic | 40.0% |
| !!! | ATTTTGAAGTCAACTGGCAC+AGG | + | chr4.3:24111386-24111405 | None:intergenic | 40.0% |
| !!! | TTTTGAAGTCAACTGGCACA+GGG | + | chr4.3:24111385-24111404 | None:intergenic | 40.0% |
| AACTGATCCTTCAGAAGGTG+TGG | - | chr4.3:24111842-24111861 | MS.gene074599:intron | 45.0% | |
| AAGGAAAAGAGTGAGGGAGA+CGG | + | chr4.3:24112678-24112697 | None:intergenic | 45.0% | |
| AGTGGAACTGATCCTTCAGA+AGG | - | chr4.3:24111837-24111856 | MS.gene074599:intron | 45.0% | |
| ATCTCAGGACCTAATACTGG+AGG | - | chr4.3:24111431-24111450 | MS.gene074599:intron | 45.0% | |
| CCAACTTATAGGGTTCTCTG+GGG | - | chr4.3:24112012-24112031 | MS.gene074599:CDS | 45.0% | |
| CCCATTCATCCATTGAGCAT+AGG | + | chr4.3:24111114-24111133 | None:intergenic | 45.0% | |
| GCAAGGATAAGGTCAAACCA+AGG | + | chr4.3:24111545-24111564 | None:intergenic | 45.0% | |
| GCATCGTTTCACGTCTATCA+AGG | + | chr4.3:24112737-24112756 | None:intergenic | 45.0% | |
| GCCTATGCTCAATGGATGAA+TGG | - | chr4.3:24111110-24111129 | MS.gene074599:intron | 45.0% | |
| GCTCTATCAGTCATTACAGG+AGG | - | chr4.3:24112161-24112180 | MS.gene074599:intron | 45.0% | |
| GGTGATCTCCAATATCTGCA+AGG | + | chr4.3:24111562-24111581 | None:intergenic | 45.0% | |
| GTCATCTCAGGACCTAATAC+TGG | - | chr4.3:24111428-24111447 | MS.gene074599:intron | 45.0% | |
| GTTGCAGGATTCTTTGCACT+TGG | + | chr4.3:24113131-24113150 | None:intergenic | 45.0% | |
| TATGGCAAAGGAAGCTCAAC+GGG | - | chr4.3:24112758-24112777 | MS.gene074599:intron | 45.0% | |
| TCTCAGGACCTAATACTGGA+GGG | - | chr4.3:24111432-24111451 | MS.gene074599:intron | 45.0% | |
| TCTGCGGGAACATGTTAACT+TGG | - | chr4.3:24111890-24111909 | MS.gene074599:CDS | 45.0% | |
| TGATAGAGCAAGTGAAGACC+TGG | - | chr4.3:24110699-24110718 | MS.gene074599:CDS | 45.0% | |
| TGCAGATATTGGAGATCACC+AGG | - | chr4.3:24111562-24111581 | MS.gene074599:CDS | 45.0% | |
| TTCAATGAAAACGTTGGGCC+TGG | - | chr4.3:24111463-24111482 | MS.gene074599:intron | 45.0% | |
| ! | AACTAGTTCTCCCACTCATC+AGG | - | chr4.3:24113148-24113167 | MS.gene074599:CDS | 45.0% |
| ! | ACTAGTTCTCCCACTCATCA+GGG | - | chr4.3:24113149-24113168 | MS.gene074599:CDS | 45.0% |
| ! | GCAGTTTTCCCTCCAGTATT+AGG | + | chr4.3:24111443-24111462 | None:intergenic | 45.0% |
| ! | TAGATCTGGAACTAGAGTGG+TGG | - | chr4.3:24111406-24111425 | MS.gene074599:intron | 45.0% |
| ! | TGCCGCAATGGAATTTTCAC+TGG | - | chr4.3:24111978-24111997 | MS.gene074599:CDS | 45.0% |
| !! | GCCGTTATTTCTGGGGAAAA+TGG | - | chr4.3:24112555-24112574 | MS.gene074599:CDS | 45.0% |
| !! | TGTTTTCTAGAGACGACTCC+AGG | + | chr4.3:24111262-24111281 | None:intergenic | 45.0% |
| !!! | CGTCTCAAATTTTTCGGGCT+GGG | - | chr4.3:24110785-24110804 | MS.gene074599:CDS | 45.0% |
| !!! | GTCTCAAATTTTTCGGGCTG+GGG | - | chr4.3:24110786-24110805 | MS.gene074599:CDS | 45.0% |
| !!! | TCGTCTCAAATTTTTCGGGC+TGG | - | chr4.3:24110784-24110803 | MS.gene074599:CDS | 45.0% |
| !!! | TCTCAAATTTTTCGGGCTGG+GGG | - | chr4.3:24110787-24110806 | MS.gene074599:CDS | 45.0% |
| AAAGCTCATACTCCTGCCGT+TGG | - | chr4.3:24112918-24112937 | MS.gene074599:CDS | 50.0% | |
| AACCAGAACAGCAGCAAGAG+CGG | - | chr4.3:24112130-24112149 | MS.gene074599:intron | 50.0% | |
| ACGGGTCCAACAAGAGTTAG+AGG | - | chr4.3:24112776-24112795 | MS.gene074599:intron | 50.0% | |
| ACTAGAGTGGTGGTCATCTC+AGG | - | chr4.3:24111416-24111435 | MS.gene074599:intron | 50.0% | |
| AGAGACGACTCCAGGAGTAA+TGG | + | chr4.3:24111254-24111273 | None:intergenic | 50.0% | |
| CAAGAGCTGCCTATGCTCAA+TGG | - | chr4.3:24111102-24111121 | MS.gene074599:intron | 50.0% | |
| CAAGTCCGTGTGAAGGGATT+GGG | - | chr4.3:24112996-24113015 | MS.gene074599:CDS | 50.0% | |
| CACAGTGGTAGAATTGCCTG+GGG | - | chr4.3:24113031-24113050 | MS.gene074599:CDS | 50.0% | |
| CCACAGTGGTAGAATTGCCT+GGG | - | chr4.3:24113030-24113049 | MS.gene074599:CDS | 50.0% | |
| CCCCAGAGAACCCTATAAGT+TGG | + | chr4.3:24112015-24112034 | None:intergenic | 50.0% | |
| GAAAGAGCCACACCTTCTGA+AGG | + | chr4.3:24111852-24111871 | None:intergenic | 50.0% | |
| GCAGGATTCTTTGCACTTGG+TGG | + | chr4.3:24113128-24113147 | None:intergenic | 50.0% | |
| GGGAGGAAAATTAGCCACAG+TGG | - | chr4.3:24113016-24113035 | MS.gene074599:CDS | 50.0% | |
| TAGAATGTGCGTGGGCATCA+GGG | - | chr4.3:24110843-24110862 | MS.gene074599:CDS | 50.0% | |
| TATGCGGCATCCATTACTCC+TGG | - | chr4.3:24111241-24111260 | MS.gene074599:intron | 50.0% | |
| TGACCATGCACAAAAGTGGG+TGG | - | chr4.3:24112098-24112117 | MS.gene074599:intron | 50.0% | |
| TGAGTGGGAGAACTAGTTGC+AGG | + | chr4.3:24113146-24113165 | None:intergenic | 50.0% | |
| TTCCTCCCAATCCCTTCACA+CGG | + | chr4.3:24113004-24113023 | None:intergenic | 50.0% | |
| ! | AGGGTTCTCTGGGGATGTAT+TGG | - | chr4.3:24112021-24112040 | MS.gene074599:CDS | 50.0% |
| ! | CGGACTTGCTCTCCAAATTG+TGG | + | chr4.3:24112984-24113003 | None:intergenic | 50.0% |
| ! | CGTCGATCTAGAATGTGCGT+GGG | - | chr4.3:24110835-24110854 | MS.gene074599:CDS | 50.0% |
| ! | GCTTCTAAAAGCGCGTCACA+AGG | - | chr4.3:24111347-24111366 | MS.gene074599:intron | 50.0% |
| !! | GGACTGCAATTTTGAAGGGG+AGG | + | chr4.3:24111715-24111734 | None:intergenic | 50.0% |
| !! | TCTCCACCCACTTTTGTGCA+TGG | + | chr4.3:24112104-24112123 | None:intergenic | 50.0% |
| AATGCGATCAGCGCCACTGA+TGG | + | chr4.3:24112949-24112968 | None:intergenic | 55.0% | |
| ATGCGATCAGCGCCACTGAT+GGG | + | chr4.3:24112948-24112967 | None:intergenic | 55.0% | |
| CAAGGTCTTCTGCCTCCCTT+TGG | + | chr4.3:24112719-24112738 | None:intergenic | 55.0% | |
| CAATGACATTGCGGTCGTGC+AGG | - | chr4.3:24111190-24111209 | MS.gene074599:intron | 55.0% | |
| CCCAGGCAATTCTACCACTG+TGG | + | chr4.3:24113033-24113052 | None:intergenic | 55.0% | |
| CTAGAATGTGCGTGGGCATC+AGG | - | chr4.3:24110842-24110861 | MS.gene074599:CDS | 55.0% | |
| CTTGGCAGGCAGATGCATTC+CGG | + | chr4.3:24111507-24111526 | None:intergenic | 55.0% | |
| GAGTGAGGGAGACGGATAGA+CGG | + | chr4.3:24112670-24112689 | None:intergenic | 55.0% | |
| GCAAGTCCGTGTGAAGGGAT+TGG | - | chr4.3:24112995-24113014 | MS.gene074599:CDS | 55.0% | |
| GCCACAGTGGTAGAATTGCC+TGG | - | chr4.3:24113029-24113048 | MS.gene074599:CDS | 55.0% | |
| GCCACTGATGGGAGAACCAA+CGG | + | chr4.3:24112937-24112956 | None:intergenic | 55.0% | |
| GGAGAGCAAGTCCGTGTGAA+GGG | - | chr4.3:24112990-24113009 | MS.gene074599:CDS | 55.0% | |
| GTATGTTGCTCCAGAGCTGC+TGG | + | chr4.3:24110911-24110930 | None:intergenic | 55.0% | |
| TCCCACTCATCAGGGAAAGC+AGG | - | chr4.3:24113157-24113176 | MS.gene074599:CDS | 55.0% | |
| TCTTGGCTATCCCCGAGGAT+TGG | + | chr4.3:24112486-24112505 | None:intergenic | 55.0% | |
| TGAGGCACGGCATGATGTGT+TGG | + | chr4.3:24112452-24112471 | None:intergenic | 55.0% | |
| TGGAGAGCAAGTCCGTGTGA+AGG | - | chr4.3:24112989-24113008 | MS.gene074599:CDS | 55.0% | |
| TGGGCATCAGGGCTTCGTAT+AGG | - | chr4.3:24110854-24110873 | MS.gene074599:CDS | 55.0% | |
| ! | GCGTCGATCTAGAATGTGCG+TGG | - | chr4.3:24110834-24110853 | MS.gene074599:CDS | 55.0% |
| ! | GTTCTGAATGCCAGCAGCTC+TGG | - | chr4.3:24110898-24110917 | MS.gene074599:CDS | 55.0% |
| !! | TTCAAACTCTGAAGCGGCCG+AGG | - | chr4.3:24110980-24110999 | MS.gene074599:CDS | 55.0% |
| ACAGCTCTTGGCTATCCCCG+AGG | + | chr4.3:24112491-24112510 | None:intergenic | 60.0% | |
| CTCCGCTCTTGCTGCTGTTC+TGG | + | chr4.3:24112135-24112154 | None:intergenic | 60.0% | |
| CTGATGGGAGAACCAACGGC+AGG | + | chr4.3:24112933-24112952 | None:intergenic | 60.0% | |
| GAACAGCAGCAAGAGCGGAG+AGG | - | chr4.3:24112135-24112154 | MS.gene074599:intron | 60.0% | |
| GTCCGTGTGAAGGGATTGGG+AGG | - | chr4.3:24112999-24113018 | MS.gene074599:CDS | 60.0% | |
| TCCTGCGCTCCAAGCCCATT+AGG | + | chr4.3:24110642-24110661 | None:intergenic | 60.0% | |
| !! | GCCGTTGGTTCTCCCATCAG+TGG | - | chr4.3:24112933-24112952 | MS.gene074599:CDS | 60.0% |
| !! | TCCTAATGGGCTTGGAGCGC+AGG | - | chr4.3:24110638-24110657 | MS.gene074599:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 24110599 | 24113178 | 24110599 | ID=MS.gene074599 |
| chr4.3 | mRNA | 24110599 | 24113178 | 24110599 | ID=MS.gene074599.t1;Parent=MS.gene074599 |
| chr4.3 | exon | 24112806 | 24113178 | 24112806 | ID=MS.gene074599.t1.exon1;Parent=MS.gene074599.t1 |
| chr4.3 | CDS | 24112806 | 24113178 | 24112806 | ID=cds.MS.gene074599.t1;Parent=MS.gene074599.t1 |
| chr4.3 | exon | 24112194 | 24112770 | 24112194 | ID=MS.gene074599.t1.exon2;Parent=MS.gene074599.t1 |
| chr4.3 | CDS | 24112194 | 24112770 | 24112194 | ID=cds.MS.gene074599.t1;Parent=MS.gene074599.t1 |
| chr4.3 | exon | 24111863 | 24112045 | 24111863 | ID=MS.gene074599.t1.exon3;Parent=MS.gene074599.t1 |
| chr4.3 | CDS | 24111863 | 24112045 | 24111863 | ID=cds.MS.gene074599.t1;Parent=MS.gene074599.t1 |
| chr4.3 | exon | 24111520 | 24111822 | 24111520 | ID=MS.gene074599.t1.exon4;Parent=MS.gene074599.t1 |
| chr4.3 | CDS | 24111520 | 24111822 | 24111520 | ID=cds.MS.gene074599.t1;Parent=MS.gene074599.t1 |
| chr4.3 | exon | 24110599 | 24111063 | 24110599 | ID=MS.gene074599.t1.exon5;Parent=MS.gene074599.t1 |
| chr4.3 | CDS | 24110599 | 24111063 | 24110599 | ID=cds.MS.gene074599.t1;Parent=MS.gene074599.t1 |
| Gene Sequence |
| Protein sequence |
