Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79722.t1 | XP_013444705.1 | 99.3 | 284 | 2 | 0 | 1 | 284 | 1 | 284 | 1.80E-152 | 548.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79722.t1 | Q9LSV0 | 82.1 | 285 | 50 | 1 | 1 | 284 | 1 | 285 | 1.4e-129 | 463.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79722.t1 | I3SHU4 | 99.3 | 284 | 2 | 0 | 1 | 284 | 1 | 284 | 1.3e-152 | 548.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene79722 | 0.840554 | 8.11E-58 | -1.69E-46 |
| MS.gene049356 | MS.gene79722 | 0.85894 | 5.83E-63 | -1.69E-46 |
| MS.gene049369 | MS.gene79722 | 0.85432 | 1.33E-61 | -1.69E-46 |
| MS.gene049427 | MS.gene79722 | 0.810046 | 1.40E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene79722 | 0.831731 | 1.41E-55 | -1.69E-46 |
| MS.gene049661 | MS.gene79722 | 0.827229 | 1.76E-54 | -1.69E-46 |
| MS.gene049662 | MS.gene79722 | 0.82331 | 1.48E-53 | -1.69E-46 |
| MS.gene049758 | MS.gene79722 | 0.829159 | 6.02E-55 | -1.69E-46 |
| MS.gene049805 | MS.gene79722 | 0.82681 | 2.21E-54 | -1.69E-46 |
| MS.gene049907 | MS.gene79722 | 0.821538 | 3.83E-53 | -1.69E-46 |
| MS.gene050076 | MS.gene79722 | 0.806006 | 1.01E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene79722 | 0.857528 | 1.54E-62 | -1.69E-46 |
| MS.gene050397 | MS.gene79722 | 0.832794 | 7.72E-56 | -1.69E-46 |
| MS.gene050432 | MS.gene79722 | 0.857272 | 1.83E-62 | -1.69E-46 |
| MS.gene050464 | MS.gene79722 | 0.806 | 1.02E-49 | -1.69E-46 |
| MS.gene050520 | MS.gene79722 | 0.842214 | 2.97E-58 | -1.69E-46 |
| MS.gene050593 | MS.gene79722 | 0.855592 | 5.69E-62 | -1.69E-46 |
| MS.gene050670 | MS.gene79722 | 0.873343 | 1.58E-67 | -1.69E-46 |
| MS.gene050686 | MS.gene79722 | 0.813527 | 2.45E-51 | -1.69E-46 |
| MS.gene050767 | MS.gene79722 | 0.813688 | 2.25E-51 | -1.69E-46 |
| MS.gene050770 | MS.gene79722 | 0.818197 | 2.22E-52 | -1.69E-46 |
| MS.gene050772 | MS.gene79722 | 0.835042 | 2.11E-56 | -1.69E-46 |
| MS.gene050971 | MS.gene79722 | 0.816101 | 6.58E-52 | -1.69E-46 |
| MS.gene05101 | MS.gene79722 | 0.827135 | 1.85E-54 | -1.69E-46 |
| MS.gene05105 | MS.gene79722 | 0.889318 | 2.70E-73 | -1.69E-46 |
| MS.gene051255 | MS.gene79722 | 0.843617 | 1.26E-58 | -1.69E-46 |
| MS.gene051360 | MS.gene79722 | 0.86563 | 5.14E-65 | -1.69E-46 |
| MS.gene051387 | MS.gene79722 | 0.871645 | 5.84E-67 | -1.69E-46 |
| MS.gene051525 | MS.gene79722 | 0.824687 | 7.05E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene79722 | 0.804093 | 2.55E-49 | -1.69E-46 |
| MS.gene051692 | MS.gene79722 | 0.825813 | 3.82E-54 | -1.69E-46 |
| MS.gene051858 | MS.gene79722 | 0.815445 | 9.21E-52 | -1.69E-46 |
| MS.gene051877 | MS.gene79722 | 0.820581 | 6.36E-53 | -1.69E-46 |
| MS.gene052078 | MS.gene79722 | 0.823417 | 1.40E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene79722 | 0.870489 | 1.40E-66 | -1.69E-46 |
| MS.gene052253 | MS.gene79722 | 0.834304 | 3.24E-56 | -1.69E-46 |
| MS.gene052310 | MS.gene79722 | 0.853772 | 1.92E-61 | -1.69E-46 |
| MS.gene052322 | MS.gene79722 | 0.824288 | 8.76E-54 | -1.69E-46 |
| MS.gene052326 | MS.gene79722 | 0.806783 | 6.96E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene79722 | 0.837018 | 6.66E-57 | -1.69E-46 |
| MS.gene052421 | MS.gene79722 | 0.862433 | 5.09E-64 | -1.69E-46 |
| MS.gene052481 | MS.gene79722 | 0.801882 | 7.30E-49 | -1.69E-46 |
| MS.gene052484 | MS.gene79722 | 0.832827 | 7.57E-56 | -1.69E-46 |
| MS.gene052485 | MS.gene79722 | 0.846527 | 2.05E-59 | -1.69E-46 |
| MS.gene052508 | MS.gene79722 | 0.81642 | 5.58E-52 | -1.69E-46 |
| MS.gene052510 | MS.gene79722 | 0.80753 | 4.83E-50 | -1.69E-46 |
| MS.gene052982 | MS.gene79722 | 0.804939 | 1.70E-49 | -1.69E-46 |
| MS.gene052999 | MS.gene79722 | 0.821968 | 3.04E-53 | -1.69E-46 |
| MS.gene053009 | MS.gene79722 | 0.800057 | 1.72E-48 | -1.69E-46 |
| MS.gene053103 | MS.gene79722 | 0.81886 | 1.57E-52 | -1.69E-46 |
| MS.gene053104 | MS.gene79722 | 0.820447 | 6.83E-53 | -1.69E-46 |
| MS.gene053169 | MS.gene79722 | 0.821012 | 5.06E-53 | -1.69E-46 |
| MS.gene05316 | MS.gene79722 | 0.802791 | 4.75E-49 | -1.69E-46 |
| MS.gene053207 | MS.gene79722 | 0.84702 | 1.51E-59 | -1.69E-46 |
| MS.gene053209 | MS.gene79722 | 0.899092 | 2.79E-77 | -1.69E-46 |
| MS.gene053322 | MS.gene79722 | 0.821967 | 3.05E-53 | -1.69E-46 |
| MS.gene053384 | MS.gene79722 | 0.806008 | 1.01E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene79722 | 0.852245 | 5.24E-61 | -1.69E-46 |
| MS.gene053574 | MS.gene79722 | 0.81168 | 6.20E-51 | -1.69E-46 |
| MS.gene053758 | MS.gene79722 | 0.840406 | 8.87E-58 | -1.69E-46 |
| MS.gene053813 | MS.gene79722 | 0.853636 | 2.10E-61 | -1.69E-46 |
| MS.gene053836 | MS.gene79722 | 0.813582 | 2.38E-51 | -1.69E-46 |
| MS.gene053912 | MS.gene79722 | 0.8275 | 1.51E-54 | -1.69E-46 |
| MS.gene053928 | MS.gene79722 | 0.807015 | 6.21E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene79722 | 0.838986 | 2.08E-57 | -1.69E-46 |
| MS.gene054376 | MS.gene79722 | 0.831478 | 1.63E-55 | -1.69E-46 |
| MS.gene054556 | MS.gene79722 | 0.822083 | 2.86E-53 | -1.69E-46 |
| MS.gene054802 | MS.gene79722 | 0.804686 | 1.92E-49 | -1.69E-46 |
| MS.gene054803 | MS.gene79722 | 0.804897 | 1.73E-49 | -1.69E-46 |
| MS.gene054804 | MS.gene79722 | 0.808703 | 2.72E-50 | -1.69E-46 |
| MS.gene054927 | MS.gene79722 | 0.804855 | 1.77E-49 | -1.69E-46 |
| MS.gene054955 | MS.gene79722 | 0.826694 | 2.36E-54 | -1.69E-46 |
| MS.gene05505 | MS.gene79722 | 0.860901 | 1.49E-63 | -1.69E-46 |
| MS.gene055116 | MS.gene79722 | 0.873601 | 1.30E-67 | -1.69E-46 |
| MS.gene055206 | MS.gene79722 | 0.803133 | 4.03E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene79722 | 0.853338 | 2.55E-61 | -1.69E-46 |
| MS.gene055390 | MS.gene79722 | 0.802493 | 5.47E-49 | -1.69E-46 |
| MS.gene055412 | MS.gene79722 | 0.805617 | 1.22E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene79722 | 0.829904 | 3.96E-55 | -1.69E-46 |
| MS.gene055499 | MS.gene79722 | 0.801386 | 9.23E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene79722 | 0.812031 | 5.20E-51 | -1.69E-46 |
| MS.gene055604 | MS.gene79722 | 0.805147 | 1.54E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene79722 | 0.805802 | 1.12E-49 | -1.69E-46 |
| MS.gene055647 | MS.gene79722 | 0.833422 | 5.38E-56 | -1.69E-46 |
| MS.gene055666 | MS.gene79722 | 0.8276 | 1.43E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene79722 | 0.843805 | 1.12E-58 | -1.69E-46 |
| MS.gene055909 | MS.gene79722 | 0.825497 | 4.54E-54 | -1.69E-46 |
| MS.gene055911 | MS.gene79722 | 0.828204 | 1.02E-54 | -1.69E-46 |
| MS.gene05592 | MS.gene79722 | 0.860837 | 1.56E-63 | -1.69E-46 |
| MS.gene055941 | MS.gene79722 | 0.804441 | 2.16E-49 | -1.69E-46 |
| MS.gene05602 | MS.gene79722 | 0.826369 | 2.82E-54 | -1.69E-46 |
| MS.gene056191 | MS.gene79722 | 0.83815 | 3.41E-57 | -1.69E-46 |
| MS.gene056407 | MS.gene79722 | 0.873363 | 1.56E-67 | -1.69E-46 |
| MS.gene056410 | MS.gene79722 | 0.879059 | 1.70E-69 | -1.69E-46 |
| MS.gene056422 | MS.gene79722 | 0.818659 | 1.75E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene79722 | 0.872982 | 2.09E-67 | -1.69E-46 |
| MS.gene056609 | MS.gene79722 | 0.852631 | 4.07E-61 | -1.69E-46 |
| MS.gene056612 | MS.gene79722 | 0.806908 | 6.54E-50 | -1.69E-46 |
| MS.gene05664 | MS.gene79722 | 0.80525 | 1.46E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene79722 | 0.819354 | 1.21E-52 | -1.69E-46 |
| MS.gene05666 | MS.gene79722 | 0.813673 | 2.27E-51 | -1.69E-46 |
| MS.gene056796 | MS.gene79722 | 0.806551 | 7.78E-50 | -1.69E-46 |
| MS.gene056897 | MS.gene79722 | 0.801719 | 7.89E-49 | -1.69E-46 |
| MS.gene056902 | MS.gene79722 | 0.814311 | 1.64E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene79722 | 0.814 | 1.93E-51 | -1.69E-46 |
| MS.gene05702 | MS.gene79722 | 0.830588 | 2.70E-55 | -1.69E-46 |
| MS.gene057076 | MS.gene79722 | 0.824126 | 9.56E-54 | -1.69E-46 |
| MS.gene057123 | MS.gene79722 | 0.804004 | 2.66E-49 | -1.69E-46 |
| MS.gene057124 | MS.gene79722 | 0.834253 | 3.34E-56 | -1.69E-46 |
| MS.gene057129 | MS.gene79722 | 0.800891 | 1.17E-48 | -1.69E-46 |
| MS.gene057146 | MS.gene79722 | 0.836413 | 9.49E-57 | -1.69E-46 |
| MS.gene057331 | MS.gene79722 | 0.856793 | 2.53E-62 | -1.69E-46 |
| MS.gene05735 | MS.gene79722 | 0.81641 | 5.61E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene79722 | 0.837968 | 3.80E-57 | -1.69E-46 |
| MS.gene057448 | MS.gene79722 | 0.845467 | 3.99E-59 | -1.69E-46 |
| MS.gene057449 | MS.gene79722 | 0.842474 | 2.53E-58 | -1.69E-46 |
| MS.gene057450 | MS.gene79722 | 0.852918 | 3.37E-61 | -1.69E-46 |
| MS.gene057734 | MS.gene79722 | 0.837436 | 5.20E-57 | -1.69E-46 |
| MS.gene057749 | MS.gene79722 | 0.840896 | 6.60E-58 | -1.69E-46 |
| MS.gene057823 | MS.gene79722 | 0.841537 | 4.48E-58 | -1.69E-46 |
| MS.gene057926 | MS.gene79722 | 0.808107 | 3.64E-50 | -1.69E-46 |
| MS.gene057927 | MS.gene79722 | 0.812076 | 5.08E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene79722 | 0.816817 | 4.55E-52 | -1.69E-46 |
| MS.gene058006 | MS.gene79722 | 0.820231 | 7.65E-53 | -1.69E-46 |
| MS.gene058007 | MS.gene79722 | 0.834532 | 2.84E-56 | -1.69E-46 |
| MS.gene058019 | MS.gene79722 | 0.835548 | 1.57E-56 | -1.69E-46 |
| MS.gene058082 | MS.gene79722 | 0.846481 | 2.11E-59 | -1.69E-46 |
| MS.gene05811 | MS.gene79722 | 0.831644 | 1.49E-55 | -1.69E-46 |
| MS.gene058120 | MS.gene79722 | 0.807267 | 5.50E-50 | -1.69E-46 |
| MS.gene058293 | MS.gene79722 | 0.842443 | 2.58E-58 | -1.69E-46 |
| MS.gene058323 | MS.gene79722 | 0.820262 | 7.53E-53 | -1.69E-46 |
| MS.gene058365 | MS.gene79722 | 0.828761 | 7.51E-55 | -1.69E-46 |
| MS.gene05842 | MS.gene79722 | 0.806961 | 6.38E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene79722 | 0.859654 | 3.56E-63 | -1.69E-46 |
| MS.gene058700 | MS.gene79722 | 0.863593 | 2.23E-64 | -1.69E-46 |
| MS.gene058787 | MS.gene79722 | 0.817539 | 3.13E-52 | -1.69E-46 |
| MS.gene05886 | MS.gene79722 | 0.842999 | 1.84E-58 | -1.69E-46 |
| MS.gene058928 | MS.gene79722 | 0.834979 | 2.19E-56 | -1.69E-46 |
| MS.gene058948 | MS.gene79722 | 0.838297 | 3.13E-57 | -1.69E-46 |
| MS.gene058949 | MS.gene79722 | 0.809601 | 1.75E-50 | -1.69E-46 |
| MS.gene058993 | MS.gene79722 | 0.806006 | 1.01E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene79722 | 0.865679 | 4.96E-65 | -1.69E-46 |
| MS.gene059366 | MS.gene79722 | 0.852043 | 5.98E-61 | -1.69E-46 |
| MS.gene059420 | MS.gene79722 | 0.819918 | 9.02E-53 | -1.69E-46 |
| MS.gene059455 | MS.gene79722 | 0.811092 | 8.32E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene79722 | 0.833396 | 5.46E-56 | -1.69E-46 |
| MS.gene059597 | MS.gene79722 | 0.836403 | 9.55E-57 | -1.69E-46 |
| MS.gene05959 | MS.gene79722 | 0.82872 | 7.68E-55 | -1.69E-46 |
| MS.gene059674 | MS.gene79722 | 0.847725 | 9.64E-60 | -1.69E-46 |
| MS.gene059676 | MS.gene79722 | 0.897804 | 9.85E-77 | -1.69E-46 |
| MS.gene059688 | MS.gene79722 | 0.890169 | 1.26E-73 | -1.69E-46 |
| MS.gene059692 | MS.gene79722 | 0.888037 | 8.42E-73 | -1.69E-46 |
| MS.gene059695 | MS.gene79722 | 0.8897 | 1.92E-73 | -1.69E-46 |
| MS.gene059711 | MS.gene79722 | 0.888422 | 5.99E-73 | -1.69E-46 |
| MS.gene059807 | MS.gene79722 | 0.827638 | 1.40E-54 | -1.69E-46 |
| MS.gene05984 | MS.gene79722 | 0.809854 | 1.54E-50 | -1.69E-46 |
| MS.gene05986 | MS.gene79722 | 0.837034 | 6.60E-57 | -1.69E-46 |
| MS.gene059894 | MS.gene79722 | 0.808027 | 3.79E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene79722 | 0.809751 | 1.62E-50 | -1.69E-46 |
| MS.gene059960 | MS.gene79722 | 0.825713 | 4.04E-54 | -1.69E-46 |
| MS.gene059974 | MS.gene79722 | 0.835105 | 2.04E-56 | -1.69E-46 |
| MS.gene060005 | MS.gene79722 | 0.805825 | 1.11E-49 | -1.69E-46 |
| MS.gene060193 | MS.gene79722 | 0.83132 | 1.78E-55 | -1.69E-46 |
| MS.gene060356 | MS.gene79722 | 0.805181 | 1.51E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene79722 | 0.840841 | 6.82E-58 | -1.69E-46 |
| MS.gene060403 | MS.gene79722 | 0.844319 | 8.14E-59 | -1.69E-46 |
| MS.gene060496 | MS.gene79722 | 0.81257 | 3.97E-51 | -1.69E-46 |
| MS.gene060569 | MS.gene79722 | 0.805924 | 1.06E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene79722 | 0.869542 | 2.86E-66 | -1.69E-46 |
| MS.gene060818 | MS.gene79722 | 0.839273 | 1.75E-57 | -1.69E-46 |
| MS.gene060835 | MS.gene79722 | 0.839308 | 1.71E-57 | -1.69E-46 |
| MS.gene060837 | MS.gene79722 | 0.887629 | 1.21E-72 | -1.69E-46 |
| MS.gene061041 | MS.gene79722 | 0.841187 | 5.53E-58 | -1.69E-46 |
| MS.gene061049 | MS.gene79722 | 0.8404 | 8.90E-58 | -1.69E-46 |
| MS.gene061051 | MS.gene79722 | -0.862632 | 4.42E-64 | -1.69E-46 |
| MS.gene061154 | MS.gene79722 | 0.854306 | 1.34E-61 | -1.69E-46 |
| MS.gene061200 | MS.gene79722 | 0.838883 | 2.21E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene79722 | MS.gene27946 | PPI |
| MS.gene003315 | MS.gene79722 | PPI |
| MS.gene03058 | MS.gene79722 | PPI |
| MS.gene47905 | MS.gene79722 | PPI |
| MS.gene79722 | MS.gene85223 | PPI |
| MS.gene79722 | MS.gene051949 | PPI |
| MS.gene05985 | MS.gene79722 | PPI |
| MS.gene015821 | MS.gene79722 | PPI |
| MS.gene74531 | MS.gene79722 | PPI |
| MS.gene049066 | MS.gene79722 | PPI |
| MS.gene030927 | MS.gene79722 | PPI |
| MS.gene67218 | MS.gene79722 | PPI |
| MS.gene057011 | MS.gene79722 | PPI |
| MS.gene02110 | MS.gene79722 | PPI |
| MS.gene76149 | MS.gene79722 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79722.t1 | MTR_8g028120 | 99.296 | 284 | 2 | 0 | 1 | 284 | 1 | 284 | 0.0 | 568 |
| MS.gene79722.t1 | MTR_2g099910 | 56.690 | 284 | 122 | 1 | 2 | 284 | 47 | 330 | 3.55e-111 | 325 |
| MS.gene79722.t1 | MTR_2g099910 | 56.863 | 204 | 87 | 1 | 2 | 204 | 47 | 250 | 4.24e-76 | 232 |
| MS.gene79722.t1 | MTR_2g099910 | 57.062 | 177 | 75 | 1 | 2 | 177 | 47 | 223 | 6.55e-65 | 203 |
| MS.gene79722.t1 | MTR_8g102470 | 30.000 | 280 | 193 | 3 | 2 | 279 | 13 | 291 | 3.63e-40 | 142 |
| MS.gene79722.t1 | MTR_8g102470 | 30.000 | 280 | 193 | 3 | 2 | 279 | 37 | 315 | 5.41e-40 | 142 |
| MS.gene79722.t1 | MTR_8g088900 | 29.391 | 279 | 190 | 4 | 2 | 274 | 15 | 292 | 2.39e-33 | 125 |
| MS.gene79722.t1 | MTR_2g030400 | 28.283 | 297 | 193 | 4 | 2 | 278 | 41 | 337 | 2.10e-26 | 106 |
| MS.gene79722.t1 | MTR_2g030400 | 31.818 | 220 | 137 | 3 | 2 | 208 | 41 | 260 | 4.13e-26 | 104 |
| MS.gene79722.t1 | MTR_2g030400 | 31.818 | 220 | 137 | 3 | 2 | 208 | 41 | 260 | 5.86e-26 | 104 |
| MS.gene79722.t1 | MTR_2g030400 | 31.818 | 220 | 137 | 3 | 2 | 208 | 41 | 260 | 7.73e-26 | 104 |
| MS.gene79722.t1 | MTR_6g069685 | 26.621 | 293 | 200 | 6 | 2 | 283 | 326 | 614 | 2.58e-19 | 88.2 |
| MS.gene79722.t1 | MTR_6g069685 | 25.461 | 271 | 181 | 5 | 3 | 261 | 7 | 268 | 3.44e-16 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79722.t1 | AT3G25530 | 82.105 | 285 | 50 | 1 | 1 | 284 | 1 | 285 | 6.36e-173 | 479 |
| MS.gene79722.t1 | AT3G25530 | 78.521 | 284 | 51 | 1 | 1 | 284 | 1 | 274 | 5.95e-164 | 456 |
| MS.gene79722.t1 | AT3G25530 | 81.463 | 205 | 37 | 1 | 1 | 204 | 1 | 205 | 3.54e-122 | 348 |
| MS.gene79722.t1 | AT1G17650 | 57.895 | 285 | 119 | 1 | 1 | 284 | 8 | 292 | 5.59e-113 | 328 |
| MS.gene79722.t1 | AT1G17650 | 57.895 | 285 | 119 | 1 | 1 | 284 | 67 | 351 | 1.74e-112 | 329 |
| MS.gene79722.t1 | AT4G29120 | 31.071 | 280 | 190 | 3 | 2 | 279 | 39 | 317 | 2.13e-38 | 138 |
| MS.gene79722.t1 | AT4G20930 | 32.886 | 298 | 178 | 6 | 3 | 279 | 40 | 336 | 9.56e-32 | 120 |
| MS.gene79722.t1 | AT1G18270 | 29.054 | 296 | 189 | 8 | 2 | 283 | 323 | 611 | 6.14e-24 | 102 |
| MS.gene79722.t1 | AT1G18270 | 24.364 | 275 | 203 | 4 | 3 | 273 | 5 | 278 | 9.41e-16 | 77.8 |
| MS.gene79722.t1 | AT1G18270 | 29.054 | 296 | 189 | 8 | 2 | 283 | 323 | 611 | 6.61e-24 | 102 |
| MS.gene79722.t1 | AT1G18270 | 24.364 | 275 | 203 | 4 | 3 | 273 | 5 | 278 | 1.09e-15 | 77.8 |
| MS.gene79722.t1 | AT1G18270 | 29.054 | 296 | 189 | 8 | 2 | 283 | 324 | 612 | 6.61e-24 | 102 |
| MS.gene79722.t1 | AT1G18270 | 24.275 | 276 | 203 | 5 | 3 | 273 | 5 | 279 | 3.85e-14 | 73.2 |
| MS.gene79722.t1 | AT1G18270 | 29.054 | 296 | 189 | 8 | 2 | 283 | 323 | 611 | 7.01e-24 | 101 |
| MS.gene79722.t1 | AT1G18270 | 24.364 | 275 | 203 | 4 | 3 | 273 | 5 | 278 | 1.09e-15 | 77.8 |
| MS.gene79722.t1 | AT4G20930 | 31.298 | 262 | 158 | 6 | 39 | 279 | 4 | 264 | 9.76e-23 | 95.1 |
| MS.gene79722.t1 | AT1G71170 | 27.076 | 277 | 196 | 3 | 9 | 284 | 22 | 293 | 1.19e-17 | 81.6 |
| MS.gene79722.t1 | AT1G71180 | 25.862 | 232 | 170 | 2 | 9 | 239 | 43 | 273 | 8.26e-16 | 76.6 |
Find 67 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGAAAGAAATCTTTCTTTC+TGG | 0.164012 | 8.4:-67848232 | MS.gene79722:CDS |
| TTTAAACATGCCGTTACTTA+TGG | 0.260989 | 8.4:+67847476 | None:intergenic |
| TTTCTTGAAGCTCCTGTTTC+GGG | 0.271355 | 8.4:-67849575 | MS.gene79722:CDS |
| GTCTCCCAACCCCATGCTTC+TGG | 0.280528 | 8.4:+67847012 | None:intergenic |
| GGTGTTCTTGAGCAAATTAA+TGG | 0.309456 | 8.4:-67850285 | MS.gene79722:CDS |
| CTTTCTTGAAGCTCCTGTTT+CGG | 0.310097 | 8.4:-67849576 | MS.gene79722:CDS |
| GGAAAGAAATCTTTCTTTCT+GGG | 0.319830 | 8.4:-67848231 | MS.gene79722:CDS |
| ATCCGATCCTGCAGCTGCTT+TGG | 0.356413 | 8.4:-67850415 | MS.gene79722:CDS |
| CTTTGAAGCCATGGCGTAGA+AGG | 0.398102 | 8.4:+67850757 | None:intergenic |
| TTTCTGGGTGAGGTTGGAAA+TGG | 0.402461 | 8.4:-67848216 | MS.gene79722:CDS |
| CTTGTTGTCAACATGGTAAT+GGG | 0.402762 | 8.4:-67848180 | MS.gene79722:CDS |
| ATGGCTTCAAAGTCACTGTT+TGG | 0.409650 | 8.4:-67850746 | MS.gene79722:CDS |
| CTTGAGCAAATTAATGGAAA+AGG | 0.410887 | 8.4:-67850279 | MS.gene79722:CDS |
| TTGGAACAGAACCCTCTCTA+AGG | 0.431030 | 8.4:-67850727 | MS.gene79722:intron |
| GCTGCAGCTGCGACAGGCAT+TGG | 0.436252 | 8.4:+67847345 | None:intergenic |
| TCATTTGCTGCAGCTGCGAC+AGG | 0.445970 | 8.4:+67847339 | None:intergenic |
| GAAATCTTTCTTTCTGGGTG+AGG | 0.451195 | 8.4:-67848226 | MS.gene79722:CDS |
| CGCCAAAGCAGCTGCAGGAT+CGG | 0.451480 | 8.4:+67850413 | None:intergenic |
| TCTTTCTTTCTGGGTGAGGT+TGG | 0.457974 | 8.4:-67848222 | MS.gene79722:CDS |
| GGCTTCTTACTACCCGAAAC+AGG | 0.467901 | 8.4:+67849563 | None:intergenic |
| CGATCCTGCAGCTGCTTTGG+CGG | 0.468605 | 8.4:-67850412 | MS.gene79722:intron |
| AACGGCATGTTTAAATTGAA+AGG | 0.477158 | 8.4:-67847468 | MS.gene79722:CDS |
| ATGAGACTGGCTCTTGCCCT+TGG | 0.477610 | 8.4:-67847384 | MS.gene79722:CDS |
| AAAGCCAGAAGCATGGGGTT+GGG | 0.482519 | 8.4:-67847016 | MS.gene79722:CDS |
| CTGACCGCCAAAGCAGCTGC+AGG | 0.484117 | 8.4:+67850408 | None:intergenic |
| ACTAGTTGGCCATCTTCTGC+AGG | 0.484133 | 8.4:+67849542 | None:intergenic |
| TTCAAGAAAGCCAGAAGCAT+GGG | 0.486636 | 8.4:-67847022 | MS.gene79722:CDS |
| TGATGTTTCAGTGGAAAAGC+AGG | 0.487430 | 8.4:+67847417 | None:intergenic |
| GAAAGCCAGAAGCATGGGGT+TGG | 0.500182 | 8.4:-67847017 | MS.gene79722:CDS |
| ACTTGTTGTCAACATGGTAA+TGG | 0.503001 | 8.4:-67848181 | MS.gene79722:CDS |
| TAGCACACTTCTTGATGTGC+TGG | 0.506743 | 8.4:-67847586 | MS.gene79722:intron |
| CTGATTGTAGTGTGATGAAC+TGG | 0.507267 | 8.4:-67850511 | MS.gene79722:intron |
| AGTAAGAAGCCTGCAGAAGA+TGG | 0.513694 | 8.4:-67849551 | MS.gene79722:CDS |
| TTTCCGAGTACATCAAATGC+TGG | 0.514724 | 8.4:+67848249 | None:intergenic |
| CTTCCAGCATTTGATGTACT+CGG | 0.515625 | 8.4:-67848252 | MS.gene79722:CDS |
| TAGGTTGTGTTTGATAAGGA+TGG | 0.515687 | 8.4:-67850306 | MS.gene79722:CDS |
| CACTTCTTGACAACAGCCGC+AGG | 0.522756 | 8.4:+67850459 | None:intergenic |
| CTACAGGCAATCAAAGCAAA+AGG | 0.523095 | 8.4:-67849605 | MS.gene79722:intron |
| TGTCGCAGCTGCAGCAAATG+AGG | 0.525255 | 8.4:-67847337 | MS.gene79722:intron |
| CGGCAGCAAGTATAACTAGT+TGG | 0.527224 | 8.4:+67849528 | None:intergenic |
| ATGATGAATGCTTTCTCTGA+GGG | 0.550025 | 8.4:-67847642 | MS.gene79722:CDS |
| AAACAGTGACTTTGAAGCCA+TGG | 0.555473 | 8.4:+67850748 | None:intergenic |
| TCCTTCTGCTGATGTTTCAG+TGG | 0.571359 | 8.4:+67847408 | None:intergenic |
| TAGGTTATGTACCTTAGAGA+GGG | 0.578481 | 8.4:+67850716 | None:intergenic |
| ATTCAAGAAAGCCAGAAGCA+TGG | 0.581643 | 8.4:-67847023 | MS.gene79722:CDS |
| GATCTTGGGGCCATAAGTAA+CGG | 0.585908 | 8.4:-67847486 | MS.gene79722:CDS |
| TCAATTAACCTTCTACGCCA+TGG | 0.586100 | 8.4:-67850765 | MS.gene79722:CDS |
| TTAGGTTATGTACCTTAGAG+AGG | 0.588459 | 8.4:+67850715 | None:intergenic |
| GTGGAACATGGTGCTTCAGT+TGG | 0.589772 | 8.4:-67850489 | MS.gene79722:CDS |
| GCGTAGAAGGTTAATTGACA+TGG | 0.590455 | 8.4:+67850770 | None:intergenic |
| TCCACTGAAACATCAGCAGA+AGG | 0.591596 | 8.4:-67847409 | MS.gene79722:CDS |
| CAACTAGTTATACTTGCTGC+CGG | 0.591719 | 8.4:-67849527 | MS.gene79722:CDS |
| CTGACACTTGCTGAAAGAAG+TGG | 0.597037 | 8.4:-67847618 | MS.gene79722:CDS |
| TCAGCAGAAGGACATGAGAC+TGG | 0.601633 | 8.4:-67847397 | MS.gene79722:CDS |
| TATACTTGCTGCCGGAGACA+AGG | 0.610187 | 8.4:-67849519 | MS.gene79722:intron |
| GATGTTTCAGTGGAAAAGCA+GGG | 0.610233 | 8.4:+67847418 | None:intergenic |
| AGCACATCAAGAAGTGTGCT+AGG | 0.618693 | 8.4:+67847588 | None:intergenic |
| AATGAAACTTGTTGTCAACA+TGG | 0.623343 | 8.4:-67848187 | MS.gene79722:CDS |
| GACATCTATCAAGATATCTG+AGG | 0.630486 | 8.4:-67850226 | MS.gene79722:intron |
| TTGTCAACATGGTAATGGGA+AGG | 0.637666 | 8.4:-67848176 | MS.gene79722:intron |
| TATGATGAATGCTTTCTCTG+AGG | 0.646238 | 8.4:-67847643 | MS.gene79722:CDS |
| ATTGTAGTGTGATGAACTGG+TGG | 0.655662 | 8.4:-67850508 | MS.gene79722:intron |
| TGTGATGAACTGGTGGAACA+TGG | 0.661566 | 8.4:-67850501 | MS.gene79722:CDS |
| ATGTTTCAGTGGAAAAGCAG+GGG | 0.666554 | 8.4:+67847419 | None:intergenic |
| CAGGCAATCAAAGCAAAAGG+TGG | 0.667806 | 8.4:-67849602 | MS.gene79722:CDS |
| TCAAGAAAGCCAGAAGCATG+GGG | 0.690032 | 8.4:-67847021 | MS.gene79722:CDS |
| TTCAGTTGGAGAAACACCTG+CGG | 0.737303 | 8.4:-67850475 | MS.gene79722:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGTTATTTATCAAAAACA+CGG | + | chr8.4:67849745-67849764 | None:intergenic | 15.0% |
| !! | ACATACACTAAAAAATGATA+TGG | + | chr8.4:67848830-67848849 | None:intergenic | 20.0% |
| !! | ATTCTCAGAATGTTAATAAA+AGG | + | chr8.4:67850260-67850279 | None:intergenic | 20.0% |
| !! | CCATATAAATTAAATTTCAG+TGG | - | chr8.4:67849475-67849494 | MS.gene79722:intron | 20.0% |
| !! | CTAATCTGAATTTATCTAAT+AGG | + | chr8.4:67849993-67850012 | None:intergenic | 20.0% |
| !! | CTTAAAAAAGAAACTTTCAA+TGG | + | chr8.4:67847782-67847801 | None:intergenic | 20.0% |
| !! | GAAAATAAAGTTGTTAGAAA+AGG | - | chr8.4:67848716-67848735 | MS.gene79722:intron | 20.0% |
| !! | TAAGTTGCAATTTATATCAA+AGG | + | chr8.4:67848145-67848164 | None:intergenic | 20.0% |
| !! | TATAAATTAAATTTCAGTGG+TGG | - | chr8.4:67849478-67849497 | MS.gene79722:intron | 20.0% |
| !! | TTCAATAATGCAATCTAAAA+TGG | + | chr8.4:67848668-67848687 | None:intergenic | 20.0% |
| !! | TTTAGATTGCATTATTGAAA+AGG | - | chr8.4:67848669-67848688 | MS.gene79722:intron | 20.0% |
| !!! | ATATCTGTGATATTTTTTGA+AGG | - | chr8.4:67850278-67850297 | MS.gene79722:CDS | 20.0% |
| !!! | CATTGAAAGTTTCTTTTTTA+AGG | - | chr8.4:67847780-67847799 | MS.gene79722:intron | 20.0% |
| !!! | CCACTGAAATTTAATTTATA+TGG | + | chr8.4:67849478-67849497 | None:intergenic | 20.0% |
| !!! | TGCAGTTATTATTTTGAATT+TGG | - | chr8.4:67847756-67847775 | MS.gene79722:intron | 20.0% |
| !!! | TTGTAGTTTTTCATTTTGAA+CGG | + | chr8.4:67849440-67849459 | None:intergenic | 20.0% |
| ! | AAAGTAATACTTCAGATAGA+AGG | + | chr8.4:67848457-67848476 | None:intergenic | 25.0% |
| ! | AGAGAGTAGATTTATTGTAT+AGG | + | chr8.4:67849370-67849389 | None:intergenic | 25.0% |
| ! | AGTAGATTTATTGTATAGGA+GGG | + | chr8.4:67849366-67849385 | None:intergenic | 25.0% |
| ! | ATACAATAAATCTACTCTCT+AGG | - | chr8.4:67849370-67849389 | MS.gene79722:intron | 25.0% |
| ! | ATTTAAAAATACCTTGTCTC+CGG | + | chr8.4:67848281-67848300 | None:intergenic | 25.0% |
| ! | CATAAGCTTTCATATGATAA+AGG | - | chr8.4:67849148-67849167 | MS.gene79722:intron | 25.0% |
| ! | CGCATGTATATATTATAATG+AGG | - | chr8.4:67850504-67850523 | MS.gene79722:CDS | 25.0% |
| ! | CTAAAATATTCAACACGAAA+CGG | + | chr8.4:67847463-67847482 | None:intergenic | 25.0% |
| ! | CTTTATCATATGAAAGCTTA+TGG | + | chr8.4:67849150-67849169 | None:intergenic | 25.0% |
| ! | GAATTGAACCAATTTAAACA+AGG | + | chr8.4:67848877-67848896 | None:intergenic | 25.0% |
| ! | GCATATATTCAAACATTCTA+CGG | + | chr8.4:67847941-67847960 | None:intergenic | 25.0% |
| ! | GCATATTAGCATTTCTTATT+TGG | - | chr8.4:67850045-67850064 | MS.gene79722:intron | 25.0% |
| ! | GTCTGTTGAAAGTTATTTAA+TGG | - | chr8.4:67850537-67850556 | MS.gene79722:intron | 25.0% |
| ! | GTTCTGTATTTATGAATCAA+TGG | - | chr8.4:67848018-67848037 | MS.gene79722:intron | 25.0% |
| ! | TAATGAGATGACAATAAATG+TGG | - | chr8.4:67848546-67848565 | MS.gene79722:intron | 25.0% |
| ! | TAATTCTCGCATTCAAAATT+AGG | + | chr8.4:67847884-67847903 | None:intergenic | 25.0% |
| ! | TACGTCTCTTCTATATAAAA+GGG | + | chr8.4:67849083-67849102 | None:intergenic | 25.0% |
| ! | TCATTACAGTTTAGTCTATT+TGG | + | chr8.4:67849301-67849320 | None:intergenic | 25.0% |
| ! | TGAATCAGAAAACAAGAAAA+TGG | - | chr8.4:67849719-67849738 | MS.gene79722:intron | 25.0% |
| ! | TTAAAATGAAATCGAAAAGC+TGG | + | chr8.4:67848805-67848824 | None:intergenic | 25.0% |
| ! | TTAAGTACGAGAAAACAAAT+CGG | + | chr8.4:67847437-67847456 | None:intergenic | 25.0% |
| ! | TTTCTATATAGAACTACTTG+TGG | - | chr8.4:67847204-67847223 | MS.gene79722:intron | 25.0% |
| !! | TATCTGATAGTCACATATTT+TGG | + | chr8.4:67850669-67850688 | None:intergenic | 25.0% |
| !! | TATTACTTTAAGTTCCCAAA+AGG | - | chr8.4:67848468-67848487 | MS.gene79722:intron | 25.0% |
| !!! | ATATTTTTTGAAGGATCTTG+GGG | - | chr8.4:67850287-67850306 | MS.gene79722:CDS | 25.0% |
| !!! | ATGATAATCGACTTTTCAAA+TGG | - | chr8.4:67848105-67848124 | MS.gene79722:intron | 25.0% |
| !!! | ATTTTAGGTTGTGTTTGATA+AGG | - | chr8.4:67847476-67847495 | MS.gene79722:CDS | 25.0% |
| !!! | GATATTTTTTGAAGGATCTT+GGG | - | chr8.4:67850286-67850305 | MS.gene79722:CDS | 25.0% |
| !!! | TAACTGTTTTTAAGCATTGT+TGG | + | chr8.4:67850345-67850364 | None:intergenic | 25.0% |
| !!! | TGATATTTTTTGAAGGATCT+TGG | - | chr8.4:67850285-67850304 | MS.gene79722:CDS | 25.0% |
| !!! | TGCTTAAGTAAGTTTTGTAT+TGG | - | chr8.4:67847177-67847196 | MS.gene79722:intron | 25.0% |
| AAACTAAGTTGCTACAGTAA+CGG | + | chr8.4:67848905-67848924 | None:intergenic | 30.0% | |
| AACGGCATGTTTAAATTGAA+AGG | - | chr8.4:67850318-67850337 | MS.gene79722:intron | 30.0% | |
| ACAAATCATGTACAGTAATC+AGG | + | chr8.4:67849343-67849362 | None:intergenic | 30.0% | |
| ACATCAAGGATAAATTTAGC+AGG | + | chr8.4:67847406-67847425 | None:intergenic | 30.0% | |
| ACCGCATAAATACAATTACA+AGG | + | chr8.4:67849026-67849045 | None:intergenic | 30.0% | |
| ACTTAGTCAAAGAAATGTAG+TGG | + | chr8.4:67848000-67848019 | None:intergenic | 30.0% | |
| ACTTCCAAATTATGAACAGA+AGG | + | chr8.4:67849656-67849675 | None:intergenic | 30.0% | |
| AGAAATGCTAATATGCAATC+TGG | + | chr8.4:67850041-67850060 | None:intergenic | 30.0% | |
| ATATGCAATCTGGATGAATT+TGG | + | chr8.4:67850031-67850050 | None:intergenic | 30.0% | |
| CAATCTACGAAAAAGAGAAA+AGG | + | chr8.4:67847644-67847663 | None:intergenic | 30.0% | |
| CTACGTCTCTTCTATATAAA+AGG | + | chr8.4:67849084-67849103 | None:intergenic | 30.0% | |
| CTTGAGCAAATTAATGGAAA+AGG | - | chr8.4:67847507-67847526 | MS.gene79722:intron | 30.0% | |
| GAAAATAAAGACATGCAATC+TGG | + | chr8.4:67850078-67850097 | None:intergenic | 30.0% | |
| GAGTAGATTTATTGTATAGG+AGG | + | chr8.4:67849367-67849386 | None:intergenic | 30.0% | |
| GCCTTGTAATTGTATTTATG+CGG | - | chr8.4:67849022-67849041 | MS.gene79722:intron | 30.0% | |
| GGAAAGAAATCTTTCTTTCT+GGG | - | chr8.4:67849555-67849574 | MS.gene79722:CDS | 30.0% | |
| GGAAATATGAAAACATCCTA+TGG | - | chr8.4:67849896-67849915 | MS.gene79722:intron | 30.0% | |
| GTAACTACATTTGCATATCA+AGG | - | chr8.4:67848050-67848069 | MS.gene79722:intron | 30.0% | |
| TAAAGTTTGAACTCGTTTGT+AGG | - | chr8.4:67850739-67850758 | MS.gene79722:CDS | 30.0% | |
| TATGAACAGAAGGAGAAAAA+GGG | + | chr8.4:67849646-67849665 | None:intergenic | 30.0% | |
| TATGCAATCTGGATGAATTT+GGG | + | chr8.4:67850030-67850049 | None:intergenic | 30.0% | |
| TCTGTTCATAATTTGGAAGT+AGG | - | chr8.4:67849656-67849675 | MS.gene79722:intron | 30.0% | |
| TGAACCAATTTAAACAAGGT+TGG | + | chr8.4:67848873-67848892 | None:intergenic | 30.0% | |
| TGTATTTATGCGGTTATAGT+AGG | - | chr8.4:67849032-67849051 | MS.gene79722:intron | 30.0% | |
| TTATGAACAGAAGGAGAAAA+AGG | + | chr8.4:67849647-67849666 | None:intergenic | 30.0% | |
| TTCAATTAAAGCCTAATGAG+AGG | + | chr8.4:67849251-67849270 | None:intergenic | 30.0% | |
| TTCATAATTTGGAAGTAGGA+AGG | - | chr8.4:67849660-67849679 | MS.gene79722:intron | 30.0% | |
| TTCTCCTTCTGTTCATAATT+TGG | - | chr8.4:67849649-67849668 | MS.gene79722:intron | 30.0% | |
| TTGTAGCATTCATAGTTAGA+TGG | - | chr8.4:67850610-67850629 | MS.gene79722:intron | 30.0% | |
| TTTAAACATGCCGTTACTTA+TGG | + | chr8.4:67850313-67850332 | None:intergenic | 30.0% | |
| ! | AATGCCAACCTTGTTTAAAT+TGG | - | chr8.4:67848866-67848885 | MS.gene79722:intron | 30.0% |
| ! | ATAGTACTGGAGATTATGTT+TGG | - | chr8.4:67847826-67847845 | MS.gene79722:intron | 30.0% |
| ! | ATTCCAGTGTATTTCCTTTT+GGG | + | chr8.4:67848485-67848504 | None:intergenic | 30.0% |
| ! | CGAAAAAGAGAAAAGGATTT+TGG | + | chr8.4:67847637-67847656 | None:intergenic | 30.0% |
| ! | CGTTTCGTGTTGAATATTTT+AGG | - | chr8.4:67847461-67847480 | MS.gene79722:CDS | 30.0% |
| ! | CTCATTAGGCTTTAATTGAA+GGG | - | chr8.4:67849251-67849270 | MS.gene79722:intron | 30.0% |
| ! | TAATGCAATCTAAAATGGAC+TGG | + | chr8.4:67848663-67848682 | None:intergenic | 30.0% |
| ! | TCTCATTAGGCTTTAATTGA+AGG | - | chr8.4:67849250-67849269 | MS.gene79722:intron | 30.0% |
| !! | AATGAAACTTGTTGTCAACA+TGG | - | chr8.4:67849599-67849618 | MS.gene79722:CDS | 30.0% |
| !! | ATCGACTTTTCAAATGGAAT+TGG | - | chr8.4:67848111-67848130 | MS.gene79722:intron | 30.0% |
| !!! | AGATTGGATTTTTAGGTTTG+GGG | - | chr8.4:67846980-67846999 | MS.gene79722:CDS | 30.0% |
| !!! | ATTTTTAGGTTTGGGGATAA+TGG | - | chr8.4:67846987-67847006 | MS.gene79722:CDS | 30.0% |
| !!! | GAGATTGGATTTTTAGGTTT+GGG | - | chr8.4:67846979-67846998 | MS.gene79722:CDS | 30.0% |
| !!! | TTTTTAGGTTTGGGGATAAT+GGG | - | chr8.4:67846988-67847007 | MS.gene79722:CDS | 30.0% |
| AAAACACACACTCGTTTGAA+AGG | + | chr8.4:67848427-67848446 | None:intergenic | 35.0% | |
| ATATTCAAACATTCTACGGC+AGG | + | chr8.4:67847937-67847956 | None:intergenic | 35.0% | |
| ATGATGAATGCTTTCTCTGA+GGG | - | chr8.4:67850144-67850163 | MS.gene79722:intron | 35.0% | |
| CGGAAAGAAATCTTTCTTTC+TGG | - | chr8.4:67849554-67849573 | MS.gene79722:CDS | 35.0% | |
| CTCTTCTATATAAAAGGGAG+CGG | + | chr8.4:67849078-67849097 | None:intergenic | 35.0% | |
| GAATAGTGCAACTCTCTAAA+TGG | + | chr8.4:67848365-67848384 | None:intergenic | 35.0% | |
| GACATCTATCAAGATATCTG+AGG | - | chr8.4:67847560-67847579 | MS.gene79722:intron | 35.0% | |
| GGCAAGTATAACACTTCAAA+TGG | + | chr8.4:67849129-67849148 | None:intergenic | 35.0% | |
| GGTGTTCTTGAGCAAATTAA+TGG | - | chr8.4:67847501-67847520 | MS.gene79722:intron | 35.0% | |
| GTTAGAAAAGGATGTTGAAG+AGG | - | chr8.4:67848728-67848747 | MS.gene79722:intron | 35.0% | |
| TAGCTATCATGTAGAGCTTA+TGG | - | chr8.4:67849875-67849894 | MS.gene79722:intron | 35.0% | |
| TAGGTTATGTACCTTAGAGA+GGG | + | chr8.4:67847073-67847092 | None:intergenic | 35.0% | |
| TAGGTTGTGTTTGATAAGGA+TGG | - | chr8.4:67847480-67847499 | MS.gene79722:CDS | 35.0% | |
| TATGATGAATGCTTTCTCTG+AGG | - | chr8.4:67850143-67850162 | MS.gene79722:intron | 35.0% | |
| TATGTGAACATTGCCGTAAT+AGG | - | chr8.4:67849186-67849205 | MS.gene79722:intron | 35.0% | |
| TCATACTGTAACAGAGACAT+AGG | + | chr8.4:67850128-67850147 | None:intergenic | 35.0% | |
| TGACATATTGACATGTCCAT+AGG | + | chr8.4:67849915-67849934 | None:intergenic | 35.0% | |
| TGAGGACAATGATAAAAGCT+GGG | + | chr8.4:67849412-67849431 | None:intergenic | 35.0% | |
| TGCTAAGAAGTCTATAGTAC+TGG | - | chr8.4:67847813-67847832 | MS.gene79722:intron | 35.0% | |
| TTACAAGGCATACAATTGCA+AGG | + | chr8.4:67849011-67849030 | None:intergenic | 35.0% | |
| TTAGGTTATGTACCTTAGAG+AGG | + | chr8.4:67847074-67847093 | None:intergenic | 35.0% | |
| TTTGATTGCCTGTAGAAAGT+AGG | + | chr8.4:67848176-67848195 | None:intergenic | 35.0% | |
| ! | CTTGTTGTCAACATGGTAAT+GGG | - | chr8.4:67849606-67849625 | MS.gene79722:intron | 35.0% |
| ! | GATTCCAGTGTATTTCCTTT+TGG | + | chr8.4:67848486-67848505 | None:intergenic | 35.0% |
| ! | TACAGCATTTTCATCTCCAA+GGG | + | chr8.4:67850421-67850440 | None:intergenic | 35.0% |
| !! | ACTTGTTGTCAACATGGTAA+TGG | - | chr8.4:67849605-67849624 | MS.gene79722:intron | 35.0% |
| !! | AGTCACGTGACTTTTTAAAG+TGG | + | chr8.4:67850578-67850597 | None:intergenic | 35.0% |
| !! | CTTAGTTTGTGAGAGAGAAA+TGG | - | chr8.4:67848917-67848936 | MS.gene79722:intron | 35.0% |
| !!! | GGAGATTGGATTTTTAGGTT+TGG | - | chr8.4:67846978-67846997 | MS.gene79722:CDS | 35.0% |
| AAGATCTGCCTACTTTCTAC+AGG | - | chr8.4:67848165-67848184 | MS.gene79722:intron | 40.0% | |
| AGAAAAGGATGTTGAAGAGG+AGG | - | chr8.4:67848731-67848750 | MS.gene79722:intron | 40.0% | |
| AGACTGTTTGAGAGAGCTTA+CGG | + | chr8.4:67849948-67849967 | None:intergenic | 40.0% | |
| ATGGCTTCAAAGTCACTGTT+TGG | - | chr8.4:67847040-67847059 | MS.gene79722:intron | 40.0% | |
| ATGTTTCAGTGGAAAAGCAG+GGG | + | chr8.4:67850370-67850389 | None:intergenic | 40.0% | |
| ATTCAAGAAAGCCAGAAGCA+TGG | - | chr8.4:67850763-67850782 | MS.gene79722:CDS | 40.0% | |
| ATTGTAGTGTGATGAACTGG+TGG | - | chr8.4:67847278-67847297 | MS.gene79722:intron | 40.0% | |
| CATGCAAAATGCAAACTACC+AGG | + | chr8.4:67848088-67848107 | None:intergenic | 40.0% | |
| CTACAGGCAATCAAAGCAAA+AGG | - | chr8.4:67848181-67848200 | MS.gene79722:CDS | 40.0% | |
| CTGAGGACAATGATAAAAGC+TGG | + | chr8.4:67849413-67849432 | None:intergenic | 40.0% | |
| CTGATTGTAGTGTGATGAAC+TGG | - | chr8.4:67847275-67847294 | MS.gene79722:intron | 40.0% | |
| CTGGAGATTATGTTTGGATG+AGG | - | chr8.4:67847832-67847851 | MS.gene79722:intron | 40.0% | |
| CTTCCAGCATTTGATGTACT+CGG | - | chr8.4:67849534-67849553 | MS.gene79722:CDS | 40.0% | |
| CTTTCTTGAAGCTCCTGTTT+CGG | - | chr8.4:67848210-67848229 | MS.gene79722:CDS | 40.0% | |
| GAAATCTTTCTTTCTGGGTG+AGG | - | chr8.4:67849560-67849579 | MS.gene79722:CDS | 40.0% | |
| GACCTATTGCCAACCTATTA+CGG | + | chr8.4:67849202-67849221 | None:intergenic | 40.0% | |
| GAGCTTTCTGATAGCTAATC+TGG | + | chr8.4:67848617-67848636 | None:intergenic | 40.0% | |
| GATGTTTCAGTGGAAAAGCA+GGG | + | chr8.4:67850371-67850390 | None:intergenic | 40.0% | |
| GCGTAGAAGGTTAATTGACA+TGG | + | chr8.4:67847019-67847038 | None:intergenic | 40.0% | |
| GCTGGTAAGTTACTGTGATT+AGG | - | chr8.4:67850218-67850237 | MS.gene79722:intron | 40.0% | |
| GGTAAGTTACTGTGATTAGG+AGG | - | chr8.4:67850221-67850240 | MS.gene79722:intron | 40.0% | |
| GTTCCCAAAAGGAAATACAC+TGG | - | chr8.4:67848479-67848498 | MS.gene79722:intron | 40.0% | |
| TCAATTAACCTTCTACGCCA+TGG | - | chr8.4:67847021-67847040 | MS.gene79722:CDS | 40.0% | |
| TGAACATTGCCGTAATAGGT+TGG | - | chr8.4:67849190-67849209 | MS.gene79722:intron | 40.0% | |
| TGAGAGAGAAATGGAACAAG+TGG | - | chr8.4:67848926-67848945 | MS.gene79722:intron | 40.0% | |
| TGATGTTTCAGTGGAAAAGC+AGG | + | chr8.4:67850372-67850391 | None:intergenic | 40.0% | |
| TTCTATATAAAAGGGAGCGG+TGG | + | chr8.4:67849075-67849094 | None:intergenic | 40.0% | |
| TTTCCGAGTACATCAAATGC+TGG | + | chr8.4:67849540-67849559 | None:intergenic | 40.0% | |
| TTTCTTGAAGCTCCTGTTTC+GGG | - | chr8.4:67848211-67848230 | MS.gene79722:CDS | 40.0% | |
| ! | ACAGAAACAGAAAGTGCGTT+AGG | + | chr8.4:67847092-67847111 | None:intergenic | 40.0% |
| ! | CAACTAGTTATACTTGCTGC+CGG | - | chr8.4:67848259-67848278 | MS.gene79722:CDS | 40.0% |
| ! | GTACAGCATTTTCATCTCCA+AGG | + | chr8.4:67850422-67850441 | None:intergenic | 40.0% |
| ! | TCATTTTGAACGGACAACTG+AGG | + | chr8.4:67849430-67849449 | None:intergenic | 40.0% |
| ! | TTCAAGAAAGCCAGAAGCAT+GGG | - | chr8.4:67850764-67850783 | MS.gene79722:CDS | 40.0% |
| !! | AAACAGTGACTTTGAAGCCA+TGG | + | chr8.4:67847041-67847060 | None:intergenic | 40.0% |
| !! | GTGGTGGATTCGTTTGATAT+AGG | - | chr8.4:67849494-67849513 | MS.gene79722:intron | 40.0% |
| !! | TTGTCAACATGGTAATGGGA+AGG | - | chr8.4:67849610-67849629 | MS.gene79722:intron | 40.0% |
| AGGTTGGCAATAGGTCCATT+GGG | - | chr8.4:67849206-67849225 | MS.gene79722:intron | 45.0% | |
| AGTAAGAAGCCTGCAGAAGA+TGG | - | chr8.4:67848235-67848254 | MS.gene79722:CDS | 45.0% | |
| ATGTTGAAGAGGAGGAGTGA+GGG | - | chr8.4:67848739-67848758 | MS.gene79722:intron | 45.0% | |
| CAGGCAATCAAAGCAAAAGG+TGG | - | chr8.4:67848184-67848203 | MS.gene79722:CDS | 45.0% | |
| CGGCAGCAAGTATAACTAGT+TGG | + | chr8.4:67848261-67848280 | None:intergenic | 45.0% | |
| CGTGCACAGCTGAAAAATCA+AGG | + | chr8.4:67850799-67850818 | None:intergenic | 45.0% | |
| GACTGTTTGAGAGAGCTTAC+GGG | + | chr8.4:67849947-67849966 | None:intergenic | 45.0% | |
| GATCTTGGGGCCATAAGTAA+CGG | - | chr8.4:67850300-67850319 | MS.gene79722:CDS | 45.0% | |
| GGACAATGATAAAAGCTGGG+AGG | + | chr8.4:67849409-67849428 | None:intergenic | 45.0% | |
| TAGCACACTTCTTGATGTGC+TGG | - | chr8.4:67850200-67850219 | MS.gene79722:intron | 45.0% | |
| TCAAGGCTGTAAGCATAACC+TGG | - | chr8.4:67848067-67848086 | MS.gene79722:intron | 45.0% | |
| TCCACTGAAACATCAGCAGA+AGG | - | chr8.4:67850377-67850396 | MS.gene79722:intron | 45.0% | |
| TCCATTGGGATTGCACAGAT+GGG | - | chr8.4:67849220-67849239 | MS.gene79722:intron | 45.0% | |
| TCCTTCTGCTGATGTTTCAG+TGG | + | chr8.4:67850381-67850400 | None:intergenic | 45.0% | |
| TCTTTCTTTCTGGGTGAGGT+TGG | - | chr8.4:67849564-67849583 | MS.gene79722:CDS | 45.0% | |
| TGTGATGAACTGGTGGAACA+TGG | - | chr8.4:67847285-67847304 | MS.gene79722:intron | 45.0% | |
| TTCAGTTGGAGAAACACCTG+CGG | - | chr8.4:67847311-67847330 | MS.gene79722:intron | 45.0% | |
| TTGGAACAGAACCCTCTCTA+AGG | - | chr8.4:67847059-67847078 | MS.gene79722:intron | 45.0% | |
| TTTCTGGGTGAGGTTGGAAA+TGG | - | chr8.4:67849570-67849589 | MS.gene79722:CDS | 45.0% | |
| ! | AAAAGTGCAGCATAGCAGGA+TGG | + | chr8.4:67848340-67848359 | None:intergenic | 45.0% |
| ! | ACACTCGTTTGAAAGGCATG+AGG | + | chr8.4:67848420-67848439 | None:intergenic | 45.0% |
| ! | AGCACATCAAGAAGTGTGCT+AGG | + | chr8.4:67850201-67850220 | None:intergenic | 45.0% |
| ! | CTGACACTTGCTGAAAGAAG+TGG | - | chr8.4:67850168-67850187 | MS.gene79722:intron | 45.0% |
| ! | TAGGTTGGCAATAGGTCCAT+TGG | - | chr8.4:67849205-67849224 | MS.gene79722:intron | 45.0% |
| ! | TCAAGAAAGCCAGAAGCATG+GGG | - | chr8.4:67850765-67850784 | MS.gene79722:CDS | 45.0% |
| ! | TGCCGTAATAGGTTGGCAAT+AGG | - | chr8.4:67849197-67849216 | MS.gene79722:intron | 45.0% |
| !! | AATCGGTGTCAGTCACATCA+AGG | + | chr8.4:67847420-67847439 | None:intergenic | 45.0% |
| ACTAGTTGGCCATCTTCTGC+AGG | + | chr8.4:67848247-67848266 | None:intergenic | 50.0% | |
| CATTGGGATTGCACAGATGG+GGG | - | chr8.4:67849222-67849241 | MS.gene79722:intron | 50.0% | |
| CCATTGGGATTGCACAGATG+GGG | - | chr8.4:67849221-67849240 | MS.gene79722:intron | 50.0% | |
| GATGTTGAAGAGGAGGAGTG+AGG | - | chr8.4:67848738-67848757 | MS.gene79722:intron | 50.0% | |
| GGCAAAGAAATGTGACTGCG+AGG | + | chr8.4:67850648-67850667 | None:intergenic | 50.0% | |
| GGCTTCTTACTACCCGAAAC+AGG | + | chr8.4:67848226-67848245 | None:intergenic | 50.0% | |
| GTCCATTGGGATTGCACAGA+TGG | - | chr8.4:67849219-67849238 | MS.gene79722:intron | 50.0% | |
| GTGGAACATGGTGCTTCAGT+TGG | - | chr8.4:67847297-67847316 | MS.gene79722:intron | 50.0% | |
| TCAGCAGAAGGACATGAGAC+TGG | - | chr8.4:67850389-67850408 | MS.gene79722:intron | 50.0% | |
| ! | AAAGCCAGAAGCATGGGGTT+GGG | - | chr8.4:67850770-67850789 | MS.gene79722:CDS | 50.0% |
| ! | GGCTAAAAGTGCAGCATAGC+AGG | + | chr8.4:67848344-67848363 | None:intergenic | 50.0% |
| ! | TATACTTGCTGCCGGAGACA+AGG | - | chr8.4:67848267-67848286 | MS.gene79722:CDS | 50.0% |
| !! | CTTTGAAGCCATGGCGTAGA+AGG | + | chr8.4:67847032-67847051 | None:intergenic | 50.0% |
| ATCCGATCCTGCAGCTGCTT+TGG | - | chr8.4:67847371-67847390 | MS.gene79722:CDS | 55.0% | |
| CACTTCTTGACAACAGCCGC+AGG | + | chr8.4:67847330-67847349 | None:intergenic | 55.0% | |
| CCCCATCTGTGCAATCCCAA+TGG | + | chr8.4:67849224-67849243 | None:intergenic | 55.0% | |
| GATGGGGGTTGCCTCTCATT+AGG | - | chr8.4:67849237-67849256 | MS.gene79722:intron | 55.0% | |
| TGTCGCAGCTGCAGCAAATG+AGG | - | chr8.4:67850449-67850468 | MS.gene79722:CDS | 55.0% | |
| ! | ATGAGACTGGCTCTTGCCCT+TGG | - | chr8.4:67850402-67850421 | MS.gene79722:intron | 55.0% |
| ! | GAAAGCCAGAAGCATGGGGT+TGG | - | chr8.4:67850769-67850788 | MS.gene79722:CDS | 55.0% |
| ! | TCATTTGCTGCAGCTGCGAC+AGG | + | chr8.4:67850450-67850469 | None:intergenic | 55.0% |
| CATGCGCTCTCACGCACACT+CGG | + | chr8.4:67850490-67850509 | None:intergenic | 60.0% | |
| CGCCAAAGCAGCTGCAGGAT+CGG | + | chr8.4:67847376-67847395 | None:intergenic | 60.0% | |
| GTCTCCCAACCCCATGCTTC+TGG | + | chr8.4:67850777-67850796 | None:intergenic | 60.0% | |
| ! | CGATCCTGCAGCTGCTTTGG+CGG | - | chr8.4:67847374-67847393 | MS.gene79722:CDS | 60.0% |
| CTGACCGCCAAAGCAGCTGC+AGG | + | chr8.4:67847381-67847400 | None:intergenic | 65.0% | |
| GCTGCAGCTGCGACAGGCAT+TGG | + | chr8.4:67850444-67850463 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 67846976 | 67850832 | 67846976 | ID=MS.gene79722 |
| chr8.4 | mRNA | 67846976 | 67850832 | 67846976 | ID=MS.gene79722.t1;Parent=MS.gene79722 |
| chr8.4 | exon | 67850728 | 67850832 | 67850728 | ID=MS.gene79722.t1.exon1;Parent=MS.gene79722.t1 |
| chr8.4 | CDS | 67850728 | 67850832 | 67850728 | ID=cds.MS.gene79722.t1;Parent=MS.gene79722.t1 |
| chr8.4 | exon | 67850413 | 67850523 | 67850413 | ID=MS.gene79722.t1.exon2;Parent=MS.gene79722.t1 |
| chr8.4 | CDS | 67850413 | 67850523 | 67850413 | ID=cds.MS.gene79722.t1;Parent=MS.gene79722.t1 |
| chr8.4 | exon | 67850227 | 67850325 | 67850227 | ID=MS.gene79722.t1.exon3;Parent=MS.gene79722.t1 |
| chr8.4 | CDS | 67850227 | 67850325 | 67850227 | ID=cds.MS.gene79722.t1;Parent=MS.gene79722.t1 |
| chr8.4 | exon | 67849520 | 67849621 | 67849520 | ID=MS.gene79722.t1.exon4;Parent=MS.gene79722.t1 |
| chr8.4 | CDS | 67849520 | 67849621 | 67849520 | ID=cds.MS.gene79722.t1;Parent=MS.gene79722.t1 |
| chr8.4 | exon | 67848177 | 67848292 | 67848177 | ID=MS.gene79722.t1.exon5;Parent=MS.gene79722.t1 |
| chr8.4 | CDS | 67848177 | 67848292 | 67848177 | ID=cds.MS.gene79722.t1;Parent=MS.gene79722.t1 |
| chr8.4 | exon | 67847587 | 67847665 | 67847587 | ID=MS.gene79722.t1.exon6;Parent=MS.gene79722.t1 |
| chr8.4 | CDS | 67847587 | 67847665 | 67847587 | ID=cds.MS.gene79722.t1;Parent=MS.gene79722.t1 |
| chr8.4 | exon | 67847338 | 67847508 | 67847338 | ID=MS.gene79722.t1.exon7;Parent=MS.gene79722.t1 |
| chr8.4 | CDS | 67847338 | 67847508 | 67847338 | ID=cds.MS.gene79722.t1;Parent=MS.gene79722.t1 |
| chr8.4 | exon | 67846976 | 67847047 | 67846976 | ID=MS.gene79722.t1.exon8;Parent=MS.gene79722.t1 |
| chr8.4 | CDS | 67846976 | 67847047 | 67846976 | ID=cds.MS.gene79722.t1;Parent=MS.gene79722.t1 |
| Gene Sequence |
| Protein sequence |
