Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71535.t1 | XP_013443444.1 | 100 | 214 | 0 | 0 | 1 | 214 | 168 | 381 | 1.60E-113 | 418.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71535.t1 | Q94CJ5 | 74.9 | 211 | 53 | 0 | 1 | 211 | 174 | 384 | 2.9e-87 | 322.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71535.t1 | A0A072TIU5 | 100.0 | 214 | 0 | 0 | 1 | 214 | 168 | 381 | 1.2e-113 | 418.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene71535 | 0.819176 | 1.33E-52 | -1.69E-46 |
| MS.gene049171 | MS.gene71535 | 0.840427 | 8.75E-58 | -1.69E-46 |
| MS.gene049173 | MS.gene71535 | 0.854064 | 1.58E-61 | -1.69E-46 |
| MS.gene049217 | MS.gene71535 | 0.846332 | 2.32E-59 | -1.69E-46 |
| MS.gene049222 | MS.gene71535 | 0.861717 | 8.43E-64 | -1.69E-46 |
| MS.gene049285 | MS.gene71535 | 0.855775 | 5.03E-62 | -1.69E-46 |
| MS.gene049320 | MS.gene71535 | 0.840044 | 1.10E-57 | -1.69E-46 |
| MS.gene049369 | MS.gene71535 | 0.828841 | 7.18E-55 | -1.69E-46 |
| MS.gene049427 | MS.gene71535 | 0.883568 | 4.02E-71 | -1.69E-46 |
| MS.gene049491 | MS.gene71535 | 0.801348 | 9.39E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene71535 | 0.86899 | 4.33E-66 | -1.69E-46 |
| MS.gene049627 | MS.gene71535 | 0.804216 | 2.40E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene71535 | 0.833723 | 4.53E-56 | -1.69E-46 |
| MS.gene049805 | MS.gene71535 | 0.879429 | 1.26E-69 | -1.69E-46 |
| MS.gene050163 | MS.gene71535 | 0.869314 | 3.40E-66 | -1.69E-46 |
| MS.gene050165 | MS.gene71535 | 0.856326 | 3.47E-62 | -1.69E-46 |
| MS.gene050333 | MS.gene71535 | 0.844774 | 6.14E-59 | -1.69E-46 |
| MS.gene050432 | MS.gene71535 | 0.837223 | 5.90E-57 | -1.69E-46 |
| MS.gene050504 | MS.gene71535 | 0.837586 | 4.76E-57 | -1.69E-46 |
| MS.gene050518 | MS.gene71535 | 0.828799 | 7.35E-55 | -1.69E-46 |
| MS.gene050538 | MS.gene71535 | 0.825435 | 4.70E-54 | -1.69E-46 |
| MS.gene050577 | MS.gene71535 | 0.814121 | 1.81E-51 | -1.69E-46 |
| MS.gene050593 | MS.gene71535 | 0.863241 | 2.87E-64 | -1.69E-46 |
| MS.gene050612 | MS.gene71535 | 0.833942 | 3.99E-56 | -1.69E-46 |
| MS.gene050675 | MS.gene71535 | 0.828297 | 9.72E-55 | -1.69E-46 |
| MS.gene050699 | MS.gene71535 | 0.835225 | 1.90E-56 | -1.69E-46 |
| MS.gene050747 | MS.gene71535 | 0.851873 | 6.68E-61 | -1.69E-46 |
| MS.gene050767 | MS.gene71535 | 0.818746 | 1.67E-52 | -1.69E-46 |
| MS.gene050770 | MS.gene71535 | 0.822245 | 2.63E-53 | -1.69E-46 |
| MS.gene050772 | MS.gene71535 | 0.874855 | 4.87E-68 | -1.69E-46 |
| MS.gene05080 | MS.gene71535 | 0.806022 | 1.01E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene71535 | 0.854549 | 1.14E-61 | -1.69E-46 |
| MS.gene050986 | MS.gene71535 | 0.823446 | 1.38E-53 | -1.69E-46 |
| MS.gene05100 | MS.gene71535 | 0.828869 | 7.07E-55 | -1.69E-46 |
| MS.gene05101 | MS.gene71535 | 0.806153 | 9.44E-50 | -1.69E-46 |
| MS.gene05105 | MS.gene71535 | 0.821754 | 3.41E-53 | -1.69E-46 |
| MS.gene051228 | MS.gene71535 | 0.838314 | 3.10E-57 | -1.69E-46 |
| MS.gene051387 | MS.gene71535 | 0.840351 | 9.16E-58 | -1.69E-46 |
| MS.gene051551 | MS.gene71535 | 0.803451 | 3.46E-49 | -1.69E-46 |
| MS.gene051617 | MS.gene71535 | 0.81591 | 7.26E-52 | -1.69E-46 |
| MS.gene051666 | MS.gene71535 | 0.854576 | 1.12E-61 | -1.69E-46 |
| MS.gene051692 | MS.gene71535 | 0.895935 | 5.97E-76 | -1.69E-46 |
| MS.gene051694 | MS.gene71535 | 0.833661 | 4.69E-56 | -1.69E-46 |
| MS.gene051810 | MS.gene71535 | 0.865777 | 4.62E-65 | -1.69E-46 |
| MS.gene051838 | MS.gene71535 | 0.810886 | 9.22E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene71535 | 0.83585 | 1.32E-56 | -1.69E-46 |
| MS.gene052164 | MS.gene71535 | 0.817299 | 3.54E-52 | -1.69E-46 |
| MS.gene052271 | MS.gene71535 | 0.846482 | 2.11E-59 | -1.69E-46 |
| MS.gene052322 | MS.gene71535 | 0.82088 | 5.43E-53 | -1.69E-46 |
| MS.gene052379 | MS.gene71535 | 0.854911 | 8.98E-62 | -1.69E-46 |
| MS.gene052421 | MS.gene71535 | 0.803131 | 4.04E-49 | -1.69E-46 |
| MS.gene052481 | MS.gene71535 | 0.862092 | 6.47E-64 | -1.69E-46 |
| MS.gene052484 | MS.gene71535 | 0.886945 | 2.20E-72 | -1.69E-46 |
| MS.gene052485 | MS.gene71535 | 0.829272 | 5.65E-55 | -1.69E-46 |
| MS.gene052501 | MS.gene71535 | 0.807698 | 4.45E-50 | -1.69E-46 |
| MS.gene052503 | MS.gene71535 | 0.805637 | 1.21E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene71535 | 0.869513 | 2.93E-66 | -1.69E-46 |
| MS.gene052872 | MS.gene71535 | 0.809268 | 2.06E-50 | -1.69E-46 |
| MS.gene052916 | MS.gene71535 | 0.818001 | 2.46E-52 | -1.69E-46 |
| MS.gene052966 | MS.gene71535 | 0.836516 | 8.94E-57 | -1.69E-46 |
| MS.gene052982 | MS.gene71535 | 0.813718 | 2.22E-51 | -1.69E-46 |
| MS.gene053103 | MS.gene71535 | 0.823728 | 1.18E-53 | -1.69E-46 |
| MS.gene053104 | MS.gene71535 | 0.843699 | 1.19E-58 | -1.69E-46 |
| MS.gene053203 | MS.gene71535 | 0.820136 | 8.05E-53 | -1.69E-46 |
| MS.gene053207 | MS.gene71535 | 0.885088 | 1.10E-71 | -1.69E-46 |
| MS.gene053209 | MS.gene71535 | 0.818972 | 1.48E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene71535 | 0.874291 | 7.58E-68 | -1.69E-46 |
| MS.gene053286 | MS.gene71535 | 0.870952 | 9.89E-67 | -1.69E-46 |
| MS.gene053322 | MS.gene71535 | 0.864683 | 1.02E-64 | -1.69E-46 |
| MS.gene053449 | MS.gene71535 | 0.840499 | 8.38E-58 | -1.69E-46 |
| MS.gene053574 | MS.gene71535 | 0.844151 | 9.03E-59 | -1.69E-46 |
| MS.gene053632 | MS.gene71535 | 0.856673 | 2.75E-62 | -1.69E-46 |
| MS.gene053813 | MS.gene71535 | 0.810827 | 9.50E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene71535 | 0.809862 | 1.53E-50 | -1.69E-46 |
| MS.gene054376 | MS.gene71535 | 0.817582 | 3.06E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene71535 | 0.826609 | 2.47E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene71535 | 0.811285 | 7.56E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene71535 | 0.875651 | 2.60E-68 | -1.69E-46 |
| MS.gene054642 | MS.gene71535 | 0.872866 | 2.29E-67 | -1.69E-46 |
| MS.gene054927 | MS.gene71535 | 0.815859 | 7.45E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene71535 | 0.821099 | 4.83E-53 | -1.69E-46 |
| MS.gene05505 | MS.gene71535 | 0.820083 | 8.27E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene71535 | 0.860926 | 1.47E-63 | -1.69E-46 |
| MS.gene055212 | MS.gene71535 | 0.812286 | 4.58E-51 | -1.69E-46 |
| MS.gene055224 | MS.gene71535 | 0.805447 | 1.33E-49 | -1.69E-46 |
| MS.gene055289 | MS.gene71535 | 0.808426 | 3.12E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene71535 | 0.842652 | 2.27E-58 | -1.69E-46 |
| MS.gene055397 | MS.gene71535 | 0.832017 | 1.20E-55 | -1.69E-46 |
| MS.gene055412 | MS.gene71535 | 0.841208 | 5.46E-58 | -1.69E-46 |
| MS.gene055499 | MS.gene71535 | 0.864477 | 1.18E-64 | -1.69E-46 |
| MS.gene055502 | MS.gene71535 | 0.854672 | 1.05E-61 | -1.69E-46 |
| MS.gene055577 | MS.gene71535 | 0.853561 | 2.20E-61 | -1.69E-46 |
| MS.gene055633 | MS.gene71535 | 0.839369 | 1.65E-57 | -1.69E-46 |
| MS.gene055636 | MS.gene71535 | 0.833587 | 4.90E-56 | -1.69E-46 |
| MS.gene055638 | MS.gene71535 | 0.815746 | 7.89E-52 | -1.69E-46 |
| MS.gene055647 | MS.gene71535 | 0.878365 | 2.98E-69 | -1.69E-46 |
| MS.gene055722 | MS.gene71535 | 0.881237 | 2.84E-70 | -1.69E-46 |
| MS.gene05592 | MS.gene71535 | 0.84758 | 1.06E-59 | -1.69E-46 |
| MS.gene055941 | MS.gene71535 | 0.855547 | 5.86E-62 | -1.69E-46 |
| MS.gene056083 | MS.gene71535 | 0.848714 | 5.14E-60 | -1.69E-46 |
| MS.gene056374 | MS.gene71535 | 0.885754 | 6.19E-72 | -1.69E-46 |
| MS.gene056410 | MS.gene71535 | 0.807287 | 5.44E-50 | -1.69E-46 |
| MS.gene056487 | MS.gene71535 | 0.803064 | 4.17E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene71535 | 0.800628 | 1.32E-48 | -1.69E-46 |
| MS.gene056510 | MS.gene71535 | 0.831635 | 1.49E-55 | -1.69E-46 |
| MS.gene056511 | MS.gene71535 | 0.813858 | 2.07E-51 | -1.69E-46 |
| MS.gene056549 | MS.gene71535 | 0.850437 | 1.70E-60 | -1.69E-46 |
| MS.gene056609 | MS.gene71535 | 0.835446 | 1.67E-56 | -1.69E-46 |
| MS.gene05664 | MS.gene71535 | 0.81334 | 2.69E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene71535 | 0.851087 | 1.11E-60 | -1.69E-46 |
| MS.gene05666 | MS.gene71535 | 0.815474 | 9.07E-52 | -1.69E-46 |
| MS.gene056692 | MS.gene71535 | 0.817303 | 3.54E-52 | -1.69E-46 |
| MS.gene056877 | MS.gene71535 | 0.800965 | 1.13E-48 | -1.69E-46 |
| MS.gene056897 | MS.gene71535 | 0.880852 | 3.90E-70 | -1.69E-46 |
| MS.gene057011 | MS.gene71535 | 0.859377 | 4.31E-63 | -1.69E-46 |
| MS.gene057076 | MS.gene71535 | 0.833174 | 6.20E-56 | -1.69E-46 |
| MS.gene057124 | MS.gene71535 | 0.820008 | 8.60E-53 | -1.69E-46 |
| MS.gene057129 | MS.gene71535 | 0.875021 | 4.28E-68 | -1.69E-46 |
| MS.gene057146 | MS.gene71535 | 0.834333 | 3.18E-56 | -1.69E-46 |
| MS.gene057285 | MS.gene71535 | 0.814201 | 1.74E-51 | -1.69E-46 |
| MS.gene057295 | MS.gene71535 | 0.814675 | 1.37E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene71535 | 0.877727 | 4.98E-69 | -1.69E-46 |
| MS.gene05735 | MS.gene71535 | 0.801011 | 1.10E-48 | -1.69E-46 |
| MS.gene057416 | MS.gene71535 | 0.877568 | 5.66E-69 | -1.69E-46 |
| MS.gene057658 | MS.gene71535 | 0.813289 | 2.76E-51 | -1.69E-46 |
| MS.gene057734 | MS.gene71535 | 0.815241 | 1.02E-51 | -1.69E-46 |
| MS.gene057831 | MS.gene71535 | 0.815122 | 1.09E-51 | -1.69E-46 |
| MS.gene057856 | MS.gene71535 | 0.829712 | 4.41E-55 | -1.69E-46 |
| MS.gene057926 | MS.gene71535 | 0.836093 | 1.14E-56 | -1.69E-46 |
| MS.gene058006 | MS.gene71535 | 0.845586 | 3.70E-59 | -1.69E-46 |
| MS.gene058019 | MS.gene71535 | 0.861739 | 8.30E-64 | -1.69E-46 |
| MS.gene058130 | MS.gene71535 | 0.800341 | 1.51E-48 | -1.69E-46 |
| MS.gene058293 | MS.gene71535 | 0.810202 | 1.30E-50 | -1.69E-46 |
| MS.gene058323 | MS.gene71535 | 0.835216 | 1.91E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene71535 | 0.856732 | 2.64E-62 | -1.69E-46 |
| MS.gene058544 | MS.gene71535 | 0.828541 | 8.49E-55 | -1.69E-46 |
| MS.gene058660 | MS.gene71535 | 0.824003 | 1.02E-53 | -1.69E-46 |
| MS.gene058723 | MS.gene71535 | 0.820981 | 5.15E-53 | -1.69E-46 |
| MS.gene058773 | MS.gene71535 | 0.84388 | 1.07E-58 | -1.69E-46 |
| MS.gene058838 | MS.gene71535 | 0.846528 | 2.05E-59 | -1.69E-46 |
| MS.gene05883 | MS.gene71535 | 0.835002 | 2.16E-56 | -1.69E-46 |
| MS.gene059022 | MS.gene71535 | 0.833022 | 6.77E-56 | -1.69E-46 |
| MS.gene059023 | MS.gene71535 | 0.827784 | 1.29E-54 | -1.69E-46 |
| MS.gene059029 | MS.gene71535 | 0.830913 | 2.25E-55 | -1.69E-46 |
| MS.gene05913 | MS.gene71535 | 0.809414 | 1.91E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene71535 | 0.83519 | 1.94E-56 | -1.69E-46 |
| MS.gene059455 | MS.gene71535 | 0.845106 | 5.00E-59 | -1.69E-46 |
| MS.gene059536 | MS.gene71535 | 0.877701 | 5.09E-69 | -1.69E-46 |
| MS.gene059676 | MS.gene71535 | 0.816764 | 4.67E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene71535 | 0.84086 | 6.74E-58 | -1.69E-46 |
| MS.gene059688 | MS.gene71535 | 0.832012 | 1.20E-55 | -1.69E-46 |
| MS.gene059692 | MS.gene71535 | 0.82282 | 1.93E-53 | -1.69E-46 |
| MS.gene059695 | MS.gene71535 | 0.819295 | 1.25E-52 | -1.69E-46 |
| MS.gene059711 | MS.gene71535 | 0.806307 | 8.77E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene71535 | 0.867767 | 1.07E-65 | -1.69E-46 |
| MS.gene059756 | MS.gene71535 | 0.813041 | 3.13E-51 | -1.69E-46 |
| MS.gene059801 | MS.gene71535 | 0.853144 | 2.90E-61 | -1.69E-46 |
| MS.gene059865 | MS.gene71535 | 0.822478 | 2.32E-53 | -1.69E-46 |
| MS.gene059902 | MS.gene71535 | 0.826752 | 2.28E-54 | -1.69E-46 |
| MS.gene059960 | MS.gene71535 | 0.8602 | 2.44E-63 | -1.69E-46 |
| MS.gene060193 | MS.gene71535 | 0.846156 | 2.59E-59 | -1.69E-46 |
| MS.gene060403 | MS.gene71535 | 0.819752 | 9.84E-53 | -1.69E-46 |
| MS.gene060482 | MS.gene71535 | 0.827297 | 1.69E-54 | -1.69E-46 |
| MS.gene060703 | MS.gene71535 | 0.826361 | 2.83E-54 | -1.69E-46 |
| MS.gene060727 | MS.gene71535 | 0.80119 | 1.01E-48 | -1.69E-46 |
| MS.gene060762 | MS.gene71535 | 0.851679 | 7.59E-61 | -1.69E-46 |
| MS.gene06077 | MS.gene71535 | 0.808323 | 3.28E-50 | -1.69E-46 |
| MS.gene060804 | MS.gene71535 | 0.866149 | 3.52E-65 | -1.69E-46 |
| MS.gene060818 | MS.gene71535 | 0.852606 | 4.14E-61 | -1.69E-46 |
| MS.gene060835 | MS.gene71535 | 0.828022 | 1.13E-54 | -1.69E-46 |
| MS.gene060837 | MS.gene71535 | 0.839359 | 1.66E-57 | -1.69E-46 |
| MS.gene06092 | MS.gene71535 | 0.839947 | 1.17E-57 | -1.69E-46 |
| MS.gene060982 | MS.gene71535 | 0.826065 | 3.33E-54 | -1.69E-46 |
| MS.gene061041 | MS.gene71535 | 0.833227 | 6.02E-56 | -1.69E-46 |
| MS.gene061134 | MS.gene71535 | 0.837105 | 6.33E-57 | -1.69E-46 |
| MS.gene061150 | MS.gene71535 | 0.86369 | 2.08E-64 | -1.69E-46 |
| MS.gene061171 | MS.gene71535 | 0.820216 | 7.71E-53 | -1.69E-46 |
| MS.gene061200 | MS.gene71535 | 0.875442 | 3.07E-68 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71535.t1 | MTR_0013s0150 | 100.000 | 214 | 0 | 0 | 1 | 214 | 168 | 381 | 9.14e-157 | 439 |
| MS.gene71535.t1 | MTR_3g033620 | 75.117 | 213 | 51 | 1 | 1 | 213 | 180 | 390 | 4.82e-117 | 338 |
| MS.gene71535.t1 | MTR_4g077000 | 74.762 | 210 | 53 | 0 | 1 | 210 | 179 | 388 | 7.31e-117 | 338 |
| MS.gene71535.t1 | MTR_3g071970 | 37.104 | 221 | 123 | 5 | 1 | 210 | 501 | 716 | 2.99e-40 | 146 |
| MS.gene71535.t1 | MTR_2g084605 | 33.498 | 203 | 130 | 3 | 11 | 210 | 192 | 392 | 1.55e-30 | 116 |
| MS.gene71535.t1 | MTR_7g064130 | 31.034 | 203 | 135 | 3 | 11 | 210 | 248 | 448 | 3.45e-27 | 107 |
| MS.gene71535.t1 | MTR_7g074090 | 31.579 | 209 | 126 | 5 | 5 | 211 | 115 | 308 | 4.47e-27 | 105 |
| MS.gene71535.t1 | MTR_7g074090 | 31.579 | 209 | 126 | 5 | 5 | 211 | 115 | 308 | 1.47e-26 | 105 |
| MS.gene71535.t1 | MTR_7g074090 | 31.579 | 209 | 126 | 5 | 5 | 211 | 133 | 326 | 2.02e-26 | 105 |
| MS.gene71535.t1 | MTR_7g074070 | 31.132 | 212 | 129 | 4 | 1 | 210 | 122 | 318 | 1.16e-22 | 94.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71535.t1 | AT5G12470 | 74.882 | 211 | 53 | 0 | 1 | 211 | 174 | 384 | 2.77e-117 | 339 |
| MS.gene71535.t1 | AT3G56140 | 42.081 | 221 | 112 | 5 | 1 | 210 | 274 | 489 | 4.45e-47 | 162 |
| MS.gene71535.t1 | AT3G56140 | 42.081 | 221 | 112 | 5 | 1 | 210 | 493 | 708 | 3.43e-46 | 162 |
| MS.gene71535.t1 | AT3G56140 | 42.081 | 221 | 112 | 5 | 1 | 210 | 493 | 708 | 3.43e-46 | 162 |
| MS.gene71535.t1 | AT2G40400 | 41.629 | 221 | 113 | 5 | 1 | 210 | 484 | 699 | 8.12e-46 | 161 |
| MS.gene71535.t1 | AT2G40400 | 41.629 | 221 | 113 | 5 | 1 | 210 | 484 | 699 | 8.12e-46 | 161 |
| MS.gene71535.t1 | AT2G40400 | 40.351 | 171 | 87 | 4 | 1 | 160 | 484 | 650 | 1.94e-30 | 118 |
| MS.gene71535.t1 | AT5G22790 | 33.981 | 206 | 126 | 5 | 11 | 210 | 232 | 433 | 2.34e-27 | 108 |
| MS.gene71535.t1 | AT2G37860 | 33.010 | 206 | 127 | 6 | 11 | 210 | 232 | 432 | 7.89e-26 | 103 |
| MS.gene71535.t1 | AT2G37860 | 33.010 | 206 | 127 | 6 | 11 | 210 | 232 | 432 | 7.89e-26 | 103 |
| MS.gene71535.t1 | AT3G08630 | 30.093 | 216 | 136 | 4 | 1 | 214 | 121 | 323 | 2.62e-25 | 101 |
| MS.gene71535.t1 | AT3G08640 | 28.704 | 216 | 139 | 4 | 1 | 214 | 124 | 326 | 1.64e-22 | 93.6 |
Find 49 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCTTAATCCCTTATCTTC+TGG | 0.276851 | 4.2:+64041551 | None:intergenic |
| CGAGCCCAAGAAAGTGTTTC+CGG | 0.280740 | 4.2:+64041705 | None:intergenic |
| TAGAACCGGAAACACTTTCT+TGG | 0.331700 | 4.2:-64041710 | MS.gene71535:CDS |
| GTCCAGAAGATAAGGGATTA+AGG | 0.331702 | 4.2:-64041553 | None:intergenic |
| CACTTAACATGAGCTTGTTT+TGG | 0.340136 | 4.2:+64041749 | None:intergenic |
| CTTATTGCTAAATTCTTCTT+CGG | 0.353659 | 4.2:-64043096 | MS.gene71535:CDS |
| CAACACTCAACAGGTGGCTT+TGG | 0.358033 | 4.2:-64042952 | MS.gene71535:intron |
| ATCTGCTTTGCTGTTAGAAC+CGG | 0.383744 | 4.2:-64041724 | MS.gene71535:CDS |
| AGAACCGGAAACACTTTCTT+GGG | 0.399853 | 4.2:-64041709 | MS.gene71535:CDS |
| ACTCAACAGGTGGCTTTGGC+TGG | 0.406450 | 4.2:-64042948 | MS.gene71535:intron |
| ATTTCAGACTGCTGCGGAGT+TGG | 0.438593 | 4.2:-64043363 | MS.gene71535:intron |
| TGGCAGTATCTAGCAACTTA+AGG | 0.443496 | 4.2:-64041920 | MS.gene71535:intron |
| AAGCTATTTGCAGTTGGGAC+TGG | 0.451891 | 4.2:-64042787 | MS.gene71535:CDS |
| CCACCACCTTCCGTCAGTGC+TGG | 0.454269 | 4.2:-64043120 | MS.gene71535:CDS |
| GTGGATTATGCTCGCTGGGT+TGG | 0.464416 | 4.2:-64041577 | MS.gene71535:CDS |
| CGTAGAGAAACCGTCGGAGC+AGG | 0.477222 | 4.2:+64043144 | None:intergenic |
| GGTGGGTGGATTATGCTCGC+TGG | 0.481668 | 4.2:-64041582 | MS.gene71535:CDS |
| TGTTGCCTATGGGGTTTACA+TGG | 0.487654 | 4.2:-64041940 | MS.gene71535:CDS |
| TTATCAACGAGTGTTGCCTA+TGG | 0.493065 | 4.2:-64041951 | MS.gene71535:CDS |
| GGGTTGGAGTCCAGAAGATA+AGG | 0.497889 | 4.2:-64041561 | MS.gene71535:CDS |
| TATCAACGAGTGTTGCCTAT+GGG | 0.498398 | 4.2:-64041950 | MS.gene71535:CDS |
| TGTGTGGCTTCCTGCTCCGA+CGG | 0.501035 | 4.2:-64043154 | MS.gene71535:CDS |
| ACCAGGTATCAAATTCTAGC+TGG | 0.501427 | 4.2:-64041808 | MS.gene71535:intron |
| AGTTGGGACTGGTGCATCAC+TGG | 0.504898 | 4.2:-64042776 | MS.gene71535:intron |
| GAGCTAAGCTATTTGCAGTT+GGG | 0.507915 | 4.2:-64042792 | MS.gene71535:CDS |
| CGCATTGATTAATGCGCGGA+AGG | 0.511156 | 4.2:-64042018 | MS.gene71535:CDS |
| TATTCACTTATACAGAGAAT+AGG | 0.511633 | 4.2:-64042918 | MS.gene71535:CDS |
| GGAGCTAAGCTATTTGCAGT+TGG | 0.516112 | 4.2:-64042793 | MS.gene71535:CDS |
| AAGCATAAAATCTGCTACAA+TGG | 0.517084 | 4.2:+64043176 | None:intergenic |
| AGCAATAAGTCCAGCACTGA+CGG | 0.529127 | 4.2:+64043110 | None:intergenic |
| GTGGGTGGATTATGCTCGCT+GGG | 0.540441 | 4.2:-64041581 | MS.gene71535:CDS |
| ACAGAGAATAGGTGCTATTG+TGG | 0.560956 | 4.2:-64042907 | MS.gene71535:intron |
| GGTTGGAGTCCAGAAGATAA+GGG | 0.564296 | 4.2:-64041560 | MS.gene71535:CDS |
| CGGTGTTGGCATCTTTACAA+AGG | 0.571151 | 4.2:-64045164 | MS.gene71535:intron |
| GCAACACTCGTTGATAATAC+CGG | 0.574937 | 4.2:+64041957 | None:intergenic |
| GTTGCTATGGAATGCGGTGT+TGG | 0.583902 | 4.2:-64045178 | None:intergenic |
| CCAGCACTGACGGAAGGTGG+TGG | 0.601074 | 4.2:+64043120 | None:intergenic |
| TAGCTGGAATTATTGAACAA+CGG | 0.608049 | 4.2:-64041792 | MS.gene71535:CDS |
| TCATCTCTTCTGCAGCGGAA+CGG | 0.609103 | 4.2:-64042814 | MS.gene71535:intron |
| TGACGAGGCAGAGGAAGTAC+CGG | 0.617957 | 4.2:-64041976 | MS.gene71535:CDS |
| ATCAACGAGTGTTGCCTATG+GGG | 0.625712 | 4.2:-64041949 | MS.gene71535:CDS |
| AGTCCAGCACTGACGGAAGG+TGG | 0.630398 | 4.2:+64043117 | None:intergenic |
| GCTAAGGTTGCTATGGAATG+CGG | 0.648096 | 4.2:-64045184 | None:intergenic |
| ATAAGTCCAGCACTGACGGA+AGG | 0.648262 | 4.2:+64043114 | None:intergenic |
| TCTTCGCATGAATAGGTGGG+TGG | 0.667742 | 4.2:-64041596 | MS.gene71535:intron |
| TACTGCCATGTAAACCCCAT+AGG | 0.674032 | 4.2:+64041935 | None:intergenic |
| GTTTACATTTCAGACTGCTG+CGG | 0.677064 | 4.2:-64043369 | MS.gene71535:intron |
| CAAACGCATTGATTAATGCG+CGG | 0.722511 | 4.2:-64042022 | MS.gene71535:CDS |
| GGTGGTCGTAGAGAAACCGT+CGG | 0.726635 | 4.2:+64043138 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTAATTTAATTATTAAT+AGG | - | chr4.2:64043522-64043541 | MS.gene71535:intron | 0.0% |
| !! | ACAATAGTATAATATATTAT+TGG | - | chr4.2:64042925-64042944 | MS.gene71535:CDS | 10.0% |
| !! | ATAAATATATTAAGAGAAAA+AGG | - | chr4.2:64042414-64042433 | MS.gene71535:intron | 10.0% |
| !! | ATCATTTAACAAATATTATT+TGG | - | chr4.2:64042991-64043010 | MS.gene71535:intron | 10.0% |
| !! | ATTATATACTAATTATTACA+TGG | + | chr4.2:64044615-64044634 | None:intergenic | 10.0% |
| !! | ATTTAATTATTAATAGGTAA+TGG | - | chr4.2:64043528-64043547 | MS.gene71535:intron | 10.0% |
| !! | CAATAGTATAATATATTATT+GGG | - | chr4.2:64042926-64042945 | MS.gene71535:CDS | 10.0% |
| !! | GATTATTAAAAAAGATAATT+TGG | + | chr4.2:64043491-64043510 | None:intergenic | 10.0% |
| !! | TAATATATATGTAATGAATA+TGG | + | chr4.2:64044346-64044365 | None:intergenic | 10.0% |
| !! | TAATTTAAATATGTTTATGA+TGG | + | chr4.2:64043160-64043179 | None:intergenic | 10.0% |
| !! | AAACTAGATAGTATTATTAA+AGG | - | chr4.2:64041869-64041888 | MS.gene71535:intron | 15.0% |
| !! | AGTAAATTATATAGAAATGA+AGG | + | chr4.2:64045071-64045090 | None:intergenic | 15.0% |
| !! | ATTAAAAAAGATAATTTGGA+AGG | + | chr4.2:64043487-64043506 | None:intergenic | 15.0% |
| !! | TTAAAAAAGATAATTTGGAA+GGG | + | chr4.2:64043486-64043505 | None:intergenic | 15.0% |
| !! | TTTAATAATACTATCTAGTT+TGG | + | chr4.2:64041870-64041889 | None:intergenic | 15.0% |
| !!! | ACAAATTTTGTTTTTATATC+AGG | - | chr4.2:64042839-64042858 | MS.gene71535:intron | 15.0% |
| !!! | TGATACAATACATTATATTT+TGG | - | chr4.2:64043248-64043267 | MS.gene71535:intron | 15.0% |
| !! | ATAGTTATTATGCATTATTG+AGG | + | chr4.2:64044849-64044868 | None:intergenic | 20.0% |
| !! | ATTAAAGGTTAAATTGTAAG+TGG | - | chr4.2:64041884-64041903 | MS.gene71535:intron | 20.0% |
| !! | TATTAAGAGAAAAAGGTAAT+TGG | - | chr4.2:64042421-64042440 | MS.gene71535:intron | 20.0% |
| !! | TTAACCACTTATTATCAAAT+TGG | + | chr4.2:64041923-64041942 | None:intergenic | 20.0% |
| !!! | ATTGGTATTGTTATTCTAAA+TGG | - | chr4.2:64042597-64042616 | MS.gene71535:intron | 20.0% |
| !!! | ATTTAGAATAACAATACCAA+TGG | + | chr4.2:64042598-64042617 | None:intergenic | 20.0% |
| !!! | TAAATATGTTTATGATGGAA+TGG | + | chr4.2:64043155-64043174 | None:intergenic | 20.0% |
| !!! | TGGAACTTTTGTTTTATAAT+AGG | - | chr4.2:64042887-64042906 | MS.gene71535:intron | 20.0% |
| !!! | TTATTTTACTTTTTCATGCT+TGG | - | chr4.2:64043707-64043726 | MS.gene71535:intron | 20.0% |
| !!! | TTCATTAGTTTTTATCTCAT+TGG | + | chr4.2:64042229-64042248 | None:intergenic | 20.0% |
| !!! | TTTAAGATAATCTTCCTTTA+AGG | - | chr4.2:64044521-64044540 | MS.gene71535:intron | 20.0% |
| !!! | TTTAGAATAACAATACCAAT+GGG | + | chr4.2:64042597-64042616 | None:intergenic | 20.0% |
| ! | AATATATAGACCAATTTGAC+CGG | - | chr4.2:64041942-64041961 | MS.gene71535:CDS | 25.0% |
| ! | AATCGACATTTAATACATGA+CGG | + | chr4.2:64042276-64042295 | None:intergenic | 25.0% |
| ! | ATTTATGTTCTCCAATCAAT+TGG | + | chr4.2:64044484-64044503 | None:intergenic | 25.0% |
| ! | CTTATTGCTAAATTCTTCTT+CGG | - | chr4.2:64043631-64043650 | MS.gene71535:intron | 25.0% |
| ! | GAACTTCAAAACAAAAGAAT+TGG | - | chr4.2:64044064-64044083 | MS.gene71535:intron | 25.0% |
| ! | GATTCATGTAACAAATAATG+AGG | + | chr4.2:64045113-64045132 | None:intergenic | 25.0% |
| ! | TATATGTTTGCTTCGTTAAT+AGG | - | chr4.2:64042079-64042098 | MS.gene71535:intron | 25.0% |
| ! | TATTCACTTATACAGAGAAT+AGG | - | chr4.2:64043809-64043828 | MS.gene71535:intron | 25.0% |
| ! | TTAGAATAACAATACCAATG+GGG | + | chr4.2:64042596-64042615 | None:intergenic | 25.0% |
| ! | TTGTAGTATATTCATCAATG+AGG | - | chr4.2:64044642-64044661 | MS.gene71535:intron | 25.0% |
| !! | TTCTTTATTTAGTTTCCCAT+AGG | - | chr4.2:64042491-64042510 | MS.gene71535:intron | 25.0% |
| !! | TTTTCATGGTAACTAAAGAT+AGG | - | chr4.2:64044390-64044409 | MS.gene71535:intron | 25.0% |
| !!! | GTAACAATGAAGTTTGTTAA+TGG | - | chr4.2:64043013-64043032 | MS.gene71535:intron | 25.0% |
| AAAGTTTACACATGAAAGCA+AGG | - | chr4.2:64041689-64041708 | MS.gene71535:intron | 30.0% | |
| AACGCAACATTCATTACAAA+TGG | + | chr4.2:64043341-64043360 | None:intergenic | 30.0% | |
| AACTATATAGTAGGACTGTA+GGG | - | chr4.2:64044248-64044267 | MS.gene71535:intron | 30.0% | |
| AAGCATAAAATCTGCTACAA+TGG | + | chr4.2:64043554-64043573 | None:intergenic | 30.0% | |
| AATAAGATTCACTCCAACTA+AGG | + | chr4.2:64042520-64042539 | None:intergenic | 30.0% | |
| AATTAGACTTGTATTGCCAA+TGG | - | chr4.2:64042107-64042126 | MS.gene71535:intron | 30.0% | |
| ACACCATAATGACATTGTTA+AGG | + | chr4.2:64044035-64044054 | None:intergenic | 30.0% | |
| AGCAAACATATAACTGATCT+AGG | + | chr4.2:64042071-64042090 | None:intergenic | 30.0% | |
| ATTTGACCGGTTAAAAAAGT+CGG | - | chr4.2:64041955-64041974 | MS.gene71535:CDS | 30.0% | |
| CACCATAATGACATTGTTAA+GGG | + | chr4.2:64044034-64044053 | None:intergenic | 30.0% | |
| CATGTTCACAACTATATAGT+AGG | - | chr4.2:64044239-64044258 | MS.gene71535:intron | 30.0% | |
| CATTCATTACAAATGGATGA+TGG | + | chr4.2:64043334-64043353 | None:intergenic | 30.0% | |
| TACAAAACCAAGGACTAATT+TGG | - | chr4.2:64042027-64042046 | MS.gene71535:CDS | 30.0% | |
| TAGATGGATAAAACATGGTT+GGG | - | chr4.2:64042753-64042772 | MS.gene71535:intron | 30.0% | |
| TAGCTAATTTCCAAAGTAAG+CGG | + | chr4.2:64044426-64044445 | None:intergenic | 30.0% | |
| TAGCTGGAATTATTGAACAA+CGG | - | chr4.2:64044935-64044954 | MS.gene71535:intron | 30.0% | |
| TCAATCATGTAGCACTATAT+TGG | + | chr4.2:64041632-64041651 | None:intergenic | 30.0% | |
| TTCAGAGTTTCTATCTAAAC+TGG | + | chr4.2:64043071-64043090 | None:intergenic | 30.0% | |
| TTTCATGCTTGGATAGATAT+TGG | - | chr4.2:64043718-64043737 | MS.gene71535:intron | 30.0% | |
| ! | AAGCATAAGCCTGAATTTTA+GGG | + | chr4.2:64044564-64044583 | None:intergenic | 30.0% |
| ! | ATTAGACTAAGCAGTTTTCA+TGG | - | chr4.2:64044376-64044395 | MS.gene71535:intron | 30.0% |
| ! | GAGACCAATTTGATAATAAG+TGG | - | chr4.2:64041916-64041935 | MS.gene71535:intron | 30.0% |
| ! | TAAGCATAAGCCTGAATTTT+AGG | + | chr4.2:64044565-64044584 | None:intergenic | 30.0% |
| ! | TACAATTTTCTAGATGCAAC+AGG | + | chr4.2:64043280-64043299 | None:intergenic | 30.0% |
| ! | TCTATGCAACGTTTTTACAT+CGG | + | chr4.2:64044136-64044155 | None:intergenic | 30.0% |
| !! | ATTAGTGATTTTGAGAGTCA+GGG | - | chr4.2:64041843-64041862 | MS.gene71535:intron | 30.0% |
| !! | TATTAGTGATTTTGAGAGTC+AGG | - | chr4.2:64041842-64041861 | MS.gene71535:intron | 30.0% |
| !! | TGAAGTTTGTTAATGGTTAC+AGG | - | chr4.2:64043020-64043039 | MS.gene71535:intron | 30.0% |
| !! | TTAGTTTTTATCTCATTGGC+AGG | + | chr4.2:64042225-64042244 | None:intergenic | 30.0% |
| !!! | AAATTAGTCCTTGGTTTTGT+AGG | + | chr4.2:64042028-64042047 | None:intergenic | 30.0% |
| !!! | AATGCTTTTCAGGTTAACAA+CGG | - | chr4.2:64043664-64043683 | MS.gene71535:intron | 30.0% |
| !!! | AATTAGTCCTTGGTTTTGTA+GGG | + | chr4.2:64042027-64042046 | None:intergenic | 30.0% |
| !!! | ACTTTTTTAACCGGTCAAAT+TGG | + | chr4.2:64041955-64041974 | None:intergenic | 30.0% |
| !!! | TAACCTGAAAAGCATTTTCA+GGG | + | chr4.2:64043660-64043679 | None:intergenic | 30.0% |
| !!! | TTAACCTGAAAAGCATTTTC+AGG | + | chr4.2:64043661-64043680 | None:intergenic | 30.0% |
| AATAACAATACCAATGGGGT+TGG | + | chr4.2:64042592-64042611 | None:intergenic | 35.0% | |
| ACATGAATCTTCGCATGAAT+AGG | - | chr4.2:64045124-64045143 | MS.gene71535:intron | 35.0% | |
| AGACTTCAGTTGCTAAAGAT+TGG | + | chr4.2:64043227-64043246 | None:intergenic | 35.0% | |
| ATAACAATACCAATGGGGTT+GGG | + | chr4.2:64042591-64042610 | None:intergenic | 35.0% | |
| ATTCAGGCTTATGCTTAACT+CGG | - | chr4.2:64044568-64044587 | MS.gene71535:intron | 35.0% | |
| ATTGGGTCTTGATTCTTGAA+CGG | - | chr4.2:64042943-64042962 | MS.gene71535:intron | 35.0% | |
| CAACTATATAGTAGGACTGT+AGG | - | chr4.2:64044247-64044266 | MS.gene71535:intron | 35.0% | |
| CACCATATTTCAGTTTACCT+AGG | + | chr4.2:64042393-64042412 | None:intergenic | 35.0% | |
| CTAATCTCTGCTGAAGAATT+TGG | + | chr4.2:64042814-64042833 | None:intergenic | 35.0% | |
| CTCCTAGGTAAACTGAAATA+TGG | - | chr4.2:64042388-64042407 | MS.gene71535:intron | 35.0% | |
| GACCCTTAACAATGTCATTA+TGG | - | chr4.2:64044029-64044048 | MS.gene71535:intron | 35.0% | |
| GTAGATGGATAAAACATGGT+TGG | - | chr4.2:64042752-64042771 | MS.gene71535:intron | 35.0% | |
| GTGAACATGAGTGCAAAATA+TGG | + | chr4.2:64044228-64044247 | None:intergenic | 35.0% | |
| GTTGGAGTGAATCTTATTCA+AGG | - | chr4.2:64042522-64042541 | MS.gene71535:intron | 35.0% | |
| TAACTTTGTCAACACTCAAC+AGG | - | chr4.2:64043766-64043785 | MS.gene71535:intron | 35.0% | |
| TAATGACATTGTTAAGGGTC+TGG | + | chr4.2:64044029-64044048 | None:intergenic | 35.0% | |
| TAGCAACTCAGTTGTACTTA+CGG | + | chr4.2:64042644-64042663 | None:intergenic | 35.0% | |
| TGAACAACCAAATTAGTCCT+TGG | + | chr4.2:64042037-64042056 | None:intergenic | 35.0% | |
| TTTGACCGGTTAAAAAAGTC+GGG | - | chr4.2:64041956-64041975 | MS.gene71535:CDS | 35.0% | |
| ! | ACCATGTTTTATCCATCTAC+AGG | + | chr4.2:64042752-64042771 | None:intergenic | 35.0% |
| ! | AGCATAAGCCTGAATTTTAG+GGG | + | chr4.2:64044563-64044582 | None:intergenic | 35.0% |
| ! | CCATGTTTTATCCATCTACA+GGG | + | chr4.2:64042751-64042770 | None:intergenic | 35.0% |
| ! | TAGCAGATTTTATGCTTGTG+TGG | - | chr4.2:64043557-64043576 | MS.gene71535:intron | 35.0% |
| ! | TCGTACTGGCAATTGAATTT+GGG | - | chr4.2:64042698-64042717 | MS.gene71535:intron | 35.0% |
| ! | TGATAAATCTTTTGCTGACG+AGG | - | chr4.2:64044736-64044755 | MS.gene71535:intron | 35.0% |
| ! | TTATGATGGAATGGAGTTGT+TGG | + | chr4.2:64043146-64043165 | None:intergenic | 35.0% |
| ! | TTCGTACTGGCAATTGAATT+TGG | - | chr4.2:64042697-64042716 | MS.gene71535:intron | 35.0% |
| !! | ACGTTTTTACATCGGTTGAA+AGG | + | chr4.2:64044128-64044147 | None:intergenic | 35.0% |
| !! | CACTTAACATGAGCTTGTTT+TGG | + | chr4.2:64044981-64045000 | None:intergenic | 35.0% |
| !! | GAAACTCTGAAGAAGTACTT+TGG | - | chr4.2:64043080-64043099 | MS.gene71535:CDS | 35.0% |
| !! | TGATTTTGTTTGTGCTGATG+TGG | - | chr4.2:64043418-64043437 | MS.gene71535:intron | 35.0% |
| !!! | AGATTCCCGACTTTTTTAAC+CGG | + | chr4.2:64041964-64041983 | None:intergenic | 35.0% |
| AACATTGTCACCGCTTACTT+TGG | - | chr4.2:64044413-64044432 | MS.gene71535:intron | 40.0% | |
| AACTGATAGAGAAAGCAACG+CGG | + | chr4.2:64044174-64044193 | None:intergenic | 40.0% | |
| AAGATTGGCATGTAGCTGAA+TGG | + | chr4.2:64043212-64043231 | None:intergenic | 40.0% | |
| AATTGGATTCCAGCACTCAT+AGG | + | chr4.2:64044467-64044486 | None:intergenic | 40.0% | |
| AATTGTCTCTGATCTCTACC+AGG | - | chr4.2:64044902-64044921 | MS.gene71535:intron | 40.0% | |
| ACACCAGTACCAATCTGAAA+AGG | + | chr4.2:64044683-64044702 | None:intergenic | 40.0% | |
| ACCAGGTATCAAATTCTAGC+TGG | - | chr4.2:64044919-64044938 | MS.gene71535:intron | 40.0% | |
| ACCTAGGAGCTACACTAATT+GGG | + | chr4.2:64042377-64042396 | None:intergenic | 40.0% | |
| ACTCCAACTAAGGTAACCTA+TGG | + | chr4.2:64042510-64042529 | None:intergenic | 40.0% | |
| AGAACCGGAAACACTTTCTT+GGG | - | chr4.2:64045018-64045037 | MS.gene71535:intron | 40.0% | |
| AGCAACTCAGTTGTACTTAC+GGG | + | chr4.2:64042643-64042662 | None:intergenic | 40.0% | |
| ATGGATAAAACATGGTTGGG+AGG | - | chr4.2:64042756-64042775 | MS.gene71535:intron | 40.0% | |
| ATTGGATTCCAGCACTCATA+GGG | + | chr4.2:64044466-64044485 | None:intergenic | 40.0% | |
| CAAAGCAACAAAAAGCGACA+AGG | + | chr4.2:64044292-64044311 | None:intergenic | 40.0% | |
| CAAGCATCACTTGACCTTAA+AGG | + | chr4.2:64044538-64044557 | None:intergenic | 40.0% | |
| CATAATCATCTCTTCTGCAG+CGG | - | chr4.2:64043908-64043927 | MS.gene71535:intron | 40.0% | |
| CCCTGTAGATGGATAAAACA+TGG | - | chr4.2:64042748-64042767 | MS.gene71535:intron | 40.0% | |
| CGATGGACATTTGATAAGCT+GGG | - | chr4.2:64042667-64042686 | MS.gene71535:intron | 40.0% | |
| CTATCATGAGTAGATGGAGA+CGG | + | chr4.2:64042142-64042161 | None:intergenic | 40.0% | |
| CTCCAACTAAGGTAACCTAT+GGG | + | chr4.2:64042509-64042528 | None:intergenic | 40.0% | |
| GAAGAATTTGGATGGTCAGT+TGG | + | chr4.2:64042802-64042821 | None:intergenic | 40.0% | |
| GAATCTTCGCATGAATAGGT+GGG | - | chr4.2:64045128-64045147 | MS.gene71535:intron | 40.0% | |
| GAATTTGGGTCCCTTGATTA+AGG | - | chr4.2:64042712-64042731 | MS.gene71535:intron | 40.0% | |
| GAGCTAAGCTATTTGCAGTT+GGG | - | chr4.2:64043935-64043954 | MS.gene71535:intron | 40.0% | |
| GAGTCCGATACCTTAATCAA+GGG | + | chr4.2:64042725-64042744 | None:intergenic | 40.0% | |
| GATGGACATTTGATAAGCTG+GGG | - | chr4.2:64042668-64042687 | MS.gene71535:intron | 40.0% | |
| GCATGTCTATCATGAGTAGA+TGG | + | chr4.2:64042148-64042167 | None:intergenic | 40.0% | |
| GTTTACATTTCAGACTGCTG+CGG | - | chr4.2:64043358-64043377 | MS.gene71535:CDS | 40.0% | |
| TACCTAGGAGCTACACTAAT+TGG | + | chr4.2:64042378-64042397 | None:intergenic | 40.0% | |
| TAGAACCGGAAACACTTTCT+TGG | - | chr4.2:64045017-64045036 | MS.gene71535:intron | 40.0% | |
| TATCATGAGTAGATGGAGAC+GGG | + | chr4.2:64042141-64042160 | None:intergenic | 40.0% | |
| TCCAGCTAGAATTTGATACC+TGG | + | chr4.2:64044923-64044942 | None:intergenic | 40.0% | |
| TCGATGGACATTTGATAAGC+TGG | - | chr4.2:64042666-64042685 | MS.gene71535:intron | 40.0% | |
| TCTCTGCTGAAGAATTTGGA+TGG | + | chr4.2:64042810-64042829 | None:intergenic | 40.0% | |
| TGAATCTTCGCATGAATAGG+TGG | - | chr4.2:64045127-64045146 | MS.gene71535:intron | 40.0% | |
| TGAGTCCGATACCTTAATCA+AGG | + | chr4.2:64042726-64042745 | None:intergenic | 40.0% | |
| TGCTTGTTCCCCTAAAATTC+AGG | - | chr4.2:64044552-64044571 | MS.gene71535:intron | 40.0% | |
| TGGATAAAACATGGTTGGGA+GGG | - | chr4.2:64042757-64042776 | MS.gene71535:intron | 40.0% | |
| TGGCAGTATCTAGCAACTTA+AGG | - | chr4.2:64044807-64044826 | MS.gene71535:intron | 40.0% | |
| TGTGTCAGTAACTCGTTGTT+GGG | - | chr4.2:64041728-64041747 | MS.gene71535:CDS | 40.0% | |
| TTCAGGCTTATGCTTAACTC+GGG | - | chr4.2:64044569-64044588 | MS.gene71535:intron | 40.0% | |
| TTCCCATAGGTTACCTTAGT+TGG | - | chr4.2:64042504-64042523 | MS.gene71535:intron | 40.0% | |
| TTGGGTCTTGATTCTTGAAC+GGG | - | chr4.2:64042944-64042963 | MS.gene71535:intron | 40.0% | |
| ! | AGTGCTGGAATCCAATTGAT+TGG | - | chr4.2:64044470-64044489 | MS.gene71535:intron | 40.0% |
| ! | TATCAACGAGTGTTGCCTAT+GGG | - | chr4.2:64044777-64044796 | MS.gene71535:intron | 40.0% |
| ! | TTATCAACGAGTGTTGCCTA+TGG | - | chr4.2:64044776-64044795 | MS.gene71535:intron | 40.0% |
| ! | TTGCCTTTTCAGATTGGTAC+TGG | - | chr4.2:64044677-64044696 | MS.gene71535:intron | 40.0% |
| !! | ACAGAGAATAGGTGCTATTG+TGG | - | chr4.2:64043820-64043839 | MS.gene71535:intron | 40.0% |
| !! | ATCTGCTTTGCTGTTAGAAC+CGG | - | chr4.2:64045003-64045022 | MS.gene71535:intron | 40.0% |
| !! | CAAACGCATTGATTAATGCG+CGG | - | chr4.2:64044705-64044724 | MS.gene71535:intron | 40.0% |
| !! | CATGACTTGCCTTTTCAGAT+TGG | - | chr4.2:64044671-64044690 | MS.gene71535:intron | 40.0% |
| !! | GCAACACTCGTTGATAATAC+CGG | + | chr4.2:64044773-64044792 | None:intergenic | 40.0% |
| !!! | CTTGTCGCTTTTTGTTGCTT+TGG | - | chr4.2:64044290-64044309 | MS.gene71535:intron | 40.0% |
| AAGCTATTTGCAGTTGGGAC+TGG | - | chr4.2:64043940-64043959 | MS.gene71535:intron | 45.0% | |
| ACACATGAAAGCAAGGCAAG+CGG | - | chr4.2:64041696-64041715 | MS.gene71535:intron | 45.0% | |
| ACTCATAGGGAAGTAGAGAG+AGG | + | chr4.2:64044453-64044472 | None:intergenic | 45.0% | |
| CATTTGATAAGCTGGGGTGT+TGG | - | chr4.2:64042674-64042693 | MS.gene71535:intron | 45.0% | |
| CTAATTCTGACAGCAGAAGG+AGG | - | chr4.2:64042168-64042187 | MS.gene71535:intron | 45.0% | |
| CTCCTTCTGCTGTCAGAATT+AGG | + | chr4.2:64042170-64042189 | None:intergenic | 45.0% | |
| CTGTGTCAGTAACTCGTTGT+TGG | - | chr4.2:64041727-64041746 | MS.gene71535:CDS | 45.0% | |
| CTTTGTCAACACTCAACAGG+TGG | - | chr4.2:64043769-64043788 | MS.gene71535:intron | 45.0% | |
| GATTCTTGAACGGGGAACAT+AGG | - | chr4.2:64042953-64042972 | MS.gene71535:intron | 45.0% | |
| GGAGCTAAGCTATTTGCAGT+TGG | - | chr4.2:64043934-64043953 | MS.gene71535:intron | 45.0% | |
| GGATAAAACATGGTTGGGAG+GGG | - | chr4.2:64042758-64042777 | MS.gene71535:intron | 45.0% | |
| GGGGAACATAGGATGGTAAA+GGG | - | chr4.2:64042964-64042983 | MS.gene71535:intron | 45.0% | |
| GGGTCCCTTGATTAAGGTAT+CGG | - | chr4.2:64042718-64042737 | MS.gene71535:intron | 45.0% | |
| GGTTGGAGTCCAGAAGATAA+GGG | - | chr4.2:64045167-64045186 | MS.gene71535:CDS | 45.0% | |
| TACTGCCATGTAAACCCCAT+AGG | + | chr4.2:64044795-64044814 | None:intergenic | 45.0% | |
| TATGCTTAACTCGGGTGTCT+TGG | - | chr4.2:64044577-64044596 | MS.gene71535:intron | 45.0% | |
| TCCCAATTAGTGTAGCTCCT+AGG | - | chr4.2:64042373-64042392 | MS.gene71535:intron | 45.0% | |
| TGCCTAATTCTGACAGCAGA+AGG | - | chr4.2:64042165-64042184 | MS.gene71535:intron | 45.0% | |
| TGGGTCTTGATTCTTGAACG+GGG | - | chr4.2:64042945-64042964 | MS.gene71535:intron | 45.0% | |
| TGTTGCCTATGGGGTTTACA+TGG | - | chr4.2:64044787-64044806 | MS.gene71535:intron | 45.0% | |
| ! | AGCAATAAGTCCAGCACTGA+CGG | + | chr4.2:64043620-64043639 | None:intergenic | 45.0% |
| ! | ATCAACGAGTGTTGCCTATG+GGG | - | chr4.2:64044778-64044797 | MS.gene71535:intron | 45.0% |
| ! | CTGCCCTGAAAATGCTTTTC+AGG | - | chr4.2:64043654-64043673 | MS.gene71535:intron | 45.0% |
| !! | CGGTGTTGGCATCTTTACAA+AGG | - | chr4.2:64041563-64041582 | MS.gene71535:CDS | 45.0% |
| !!! | AGCTTGTTTTGGTGCAGCAA+AGG | + | chr4.2:64044970-64044989 | None:intergenic | 45.0% |
| !! | ATAAACATATTTAAATTATA+AGG | - | chr4.2:64043162-64043181 | MS.gene71535:CDS | 5.0% |
| !! | TTATTGAAAATATATATAAT+TGG | - | chr4.2:64042867-64042886 | MS.gene71535:intron | 5.0% |
| AGGGGAGACTCTACTAAAGG+TGG | - | chr4.2:64042776-64042795 | MS.gene71535:intron | 50.0% | |
| ATTTCAGACTGCTGCGGAGT+TGG | - | chr4.2:64043364-64043383 | MS.gene71535:intron | 50.0% | |
| CAACACTCAACAGGTGGCTT+TGG | - | chr4.2:64043775-64043794 | MS.gene71535:intron | 50.0% | |
| CAACTGAGTTGCTAGCTCGA+TGG | - | chr4.2:64042650-64042669 | MS.gene71535:intron | 50.0% | |
| CACATGAAAGCAAGGCAAGC+GGG | - | chr4.2:64041697-64041716 | MS.gene71535:intron | 50.0% | |
| CGGGGAACATAGGATGGTAA+AGG | - | chr4.2:64042963-64042982 | MS.gene71535:intron | 50.0% | |
| CTCTACTTCCCTATGAGTGC+TGG | - | chr4.2:64044455-64044474 | MS.gene71535:intron | 50.0% | |
| CTTGAACGGGGAACATAGGA+TGG | - | chr4.2:64042957-64042976 | MS.gene71535:intron | 50.0% | |
| GGGTTGGAGTCCAGAAGATA+AGG | - | chr4.2:64045166-64045185 | MS.gene71535:CDS | 50.0% | |
| TCATCTCTTCTGCAGCGGAA+CGG | - | chr4.2:64043913-64043932 | MS.gene71535:intron | 50.0% | |
| TCGGACTCAAACCCTGTAGA+TGG | - | chr4.2:64042737-64042756 | MS.gene71535:intron | 50.0% | |
| TCTTCGCATGAATAGGTGGG+TGG | - | chr4.2:64045131-64045150 | MS.gene71535:intron | 50.0% | |
| TTTGCTAGACCCAACCCCAT+TGG | - | chr4.2:64042579-64042598 | MS.gene71535:intron | 50.0% | |
| ! | ATCTTTTGCTGACGAGGCAG+AGG | - | chr4.2:64044742-64044761 | MS.gene71535:intron | 50.0% |
| !! | ATAAGTCCAGCACTGACGGA+AGG | + | chr4.2:64043616-64043635 | None:intergenic | 50.0% |
| !! | CGAGCCCAAGAAAGTGTTTC+CGG | + | chr4.2:64045025-64045044 | None:intergenic | 50.0% |
| !! | CGCATTGATTAATGCGCGGA+AGG | - | chr4.2:64044709-64044728 | MS.gene71535:intron | 50.0% |
| GGGAGGGGAGACTCTACTAA+AGG | - | chr4.2:64042773-64042792 | MS.gene71535:intron | 55.0% | |
| GGTGGTCGTAGAGAAACCGT+CGG | + | chr4.2:64043592-64043611 | None:intergenic | 55.0% | |
| ! | AGTTGGGACTGGTGCATCAC+TGG | - | chr4.2:64043951-64043970 | MS.gene71535:intron | 55.0% |
| ! | GTGGATTATGCTCGCTGGGT+TGG | - | chr4.2:64045150-64045169 | MS.gene71535:intron | 55.0% |
| ! | TGACGAGGCAGAGGAAGTAC+CGG | - | chr4.2:64044751-64044770 | MS.gene71535:intron | 55.0% |
| !! | ACTCAACAGGTGGCTTTGGC+TGG | - | chr4.2:64043779-64043798 | MS.gene71535:intron | 55.0% |
| !! | GAGAGCGCCCTACAAAACCA+AGG | - | chr4.2:64042017-64042036 | MS.gene71535:CDS | 55.0% |
| !! | GTGGGTGGATTATGCTCGCT+GGG | - | chr4.2:64045146-64045165 | MS.gene71535:intron | 55.0% |
| CGTAGAGAAACCGTCGGAGC+AGG | + | chr4.2:64043586-64043605 | None:intergenic | 60.0% | |
| GAGACGGGCGTATGAGCCAT+TGG | + | chr4.2:64042126-64042145 | None:intergenic | 60.0% | |
| TGTGTGGCTTCCTGCTCCGA+CGG | - | chr4.2:64043573-64043592 | MS.gene71535:intron | 60.0% | |
| !! | AGTCCAGCACTGACGGAAGG+TGG | + | chr4.2:64043613-64043632 | None:intergenic | 60.0% |
| !! | GCTGGGGTGTTGGTTCGTAC+TGG | - | chr4.2:64042684-64042703 | MS.gene71535:intron | 60.0% |
| !! | GGTGGGTGGATTATGCTCGC+TGG | - | chr4.2:64045145-64045164 | MS.gene71535:intron | 60.0% |
| CCACCACCTTCCGTCAGTGC+TGG | - | chr4.2:64043607-64043626 | MS.gene71535:intron | 65.0% | |
| !! | CCAGCACTGACGGAAGGTGG+TGG | + | chr4.2:64043610-64043629 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 64041555 | 64045194 | 64041555 | ID=MS.gene71535 |
| chr4.2 | mRNA | 64041555 | 64045194 | 64041555 | ID=MS.gene71535.t1;Parent=MS.gene71535 |
| chr4.2 | exon | 64045165 | 64045194 | 64045165 | ID=MS.gene71535.t1.exon1;Parent=MS.gene71535.t1 |
| chr4.2 | CDS | 64045165 | 64045194 | 64045165 | ID=cds.MS.gene71535.t1;Parent=MS.gene71535.t1 |
| chr4.2 | exon | 64043310 | 64043378 | 64043310 | ID=MS.gene71535.t1.exon2;Parent=MS.gene71535.t1 |
| chr4.2 | CDS | 64043310 | 64043378 | 64043310 | ID=cds.MS.gene71535.t1;Parent=MS.gene71535.t1 |
| chr4.2 | exon | 64043074 | 64043205 | 64043074 | ID=MS.gene71535.t1.exon3;Parent=MS.gene71535.t1 |
| chr4.2 | CDS | 64043074 | 64043205 | 64043074 | ID=cds.MS.gene71535.t1;Parent=MS.gene71535.t1 |
| chr4.2 | exon | 64042908 | 64042961 | 64042908 | ID=MS.gene71535.t1.exon4;Parent=MS.gene71535.t1 |
| chr4.2 | CDS | 64042908 | 64042961 | 64042908 | ID=cds.MS.gene71535.t1;Parent=MS.gene71535.t1 |
| chr4.2 | exon | 64042777 | 64042821 | 64042777 | ID=MS.gene71535.t1.exon5;Parent=MS.gene71535.t1 |
| chr4.2 | CDS | 64042777 | 64042821 | 64042777 | ID=cds.MS.gene71535.t1;Parent=MS.gene71535.t1 |
| chr4.2 | exon | 64041921 | 64042060 | 64041921 | ID=MS.gene71535.t1.exon6;Parent=MS.gene71535.t1 |
| chr4.2 | CDS | 64041921 | 64042060 | 64041921 | ID=cds.MS.gene71535.t1;Parent=MS.gene71535.t1 |
| chr4.2 | exon | 64041700 | 64041825 | 64041700 | ID=MS.gene71535.t1.exon7;Parent=MS.gene71535.t1 |
| chr4.2 | CDS | 64041700 | 64041825 | 64041700 | ID=cds.MS.gene71535.t1;Parent=MS.gene71535.t1 |
| chr4.2 | exon | 64041555 | 64041603 | 64041555 | ID=MS.gene71535.t1.exon8;Parent=MS.gene71535.t1 |
| chr4.2 | CDS | 64041555 | 64041603 | 64041555 | ID=cds.MS.gene71535.t1;Parent=MS.gene71535.t1 |
| Gene Sequence |
| Protein sequence |
