AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene067495


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067495.t1 MTR_2g105480 96.429 420 9 3 1 416 1 418 0.0 828
MS.gene067495.t1 MTR_2g105480 95.763 354 9 3 1 350 1 352 0.0 694
MS.gene067495.t1 MTR_2g105480 95.000 300 9 3 1 296 1 298 0.0 586
MS.gene067495.t1 MTR_3g068030 49.422 346 161 9 73 412 82 419 9.73e-110 330
MS.gene067495.t1 MTR_3g068030 49.422 346 161 9 73 412 68 405 1.26e-109 329
MS.gene067495.t1 MTR_4g021210 54.110 292 127 6 121 411 134 419 1.28e-109 331
MS.gene067495.t1 MTR_5g080450 48.555 346 164 9 73 412 82 419 2.30e-107 325
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067495.t1 AT1G73110 73.881 402 94 1 26 416 31 432 0.0 634
MS.gene067495.t1 AT1G73110 78.302 318 69 0 99 416 18 335 0.0 539
MS.gene067495.t1 AT2G39730 43.103 406 211 11 12 411 26 417 1.59e-103 314
MS.gene067495.t1 AT2G39730 43.103 406 211 11 12 411 26 417 1.95e-103 314
MS.gene067495.t1 AT2G39730 43.210 405 210 11 13 411 27 417 4.81e-103 314

Find 71 sgRNAs with CRISPR-Local

Find 348 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTTTGATTCTTGGTATT+TGG 0.110335 2.4:+252468 MS.gene067495:CDS
TCCTTTGATTCTTGGTATTT+GGG 0.170575 2.4:+252469 MS.gene067495:CDS
GCTAAAGTTCCTTTGATTCT+TGG 0.197912 2.4:+252461 MS.gene067495:CDS
TCATTTCCTGTTACAATGAT+TGG 0.261969 2.4:-253316 None:intergenic
TCTTAGTGGGTTGATGATAT+TGG 0.294945 2.4:+255847 MS.gene067495:intron
CGCTCACGAATCAATCTTCC+AGG 0.332433 2.4:-252602 None:intergenic
TGACCAATACTAACTCTTGT+AGG 0.349127 2.4:-253259 None:intergenic
AGAATTCCAATCATTGTAAC+AGG 0.372987 2.4:+253310 MS.gene067495:CDS
TCTGAAAATGCTGGTGAGCC+TGG 0.386060 2.4:+252584 MS.gene067495:CDS
CAAAGAACAACAGTTGATAA+TGG 0.386217 2.4:+257257 MS.gene067495:CDS
ATCATTGACGATGTCTTTGC+CGG 0.392037 2.4:+252281 MS.gene067495:CDS
TGAATGAGAATGAATTAGAA+TGG 0.392130 2.4:-252070 None:intergenic
CAATATTCAGTATATCTTCC+TGG 0.396347 2.4:-253696 None:intergenic
GAATAAATACAGGAAGATTC+TGG 0.403777 2.4:-255915 None:intergenic
GTTATCAGAGCAATCTTCTT+GGG 0.408586 2.4:+252169 MS.gene067495:CDS
GCAATCTTCTTGGGAAACTA+AGG 0.416952 2.4:+252178 MS.gene067495:CDS
ATCGATGCTTTACTTGAGTC+AGG 0.418408 2.4:+257222 MS.gene067495:CDS
TCCCCAGCAGACATAATAAC+AGG 0.420434 2.4:-252554 None:intergenic
CTTGGTATTTGGGGTGGTAA+AGG 0.421304 2.4:+252479 MS.gene067495:CDS
AGTTATCAGAGCAATCTTCT+TGG 0.427745 2.4:+252168 MS.gene067495:CDS
GTCTCTGCCGAGAAAATTGC+CGG 0.437752 2.4:-252300 None:intergenic
GTCAACAATCAAATTGTTGT+TGG 0.443707 2.4:+253211 MS.gene067495:CDS
GATGCTGGTCTTGGTCGATT+TGG 0.450176 2.4:+252985 MS.gene067495:CDS
TACGAATAAGTACCTTGATT+AGG 0.450433 2.4:-253784 None:intergenic
TCAACAATCAAATTGTTGTT+GGG 0.454211 2.4:+253212 MS.gene067495:CDS
GAGTTAGTATTGGTCAAGAT+TGG 0.467534 2.4:+253266 MS.gene067495:CDS
TTCAGTATATCTTCCTGGTT+AGG 0.472744 2.4:-253691 None:intergenic
GAATGAGAATGAATTAGAAT+GGG 0.480283 2.4:-252069 None:intergenic
ACCTCTGGAGGAATAAATAC+AGG 0.480480 2.4:-255925 None:intergenic
AATGACATTGATGCTGGTCT+TGG 0.482478 2.4:+252976 MS.gene067495:CDS
ATGAGAAAGATGGCATATCC+AGG 0.482603 2.4:+253731 MS.gene067495:CDS
CAATGTAATAATCTCCTTGA+AGG 0.484497 2.4:-252373 None:intergenic
GAACCTGTTATTATGTCTGC+TGG 0.485284 2.4:+252551 MS.gene067495:CDS
AGATCATTTCAATACCTTCA+AGG 0.488011 2.4:+252359 MS.gene067495:CDS
GAATTAGAATGGGAAGAAGT+TGG 0.490696 2.4:-252059 None:intergenic
ATCCTTCCATCACGTATCAA+TGG 0.491684 2.4:-253358 None:intergenic
AACCTGTTATTATGTCTGCT+GGG 0.507623 2.4:+252552 MS.gene067495:CDS
TGAACTTATCTTTCGTGCCA+TGG 0.507643 2.4:+252523 MS.gene067495:CDS
TTGATTCTTGGTATTTGGGG+TGG 0.509342 2.4:+252473 MS.gene067495:CDS
CAAATTTCTCAAAAGAAGAA+AGG 0.512041 2.4:+255891 MS.gene067495:CDS
CAAAGAATGTATGAGAAAGA+TGG 0.523243 2.4:+253721 MS.gene067495:CDS
TAGCATTGAGGAGATGAGAA+AGG 0.523867 2.4:-252442 None:intergenic
GTGGCACAGGCAGCCTAACC+AGG 0.526609 2.4:+253678 MS.gene067495:intron
CCTTTGATTCTTGGTATTTG+GGG 0.531341 2.4:+252470 MS.gene067495:CDS
TCCTGTATTTATTCCTCCAG+AGG 0.540010 2.4:+255924 MS.gene067495:CDS
TCAAAGGAACTTTAGCATTG+AGG 0.541401 2.4:-252454 None:intergenic
GAACTTGAATCTGAAAATGC+TGG 0.543802 2.4:+252575 MS.gene067495:CDS
AAAGACATCGTCAATGATGC+CGG 0.544929 2.4:-252276 None:intergenic
GAACTTATCTTTCGTGCCAT+GGG 0.546538 2.4:+252524 MS.gene067495:CDS
ATGATCAATGACATTGATGC+TGG 0.550132 2.4:+252970 MS.gene067495:CDS
ATCGCCGTTGGTCAACGTGC+CGG 0.551366 2.4:+252257 MS.gene067495:CDS
AATGGAAACTAAACTTTCGA+AGG 0.571792 2.4:+257275 MS.gene067495:CDS
TATGCTCCATTGATACGTGA+TGG 0.578504 2.4:+253352 MS.gene067495:CDS
AATCCTACAAGAGTTAGTAT+TGG 0.579350 2.4:+253256 MS.gene067495:CDS
ACGATAATCAAAGACAATGT+CGG 0.579999 2.4:-252324 None:intergenic
CCCCAAATACCAAGAATCAA+AGG 0.580897 2.4:-252470 None:intergenic
GGATGACTATTTACCTCTGG+AGG 0.584674 2.4:-255937 None:intergenic
ATTGATACGTGATGGAAGGA+TGG 0.589829 2.4:+253360 MS.gene067495:CDS
TGGGAAACTAAGGATTCTGA+AGG 0.591317 2.4:+252188 MS.gene067495:CDS
GATGCCGGCACGTTGACCAA+CGG 0.601114 2.4:-252261 None:intergenic
AGAGACTATCTCTACAGACT+TGG 0.603878 2.4:+252212 MS.gene067495:CDS
TAGTGGGTTGATGATATTGG+AGG 0.612663 2.4:+255850 MS.gene067495:intron
ATTTGGGGTGGTAAAGGCCA+AGG 0.615673 2.4:+252485 MS.gene067495:CDS
CTCCATTGATACGTGATGGA+AGG 0.616615 2.4:+253356 MS.gene067495:CDS
TTAGAATGGGAAGAAGTTGG+CGG 0.625930 2.4:-252056 None:intergenic
AATAACAGGTTCAACTCCCA+TGG 0.625979 2.4:-252540 None:intergenic
TGAGAAAGATGGCATATCCA+GGG 0.627342 2.4:+253732 MS.gene067495:CDS
GATAACATGAACATCGCCGT+TGG 0.627507 2.4:+252245 MS.gene067495:CDS
ACCTGTTATTATGTCTGCTG+GGG 0.629895 2.4:+252553 MS.gene067495:CDS
GAGAATTGCTGCGAATGCGA+TGG 0.637150 2.4:-252098 None:intergenic
ATTCTGGACGACTCTAGAAG+CGG 0.664921 2.4:-252633 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTCATCAATATTAATT+TGG - chr2.4:256033-256052 None:intergenic 10.0%
!! ATGGATAAAAAAAAAAAAAA+AGG - chr2.4:255773-255792 None:intergenic 10.0%
!! TAAAATAAAATCAAAACTAT+GGG - chr2.4:254090-254109 None:intergenic 10.0%
!! TAAATAAATATTAAAATGCA+AGG - chr2.4:255460-255479 None:intergenic 10.0%
!! TGGATAAAAAAAAAAAAAAA+GGG - chr2.4:255772-255791 None:intergenic 10.0%
!! TTAAAATAAAATCAAAACTA+TGG - chr2.4:254091-254110 None:intergenic 10.0%
!! TTATTTATTTATAATAACCA+GGG + chr2.4:255473-255492 MS.gene067495:intron 10.0%
!! TTTATTTATTTATAATAACC+AGG + chr2.4:255472-255491 MS.gene067495:intron 10.0%
!!! AAAATTAGTATTTTTACATA+TGG - chr2.4:254535-254554 None:intergenic 10.0%
!!! ATTTGATTGTATTTTAAAAA+AGG + chr2.4:256179-256198 MS.gene067495:intron 10.0%
!! AAATATAGCCAAAATTATTA+GGG + chr2.4:256113-256132 MS.gene067495:intron 15.0%
!! AGATATATTAATGTAAACTA+AGG - chr2.4:254487-254506 None:intergenic 15.0%
!! ATAAATAAGATTGAAATCTA+AGG + chr2.4:256455-256474 MS.gene067495:intron 15.0%
!! TAAATAAGATTGAAATCTAA+GGG + chr2.4:256456-256475 MS.gene067495:intron 15.0%
!! TAAATATAGCCAAAATTATT+AGG + chr2.4:256112-256131 MS.gene067495:intron 15.0%
!! TAATAAGCATAGAATAAAAT+AGG - chr2.4:253946-253965 None:intergenic 15.0%
!! TATTTATTTATAATAACCAG+GGG + chr2.4:255474-255493 MS.gene067495:intron 15.0%
!!! AAATTTGAAGCATAATAAAT+TGG + chr2.4:255319-255338 MS.gene067495:intron 15.0%
!!! ATCATAATGTTTAATTTGTT+TGG - chr2.4:252729-252748 None:intergenic 15.0%
!!! TAATCATTTTTTTTTTCTCT+CGG - chr2.4:253031-253050 None:intergenic 15.0%
!!! TCATTTTCTTTTTTTATTCT+AGG + chr2.4:253404-253423 MS.gene067495:intron 15.0%
!! AATTTCATTACAAGTTACAA+TGG - chr2.4:255290-255309 None:intergenic 20.0%
!! ATAAATAAGACTGAAATCTA+AGG - chr2.4:256270-256289 None:intergenic 20.0%
!! ATATAATGGCAGAAATATAA+TGG - chr2.4:255572-255591 None:intergenic 20.0%
!! ATTTCATTACAAGTTACAAT+GGG - chr2.4:255289-255308 None:intergenic 20.0%
!! CCATAATTAAAATACATGAA+TGG - chr2.4:253441-253460 None:intergenic 20.0%
!! TAAATAAGACTGAAATCTAA+GGG - chr2.4:256269-256288 None:intergenic 20.0%
!! TATTGAAACTCAAAATTTGA+AGG + chr2.4:256786-256805 MS.gene067495:intron 20.0%
!! TGTATAAGTAATCATGAATT+TGG - chr2.4:252692-252711 None:intergenic 20.0%
!! TTATTGATATTATCATGCAA+AGG + chr2.4:256643-256662 MS.gene067495:intron 20.0%
!! TTCTATAACATACTAGAATA+AGG - chr2.4:254973-254992 None:intergenic 20.0%
!!! AAATTAACTGCTTTTCTATT+TGG + chr2.4:257185-257204 MS.gene067495:intron 20.0%
!!! AAATTAGTTGCAAATGTTTT+GGG + chr2.4:257028-257047 MS.gene067495:intron 20.0%
!!! ACATTTACGAAAACATTTTA+GGG - chr2.4:253660-253679 None:intergenic 20.0%
!!! ACTTTTCCTGTTTTAATATA+GGG + chr2.4:253173-253192 MS.gene067495:intron 20.0%
!!! AGTATTTTTACATATGGAAA+TGG - chr2.4:254529-254548 None:intergenic 20.0%
!!! ATATGACAGATCTATTTTAA+AGG + chr2.4:254451-254470 MS.gene067495:CDS 20.0%
!!! ATTGTTGGATAAAATGTTTT+AGG + chr2.4:253478-253497 MS.gene067495:intron 20.0%
!!! CCATTCATGTATTTTAATTA+TGG + chr2.4:253438-253457 MS.gene067495:intron 20.0%
!!! TACTTTTCCTGTTTTAATAT+AGG + chr2.4:253172-253191 MS.gene067495:intron 20.0%
!!! TATGTTTGGTGAAATATTAA+TGG + chr2.4:254572-254591 MS.gene067495:intron 20.0%
!!! TTATTGGCTAACATTAATTT+CGG + chr2.4:256589-256608 MS.gene067495:intron 20.0%
!!! TTATTGGCTAACATTAATTT+CGG - chr2.4:256608-256589 None:intergenic 20.0%
! AAAATGCTAGATATCAAGAA+TGG + chr2.4:256202-256221 MS.gene067495:intron 25.0%
! AACAAGAAACAAATTGTTTC+TGG - chr2.4:254148-254167 None:intergenic 25.0%
! AGACAATACCAAAAGAAAAA+AGG + chr2.4:254612-254631 MS.gene067495:intron 25.0%
! AGTATTCCCTATATTAAAAC+AGG - chr2.4:253182-253201 None:intergenic 25.0%
! ATAACGATAAAAACATCACA+AGG - chr2.4:256853-256872 None:intergenic 25.0%
! ATCACAAGGTAAAATATCAT+GGG - chr2.4:256839-256858 None:intergenic 25.0%
! CAAATTTCTCAAAAGAAGAA+AGG + chr2.4:255891-255910 MS.gene067495:CDS 25.0%
! GAATGAGAATGAATTAGAAT+GGG - chr2.4:252072-252091 None:intergenic 25.0%
! GAATTTGGACATACTTAAAA+GGG - chr2.4:252677-252696 None:intergenic 25.0%
! GACAATACCAAAAGAAAAAA+GGG + chr2.4:254613-254632 MS.gene067495:intron 25.0%
! TATAGTCTAATGAACGAAAA+GGG - chr2.4:253077-253096 None:intergenic 25.0%
! TCTACATTTGCTTATATTGA+TGG + chr2.4:252810-252829 MS.gene067495:intron 25.0%
! TGAATGAGAATGAATTAGAA+TGG - chr2.4:252073-252092 None:intergenic 25.0%
! TGAATTTGGACATACTTAAA+AGG - chr2.4:252678-252697 None:intergenic 25.0%
! TGATTTCATGAAATGAAACT+AGG + chr2.4:253617-253636 MS.gene067495:intron 25.0%
! TTATGTAGTTTAAATGCTGT+TGG + chr2.4:254792-254811 MS.gene067495:intron 25.0%
! TTGTGCGGAAAAATTAAATA+TGG - chr2.4:255792-255811 None:intergenic 25.0%
! TTTAGCAAATTAAGGAAATG+CGG - chr2.4:252900-252919 None:intergenic 25.0%
!! AATGTTACTCTTTAAAGACA+AGG - chr2.4:257124-257143 None:intergenic 25.0%
!! AATTAGTTGCAAATGTTTTG+GGG + chr2.4:257029-257048 MS.gene067495:intron 25.0%
!! ATATTTCTGCCATTATATTG+AGG + chr2.4:255574-255593 MS.gene067495:intron 25.0%
!! CACATTTACGAAAACATTTT+AGG - chr2.4:253661-253680 None:intergenic 25.0%
!! CTAAAATGTTTTCGTAAATG+TGG + chr2.4:253659-253678 MS.gene067495:intron 25.0%
!! GAAATTAGTTGCAAATGTTT+TGG + chr2.4:257027-257046 MS.gene067495:intron 25.0%
!! TAATTATGGTAGTTTTTGTC+AGG + chr2.4:253452-253471 MS.gene067495:intron 25.0%
!! TATTGGCTAACATTAATTTC+GGG - chr2.4:256609-256590 None:intergenic 25.0%
!! TATTTCTGCCATTATATTGA+GGG + chr2.4:255575-255594 MS.gene067495:intron 25.0%
!! TCAACAATCAAATTGTTGTT+GGG + chr2.4:253212-253231 MS.gene067495:CDS 25.0%
!! TCAATATTAATTTGGTTGAC+AGG - chr2.4:256025-256044 None:intergenic 25.0%
!! TGAATTTTTGCATAGTATTG+TGG + chr2.4:253501-253520 MS.gene067495:intron 25.0%
!! TTTTGTTCCCTTTTTTCTTT+TGG - chr2.4:254623-254642 None:intergenic 25.0%
!! TTTTTCTTTTGGTATTGTCT+TGG - chr2.4:254612-254631 None:intergenic 25.0%
!!! CTTTCTTCTTTTGAGAAATT+TGG - chr2.4:255893-255912 None:intergenic 25.0%
!!! GTTTAATTTGTTTGGATGAA+TGG - chr2.4:252721-252740 None:intergenic 25.0%
AAAAAAAAAAAAGGGCAACC+CGG - chr2.4:255764-255783 None:intergenic 30.0%
AAAAAGTCGTAACTTGATTC+TGG - chr2.4:252652-252671 None:intergenic 30.0%
AATCCTACAAGAGTTAGTAT+TGG + chr2.4:253256-253275 MS.gene067495:CDS 30.0%
AATGGAAACTAAACTTTCGA+AGG + chr2.4:257275-257294 MS.gene067495:CDS 30.0%
ACAACTTTGTCCATAAAAAG+AGG - chr2.4:252401-252420 None:intergenic 30.0%
ACATTTGCTTTCTTGATACA+GGG + chr2.4:252931-252950 MS.gene067495:intron 30.0%
ACGATAATCAAAGACAATGT+CGG - chr2.4:252327-252346 None:intergenic 30.0%
AGAATGAGAGTGATAAAAGA+AGG - chr2.4:253996-254015 None:intergenic 30.0%
AGAATTCCAATCATTGTAAC+AGG + chr2.4:253310-253329 MS.gene067495:CDS 30.0%
AGATCATTTCAATACCTTCA+AGG + chr2.4:252359-252378 MS.gene067495:CDS 30.0%
AGCCTCTTGTGTAAAAAATA+GGG + chr2.4:255667-255686 MS.gene067495:intron 30.0%
ATAGTCTAATGAACGAAAAG+GGG - chr2.4:253076-253095 None:intergenic 30.0%
ATATAAACTGTTCTAGCACA+AGG - chr2.4:255211-255230 None:intergenic 30.0%
ATGAAATTTCATGATCGATG+TGG + chr2.4:253525-253544 MS.gene067495:intron 30.0%
ATTGTTGAGAAAAAGGATCT+AGG + chr2.4:254915-254934 MS.gene067495:intron 30.0%
ATTTCTGCCATTATATTGAG+GGG + chr2.4:255576-255595 MS.gene067495:intron 30.0%
CAAAGAATGTATGAGAAAGA+TGG + chr2.4:253721-253740 MS.gene067495:CDS 30.0%
CAAATTTGTACTGAGATATC+AGG + chr2.4:254047-254066 MS.gene067495:intron 30.0%
CAATATTCAGTATATCTTCC+TGG - chr2.4:253699-253718 None:intergenic 30.0%
CAATGTAATAATCTCCTTGA+AGG - chr2.4:252376-252395 None:intergenic 30.0%
CAGACTACTTTAGCAAATTA+AGG - chr2.4:252908-252927 None:intergenic 30.0%
CATCACAAGGTAAAATATCA+TGG - chr2.4:256840-256859 None:intergenic 30.0%
CTACATAATAAGTAACTGAC+AGG - chr2.4:254780-254799 None:intergenic 30.0%
CTATAGTCTAATGAACGAAA+AGG - chr2.4:253078-253097 None:intergenic 30.0%
CTGATATCTCAGTACAAATT+TGG - chr2.4:254049-254068 None:intergenic 30.0%
CTGTTAAAACAGTAGTAAGA+AGG + chr2.4:253846-253865 MS.gene067495:intron 30.0%
CTTGTGTAAAAAATAGGGTA+AGG + chr2.4:255672-255691 MS.gene067495:intron 30.0%
GAATAAATACAGGAAGATTC+TGG - chr2.4:255918-255937 None:intergenic 30.0%
GAATGAGAGTGATAAAAGAA+GGG - chr2.4:253995-254014 None:intergenic 30.0%
GTCAACAATCAAATTGTTGT+TGG + chr2.4:253211-253230 MS.gene067495:CDS 30.0%
TACATTTGCTTTCTTGATAC+AGG + chr2.4:252930-252949 MS.gene067495:intron 30.0%
TACGAATAAGTACCTTGATT+AGG - chr2.4:253787-253806 None:intergenic 30.0%
TCATTTCCTGTTACAATGAT+TGG - chr2.4:253319-253338 None:intergenic 30.0%
TCCTTTGATTCTTGGTATTT+GGG + chr2.4:252469-252488 MS.gene067495:CDS 30.0%
TGAAGTGATTGTTGAGAAAA+AGG + chr2.4:254908-254927 MS.gene067495:intron 30.0%
TTCATCTTCTATCTATCCAA+TGG - chr2.4:256686-256705 None:intergenic 30.0%
TTCCTTTGATTCTTGGTATT+TGG + chr2.4:252468-252487 MS.gene067495:CDS 30.0%
TTGTTGAGAAAAAGGATCTA+GGG + chr2.4:254916-254935 MS.gene067495:intron 30.0%
! AGGAAAAGTATGTTCAGTAA+GGG - chr2.4:253162-253181 None:intergenic 30.0%
! CAGTTTGAAAAGTTTTACCT+TGG - chr2.4:252505-252524 None:intergenic 30.0%
! CTACGTTTGTAATTTTCCAT+TGG + chr2.4:256667-256686 MS.gene067495:intron 30.0%
! CTTTAAAGACAAGGAAAAGA+AGG - chr2.4:257115-257134 None:intergenic 30.0%
! GTGAAAACTTTTCCTAATCA+AGG + chr2.4:253772-253791 MS.gene067495:CDS 30.0%
! TGTGATATTAGAGCCTTTTA+TGG - chr2.4:255361-255380 None:intergenic 30.0%
! TTACATTGCTCCTCTTTTTA+TGG + chr2.4:252388-252407 MS.gene067495:CDS 30.0%
!! ACATTTGACATTTTGATCCA+TGG + chr2.4:255155-255174 MS.gene067495:intron 30.0%
!! ATTAGTTGCAAATGTTTTGG+GGG + chr2.4:257030-257049 MS.gene067495:intron 30.0%
!! CAAAGAACAACAGTTGATAA+TGG + chr2.4:257257-257276 MS.gene067495:CDS 30.0%
!! CACTCAAAAGCATTACAAAA+GGG - chr2.4:254858-254877 None:intergenic 30.0%
!! TAACTGCTTTTCTATTTGGT+TGG + chr2.4:257189-257208 MS.gene067495:intron 30.0%
!! TCAAGAATGGATTTTCTTGA+TGG + chr2.4:256215-256234 MS.gene067495:intron 30.0%
!! TCACTCAAAAGCATTACAAA+AGG - chr2.4:254859-254878 None:intergenic 30.0%
!! TGATCCATGGTTTTTCAAAA+GGG + chr2.4:255168-255187 MS.gene067495:intron 30.0%
!! TTACAGTTGCTGTTTATGTT+TGG + chr2.4:254558-254577 MS.gene067495:intron 30.0%
!! TTGATCCATGGTTTTTCAAA+AGG + chr2.4:255167-255186 MS.gene067495:intron 30.0%
!!! ACACACTCTTATTTTGATAC+CGG + chr2.4:254391-254410 MS.gene067495:intron 30.0%
!!! TACCCTATTTTTTACACAAG+AGG - chr2.4:255672-255691 None:intergenic 30.0%
AAAAGAATTGGCATGAGAGT+CGG - chr2.4:256918-256937 None:intergenic 35.0%
AAAGGATGACTATTTACCTC+TGG - chr2.4:255943-255962 None:intergenic 35.0%
AACCTGTTATTATGTCTGCT+GGG + chr2.4:252552-252571 MS.gene067495:CDS 35.0%
AAGGTTACCCCTCAATATAA+TGG - chr2.4:255586-255605 None:intergenic 35.0%
AATGACATACAAACTTGTGG+TGG + chr2.4:255823-255842 MS.gene067495:intron 35.0%
ACAAGGTAAAATATCATGGG+TGG - chr2.4:256836-256855 None:intergenic 35.0%
AGCAACTTGAACTAGTTCAT+TGG - chr2.4:255081-255100 None:intergenic 35.0%
AGCCAAAATTATTAGGGTCA+TGG + chr2.4:256119-256138 MS.gene067495:intron 35.0%
AGTTATCAGAGCAATCTTCT+TGG + chr2.4:252168-252187 MS.gene067495:CDS 35.0%
ATGATCAATGACATTGATGC+TGG + chr2.4:252970-252989 MS.gene067495:CDS 35.0%
ATGTTGCATACATTACTGCT+GGG - chr2.4:255509-255528 None:intergenic 35.0%
ATTATATTGAGGGGTAACCT+TGG + chr2.4:255585-255604 MS.gene067495:intron 35.0%
CAGCCTCTTGTGTAAAAAAT+AGG + chr2.4:255666-255685 MS.gene067495:intron 35.0%
CATTAGCAATGTGATAGATG+AGG - chr2.4:253579-253598 None:intergenic 35.0%
CCTTCTGGGCAAAAATAAAA+TGG - chr2.4:254883-254902 None:intergenic 35.0%
CCTTTGATTCTTGGTATTTG+GGG + chr2.4:252470-252489 MS.gene067495:CDS 35.0%
GAACTTGAATCTGAAAATGC+TGG + chr2.4:252575-252594 MS.gene067495:CDS 35.0%
GAATTAGAATGGGAAGAAGT+TGG - chr2.4:252062-252081 None:intergenic 35.0%
GCTAAAGTTCCTTTGATTCT+TGG + chr2.4:252461-252480 MS.gene067495:CDS 35.0%
GCTAATGACATACAAACTTG+TGG + chr2.4:255820-255839 MS.gene067495:intron 35.0%
GTTATCAGAGCAATCTTCTT+GGG + chr2.4:252169-252188 MS.gene067495:CDS 35.0%
TAAAGTTGTTGTCATGTGAC+TGG + chr2.4:255617-255636 MS.gene067495:intron 35.0%
TACTTATTCGTATGCCATGT+TGG + chr2.4:253795-253814 MS.gene067495:intron 35.0%
TAGTCTAATGAACGAAAAGG+GGG - chr2.4:253075-253094 None:intergenic 35.0%
TATCAGGTCTGTTCTCATTT+AGG + chr2.4:254063-254082 MS.gene067495:intron 35.0%
TATGTTGCATACATTACTGC+TGG - chr2.4:255510-255529 None:intergenic 35.0%
TCAAAGGAACTTTAGCATTG+AGG - chr2.4:252457-252476 None:intergenic 35.0%
TCTCGACAATTGACCATAAA+AGG + chr2.4:255345-255364 MS.gene067495:intron 35.0%
TGACCAATACTAACTCTTGT+AGG - chr2.4:253262-253281 None:intergenic 35.0%
TGGTAAGCTAACATCTGATT+AGG + chr2.4:253005-253024 MS.gene067495:intron 35.0%
TTAAGGAAATGCGGAATCAT+TGG - chr2.4:252891-252910 None:intergenic 35.0%
TTCAGTATATCTTCCTGGTT+AGG - chr2.4:253694-253713 None:intergenic 35.0%
TTTGTGCATACAACATAGCT+AGG - chr2.4:252775-252794 None:intergenic 35.0%
! AGAACTTTTCTGAACCAACA+TGG - chr2.4:253812-253831 None:intergenic 35.0%
! ATTGCTCTAGACTCAGTATA+AGG - chr2.4:252855-252874 None:intergenic 35.0%
! CAGGAAAAGTATGTTCAGTA+AGG - chr2.4:253163-253182 None:intergenic 35.0%
! CTTGCATTTATACAGGTTGA+GGG - chr2.4:254948-254967 None:intergenic 35.0%
! GAAGGATGGATAAGTTTTAC+TGG + chr2.4:253374-253393 MS.gene067495:CDS 35.0%
! GACCATGACCCTAATAATTT+TGG - chr2.4:256124-256143 None:intergenic 35.0%
! GAGATGAGAAAGGTAGTTTT+TGG - chr2.4:252435-252454 None:intergenic 35.0%
! TAAGGTGCTTGCATTTATAC+AGG - chr2.4:254955-254974 None:intergenic 35.0%
! TCTAGCACAAGGAATCTTTT+CGG - chr2.4:255200-255219 None:intergenic 35.0%
! TTGCTCTAGACTCAGTATAA+GGG - chr2.4:252854-252873 None:intergenic 35.0%
!! ACAGGAGATTCTTTTGAAAG+AGG - chr2.4:254762-254781 None:intergenic 35.0%
!! ATAAAAGAAGGGCACTCTAA+AGG - chr2.4:253984-254003 None:intergenic 35.0%
!! GAGTTAGTATTGGTCAAGAT+TGG + chr2.4:253266-253285 MS.gene067495:CDS 35.0%
!! GTTACCCTTTTGAAAAACCA+TGG - chr2.4:255175-255194 None:intergenic 35.0%
!! TCTTAGTGGGTTGATGATAT+TGG + chr2.4:255847-255866 MS.gene067495:intron 35.0%
!! TGATGGATTCAAGAATGACA+TGG + chr2.4:256232-256251 MS.gene067495:intron 35.0%
!!! AACTTTTTCAACTTCATCCC+TGG - chr2.4:253752-253771 None:intergenic 35.0%
!!! AAGCCTTTTCTAGAATGAGA+AGG - chr2.4:255246-255265 None:intergenic 35.0%
!!! CCATTTTATTTTTGCCCAGA+AGG + chr2.4:254880-254899 MS.gene067495:intron 35.0%
AAAGACATCGTCAATGATGC+CGG - chr2.4:252279-252298 None:intergenic 40.0%
AATAACAGGTTCAACTCCCA+TGG - chr2.4:252543-252562 None:intergenic 40.0%
AATGAACGAAAAGGGGGATA+TGG - chr2.4:253069-253088 None:intergenic 40.0%
AATTTACACATTCAGCCTCC+TGG - chr2.4:255430-255449 None:intergenic 40.0%
ACCTGTTATTATGTCTGCTG+GGG + chr2.4:252553-252572 MS.gene067495:CDS 40.0%
AGAGACTATCTCTACAGACT+TGG + chr2.4:252212-252231 MS.gene067495:CDS 40.0%
ATCATTGACGATGTCTTTGC+CGG + chr2.4:252281-252300 MS.gene067495:CDS 40.0%
ATCCTTCCATCACGTATCAA+TGG - chr2.4:253361-253380 None:intergenic 40.0%
ATCGATGCTTTACTTGAGTC+AGG + chr2.4:257222-257241 MS.gene067495:CDS 40.0%
ATCGCCTGAGATACTTTGTA+GGG + chr2.4:254717-254736 MS.gene067495:intron 40.0%
ATCGTTATCTCTCTTGCACT+TGG + chr2.4:256865-256884 MS.gene067495:intron 40.0%
ATGAGAAAGATGGCATATCC+AGG + chr2.4:253731-253750 MS.gene067495:CDS 40.0%
ATGTGTCTAACATAGCAGAC+AGG - chr2.4:256961-256980 None:intergenic 40.0%
ATGTTGGCCAGCAAAAGAAT+TGG - chr2.4:256930-256949 None:intergenic 40.0%
CAGAACAGAACAGGAGAAAA+AGG - chr2.4:255961-255980 None:intergenic 40.0%
CAGTACAAATTTGGCAAACG+AGG - chr2.4:254040-254059 None:intergenic 40.0%
CATTAGCAGCAATCTTTGTG+CGG - chr2.4:255807-255826 None:intergenic 40.0%
CCCCAAATACCAAGAATCAA+AGG - chr2.4:252473-252492 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG + chr2.4:255698-255717 MS.gene067495:intron 40.0%
CTAGAATGAGAAGGCTGTAT+TGG - chr2.4:255237-255256 None:intergenic 40.0%
CTCCTAGTGTTTCAGTTACT+TGG + chr2.4:253125-253144 MS.gene067495:intron 40.0%
GAACCTGTTATTATGTCTGC+TGG + chr2.4:252551-252570 MS.gene067495:CDS 40.0%
GAACTTATCTTTCGTGCCAT+GGG + chr2.4:252524-252543 MS.gene067495:CDS 40.0%
GACCAAGTAACTGAAACACT+AGG - chr2.4:253130-253149 None:intergenic 40.0%
GAGATACTTTGTAGGGTGTA+GGG + chr2.4:254724-254743 MS.gene067495:intron 40.0%
GCAATCTTCTTGGGAAACTA+AGG + chr2.4:252178-252197 MS.gene067495:CDS 40.0%
GCTTGCATTTATACAGGTTG+AGG - chr2.4:254949-254968 None:intergenic 40.0%
GTAGGCTAACTGATGGTAAT+TGG + chr2.4:255993-256012 MS.gene067495:intron 40.0%
GTGCATACTGGATAGTTGAT+AGG - chr2.4:255036-255055 None:intergenic 40.0%
TAGCCAATAAAATCTCAGCC+TGG - chr2.4:256579-256598 None:intergenic 40.0%
TATGCTCCATTGATACGTGA+TGG + chr2.4:253352-253371 MS.gene067495:CDS 40.0%
TCCAGTATGCACAAAGAAGT+TGG + chr2.4:255044-255063 MS.gene067495:intron 40.0%
TCCTGTATTTATTCCTCCAG+AGG + chr2.4:255924-255943 MS.gene067495:CDS 40.0%
TGAACTTATCTTTCGTGCCA+TGG + chr2.4:252523-252542 MS.gene067495:CDS 40.0%
TGAGAAAGATGGCATATCCA+GGG + chr2.4:253732-253751 MS.gene067495:CDS 40.0%
TGAGATACTTTGTAGGGTGT+AGG + chr2.4:254723-254742 MS.gene067495:intron 40.0%
TGGGAAACTAAGGATTCTGA+AGG + chr2.4:252188-252207 MS.gene067495:CDS 40.0%
TGTTTCAGTTACTTGGTCAG+CGG + chr2.4:253132-253151 MS.gene067495:intron 40.0%
TTAGAATGGGAAGAAGTTGG+CGG - chr2.4:252059-252078 None:intergenic 40.0%
TTGATTCTTGGTATTTGGGG+TGG + chr2.4:252473-252492 MS.gene067495:CDS 40.0%
! AATGACATTGATGCTGGTCT+TGG + chr2.4:252976-252995 MS.gene067495:CDS 40.0%
! ACCTCTGGAGGAATAAATAC+AGG - chr2.4:255928-255947 None:intergenic 40.0%
! ATTGATACGTGATGGAAGGA+TGG + chr2.4:253360-253379 MS.gene067495:CDS 40.0%
! CAGCCTTCTCATTCTAGAAA+AGG + chr2.4:255240-255259 MS.gene067495:intron 40.0%
! GTTTTTGTCAGGTGCATTGT+TGG + chr2.4:253463-253482 MS.gene067495:intron 40.0%
! TACACCCTACAAAGTATCTC+AGG - chr2.4:254724-254743 None:intergenic 40.0%
! TAGCATTGAGGAGATGAGAA+AGG - chr2.4:252445-252464 None:intergenic 40.0%
! TCTCATGCCAATTCTTTTGC+TGG + chr2.4:256920-256939 MS.gene067495:intron 40.0%
! TCTTTTGCTGGCCAACATTT+GGG + chr2.4:256932-256951 MS.gene067495:intron 40.0%
! TGCTCTAGACTCAGTATAAG+GGG - chr2.4:252853-252872 None:intergenic 40.0%
! TGTTTTCGTAAATGTGGCAC+AGG + chr2.4:253665-253684 MS.gene067495:intron 40.0%
! TTCTTTTGCTGGCCAACATT+TGG + chr2.4:256931-256950 MS.gene067495:intron 40.0%
!! AAACTTGTGGTGGATCTTAG+TGG + chr2.4:255833-255852 MS.gene067495:intron 40.0%
!! AACTTGTGGTGGATCTTAGT+GGG + chr2.4:255834-255853 MS.gene067495:intron 40.0%
!! CAAAAGCATTACAAAAGGGC+AGG - chr2.4:254854-254873 None:intergenic 40.0%
!! TAGTGGGTTGATGATATTGG+AGG + chr2.4:255850-255869 MS.gene067495:intron 40.0%
!!! TATTTTGATACCGGCAGCAT+TGG + chr2.4:254400-254419 MS.gene067495:intron 40.0%
AATCACTTCACAACGCCTTC+TGG - chr2.4:254898-254917 None:intergenic 45.0%
ACAACAGGACAGAACAGAAC+AGG - chr2.4:255970-255989 None:intergenic 45.0%
AGAAAGCCACCATCAAACAC+TGG - chr2.4:255123-255142 None:intergenic 45.0%
ATCACTTCACAACGCCTTCT+GGG - chr2.4:254897-254916 None:intergenic 45.0%
CAGACAGGATACCCAAATGT+TGG - chr2.4:256946-256965 None:intergenic 45.0%
CATCGCCTGAGATACTTTGT+AGG + chr2.4:254716-254735 MS.gene067495:intron 45.0%
CATTACAAAAGGGCAGGACT+AGG - chr2.4:254848-254867 None:intergenic 45.0%
CCATAAAAGTCCAATGCTGC+CGG - chr2.4:254413-254432 None:intergenic 45.0%
GAAAGCCACCATCAAACACT+GGG - chr2.4:255122-255141 None:intergenic 45.0%
GATAACATGAACATCGCCGT+TGG + chr2.4:252245-252264 MS.gene067495:CDS 45.0%
GCCAACTTCTTTGTGCATAC+TGG - chr2.4:255048-255067 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG + chr2.4:255697-255716 MS.gene067495:intron 45.0%
GCTGCGTACAATACACCAAA+TGG + chr2.4:255694-255713 MS.gene067495:intron 45.0%
GGATGACTATTTACCTCTGG+AGG - chr2.4:255940-255959 None:intergenic 45.0%
GTATGCACAAAGAAGTTGGC+AGG + chr2.4:255048-255067 MS.gene067495:intron 45.0%
GTGCATACAACATAGCTAGG+TGG - chr2.4:252772-252791 None:intergenic 45.0%
GTTGTTGTCATGTGACTGGA+AGG + chr2.4:255621-255640 MS.gene067495:intron 45.0%
TAGCCAATAAAATCCCAGCC+TGG + chr2.4:256381-256400 MS.gene067495:intron 45.0%
TCAGCCTGGCTGAAAATCAT+GGG - chr2.4:256565-256584 None:intergenic 45.0%
TCCCCAGCAGACATAATAAC+AGG - chr2.4:252557-252576 None:intergenic 45.0%
TTCTGTTCTGTCCTGTTGTG+TGG + chr2.4:255971-255990 MS.gene067495:intron 45.0%
TTGTGTGGTAGGCTAACTGA+TGG + chr2.4:255986-256005 MS.gene067495:intron 45.0%
! AACAACCAAGTCTTATCCCC+AGG - chr2.4:254272-254291 None:intergenic 45.0%
! ACTCAGTATAAGGGGAGCAT+TGG - chr2.4:252845-252864 None:intergenic 45.0%
! ATTCTGGACGACTCTAGAAG+CGG - chr2.4:252636-252655 None:intergenic 45.0%
! CAGCCAGGCTGAGATTTTAT+TGG + chr2.4:256573-256592 MS.gene067495:intron 45.0%
! CTACAAAGTATCTCAGGCGA+TGG - chr2.4:254718-254737 None:intergenic 45.0%
! CTCCATTGATACGTGATGGA+AGG + chr2.4:253356-253375 MS.gene067495:CDS 45.0%
! CTTGGTATTTGGGGTGGTAA+AGG + chr2.4:252479-252498 MS.gene067495:CDS 45.0%
! GTCTTTGCCGGCAATTTTCT+CGG + chr2.4:252293-252312 MS.gene067495:CDS 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr2.4:255661-255680 None:intergenic 45.0%
!!! AGTTGCAAATGTTTTGGGGG+AGG + chr2.4:257033-257052 MS.gene067495:intron 45.0%
!!! CTTATTTTGCGTCGCTTCTG+AGG - chr2.4:254221-254240 None:intergenic 45.0%
ACTAAAGCTCCCGCATATGC+AGG - chr2.4:255738-255757 None:intergenic 50.0%
AGAGAGAACCCTGAATGCAG+TGG + chr2.4:255399-255418 MS.gene067495:intron 50.0%
ATCAAACACTGGGCAGCATC+GGG - chr2.4:255112-255131 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr2.4:255605-255624 None:intergenic 50.0%
CAATAAAATCCCAGCCTGGC+CGG + chr2.4:256385-256404 MS.gene067495:intron 50.0%
CAGCCTGGCTGAAAATCATG+GGG - chr2.4:256564-256583 None:intergenic 50.0%
CATCAAACACTGGGCAGCAT+CGG - chr2.4:255113-255132 None:intergenic 50.0%
CGCTCACGAATCAATCTTCC+AGG - chr2.4:252605-252624 None:intergenic 50.0%
CTAAAGCTCCCGCATATGCA+GGG - chr2.4:255737-255756 None:intergenic 50.0%
CTCAGCCTGGCTGAAAATCA+TGG - chr2.4:256566-256585 None:intergenic 50.0%
GAGAATTGCTGCGAATGCGA+TGG - chr2.4:252101-252120 None:intergenic 50.0%
GCTGAAAATCATGGGGTGGT+GGG - chr2.4:256557-256576 None:intergenic 50.0%
GTCATGTGACTGGAAGGTCA+CGG + chr2.4:255627-255646 MS.gene067495:intron 50.0%
GTCTCTGCCGAGAAAATTGC+CGG - chr2.4:252303-252322 None:intergenic 50.0%
GTTCTGTCCTGTTGTGTGGT+AGG + chr2.4:255975-255994 MS.gene067495:intron 50.0%
TACTTTGTAGGGTGTAGGGC+TGG + chr2.4:254728-254747 MS.gene067495:intron 50.0%
TCATGTGACTGGAAGGTCAC+GGG + chr2.4:255628-255647 MS.gene067495:intron 50.0%
TCTGAAAATGCTGGTGAGCC+TGG + chr2.4:252584-252603 MS.gene067495:CDS 50.0%
TGGATACGCCACTGCATTCA+GGG - chr2.4:255410-255429 None:intergenic 50.0%
! AACCAAGTCTTATCCCCAGG+TGG - chr2.4:254269-254288 None:intergenic 50.0%
! ACCAAGTCTTATCCCCAGGT+GGG - chr2.4:254268-254287 None:intergenic 50.0%
! ATTTGGGGTGGTAAAGGCCA+AGG + chr2.4:252485-252504 MS.gene067495:CDS 50.0%
! CAGTTAGCCTACCACACAAC+AGG - chr2.4:255985-256004 None:intergenic 50.0%
!! AAATCATGGGGTGGTGGGTA+CGG - chr2.4:256552-256571 None:intergenic 50.0%
!! CCGGCAGCATTGGACTTTTA+TGG + chr2.4:254410-254429 MS.gene067495:intron 50.0%
!! GATGCTGGTCTTGGTCGATT+TGG + chr2.4:252985-253004 MS.gene067495:CDS 50.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr2.4:255640-255659 MS.gene067495:intron 55.0%
AATGCAGTGGCGTATCCAGG+AGG + chr2.4:255412-255431 MS.gene067495:intron 55.0%
ACCCACCACCCCATGATTTC+CGG - chr2.4:256407-256426 None:intergenic 55.0%
CAAAAGGGCAGGACTAGGAG+TGG - chr2.4:254843-254862 None:intergenic 55.0%
CCTGGCTGAAAATCATGGGG+TGG - chr2.4:256561-256580 None:intergenic 55.0%
CGATGCTGCCCAGTGTTTGA+TGG + chr2.4:255111-255130 MS.gene067495:intron 55.0%
CTGAATGCAGTGGCGTATCC+AGG + chr2.4:255409-255428 MS.gene067495:intron 55.0%
CTGGATACGCCACTGCATTC+AGG - chr2.4:255411-255430 None:intergenic 55.0%
GGCTGAAAATCATGGGGTGG+TGG - chr2.4:256558-256577 None:intergenic 55.0%
TCAAACACTGGGCAGCATCG+GGG - chr2.4:255111-255130 None:intergenic 55.0%
TGCTGCCCAGTGTTTGATGG+TGG + chr2.4:255114-255133 MS.gene067495:intron 55.0%
TGCTGGGAAACACATTCCCC+TGG - chr2.4:255493-255512 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG + chr2.4:255742-255761 MS.gene067495:intron 55.0%
! CCAAGTCTTATCCCCAGGTG+GGG - chr2.4:254267-254286 None:intergenic 55.0%
! CCACCCCATGATTTTCAGCC+AGG + chr2.4:256558-256577 MS.gene067495:intron 55.0%
! CGGCCAGGCTGGGATTTTAT+TGG - chr2.4:256387-256406 None:intergenic 55.0%
AGGGGTAACCTTGGCGCAAC+TGG + chr2.4:255594-255613 MS.gene067495:intron 60.0%
ATCGCCGTTGGTCAACGTGC+CGG + chr2.4:252257-252276 MS.gene067495:CDS 60.0%
CAGCCTGGCCGGAAATCATG+GGG + chr2.4:256396-256415 MS.gene067495:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG - chr2.4:255725-255744 None:intergenic 60.0%
CCAGCCTGGCCGGAAATCAT+GGG + chr2.4:256395-256414 MS.gene067495:intron 60.0%
CCATGATTTCCGGCCAGGCT+GGG - chr2.4:256397-256416 None:intergenic 60.0%
CCCCACCTGGGGATAAGACT+TGG + chr2.4:254264-254283 MS.gene067495:intron 60.0%
CTTCCCGGACCCTGCATATG+CGG + chr2.4:255725-255744 MS.gene067495:intron 60.0%
GATGCCGGCACGTTGACCAA+CGG - chr2.4:252264-252283 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG - chr2.4:255726-255745 None:intergenic 60.0%
GCCGGAAATCATGGGGTGGT+GGG + chr2.4:256403-256422 MS.gene067495:intron 60.0%
GTCTTATCCCCAGGTGGGGT+CGG - chr2.4:254263-254282 None:intergenic 60.0%
TTCCCGGACCCTGCATATGC+GGG + chr2.4:255726-255745 MS.gene067495:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr2.4:255710-255729 MS.gene067495:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG + chr2.4:255743-255762 MS.gene067495:intron 60.0%
!! TGGGGTGGTGGGTACGGAAA+AGG - chr2.4:256546-256565 None:intergenic 60.0%
CATGTAGCCGACCCCACCTG+GGG + chr2.4:254253-254272 MS.gene067495:intron 65.0%
CCACCCCATGATTTCCGGCC+AGG - chr2.4:256402-256421 None:intergenic 65.0%
CCATGTAGCCGACCCCACCT+GGG + chr2.4:254252-254271 MS.gene067495:intron 65.0%
CCCAGCCTGGCCGGAAATCA+TGG + chr2.4:256394-256413 MS.gene067495:intron 65.0%
CCCATGATTTCCGGCCAGGC+TGG - chr2.4:256398-256417 None:intergenic 65.0%
CCTGGCCGGAAATCATGGGG+TGG + chr2.4:256399-256418 MS.gene067495:intron 65.0%
CGCATATGCAGGGTCCGGGA+AGG - chr2.4:255727-255746 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr2.4:255712-255731 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG - chr2.4:255731-255750 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG - chr2.4:255732-255751 None:intergenic 65.0%
GGCCGGAAATCATGGGGTGG+TGG + chr2.4:256402-256421 MS.gene067495:intron 65.0%
GTGGCACAGGCAGCCTAACC+AGG + chr2.4:253678-253697 MS.gene067495:intron 65.0%
TCCATGTAGCCGACCCCACC+TGG + chr2.4:254251-254270 MS.gene067495:intron 65.0%
CCCAGGTGGGGTCGGCTACA+TGG - chr2.4:254255-254274 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 252029 257323 252029 ID=MS.gene067495
chr2.4 mRNA 252029 257323 252029 ID=MS.gene067495.t1;Parent=MS.gene067495
chr2.4 exon 252029 252658 252029 ID=MS.gene067495.t1.exon1;Parent=MS.gene067495.t1
chr2.4 CDS 252029 252658 252029 ID=cds.MS.gene067495.t1;Parent=MS.gene067495.t1
chr2.4 exon 252952 253006 252952 ID=MS.gene067495.t1.exon2;Parent=MS.gene067495.t1
chr2.4 CDS 252952 253006 252952 ID=cds.MS.gene067495.t1;Parent=MS.gene067495.t1
chr2.4 exon 253194 253395 253194 ID=MS.gene067495.t1.exon3;Parent=MS.gene067495.t1
chr2.4 CDS 253194 253395 253194 ID=cds.MS.gene067495.t1;Parent=MS.gene067495.t1
chr2.4 exon 253687 253793 253687 ID=MS.gene067495.t1.exon4;Parent=MS.gene067495.t1
chr2.4 CDS 253687 253793 253687 ID=cds.MS.gene067495.t1;Parent=MS.gene067495.t1
chr2.4 exon 254417 254472 254417 ID=MS.gene067495.t1.exon5;Parent=MS.gene067495.t1
chr2.4 CDS 254417 254472 254417 ID=cds.MS.gene067495.t1;Parent=MS.gene067495.t1
chr2.4 exon 255853 255945 255853 ID=MS.gene067495.t1.exon6;Parent=MS.gene067495.t1
chr2.4 CDS 255853 255945 255853 ID=cds.MS.gene067495.t1;Parent=MS.gene067495.t1
chr2.4 exon 257216 257323 257216 ID=MS.gene067495.t1.exon7;Parent=MS.gene067495.t1
chr2.4 CDS 257216 257323 257216 ID=cds.MS.gene067495.t1;Parent=MS.gene067495.t1
Gene Sequence

>MS.gene067495

ATGGCGAAGCTGCTATTACTTCTACGACCGCCAACTTCTTCCCATTCTAATTCATTCTCATTCAAAAAACCATCGCATTCGCAGCAATTCTCATGTGTTCGCTGCTGTAGTAATAGTGATGATGAAAACAACAAGAAGAAGTTATCAGAGCAATCTTCTTGGGAAACTAAGGATTCTGAAGGAAGAGACTATCTCTACAGACTTGGCGCTGAAGCTGATAACATGAACATCGCCGTTGGTCAACGTGCCGGCATCATTGACGATGTCTTTGCCGGCAATTTTCTCGGCAGAGACTCCGACATTGTCTTTGATTATCGTCAGAAAGTCACTAGATCATTTCAATACCTTCAAGGAGATTATTACATTGCTCCTCTTTTTATGGACAAAGTTGTTACTCACATTACCAAAAACTACCTTTCTCATCTCCTCAATGCTAAAGTTCCTTTGATTCTTGGTATTTGGGGTGGTAAAGGCCAAGGTAAAACTTTTCAAACTGAACTTATCTTTCGTGCCATGGGAGTTGAACCTGTTATTATGTCTGCTGGGGAACTTGAATCTGAAAATGCTGGTGAGCCTGGAAGATTGATTCGTGAGCGCTACAGAACCGCTTCTAGAGTCGTCCAGAATCAAGTTACGACTTTTTTACCCTTTTAAGTATGTCCAAATTCATGATTACTTATACATTTTTTCCATTCATCCAAACAAATTAAACATTATGATTTATCTTGTTGATTTTACATCCACCTAGCTATGTTGTATGCACAAAATAATGCTAAAGTAGTCTACATTTGCTTATATTGATGGTTGATGTATCCAATGCTCCCCTTATACTGAGTCTAGAGCAATATTTATTAGTCGACCAATGATTCCGCATTTCCTTAATTTGCTAAAGTAGTCTGTCTACATTTGCTTTCTTGATACAGGGAAAGATGAGCTGTTTAATGATCAATGACATTGATGCTGGTCTTGGTCGATTTGGTAAGCTAACATCTGATTAGGCCGAGAGAAAAAAAAAATGATTATTTGTAAATTTTATTCCATATCCCCCTTTTCGTTCATTAGACTATAGTTTGTGTGTGCGCGCGTTGCATTGCGTCTCCTAGTGTTTCAGTTACTTGGTCAGCGGTCAACCCTTACTGAACATACTTTTCCTGTTTTAATATAGGGAATACTCAAATGACAGTCAACAATCAAATTGTTGTTGGGACTCTTATGAATCTATGTGACAATCCTACAAGAGTTAGTATTGGTCAAGATTGGCGAGAAGCAGATGTCACAAACAGAATTCCAATCATTGTAACAGGAAATGATCTTTCAACTATTTATGCTCCATTGATACGTGATGGAAGGATGGATAAGTTTTACTGGTAAATTATCATTTTCTTTTTTTATTCTAGGATTACTACTTGCCATTCATGTATTTTAATTATGGTAGTTTTTGTCAGGTGCATTGTTGGATAAAATGTTTTAGGTGAATTTTTGCATAGTATTGTGGAATGAAATTTCATGATCGATGTGGTTGATAAAGCTATGTTTAGCATGATTTACCTCATCTATCACATTGCTAATGCAATGACTCTGAAGTATCTGATTTCATGAAATGAAACTAGGTAAGCTATGTCACTCTTCCCTAAAATGTTTTCGTAAATGTGGCACAGGCAGCCTAACCAGGAAGATATACTGAATATTGTTCAAAGAATGTATGAGAAAGATGGCATATCCAGGGATGAAGTTGAAAAAGTTGTGAAAACTTTTCCTAATCAAGGTACTTATTCGTATGCCATGTTGGTTCAGAAAAGTTCTATTTATCTGTTATGCTGTTAAAACAGTAGTAAGAAGGTATATGTTATTATTCGATATAAATTAAGTAGTACGATAGAAAATCTTGCAGTTGTTTATTTATATATCATGCTGCCTATTTTATTCTATGCTTATTATTGTGACTGATATTTCCTTTAGAGTGCCCTTCTTTTATCACTCTCATTCTTTATCTTAACTAACTTATTTTCCTCGTTTGCCAAATTTGTACTGAGATATCAGGTCTGTTCTCATTTAGGACCCATAGTTTTGATTTTATTTTAATCTTGTTTAATCAATTAAATATTTTTTTTGTAAACCAGAAACAATTTGTTTCTTGTTTGTACAGAAAAAGCACTTTTCTTTTGAAGCAGTTTCAATTATTTGTTTTTCCTCAGAAGCGACGCAAAATAAGCAGAATTTGATCCATGTAGCCGACCCCACCTGGGGATAAGACTTGGTTGTTGTTGACTCAATAAGCAGAAATCTGTTTCTTTTTCATATTTTTTTTTTAAACTTTAAATAAACAATCTTAAAAGTTTGTAATATGAATTTCAAAACTTAAACACACTCTTATTTTGATACCGGCAGCATTGGACTTTTATGGAGCTCTAAGATCGCGTACATATGACAGATCTATTTTAAAGGTATGCAGATACCTTAGTTTACATTAATATATCTTACTGATCTAGCTGACTTTCCATTTCCATATGTAAAAATACTAATTTTCAATTACAGTTGCTGTTTATGTTTGGTGAAATATTAATGGTAGTTTTTGATGAACCAAGACAATACCAAAAGAAAAAAGGGAACAAAAGATGTTGTGACAATCTCTTATTATGTGACTCTTGAATGTCGCACATTTTACGCTATAGAAATTATTCATCATCCATCGCCTGAGATACTTTGTAGGGTGTAGGGCTGGAAGAAAAGCCTCTTTCAAAAGAATCTCCTGTCAGTTACTTATTATGTAGTTTAAATGCTGTTGGAATTACTCACACAGACAAATTAATACCACTCCTAGTCCTGCCCTTTTGTAATGCTTTTGAGTGAACCATTTTATTTTTGCCCAGAAGGCGTTGTGAAGTGATTGTTGAGAAAAAGGATCTAGGGTATGAACCCTCAACCTGTATAAATGCAAGCACCTTATTCTAGTATGTTATAGAAAAAATTTTTGATCTCTGTGCATATATGTAGTACTAAAGTACCTATCAACTATCCAGTATGCACAAAGAAGTTGGCAGGTTTAGTGCCAATGAACTAGTTCAAGTTGCTTAAATTACCCCGATGCTGCCCAGTGTTTGATGGTGGCTTTCTCTCTTCAAGTAGACATTTGACATTTTGATCCATGGTTTTTCAAAAGGGTAACAACCGAAAAGATTCCTTGTGCTAGAACAGTTTATATTATCCAATACAGCCTTCTCATTCTAGAAAAGGCTTGAAGCATGATAATGCATATGCCCATTGTAACTTGTAATGAAATTTAATTGTGAAAATTTGAAGCATAATAAATTGGCGTTCTCGACAATTGACCATAAAAGGCTCTAATATCACATAAATATAAATGATCTGAAGAGAGAACCCTGAATGCAGTGGCGTATCCAGGAGGCTGAATGTGTAAATTTCTATCACCTTGCATTTTAATATTTATTTATTTATAATAACCAGGGGAATGTGTTTCCCAGCAGTAATGTATGCAACATAACTAGCAGTAAGTTTTTCGACAATGACAGTTGACAACTGCCATTATATTTCTGCCATTATATTGAGGGGTAACCTTGGCGCAACTGGTAAAGTTGTTGTCATGTGACTGGAAGGTCACGGGTTCAAGTCCTGGAAACAGCCTCTTGTGTAAAAAATAGGGTAAGGCTGCGTACAATACACCAAATGGTGGGACCCCTTCCCGGACCCTGCATATGCGGGAGCTTTAGTGCACCGGGTTGCCCTTTTTTTTTTTTTTTATCCATATTTAATTTTTCCGCACAAAGATTGCTGCTAATGACATACAAACTTGTGGTGGATCTTAGTGGGTTGATGATATTGGAGGTGCTGAAAGTTTTGCATCCAAATTTCTCAAAAGAAGAAAGGACCAGAATCTTCCTGTATTTATTCCTCCAGAGGTAAATAGTCATCCTTTTTCTCCTGTTCTGTTCTGTCCTGTTGTGTGGTAGGCTAACTGATGGTAATTGGCTGTTTCCTGTCAACCAAATTAATATTGATGAAATATTGATTCAGCTCATATATAAGTTGAACATAGTTTATAGACGAACATAAAATTATAAGATCTAAATATAGCCAAAATTATTAGGGTCATGGTCTTAACATTGTAGCGTTGTTCAAATCGACTTGACTGATTTGATTGTATTTTAAAAAAGGAAAATGCTAGATATCAAGAATGGATTTTCTTGATGGATTCAAGAATGACATGGCAGAATAATCACCCTTAGATTTCAGTCTTATTTATCAACGTTTCATAAAAAAAAATACATAATACCCACCGAGCAATGCTATATATCAAGAAAGATTTTATCAAGAAATTGTCCCGAAATTAATGTTAGCCAATAAAATCCCAGCCTGGCCGGAAATCATGGGGTGGTGGGTGTTATGTATTTTTTTTTATGAAACTTTAATAAATAAGATTGAAATCTAAGGGTGATTATTCTGTCATGTCATTCTTGAATTCATCAAGAAAATTCATTCTTGATATCTAGCATTTTCCTTTTCCGTACCCACCACCCCATGATTTTCAGCCAGGCTGAGATTTTATTGGCTAACATTAATTTCGGAACAATTTCTTGATAAAATTGTTATGAATAGTTATTGATATTATCATGCAAAGGTCTACGTTTGTAATTTTCCATTGGATAGATAGAAGATGAACAGTCTAGTTCTAAATTGAATTCGTCAAGATGATGTCTTAATATGTGATTTTCAACATCATAGTACGACTTGATTACAGATATTGAAACTCAAAATTTGAAGGACATTAGCTTATCTTTAAGAATTTCCACCCATGATATTTTACCTTGTGATGTTTTTATCGTTATCTCTCTTGCACTTGGAAAGAGATCTTTCGTTATAATTTCTTTCCGACTCTCATGCCAATTCTTTTGCTGGCCAACATTTGGGTATCCTGTCTGCTATGTTAGACACATAAAGTTCTTAACTCATACTTCTGATATTTGAACACTTCATTCATGAGAAATTAGTTGCAAATGTTTTGGGGGAGGAAACATTCATAGTTATATGTAATAATAGAACTTCTGCTTTTCATCTTTCTTTCTTTCCTTCTTTTCCTTGTCTTTAAAGAGTAACATTTCTATTATTGTTGATTTGCTTTACTGAAAAAAATACAAATGAAATTAACTGCTTTTCTATTTGGTTGGATAGCAAACGATCGATGCTTTACTTGAGTCAGGTTATTCTCTGCTCAAAGAACAACAGTTGATAATGGAAACTAAACTTTCGAAGGAATACATGAAGAACATTGAAGACTAA

Protein sequence

>MS.gene067495.t1

MAKLLLLLRPPTSSHSNSFSFKKPSHSQQFSCVRCCSNSDDENNKKKLSEQSSWETKDSEGRDYLYRLGAEADNMNIAVGQRAGIIDDVFAGNFLGRDSDIVFDYRQKVTRSFQYLQGDYYIAPLFMDKVVTHITKNYLSHLLNAKVPLILGIWGGKGQGKTFQTELIFRAMGVEPVIMSAGELESENAGEPGRLIRERYRTASRVVQNQGKMSCLMINDIDAGLGRFGNTQMTVNNQIVVGTLMNLCDNPTRVSIGQDWREADVTNRIPIIVTGNDLSTIYAPLIRDGRMDKFYWQPNQEDILNIVQRMYEKDGISRDEVEKVVKTFPNQALDFYGALRSRTYDRSILKWVDDIGGAESFASKFLKRRKDQNLPVFIPPEQTIDALLESGYSLLKEQQLIMETKLSKEYMKNIED