AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene22691


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22691.t1 MTR_7g117270 97.011 368 8 2 1 367 165 530 0.0 717
MS.gene22691.t1 MTR_3g083350 42.735 234 124 3 15 246 160 385 6.77e-55 189
MS.gene22691.t1 MTR_3g105530 33.929 336 179 8 1 319 115 424 4.70e-45 160
MS.gene22691.t1 MTR_1g032040 39.184 245 138 5 11 252 127 363 1.13e-41 150
MS.gene22691.t1 MTR_1g032380 39.184 245 138 5 11 252 127 363 1.13e-41 150
MS.gene22691.t1 MTR_1g072550 39.754 244 136 5 11 251 127 362 1.73e-41 150
MS.gene22691.t1 MTR_1g019170 35.458 251 141 5 1 247 97 330 5.02e-37 138
MS.gene22691.t1 MTR_3g029990 35.458 251 141 5 1 247 97 330 3.97e-36 139
MS.gene22691.t1 MTR_3g029990 35.458 251 141 5 1 247 97 330 4.03e-36 139
MS.gene22691.t1 MTR_3g074730 37.548 261 144 6 1 253 136 385 1.05e-35 134
MS.gene22691.t1 MTR_3g030020 32.281 285 170 6 1 279 54 321 1.97e-35 133
MS.gene22691.t1 MTR_2g067960 32.641 337 182 12 23 334 114 430 2.78e-35 134
MS.gene22691.t1 MTR_6g033595 32.827 329 176 12 23 326 149 457 3.57e-35 134
MS.gene22691.t1 MTR_8g089370 32.576 264 169 3 1 262 120 376 1.28e-34 131
MS.gene22691.t1 MTR_1g098960 34.661 251 143 5 1 247 99 332 6.83e-34 130
MS.gene22691.t1 MTR_7g107280 29.968 317 204 5 1 306 111 420 3.74e-31 122
MS.gene22691.t1 MTR_7g088530 32.422 256 164 3 1 255 125 372 4.21e-31 122
MS.gene22691.t1 MTR_0153s0070 31.579 304 139 7 1 288 92 342 1.45e-29 117
MS.gene22691.t1 MTR_0153s0070 33.772 228 121 5 1 212 122 335 2.73e-29 115
MS.gene22691.t1 MTR_4g053720 30.522 249 147 5 1 235 102 338 2.08e-24 102
MS.gene22691.t1 MTR_3g448960 30.588 255 131 6 1 251 99 311 6.42e-24 102
MS.gene22691.t1 MTR_3g063230 25.478 314 197 7 1 296 131 425 1.18e-21 95.9
MS.gene22691.t1 MTR_6g043850 27.103 214 147 1 23 236 132 336 2.98e-21 95.9
MS.gene22691.t1 MTR_3g063230 29.508 183 109 4 123 296 230 401 2.45e-18 85.9
MS.gene22691.t1 MTR_7g018630 27.413 259 166 4 1 251 131 375 3.16e-18 85.9
MS.gene22691.t1 MTR_8g102038 28.718 195 113 5 1 181 56 238 3.98e-14 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22691.t1 AT4G01037 63.660 377 122 6 1 367 157 528 7.44e-151 436
MS.gene22691.t1 AT5G62990 44.141 256 126 5 1 251 149 392 1.25e-62 208
MS.gene22691.t1 AT3G63090 40.000 245 136 6 11 252 130 366 7.40e-44 156
MS.gene22691.t1 AT5G48040 33.333 306 187 6 1 305 122 411 1.37e-40 148
MS.gene22691.t1 AT5G21970 32.911 316 167 7 1 307 134 413 1.63e-37 140
MS.gene22691.t1 AT5G21970 32.911 316 167 7 1 307 134 413 1.63e-37 140
MS.gene22691.t1 AT1G79120 31.418 261 166 2 1 251 138 395 8.69e-37 137
MS.gene22691.t1 AT1G79120 31.418 261 166 2 1 251 138 395 8.69e-37 137
MS.gene22691.t1 AT2G31290 32.677 254 152 4 1 251 104 341 5.21e-36 135
MS.gene22691.t1 AT2G31290 32.677 254 152 4 1 251 104 341 5.21e-36 135
MS.gene22691.t1 AT4G33495 32.847 274 161 7 14 270 134 401 7.94e-34 129
MS.gene22691.t1 AT4G08940 37.255 255 148 6 1 253 144 388 2.28e-33 128
MS.gene22691.t1 AT3G58520 31.365 271 173 3 1 263 102 367 2.50e-32 125
MS.gene22691.t1 AT3G58520 31.518 257 163 3 15 263 128 379 4.94e-32 125
MS.gene22691.t1 AT1G06440 32.941 255 156 7 21 265 135 384 2.60e-30 119
MS.gene22691.t1 AT5G45790 30.255 314 192 6 1 314 62 348 4.97e-30 118
MS.gene22691.t1 AT5G45790 30.255 314 192 6 1 314 147 433 1.88e-29 118
MS.gene22691.t1 AT1G71850 27.931 290 185 6 26 312 137 405 1.42e-26 110
MS.gene22691.t1 AT4G24320 30.657 274 168 7 1 264 103 364 4.14e-26 108
MS.gene22691.t1 AT2G39120 27.165 254 173 3 1 251 111 355 8.69e-17 81.3

Find 81 sgRNAs with CRISPR-Local

Find 89 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGCATTTGGCGAATGATTT+AGG 0.190368 7.4:-1173318 MS.gene22691:CDS
AAAGAGATATAAAACATATC+AGG 0.276380 7.4:+1172826 None:intergenic
TCAAGATTACCACCGTTCTC+TGG 0.326785 7.4:+1172363 None:intergenic
TACTCAGATTTCTCTATGAT+TGG 0.332939 7.4:-1173003 MS.gene22691:CDS
GTTAGAGAAAATTGGGCATT+TGG 0.343668 7.4:-1173331 MS.gene22691:CDS
ACAGGGATTCTGTGTTCCTT+AGG 0.353477 7.4:-1172795 MS.gene22691:CDS
TCTGAGTAAGGCGATATATA+AGG 0.364252 7.4:+1173018 None:intergenic
CGTTCTCTGGGACGACCATC+AGG 0.372597 7.4:+1172376 None:intergenic
AGCAGAATTTAATTATAGAT+AGG 0.391261 7.4:-1173128 MS.gene22691:CDS
AGATAGAGATGGAGATGGGA+TGG 0.396749 7.4:-1172653 MS.gene22691:CDS
ACCTCCTCGTCATCAAAATC+TGG 0.414715 7.4:+1172487 None:intergenic
TTCGCGACACCATTTGTCAT+AGG 0.422027 7.4:-1173281 MS.gene22691:CDS
AAAGTTGTTCAGACTGAAAG+AGG 0.431002 7.4:-1173243 MS.gene22691:CDS
TGCACTTGAATTAACACATT+GGG 0.442420 7.4:-1173217 MS.gene22691:CDS
AGCTTTATCTTGAAGAATTG+AGG 0.442851 7.4:-1173431 MS.gene22691:CDS
GGACAGATTGTTACTTGTAA+AGG 0.447014 7.4:-1172740 MS.gene22691:CDS
TTTGAAAGATTAAGACCCTT+AGG 0.447819 7.4:+1173078 None:intergenic
ATATCTCTTTGAAAGGAGAC+AGG 0.456034 7.4:-1172813 MS.gene22691:CDS
CAGGGATTCTGTGTTCCTTA+GGG 0.456981 7.4:-1172794 MS.gene22691:CDS
CGACCGGCACCCCTACCCTT+AGG 0.457781 7.4:+1172682 None:intergenic
TGATATTCCACGATTTCCTA+AGG 0.460152 7.4:-1172698 MS.gene22691:CDS
ATCTTGAAGAATTGAGGGTT+AGG 0.461053 7.4:-1173425 MS.gene22691:CDS
CTCTGGATACCTATGACAAA+TGG 0.461089 7.4:+1173272 None:intergenic
AAGGGTCTTAATCTTTCAAA+AGG 0.467749 7.4:-1173075 MS.gene22691:CDS
GCTTTATCTTGAAGAATTGA+GGG 0.468992 7.4:-1173430 MS.gene22691:CDS
TCCACGATTTCCTAAGGGTA+GGG 0.472983 7.4:-1172692 MS.gene22691:CDS
GATAGAGATGGAGATGGGAT+GGG 0.477156 7.4:-1172652 MS.gene22691:CDS
AGCTTTACTCTATTAAACTT+AGG 0.478690 7.4:+1173102 None:intergenic
TTTCCTAAGGGTAGGGGTGC+CGG 0.484180 7.4:-1172685 MS.gene22691:CDS
GCAGAATTTAATTATAGATA+GGG 0.485320 7.4:-1173127 MS.gene22691:CDS
CAAGATTACCACCGTTCTCT+GGG 0.485705 7.4:+1172364 None:intergenic
TAATAGAGTAAAGCTTCCTA+AGG 0.486104 7.4:-1173094 MS.gene22691:CDS
ATTGAGGGTTAGGAATGAAA+TGG 0.486805 7.4:-1173415 MS.gene22691:CDS
CGCAAGACAGAATAATGAAA+AGG 0.489822 7.4:-1172416 MS.gene22691:CDS
AATTGAGAGGGATGTTGATA+AGG 0.491946 7.4:-1172852 MS.gene22691:CDS
ATCATAGAGAAATCTGAGTA+AGG 0.496079 7.4:+1173006 None:intergenic
ATCTCTATCTCTAGTGCGAC+CGG 0.501008 7.4:+1172666 None:intergenic
ATGTTGTTGTTACTAAGCTT+AGG 0.506899 7.4:-1173389 MS.gene22691:CDS
CGATTCTCACAGCAATTGAG+AGG 0.531952 7.4:-1172865 MS.gene22691:CDS
CAATGTGTTAATTCAAGTGC+AGG 0.536567 7.4:+1173219 None:intergenic
CTTGTTCCATCATTCCCTGA+TGG 0.538863 7.4:-1172391 MS.gene22691:CDS
GAAATTGTTGATGATGCCGT+TGG 0.539200 7.4:-1173367 MS.gene22691:CDS
GGACGACCATCAGGGAATGA+TGG 0.544132 7.4:+1172385 None:intergenic
AAGAGATATAAAACATATCA+GGG 0.552458 7.4:+1172827 None:intergenic
GAAATTTAGAATGACTTCTG+AGG 0.553098 7.4:-1173460 None:intergenic
TGCGGCCGAGCTGTCTGCGG+AGG 0.560311 7.4:-1173175 MS.gene22691:CDS
CTGATGGTCGTCCCAGAGAA+CGG 0.562404 7.4:-1172375 MS.gene22691:CDS
CCACGATTTCCTAAGGGTAG+GGG 0.563389 7.4:-1172691 MS.gene22691:CDS
AGCTTATCGAGATTCTCAGT+TGG 0.565019 7.4:-1172770 MS.gene22691:CDS
ACTAGAGATAGAGATGGAGA+TGG 0.565748 7.4:-1172658 MS.gene22691:CDS
TTCTGCGGCCGAGCTGTCTG+CGG 0.565854 7.4:-1173178 MS.gene22691:CDS
ACGATGATATCGATGATGAC+TGG 0.572213 7.4:-1172534 MS.gene22691:CDS
GAATGATATTGATAGCAGAC+AGG 0.573642 7.4:-1172626 MS.gene22691:CDS
CTGCACTTGAATTAACACAT+TGG 0.577423 7.4:-1173218 MS.gene22691:CDS
GGAGAATCGAATTAGAGAAG+TGG 0.581481 7.4:-1173154 MS.gene22691:CDS
ACAGGATGAAAGTGGTGAAG+AGG 0.582031 7.4:-1172608 MS.gene22691:CDS
ATCTTTCAAAAGGTGAGATG+AGG 0.582454 7.4:-1173065 MS.gene22691:CDS
TCCTCAGCTTGCAGTTTCTG+CGG 0.583709 7.4:-1173193 MS.gene22691:CDS
GGTCGCACTAGAGATAGAGA+TGG 0.588250 7.4:-1172664 MS.gene22691:CDS
CTAGAGATAGAGATGGAGAT+GGG 0.591787 7.4:-1172657 MS.gene22691:CDS
GATAGCAGACAGGATGAAAG+TGG 0.596310 7.4:-1172616 MS.gene22691:CDS
CCCCTACCCTTAGGAAATCG+TGG 0.600344 7.4:+1172691 None:intergenic
GCCGCAGAAACTGCAAGCTG+AGG 0.600466 7.4:+1173192 None:intergenic
GATTCTCACAGCAATTGAGA+GGG 0.608241 7.4:-1172864 MS.gene22691:CDS
TATCTCTTTGAAAGGAGACA+GGG 0.611518 7.4:-1172812 MS.gene22691:CDS
AATAGAGTAAAGCTTCCTAA+GGG 0.615219 7.4:-1173093 MS.gene22691:CDS
ATTCTCCTCCGCAGACAGCT+CGG 0.615702 7.4:+1173170 None:intergenic
AATCTCGATAAGCTTCCCTA+AGG 0.627558 7.4:+1172779 None:intergenic
GATATTCCACGATTTCCTAA+GGG 0.627966 7.4:-1172697 MS.gene22691:CDS
TCCTCGTCATCAAAATCTGG+TGG 0.632166 7.4:+1172490 None:intergenic
GTGGTGAAGAGGAACAAGAA+TGG 0.632592 7.4:-1172597 MS.gene22691:CDS
CATCAGGGAATGATGGAACA+AGG 0.636284 7.4:+1172392 None:intergenic
AGATTCTCAGTTGGTAGACA+AGG 0.639646 7.4:-1172761 MS.gene22691:CDS
TGATGATGCCGTTGGAAAAG+CGG 0.641358 7.4:-1173359 MS.gene22691:CDS
GTTCTCTGGGACGACCATCA+GGG 0.643365 7.4:+1172377 None:intergenic
TATGATTGGTTTGAACACGC+CGG 0.658259 7.4:-1172989 MS.gene22691:CDS
TGACGAGGAGGTAGAAACAT+CGG 0.661367 7.4:-1172476 MS.gene22691:CDS
GCTGATGATTTAATCAGCGA+TGG 0.662081 7.4:-1172568 MS.gene22691:CDS
TTCCACGATTTCCTAAGGGT+AGG 0.664321 7.4:-1172693 MS.gene22691:CDS
ATGGTGTCGCGAAATTCTCG+AGG 0.669888 7.4:+1173291 None:intergenic
ATGGTCGTCCCAGAGAACGG+TGG 0.738040 7.4:-1172372 MS.gene22691:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAGATATAAAACATATC+AGG + chr7.4:1172996-1173015 None:intergenic 20.0%
!! AAGAGATATAAAACATATCA+GGG + chr7.4:1172995-1173014 None:intergenic 20.0%
!! AGCAGAATTTAATTATAGAT+AGG - chr7.4:1172691-1172710 MS.gene22691:CDS 20.0%
!! GCAGAATTTAATTATAGATA+GGG - chr7.4:1172692-1172711 MS.gene22691:CDS 20.0%
!!! ATGTTTTATATCTCTTTGAA+AGG - chr7.4:1172999-1173018 MS.gene22691:CDS 20.0%
! AGCTTTACTCTATTAAACTT+AGG + chr7.4:1172720-1172739 None:intergenic 25.0%
!! GGATTTTGTTAGAGAAAATT+GGG - chr7.4:1172481-1172500 MS.gene22691:CDS 25.0%
!! TGAACAACTTTAAAAAACTC+TGG + chr7.4:1172567-1172586 None:intergenic 25.0%
AAGGGTCTTAATCTTTCAAA+AGG - chr7.4:1172744-1172763 MS.gene22691:CDS 30.0%
AATAGAGTAAAGCTTCCTAA+GGG - chr7.4:1172726-1172745 MS.gene22691:CDS 30.0%
ATCATAGAGAAATCTGAGTA+AGG + chr7.4:1172816-1172835 None:intergenic 30.0%
GCTTTATCTTGAAGAATTGA+GGG - chr7.4:1172389-1172408 MS.gene22691:CDS 30.0%
TAATAGAGTAAAGCTTCCTA+AGG - chr7.4:1172725-1172744 MS.gene22691:CDS 30.0%
TACTCAGATTTCTCTATGAT+TGG - chr7.4:1172816-1172835 MS.gene22691:CDS 30.0%
TGCACTTGAATTAACACATT+GGG - chr7.4:1172602-1172621 MS.gene22691:CDS 30.0%
TTTGAAAGATTAAGACCCTT+AGG + chr7.4:1172744-1172763 None:intergenic 30.0%
! AGCTTTATCTTGAAGAATTG+AGG - chr7.4:1172388-1172407 MS.gene22691:CDS 30.0%
! ATGTTGTTGTTACTAAGCTT+AGG - chr7.4:1172430-1172449 MS.gene22691:CDS 30.0%
! CGGATTTTGTTAGAGAAAAT+TGG - chr7.4:1172480-1172499 MS.gene22691:CDS 30.0%
AAAGGAAAAACTTCGTTCGT+TGG - chr7.4:1173097-1173116 MS.gene22691:CDS 35.0%
AAAGTTGTTCAGACTGAAAG+AGG - chr7.4:1172576-1172595 MS.gene22691:CDS 35.0%
AATTGAGAGGGATGTTGATA+AGG - chr7.4:1172967-1172986 MS.gene22691:CDS 35.0%
ATCTTGAAGAATTGAGGGTT+AGG - chr7.4:1172394-1172413 MS.gene22691:CDS 35.0%
ATCTTTCAAAAGGTGAGATG+AGG - chr7.4:1172754-1172773 MS.gene22691:CDS 35.0%
ATTGAGGGTTAGGAATGAAA+TGG - chr7.4:1172404-1172423 MS.gene22691:CDS 35.0%
CAATGTGTTAATTCAAGTGC+AGG + chr7.4:1172603-1172622 None:intergenic 35.0%
CGCAAGACAGAATAATGAAA+AGG - chr7.4:1173403-1173422 MS.gene22691:CDS 35.0%
CTGCACTTGAATTAACACAT+TGG - chr7.4:1172601-1172620 MS.gene22691:CDS 35.0%
GATATTCCACGATTTCCTAA+GGG - chr7.4:1173122-1173141 MS.gene22691:CDS 35.0%
GTTAGAGAAAATTGGGCATT+TGG - chr7.4:1172488-1172507 MS.gene22691:CDS 35.0%
TCTGAGTAAGGCGATATATA+AGG + chr7.4:1172804-1172823 None:intergenic 35.0%
TGATATTCCACGATTTCCTA+AGG - chr7.4:1173121-1173140 MS.gene22691:CDS 35.0%
! ATATCTCTTTGAAAGGAGAC+AGG - chr7.4:1173006-1173025 MS.gene22691:CDS 35.0%
! GAATGATATTGATAGCAGAC+AGG - chr7.4:1173193-1173212 MS.gene22691:CDS 35.0%
! GGACAGATTGTTACTTGTAA+AGG - chr7.4:1173079-1173098 MS.gene22691:CDS 35.0%
! TATCTCTTTGAAAGGAGACA+GGG - chr7.4:1173007-1173026 MS.gene22691:CDS 35.0%
!! AACAAAATCCGCTTTTCCAA+CGG + chr7.4:1172471-1172490 None:intergenic 35.0%
!! TAACTTCACTCATTTTCGAG+AGG - chr7.4:1172926-1172945 MS.gene22691:CDS 35.0%
AATCTCGATAAGCTTCCCTA+AGG + chr7.4:1173043-1173062 None:intergenic 40.0%
ACGATGATATCGATGATGAC+TGG - chr7.4:1173285-1173304 MS.gene22691:CDS 40.0%
ACTAGAGATAGAGATGGAGA+TGG - chr7.4:1173161-1173180 MS.gene22691:CDS 40.0%
AGCTTATCGAGATTCTCAGT+TGG - chr7.4:1173049-1173068 MS.gene22691:CDS 40.0%
CTAGAGATAGAGATGGAGAT+GGG - chr7.4:1173162-1173181 MS.gene22691:CDS 40.0%
CTCTGGATACCTATGACAAA+TGG + chr7.4:1172550-1172569 None:intergenic 40.0%
GATTCTCACAGCAATTGAGA+GGG - chr7.4:1172955-1172974 MS.gene22691:CDS 40.0%
GCTGATGATTTAATCAGCGA+TGG - chr7.4:1173251-1173270 MS.gene22691:CDS 40.0%
GGAGAATCGAATTAGAGAAG+TGG - chr7.4:1172665-1172684 MS.gene22691:CDS 40.0%
! CAAGCATGCTTCTCTTTTTC+CGG + chr7.4:1172852-1172871 None:intergenic 40.0%
! GAAAAAGAGAAGCATGCTTG+TGG - chr7.4:1172852-1172871 MS.gene22691:CDS 40.0%
!! AGATTCTCAGTTGGTAGACA+AGG - chr7.4:1173058-1173077 MS.gene22691:CDS 40.0%
!! GAAATTGTTGATGATGCCGT+TGG - chr7.4:1172452-1172471 MS.gene22691:CDS 40.0%
!! TATGATTGGTTTGAACACGC+CGG - chr7.4:1172830-1172849 MS.gene22691:CDS 40.0%
ACAGGATGAAAGTGGTGAAG+AGG - chr7.4:1173211-1173230 MS.gene22691:CDS 45.0%
ACAGGGATTCTGTGTTCCTT+AGG - chr7.4:1173024-1173043 MS.gene22691:CDS 45.0%
ACCTCCTCGTCATCAAAATC+TGG + chr7.4:1173335-1173354 None:intergenic 45.0%
AGATAGAGATGGAGATGGGA+TGG - chr7.4:1173166-1173185 MS.gene22691:CDS 45.0%
ATCTCTATCTCTAGTGCGAC+CGG + chr7.4:1173156-1173175 None:intergenic 45.0%
CAGGGATTCTGTGTTCCTTA+GGG - chr7.4:1173025-1173044 MS.gene22691:CDS 45.0%
CGATTCTCACAGCAATTGAG+AGG - chr7.4:1172954-1172973 MS.gene22691:CDS 45.0%
CTTGTTCCATCATTCCCTGA+TGG - chr7.4:1173428-1173447 MS.gene22691:CDS 45.0%
GATAGAGATGGAGATGGGAT+GGG - chr7.4:1173167-1173186 MS.gene22691:CDS 45.0%
GATAGCAGACAGGATGAAAG+TGG - chr7.4:1173203-1173222 MS.gene22691:CDS 45.0%
GGGCATTTGGCGAATGATTT+AGG - chr7.4:1172501-1172520 MS.gene22691:CDS 45.0%
GTGGTGAAGAGGAACAAGAA+TGG - chr7.4:1173222-1173241 MS.gene22691:CDS 45.0%
TCCACGATTTCCTAAGGGTA+GGG - chr7.4:1173127-1173146 MS.gene22691:CDS 45.0%
TCCTCGTCATCAAAATCTGG+TGG + chr7.4:1173332-1173351 None:intergenic 45.0%
TGACGAGGAGGTAGAAACAT+CGG - chr7.4:1173343-1173362 MS.gene22691:CDS 45.0%
TTCCACGATTTCCTAAGGGT+AGG - chr7.4:1173126-1173145 MS.gene22691:CDS 45.0%
TTCGCGACACCATTTGTCAT+AGG - chr7.4:1172538-1172557 MS.gene22691:CDS 45.0%
! CATCAGGGAATGATGGAACA+AGG + chr7.4:1173430-1173449 None:intergenic 45.0%
! TGATGATGCCGTTGGAAAAG+CGG - chr7.4:1172460-1172479 MS.gene22691:CDS 45.0%
!!! ACCACCAGATTTTGATGACG+AGG - chr7.4:1173328-1173347 MS.gene22691:CDS 45.0%
!!! ACCAGATTTTGATGACGAGG+AGG - chr7.4:1173331-1173350 MS.gene22691:CDS 45.0%
CCACGATTTCCTAAGGGTAG+GGG - chr7.4:1173128-1173147 MS.gene22691:CDS 50.0%
GGTCGCACTAGAGATAGAGA+TGG - chr7.4:1173155-1173174 MS.gene22691:CDS 50.0%
TCCTCAGCTTGCAGTTTCTG+CGG - chr7.4:1172626-1172645 MS.gene22691:CDS 50.0%
!! ATGGTGTCGCGAAATTCTCG+AGG + chr7.4:1172531-1172550 None:intergenic 50.0%
ATTCTCCTCCGCAGACAGCT+CGG + chr7.4:1172652-1172671 None:intergenic 55.0%
CCCCTACCCTTAGGAAATCG+TGG + chr7.4:1173131-1173150 None:intergenic 55.0%
CTGATGGTCGTCCCAGAGAA+CGG - chr7.4:1173444-1173463 MS.gene22691:CDS 55.0%
GGACGACCATCAGGGAATGA+TGG + chr7.4:1173437-1173456 None:intergenic 55.0%
! TTTCCTAAGGGTAGGGGTGC+CGG - chr7.4:1173134-1173153 MS.gene22691:CDS 55.0%
!! GTTCTCTGGGACGACCATCA+GGG + chr7.4:1173445-1173464 None:intergenic 55.0%
ATGGTCGTCCCAGAGAACGG+TGG - chr7.4:1173447-1173466 MS.gene22691:CDS 60.0%
GCCGCAGAAACTGCAAGCTG+AGG + chr7.4:1172630-1172649 None:intergenic 60.0%
!! CGTTCTCTGGGACGACCATC+AGG + chr7.4:1173446-1173465 None:intergenic 60.0%
TTCTGCGGCCGAGCTGTCTG+CGG - chr7.4:1172641-1172660 MS.gene22691:CDS 65.0%
CGACCGGCACCCCTACCCTT+AGG + chr7.4:1173140-1173159 None:intergenic 70.0%
TGCGGCCGAGCTGTCTGCGG+AGG - chr7.4:1172644-1172663 MS.gene22691:CDS 75.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 1172369 1173472 1172369 ID=MS.gene22691
chr7.4 mRNA 1172369 1173472 1172369 ID=MS.gene22691.t1;Parent=MS.gene22691
chr7.4 exon 1172369 1173472 1172369 ID=MS.gene22691.t1.exon1;Parent=MS.gene22691.t1
chr7.4 CDS 1172369 1173472 1172369 ID=cds.MS.gene22691.t1;Parent=MS.gene22691.t1
Gene Sequence

>MS.gene22691

ATGACTTCTGAGGCTGAAAAGCTTTATCTTGAAGAATTGAGGGTTAGGAATGAAATGGAAGATGTTGTTGTTACTAAGCTTAGGAAATTGTTGATGATGCCGTTGGAAAAGCGGATTTTGTTAGAGAAAATTGGGCATTTGGCGAATGATTTAGGACTTCCTCGAGAATTTCGCGACACCATTTGTCATAGGTATCCAGAGTTTTTTAAAGTTGTTCAGACTGAAAGAGGTCCTGCACTTGAATTAACACATTGGGATCCTCAGCTTGCAGTTTCTGCGGCCGAGCTGTCTGCGGAGGAGAATCGAATTAGAGAAGTGGAAGAGCAGAATTTAATTATAGATAGGGCTCCTAAGTTTAATAGAGTAAAGCTTCCTAAGGGTCTTAATCTTTCAAAAGGTGAGATGAGGAAGATAATGCAGTTTAGAGACATTCCTTATATATCGCCTTACTCAGATTTCTCTATGATTGGTTTGAACACGCCGGAAAAAGAGAAGCATGCTTGTGGAGTTATTCATGAGATTTTGAGTCTTACACTTGAGAAGCGAACTCTTGTTGATAACTTCACTCATTTTCGAGAGGAGTTTCGATTCTCACAGCAATTGAGAGGGATGTTGATAAGGCACCCTGATATGTTTTATATCTCTTTGAAAGGAGACAGGGATTCTGTGTTCCTTAGGGAAGCTTATCGAGATTCTCAGTTGGTAGACAAGGACAGATTGTTACTTGTAAAGGAAAAACTTCGTTCGTTGGTTGATATTCCACGATTTCCTAAGGGTAGGGGTGCCGGTCGCACTAGAGATAGAGATGGAGATGGGATGGGAGAGAATGATATTGATAGCAGACAGGATGAAAGTGGTGAAGAGGAACAAGAATGGTCAGATGCTGATGATTTAATCAGCGATGGTGATGATGATGACGATGATATCGATGATGACTGGATTGATGATGATGATGATACACCACCAGATTTTGATGACGAGGAGGTAGAAACATCGGAAATTGAAAAGAGAAAGACAATTACACGAGTTCAAGACGCAAGACAGAATAATGAAAAGGTCCTTGTTCCATCATTCCCTGATGGTCGTCCCAGAGAACGGTGGTAA

Protein sequence

>MS.gene22691.t1

MTSEAEKLYLEELRVRNEMEDVVVTKLRKLLMMPLEKRILLEKIGHLANDLGLPREFRDTICHRYPEFFKVVQTERGPALELTHWDPQLAVSAAELSAEENRIREVEEQNLIIDRAPKFNRVKLPKGLNLSKGEMRKIMQFRDIPYISPYSDFSMIGLNTPEKEKHACGVIHEILSLTLEKRTLVDNFTHFREEFRFSQQLRGMLIRHPDMFYISLKGDRDSVFLREAYRDSQLVDKDRLLLVKEKLRSLVDIPRFPKGRGAGRTRDRDGDGMGENDIDSRQDESGEEEQEWSDADDLISDGDDDDDDIDDDWIDDDDDTPPDFDDEEVETSEIEKRKTITRVQDARQNNEKVLVPSFPDGRPRERW