Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22691.t1 | XP_003626564.1 | 92.9 | 367 | 25 | 1 | 1 | 367 | 165 | 530 | 1.80E-152 | 548.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22691.t1 | A0MFS5 | 77.1 | 258 | 59 | 0 | 1 | 258 | 157 | 414 | 1.4e-113 | 411.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22691.t1 | G7L432 | 92.9 | 367 | 25 | 1 | 1 | 367 | 165 | 530 | 1.3e-152 | 548.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049150 | MS.gene22691 | 0.820467 | 6.75E-53 | -1.69E-46 |
MS.gene049151 | MS.gene22691 | 0.830012 | 3.73E-55 | -1.69E-46 |
MS.gene049153 | MS.gene22691 | 0.828572 | 8.34E-55 | -1.69E-46 |
MS.gene049230 | MS.gene22691 | 0.852597 | 4.16E-61 | -1.69E-46 |
MS.gene049297 | MS.gene22691 | 0.887597 | 1.24E-72 | -1.69E-46 |
MS.gene04933 | MS.gene22691 | 0.822768 | 1.98E-53 | -1.69E-46 |
MS.gene049378 | MS.gene22691 | 0.878254 | 3.26E-69 | -1.69E-46 |
MS.gene049669 | MS.gene22691 | 0.812124 | 4.96E-51 | -1.69E-46 |
MS.gene049758 | MS.gene22691 | 0.832197 | 1.08E-55 | -1.69E-46 |
MS.gene04987 | MS.gene22691 | 0.801544 | 8.57E-49 | -1.69E-46 |
MS.gene049910 | MS.gene22691 | 0.844266 | 8.41E-59 | -1.69E-46 |
MS.gene049915 | MS.gene22691 | 0.812279 | 4.59E-51 | -1.69E-46 |
MS.gene049993 | MS.gene22691 | 0.803253 | 3.81E-49 | -1.69E-46 |
MS.gene050168 | MS.gene22691 | 0.809552 | 1.79E-50 | -1.69E-46 |
MS.gene050226 | MS.gene22691 | 0.892244 | 1.90E-74 | -1.69E-46 |
MS.gene050227 | MS.gene22691 | 0.911183 | 8.11E-83 | -1.69E-46 |
MS.gene050228 | MS.gene22691 | 0.901598 | 2.28E-78 | -1.69E-46 |
MS.gene050303 | MS.gene22691 | 0.845681 | 3.49E-59 | -1.69E-46 |
MS.gene050330 | MS.gene22691 | -0.845802 | 3.24E-59 | -1.69E-46 |
MS.gene050426 | MS.gene22691 | -0.828447 | 8.94E-55 | -1.69E-46 |
MS.gene050442 | MS.gene22691 | 0.824073 | 9.83E-54 | -1.69E-46 |
MS.gene050558 | MS.gene22691 | 0.827982 | 1.16E-54 | -1.69E-46 |
MS.gene050605 | MS.gene22691 | 0.824798 | 6.64E-54 | -1.69E-46 |
MS.gene050623 | MS.gene22691 | -0.910153 | 2.58E-82 | -1.69E-46 |
MS.gene050642 | MS.gene22691 | 0.970935 | 2.23E-132 | -1.69E-46 |
MS.gene050680 | MS.gene22691 | 0.808485 | 3.03E-50 | -1.69E-46 |
MS.gene050719 | MS.gene22691 | 0.807599 | 4.67E-50 | -1.69E-46 |
MS.gene050721 | MS.gene22691 | 0.807212 | 5.64E-50 | -1.69E-46 |
MS.gene050724 | MS.gene22691 | 0.800833 | 1.20E-48 | -1.69E-46 |
MS.gene050750 | MS.gene22691 | 0.838235 | 3.24E-57 | -1.69E-46 |
MS.gene050820 | MS.gene22691 | 0.83907 | 1.97E-57 | -1.69E-46 |
MS.gene050953 | MS.gene22691 | 0.834384 | 3.09E-56 | -1.69E-46 |
MS.gene050987 | MS.gene22691 | 0.814357 | 1.61E-51 | -1.69E-46 |
MS.gene051064 | MS.gene22691 | 0.813845 | 2.08E-51 | -1.69E-46 |
MS.gene05119 | MS.gene22691 | -0.803826 | 2.90E-49 | -1.69E-46 |
MS.gene051240 | MS.gene22691 | 0.801906 | 7.22E-49 | -1.69E-46 |
MS.gene051257 | MS.gene22691 | 0.848888 | 4.60E-60 | -1.69E-46 |
MS.gene051349 | MS.gene22691 | 0.811943 | 5.44E-51 | -1.69E-46 |
MS.gene051368 | MS.gene22691 | 0.800831 | 1.20E-48 | -1.69E-46 |
MS.gene051370 | MS.gene22691 | 0.816513 | 5.32E-52 | -1.69E-46 |
MS.gene05137 | MS.gene22691 | 0.809436 | 1.89E-50 | -1.69E-46 |
MS.gene051535 | MS.gene22691 | 0.817554 | 3.10E-52 | -1.69E-46 |
MS.gene051662 | MS.gene22691 | 0.815705 | 8.06E-52 | -1.69E-46 |
MS.gene051663 | MS.gene22691 | 0.806262 | 8.96E-50 | -1.69E-46 |
MS.gene051860 | MS.gene22691 | 0.856449 | 3.19E-62 | -1.69E-46 |
MS.gene051983 | MS.gene22691 | 0.928832 | 1.65E-92 | -1.69E-46 |
MS.gene052011 | MS.gene22691 | -0.832817 | 7.61E-56 | -1.69E-46 |
MS.gene052077 | MS.gene22691 | 0.867194 | 1.64E-65 | -1.69E-46 |
MS.gene052176 | MS.gene22691 | 0.904034 | 1.87E-79 | -1.69E-46 |
MS.gene052302 | MS.gene22691 | 0.837194 | 6.00E-57 | -1.69E-46 |
MS.gene052309 | MS.gene22691 | -0.88177 | 1.82E-70 | -1.69E-46 |
MS.gene052333 | MS.gene22691 | 0.833743 | 4.47E-56 | -1.69E-46 |
MS.gene052340 | MS.gene22691 | 0.815021 | 1.14E-51 | -1.69E-46 |
MS.gene052376 | MS.gene22691 | 0.856504 | 3.08E-62 | -1.69E-46 |
MS.gene052389 | MS.gene22691 | 0.869762 | 2.43E-66 | -1.69E-46 |
MS.gene052426 | MS.gene22691 | 0.804416 | 2.18E-49 | -1.69E-46 |
MS.gene052586 | MS.gene22691 | 0.809312 | 2.01E-50 | -1.69E-46 |
MS.gene052600 | MS.gene22691 | 0.88602 | 4.92E-72 | -1.69E-46 |
MS.gene052858 | MS.gene22691 | 0.802689 | 4.98E-49 | -1.69E-46 |
MS.gene052860 | MS.gene22691 | 0.802714 | 4.92E-49 | -1.69E-46 |
MS.gene053216 | MS.gene22691 | 0.811995 | 5.30E-51 | -1.69E-46 |
MS.gene053494 | MS.gene22691 | 0.80056 | 1.36E-48 | -1.69E-46 |
MS.gene053836 | MS.gene22691 | 0.878933 | 1.88E-69 | -1.69E-46 |
MS.gene053907 | MS.gene22691 | 0.820596 | 6.31E-53 | -1.69E-46 |
MS.gene054183 | MS.gene22691 | 0.822268 | 2.59E-53 | -1.69E-46 |
MS.gene054291 | MS.gene22691 | -0.81138 | 7.21E-51 | -1.69E-46 |
MS.gene054349 | MS.gene22691 | 0.819185 | 1.33E-52 | -1.69E-46 |
MS.gene054379 | MS.gene22691 | 0.80232 | 5.93E-49 | -1.69E-46 |
MS.gene054405 | MS.gene22691 | 0.82565 | 4.17E-54 | -1.69E-46 |
MS.gene054468 | MS.gene22691 | 0.80888 | 2.49E-50 | -1.69E-46 |
MS.gene054473 | MS.gene22691 | 0.804704 | 1.90E-49 | -1.69E-46 |
MS.gene054537 | MS.gene22691 | 0.803138 | 4.02E-49 | -1.69E-46 |
MS.gene054542 | MS.gene22691 | 0.801717 | 7.89E-49 | -1.69E-46 |
MS.gene054657 | MS.gene22691 | 0.814474 | 1.51E-51 | -1.69E-46 |
MS.gene054719 | MS.gene22691 | 0.805604 | 1.23E-49 | -1.69E-46 |
MS.gene054930 | MS.gene22691 | 0.865156 | 7.24E-65 | -1.69E-46 |
MS.gene054942 | MS.gene22691 | 0.893204 | 7.81E-75 | -1.69E-46 |
MS.gene054983 | MS.gene22691 | 0.866733 | 2.30E-65 | -1.69E-46 |
MS.gene05510 | MS.gene22691 | 0.831348 | 1.76E-55 | -1.69E-46 |
MS.gene055358 | MS.gene22691 | 0.821748 | 3.42E-53 | -1.69E-46 |
MS.gene055367 | MS.gene22691 | 0.82649 | 2.64E-54 | -1.69E-46 |
MS.gene055422 | MS.gene22691 | 0.80224 | 6.16E-49 | -1.69E-46 |
MS.gene05553 | MS.gene22691 | 0.847214 | 1.33E-59 | -1.69E-46 |
MS.gene055701 | MS.gene22691 | 0.859722 | 3.40E-63 | -1.69E-46 |
MS.gene05595 | MS.gene22691 | 0.801072 | 1.07E-48 | -1.69E-46 |
MS.gene056087 | MS.gene22691 | 0.860395 | 2.13E-63 | -1.69E-46 |
MS.gene056296 | MS.gene22691 | 0.819375 | 1.20E-52 | -1.69E-46 |
MS.gene056506 | MS.gene22691 | 0.855363 | 6.63E-62 | -1.69E-46 |
MS.gene056552 | MS.gene22691 | 0.811594 | 6.47E-51 | -1.69E-46 |
MS.gene056612 | MS.gene22691 | 0.802796 | 4.73E-49 | -1.69E-46 |
MS.gene056723 | MS.gene22691 | 0.817243 | 3.65E-52 | -1.69E-46 |
MS.gene056875 | MS.gene22691 | 0.808543 | 2.94E-50 | -1.69E-46 |
MS.gene056899 | MS.gene22691 | -0.806062 | 9.87E-50 | -1.69E-46 |
MS.gene056979 | MS.gene22691 | 0.927062 | 1.98E-91 | -1.69E-46 |
MS.gene057026 | MS.gene22691 | 0.800247 | 1.58E-48 | -1.69E-46 |
MS.gene057060 | MS.gene22691 | 0.806284 | 8.87E-50 | -1.69E-46 |
MS.gene057079 | MS.gene22691 | 0.817877 | 2.63E-52 | -1.69E-46 |
MS.gene057121 | MS.gene22691 | 0.860862 | 1.54E-63 | -1.69E-46 |
MS.gene057555 | MS.gene22691 | 0.813591 | 2.37E-51 | -1.69E-46 |
MS.gene05761 | MS.gene22691 | 0.80364 | 3.17E-49 | -1.69E-46 |
MS.gene057639 | MS.gene22691 | 0.833953 | 3.97E-56 | -1.69E-46 |
MS.gene057750 | MS.gene22691 | 0.804222 | 2.40E-49 | -1.69E-46 |
MS.gene057967 | MS.gene22691 | 0.835636 | 1.50E-56 | -1.69E-46 |
MS.gene058002 | MS.gene22691 | 0.833298 | 5.78E-56 | -1.69E-46 |
MS.gene05811 | MS.gene22691 | 0.836809 | 7.53E-57 | -1.69E-46 |
MS.gene058139 | MS.gene22691 | 0.833725 | 4.52E-56 | -1.69E-46 |
MS.gene058142 | MS.gene22691 | 0.882894 | 7.10E-71 | -1.69E-46 |
MS.gene058146 | MS.gene22691 | 0.812624 | 3.86E-51 | -1.69E-46 |
MS.gene058200 | MS.gene22691 | 0.802747 | 4.84E-49 | -1.69E-46 |
MS.gene058276 | MS.gene22691 | 0.827107 | 1.88E-54 | -1.69E-46 |
MS.gene058399 | MS.gene22691 | 0.822061 | 2.90E-53 | -1.69E-46 |
MS.gene058435 | MS.gene22691 | 0.835816 | 1.35E-56 | -1.69E-46 |
MS.gene058548 | MS.gene22691 | 0.804143 | 2.49E-49 | -1.69E-46 |
MS.gene058549 | MS.gene22691 | 0.808078 | 3.69E-50 | -1.69E-46 |
MS.gene058710 | MS.gene22691 | 0.842575 | 2.38E-58 | -1.69E-46 |
MS.gene058749 | MS.gene22691 | 0.845009 | 5.30E-59 | -1.69E-46 |
MS.gene058833 | MS.gene22691 | 0.851526 | 8.38E-61 | -1.69E-46 |
MS.gene05907 | MS.gene22691 | 0.817065 | 4.00E-52 | -1.69E-46 |
MS.gene059128 | MS.gene22691 | 0.810945 | 8.96E-51 | -1.69E-46 |
MS.gene059247 | MS.gene22691 | 0.872089 | 4.16E-67 | -1.69E-46 |
MS.gene059249 | MS.gene22691 | 0.828137 | 1.06E-54 | -1.69E-46 |
MS.gene059285 | MS.gene22691 | 0.836213 | 1.07E-56 | -1.69E-46 |
MS.gene059511 | MS.gene22691 | 0.803559 | 3.29E-49 | -1.69E-46 |
MS.gene05954 | MS.gene22691 | 0.802989 | 4.32E-49 | -1.69E-46 |
MS.gene059569 | MS.gene22691 | 0.810396 | 1.18E-50 | -1.69E-46 |
MS.gene059609 | MS.gene22691 | 0.806458 | 8.15E-50 | -1.69E-46 |
MS.gene059710 | MS.gene22691 | 0.80245 | 5.58E-49 | -1.69E-46 |
MS.gene05979 | MS.gene22691 | 0.814751 | 1.31E-51 | -1.69E-46 |
MS.gene05984 | MS.gene22691 | 0.879429 | 1.25E-69 | -1.69E-46 |
MS.gene059894 | MS.gene22691 | 0.832615 | 8.55E-56 | -1.69E-46 |
MS.gene059899 | MS.gene22691 | 0.829753 | 4.31E-55 | -1.69E-46 |
MS.gene060084 | MS.gene22691 | 0.804292 | 2.32E-49 | -1.69E-46 |
MS.gene060297 | MS.gene22691 | 0.849994 | 2.26E-60 | -1.69E-46 |
MS.gene060407 | MS.gene22691 | 0.80214 | 6.46E-49 | -1.69E-46 |
MS.gene060572 | MS.gene22691 | 0.816423 | 5.57E-52 | -1.69E-46 |
MS.gene060683 | MS.gene22691 | 0.827096 | 1.89E-54 | -1.69E-46 |
MS.gene060685 | MS.gene22691 | 0.816838 | 4.50E-52 | -1.69E-46 |
MS.gene060803 | MS.gene22691 | 0.811663 | 6.26E-51 | -1.69E-46 |
MS.gene060879 | MS.gene22691 | 0.824558 | 7.56E-54 | -1.69E-46 |
MS.gene060994 | MS.gene22691 | 0.812188 | 4.81E-51 | -1.69E-46 |
MS.gene061000 | MS.gene22691 | 0.808464 | 3.06E-50 | -1.69E-46 |
MS.gene061040 | MS.gene22691 | -0.867637 | 1.18E-65 | -1.69E-46 |
MS.gene061049 | MS.gene22691 | 0.829735 | 4.36E-55 | -1.69E-46 |
MS.gene061114 | MS.gene22691 | -0.873986 | 9.61E-68 | -1.69E-46 |
MS.gene061159 | MS.gene22691 | 0.80478 | 1.83E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22691.t1 | MTR_7g117270 | 97.011 | 368 | 8 | 2 | 1 | 367 | 165 | 530 | 0.0 | 717 |
MS.gene22691.t1 | MTR_3g083350 | 42.735 | 234 | 124 | 3 | 15 | 246 | 160 | 385 | 6.77e-55 | 189 |
MS.gene22691.t1 | MTR_3g105530 | 33.929 | 336 | 179 | 8 | 1 | 319 | 115 | 424 | 4.70e-45 | 160 |
MS.gene22691.t1 | MTR_1g032040 | 39.184 | 245 | 138 | 5 | 11 | 252 | 127 | 363 | 1.13e-41 | 150 |
MS.gene22691.t1 | MTR_1g032380 | 39.184 | 245 | 138 | 5 | 11 | 252 | 127 | 363 | 1.13e-41 | 150 |
MS.gene22691.t1 | MTR_1g072550 | 39.754 | 244 | 136 | 5 | 11 | 251 | 127 | 362 | 1.73e-41 | 150 |
MS.gene22691.t1 | MTR_1g019170 | 35.458 | 251 | 141 | 5 | 1 | 247 | 97 | 330 | 5.02e-37 | 138 |
MS.gene22691.t1 | MTR_3g029990 | 35.458 | 251 | 141 | 5 | 1 | 247 | 97 | 330 | 3.97e-36 | 139 |
MS.gene22691.t1 | MTR_3g029990 | 35.458 | 251 | 141 | 5 | 1 | 247 | 97 | 330 | 4.03e-36 | 139 |
MS.gene22691.t1 | MTR_3g074730 | 37.548 | 261 | 144 | 6 | 1 | 253 | 136 | 385 | 1.05e-35 | 134 |
MS.gene22691.t1 | MTR_3g030020 | 32.281 | 285 | 170 | 6 | 1 | 279 | 54 | 321 | 1.97e-35 | 133 |
MS.gene22691.t1 | MTR_2g067960 | 32.641 | 337 | 182 | 12 | 23 | 334 | 114 | 430 | 2.78e-35 | 134 |
MS.gene22691.t1 | MTR_6g033595 | 32.827 | 329 | 176 | 12 | 23 | 326 | 149 | 457 | 3.57e-35 | 134 |
MS.gene22691.t1 | MTR_8g089370 | 32.576 | 264 | 169 | 3 | 1 | 262 | 120 | 376 | 1.28e-34 | 131 |
MS.gene22691.t1 | MTR_1g098960 | 34.661 | 251 | 143 | 5 | 1 | 247 | 99 | 332 | 6.83e-34 | 130 |
MS.gene22691.t1 | MTR_7g107280 | 29.968 | 317 | 204 | 5 | 1 | 306 | 111 | 420 | 3.74e-31 | 122 |
MS.gene22691.t1 | MTR_7g088530 | 32.422 | 256 | 164 | 3 | 1 | 255 | 125 | 372 | 4.21e-31 | 122 |
MS.gene22691.t1 | MTR_0153s0070 | 31.579 | 304 | 139 | 7 | 1 | 288 | 92 | 342 | 1.45e-29 | 117 |
MS.gene22691.t1 | MTR_0153s0070 | 33.772 | 228 | 121 | 5 | 1 | 212 | 122 | 335 | 2.73e-29 | 115 |
MS.gene22691.t1 | MTR_4g053720 | 30.522 | 249 | 147 | 5 | 1 | 235 | 102 | 338 | 2.08e-24 | 102 |
MS.gene22691.t1 | MTR_3g448960 | 30.588 | 255 | 131 | 6 | 1 | 251 | 99 | 311 | 6.42e-24 | 102 |
MS.gene22691.t1 | MTR_3g063230 | 25.478 | 314 | 197 | 7 | 1 | 296 | 131 | 425 | 1.18e-21 | 95.9 |
MS.gene22691.t1 | MTR_6g043850 | 27.103 | 214 | 147 | 1 | 23 | 236 | 132 | 336 | 2.98e-21 | 95.9 |
MS.gene22691.t1 | MTR_3g063230 | 29.508 | 183 | 109 | 4 | 123 | 296 | 230 | 401 | 2.45e-18 | 85.9 |
MS.gene22691.t1 | MTR_7g018630 | 27.413 | 259 | 166 | 4 | 1 | 251 | 131 | 375 | 3.16e-18 | 85.9 |
MS.gene22691.t1 | MTR_8g102038 | 28.718 | 195 | 113 | 5 | 1 | 181 | 56 | 238 | 3.98e-14 | 71.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22691.t1 | AT4G01037 | 63.660 | 377 | 122 | 6 | 1 | 367 | 157 | 528 | 7.44e-151 | 436 |
MS.gene22691.t1 | AT5G62990 | 44.141 | 256 | 126 | 5 | 1 | 251 | 149 | 392 | 1.25e-62 | 208 |
MS.gene22691.t1 | AT3G63090 | 40.000 | 245 | 136 | 6 | 11 | 252 | 130 | 366 | 7.40e-44 | 156 |
MS.gene22691.t1 | AT5G48040 | 33.333 | 306 | 187 | 6 | 1 | 305 | 122 | 411 | 1.37e-40 | 148 |
MS.gene22691.t1 | AT5G21970 | 32.911 | 316 | 167 | 7 | 1 | 307 | 134 | 413 | 1.63e-37 | 140 |
MS.gene22691.t1 | AT5G21970 | 32.911 | 316 | 167 | 7 | 1 | 307 | 134 | 413 | 1.63e-37 | 140 |
MS.gene22691.t1 | AT1G79120 | 31.418 | 261 | 166 | 2 | 1 | 251 | 138 | 395 | 8.69e-37 | 137 |
MS.gene22691.t1 | AT1G79120 | 31.418 | 261 | 166 | 2 | 1 | 251 | 138 | 395 | 8.69e-37 | 137 |
MS.gene22691.t1 | AT2G31290 | 32.677 | 254 | 152 | 4 | 1 | 251 | 104 | 341 | 5.21e-36 | 135 |
MS.gene22691.t1 | AT2G31290 | 32.677 | 254 | 152 | 4 | 1 | 251 | 104 | 341 | 5.21e-36 | 135 |
MS.gene22691.t1 | AT4G33495 | 32.847 | 274 | 161 | 7 | 14 | 270 | 134 | 401 | 7.94e-34 | 129 |
MS.gene22691.t1 | AT4G08940 | 37.255 | 255 | 148 | 6 | 1 | 253 | 144 | 388 | 2.28e-33 | 128 |
MS.gene22691.t1 | AT3G58520 | 31.365 | 271 | 173 | 3 | 1 | 263 | 102 | 367 | 2.50e-32 | 125 |
MS.gene22691.t1 | AT3G58520 | 31.518 | 257 | 163 | 3 | 15 | 263 | 128 | 379 | 4.94e-32 | 125 |
MS.gene22691.t1 | AT1G06440 | 32.941 | 255 | 156 | 7 | 21 | 265 | 135 | 384 | 2.60e-30 | 119 |
MS.gene22691.t1 | AT5G45790 | 30.255 | 314 | 192 | 6 | 1 | 314 | 62 | 348 | 4.97e-30 | 118 |
MS.gene22691.t1 | AT5G45790 | 30.255 | 314 | 192 | 6 | 1 | 314 | 147 | 433 | 1.88e-29 | 118 |
MS.gene22691.t1 | AT1G71850 | 27.931 | 290 | 185 | 6 | 26 | 312 | 137 | 405 | 1.42e-26 | 110 |
MS.gene22691.t1 | AT4G24320 | 30.657 | 274 | 168 | 7 | 1 | 264 | 103 | 364 | 4.14e-26 | 108 |
MS.gene22691.t1 | AT2G39120 | 27.165 | 254 | 173 | 3 | 1 | 251 | 111 | 355 | 8.69e-17 | 81.3 |
Find 81 sgRNAs with CRISPR-Local
Find 89 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGGCATTTGGCGAATGATTT+AGG | 0.190368 | 7.4:-1173318 | MS.gene22691:CDS |
AAAGAGATATAAAACATATC+AGG | 0.276380 | 7.4:+1172826 | None:intergenic |
TCAAGATTACCACCGTTCTC+TGG | 0.326785 | 7.4:+1172363 | None:intergenic |
TACTCAGATTTCTCTATGAT+TGG | 0.332939 | 7.4:-1173003 | MS.gene22691:CDS |
GTTAGAGAAAATTGGGCATT+TGG | 0.343668 | 7.4:-1173331 | MS.gene22691:CDS |
ACAGGGATTCTGTGTTCCTT+AGG | 0.353477 | 7.4:-1172795 | MS.gene22691:CDS |
TCTGAGTAAGGCGATATATA+AGG | 0.364252 | 7.4:+1173018 | None:intergenic |
CGTTCTCTGGGACGACCATC+AGG | 0.372597 | 7.4:+1172376 | None:intergenic |
AGCAGAATTTAATTATAGAT+AGG | 0.391261 | 7.4:-1173128 | MS.gene22691:CDS |
AGATAGAGATGGAGATGGGA+TGG | 0.396749 | 7.4:-1172653 | MS.gene22691:CDS |
ACCTCCTCGTCATCAAAATC+TGG | 0.414715 | 7.4:+1172487 | None:intergenic |
TTCGCGACACCATTTGTCAT+AGG | 0.422027 | 7.4:-1173281 | MS.gene22691:CDS |
AAAGTTGTTCAGACTGAAAG+AGG | 0.431002 | 7.4:-1173243 | MS.gene22691:CDS |
TGCACTTGAATTAACACATT+GGG | 0.442420 | 7.4:-1173217 | MS.gene22691:CDS |
AGCTTTATCTTGAAGAATTG+AGG | 0.442851 | 7.4:-1173431 | MS.gene22691:CDS |
GGACAGATTGTTACTTGTAA+AGG | 0.447014 | 7.4:-1172740 | MS.gene22691:CDS |
TTTGAAAGATTAAGACCCTT+AGG | 0.447819 | 7.4:+1173078 | None:intergenic |
ATATCTCTTTGAAAGGAGAC+AGG | 0.456034 | 7.4:-1172813 | MS.gene22691:CDS |
CAGGGATTCTGTGTTCCTTA+GGG | 0.456981 | 7.4:-1172794 | MS.gene22691:CDS |
CGACCGGCACCCCTACCCTT+AGG | 0.457781 | 7.4:+1172682 | None:intergenic |
TGATATTCCACGATTTCCTA+AGG | 0.460152 | 7.4:-1172698 | MS.gene22691:CDS |
ATCTTGAAGAATTGAGGGTT+AGG | 0.461053 | 7.4:-1173425 | MS.gene22691:CDS |
CTCTGGATACCTATGACAAA+TGG | 0.461089 | 7.4:+1173272 | None:intergenic |
AAGGGTCTTAATCTTTCAAA+AGG | 0.467749 | 7.4:-1173075 | MS.gene22691:CDS |
GCTTTATCTTGAAGAATTGA+GGG | 0.468992 | 7.4:-1173430 | MS.gene22691:CDS |
TCCACGATTTCCTAAGGGTA+GGG | 0.472983 | 7.4:-1172692 | MS.gene22691:CDS |
GATAGAGATGGAGATGGGAT+GGG | 0.477156 | 7.4:-1172652 | MS.gene22691:CDS |
AGCTTTACTCTATTAAACTT+AGG | 0.478690 | 7.4:+1173102 | None:intergenic |
TTTCCTAAGGGTAGGGGTGC+CGG | 0.484180 | 7.4:-1172685 | MS.gene22691:CDS |
GCAGAATTTAATTATAGATA+GGG | 0.485320 | 7.4:-1173127 | MS.gene22691:CDS |
CAAGATTACCACCGTTCTCT+GGG | 0.485705 | 7.4:+1172364 | None:intergenic |
TAATAGAGTAAAGCTTCCTA+AGG | 0.486104 | 7.4:-1173094 | MS.gene22691:CDS |
ATTGAGGGTTAGGAATGAAA+TGG | 0.486805 | 7.4:-1173415 | MS.gene22691:CDS |
CGCAAGACAGAATAATGAAA+AGG | 0.489822 | 7.4:-1172416 | MS.gene22691:CDS |
AATTGAGAGGGATGTTGATA+AGG | 0.491946 | 7.4:-1172852 | MS.gene22691:CDS |
ATCATAGAGAAATCTGAGTA+AGG | 0.496079 | 7.4:+1173006 | None:intergenic |
ATCTCTATCTCTAGTGCGAC+CGG | 0.501008 | 7.4:+1172666 | None:intergenic |
ATGTTGTTGTTACTAAGCTT+AGG | 0.506899 | 7.4:-1173389 | MS.gene22691:CDS |
CGATTCTCACAGCAATTGAG+AGG | 0.531952 | 7.4:-1172865 | MS.gene22691:CDS |
CAATGTGTTAATTCAAGTGC+AGG | 0.536567 | 7.4:+1173219 | None:intergenic |
CTTGTTCCATCATTCCCTGA+TGG | 0.538863 | 7.4:-1172391 | MS.gene22691:CDS |
GAAATTGTTGATGATGCCGT+TGG | 0.539200 | 7.4:-1173367 | MS.gene22691:CDS |
GGACGACCATCAGGGAATGA+TGG | 0.544132 | 7.4:+1172385 | None:intergenic |
AAGAGATATAAAACATATCA+GGG | 0.552458 | 7.4:+1172827 | None:intergenic |
GAAATTTAGAATGACTTCTG+AGG | 0.553098 | 7.4:-1173460 | None:intergenic |
TGCGGCCGAGCTGTCTGCGG+AGG | 0.560311 | 7.4:-1173175 | MS.gene22691:CDS |
CTGATGGTCGTCCCAGAGAA+CGG | 0.562404 | 7.4:-1172375 | MS.gene22691:CDS |
CCACGATTTCCTAAGGGTAG+GGG | 0.563389 | 7.4:-1172691 | MS.gene22691:CDS |
AGCTTATCGAGATTCTCAGT+TGG | 0.565019 | 7.4:-1172770 | MS.gene22691:CDS |
ACTAGAGATAGAGATGGAGA+TGG | 0.565748 | 7.4:-1172658 | MS.gene22691:CDS |
TTCTGCGGCCGAGCTGTCTG+CGG | 0.565854 | 7.4:-1173178 | MS.gene22691:CDS |
ACGATGATATCGATGATGAC+TGG | 0.572213 | 7.4:-1172534 | MS.gene22691:CDS |
GAATGATATTGATAGCAGAC+AGG | 0.573642 | 7.4:-1172626 | MS.gene22691:CDS |
CTGCACTTGAATTAACACAT+TGG | 0.577423 | 7.4:-1173218 | MS.gene22691:CDS |
GGAGAATCGAATTAGAGAAG+TGG | 0.581481 | 7.4:-1173154 | MS.gene22691:CDS |
ACAGGATGAAAGTGGTGAAG+AGG | 0.582031 | 7.4:-1172608 | MS.gene22691:CDS |
ATCTTTCAAAAGGTGAGATG+AGG | 0.582454 | 7.4:-1173065 | MS.gene22691:CDS |
TCCTCAGCTTGCAGTTTCTG+CGG | 0.583709 | 7.4:-1173193 | MS.gene22691:CDS |
GGTCGCACTAGAGATAGAGA+TGG | 0.588250 | 7.4:-1172664 | MS.gene22691:CDS |
CTAGAGATAGAGATGGAGAT+GGG | 0.591787 | 7.4:-1172657 | MS.gene22691:CDS |
GATAGCAGACAGGATGAAAG+TGG | 0.596310 | 7.4:-1172616 | MS.gene22691:CDS |
CCCCTACCCTTAGGAAATCG+TGG | 0.600344 | 7.4:+1172691 | None:intergenic |
GCCGCAGAAACTGCAAGCTG+AGG | 0.600466 | 7.4:+1173192 | None:intergenic |
GATTCTCACAGCAATTGAGA+GGG | 0.608241 | 7.4:-1172864 | MS.gene22691:CDS |
TATCTCTTTGAAAGGAGACA+GGG | 0.611518 | 7.4:-1172812 | MS.gene22691:CDS |
AATAGAGTAAAGCTTCCTAA+GGG | 0.615219 | 7.4:-1173093 | MS.gene22691:CDS |
ATTCTCCTCCGCAGACAGCT+CGG | 0.615702 | 7.4:+1173170 | None:intergenic |
AATCTCGATAAGCTTCCCTA+AGG | 0.627558 | 7.4:+1172779 | None:intergenic |
GATATTCCACGATTTCCTAA+GGG | 0.627966 | 7.4:-1172697 | MS.gene22691:CDS |
TCCTCGTCATCAAAATCTGG+TGG | 0.632166 | 7.4:+1172490 | None:intergenic |
GTGGTGAAGAGGAACAAGAA+TGG | 0.632592 | 7.4:-1172597 | MS.gene22691:CDS |
CATCAGGGAATGATGGAACA+AGG | 0.636284 | 7.4:+1172392 | None:intergenic |
AGATTCTCAGTTGGTAGACA+AGG | 0.639646 | 7.4:-1172761 | MS.gene22691:CDS |
TGATGATGCCGTTGGAAAAG+CGG | 0.641358 | 7.4:-1173359 | MS.gene22691:CDS |
GTTCTCTGGGACGACCATCA+GGG | 0.643365 | 7.4:+1172377 | None:intergenic |
TATGATTGGTTTGAACACGC+CGG | 0.658259 | 7.4:-1172989 | MS.gene22691:CDS |
TGACGAGGAGGTAGAAACAT+CGG | 0.661367 | 7.4:-1172476 | MS.gene22691:CDS |
GCTGATGATTTAATCAGCGA+TGG | 0.662081 | 7.4:-1172568 | MS.gene22691:CDS |
TTCCACGATTTCCTAAGGGT+AGG | 0.664321 | 7.4:-1172693 | MS.gene22691:CDS |
ATGGTGTCGCGAAATTCTCG+AGG | 0.669888 | 7.4:+1173291 | None:intergenic |
ATGGTCGTCCCAGAGAACGG+TGG | 0.738040 | 7.4:-1172372 | MS.gene22691:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAGAGATATAAAACATATC+AGG | + | chr7.4:1172996-1173015 | None:intergenic | 20.0% |
!! | AAGAGATATAAAACATATCA+GGG | + | chr7.4:1172995-1173014 | None:intergenic | 20.0% |
!! | AGCAGAATTTAATTATAGAT+AGG | - | chr7.4:1172691-1172710 | MS.gene22691:CDS | 20.0% |
!! | GCAGAATTTAATTATAGATA+GGG | - | chr7.4:1172692-1172711 | MS.gene22691:CDS | 20.0% |
!!! | ATGTTTTATATCTCTTTGAA+AGG | - | chr7.4:1172999-1173018 | MS.gene22691:CDS | 20.0% |
! | AGCTTTACTCTATTAAACTT+AGG | + | chr7.4:1172720-1172739 | None:intergenic | 25.0% |
!! | GGATTTTGTTAGAGAAAATT+GGG | - | chr7.4:1172481-1172500 | MS.gene22691:CDS | 25.0% |
!! | TGAACAACTTTAAAAAACTC+TGG | + | chr7.4:1172567-1172586 | None:intergenic | 25.0% |
AAGGGTCTTAATCTTTCAAA+AGG | - | chr7.4:1172744-1172763 | MS.gene22691:CDS | 30.0% | |
AATAGAGTAAAGCTTCCTAA+GGG | - | chr7.4:1172726-1172745 | MS.gene22691:CDS | 30.0% | |
ATCATAGAGAAATCTGAGTA+AGG | + | chr7.4:1172816-1172835 | None:intergenic | 30.0% | |
GCTTTATCTTGAAGAATTGA+GGG | - | chr7.4:1172389-1172408 | MS.gene22691:CDS | 30.0% | |
TAATAGAGTAAAGCTTCCTA+AGG | - | chr7.4:1172725-1172744 | MS.gene22691:CDS | 30.0% | |
TACTCAGATTTCTCTATGAT+TGG | - | chr7.4:1172816-1172835 | MS.gene22691:CDS | 30.0% | |
TGCACTTGAATTAACACATT+GGG | - | chr7.4:1172602-1172621 | MS.gene22691:CDS | 30.0% | |
TTTGAAAGATTAAGACCCTT+AGG | + | chr7.4:1172744-1172763 | None:intergenic | 30.0% | |
! | AGCTTTATCTTGAAGAATTG+AGG | - | chr7.4:1172388-1172407 | MS.gene22691:CDS | 30.0% |
! | ATGTTGTTGTTACTAAGCTT+AGG | - | chr7.4:1172430-1172449 | MS.gene22691:CDS | 30.0% |
! | CGGATTTTGTTAGAGAAAAT+TGG | - | chr7.4:1172480-1172499 | MS.gene22691:CDS | 30.0% |
AAAGGAAAAACTTCGTTCGT+TGG | - | chr7.4:1173097-1173116 | MS.gene22691:CDS | 35.0% | |
AAAGTTGTTCAGACTGAAAG+AGG | - | chr7.4:1172576-1172595 | MS.gene22691:CDS | 35.0% | |
AATTGAGAGGGATGTTGATA+AGG | - | chr7.4:1172967-1172986 | MS.gene22691:CDS | 35.0% | |
ATCTTGAAGAATTGAGGGTT+AGG | - | chr7.4:1172394-1172413 | MS.gene22691:CDS | 35.0% | |
ATCTTTCAAAAGGTGAGATG+AGG | - | chr7.4:1172754-1172773 | MS.gene22691:CDS | 35.0% | |
ATTGAGGGTTAGGAATGAAA+TGG | - | chr7.4:1172404-1172423 | MS.gene22691:CDS | 35.0% | |
CAATGTGTTAATTCAAGTGC+AGG | + | chr7.4:1172603-1172622 | None:intergenic | 35.0% | |
CGCAAGACAGAATAATGAAA+AGG | - | chr7.4:1173403-1173422 | MS.gene22691:CDS | 35.0% | |
CTGCACTTGAATTAACACAT+TGG | - | chr7.4:1172601-1172620 | MS.gene22691:CDS | 35.0% | |
GATATTCCACGATTTCCTAA+GGG | - | chr7.4:1173122-1173141 | MS.gene22691:CDS | 35.0% | |
GTTAGAGAAAATTGGGCATT+TGG | - | chr7.4:1172488-1172507 | MS.gene22691:CDS | 35.0% | |
TCTGAGTAAGGCGATATATA+AGG | + | chr7.4:1172804-1172823 | None:intergenic | 35.0% | |
TGATATTCCACGATTTCCTA+AGG | - | chr7.4:1173121-1173140 | MS.gene22691:CDS | 35.0% | |
! | ATATCTCTTTGAAAGGAGAC+AGG | - | chr7.4:1173006-1173025 | MS.gene22691:CDS | 35.0% |
! | GAATGATATTGATAGCAGAC+AGG | - | chr7.4:1173193-1173212 | MS.gene22691:CDS | 35.0% |
! | GGACAGATTGTTACTTGTAA+AGG | - | chr7.4:1173079-1173098 | MS.gene22691:CDS | 35.0% |
! | TATCTCTTTGAAAGGAGACA+GGG | - | chr7.4:1173007-1173026 | MS.gene22691:CDS | 35.0% |
!! | AACAAAATCCGCTTTTCCAA+CGG | + | chr7.4:1172471-1172490 | None:intergenic | 35.0% |
!! | TAACTTCACTCATTTTCGAG+AGG | - | chr7.4:1172926-1172945 | MS.gene22691:CDS | 35.0% |
AATCTCGATAAGCTTCCCTA+AGG | + | chr7.4:1173043-1173062 | None:intergenic | 40.0% | |
ACGATGATATCGATGATGAC+TGG | - | chr7.4:1173285-1173304 | MS.gene22691:CDS | 40.0% | |
ACTAGAGATAGAGATGGAGA+TGG | - | chr7.4:1173161-1173180 | MS.gene22691:CDS | 40.0% | |
AGCTTATCGAGATTCTCAGT+TGG | - | chr7.4:1173049-1173068 | MS.gene22691:CDS | 40.0% | |
CTAGAGATAGAGATGGAGAT+GGG | - | chr7.4:1173162-1173181 | MS.gene22691:CDS | 40.0% | |
CTCTGGATACCTATGACAAA+TGG | + | chr7.4:1172550-1172569 | None:intergenic | 40.0% | |
GATTCTCACAGCAATTGAGA+GGG | - | chr7.4:1172955-1172974 | MS.gene22691:CDS | 40.0% | |
GCTGATGATTTAATCAGCGA+TGG | - | chr7.4:1173251-1173270 | MS.gene22691:CDS | 40.0% | |
GGAGAATCGAATTAGAGAAG+TGG | - | chr7.4:1172665-1172684 | MS.gene22691:CDS | 40.0% | |
! | CAAGCATGCTTCTCTTTTTC+CGG | + | chr7.4:1172852-1172871 | None:intergenic | 40.0% |
! | GAAAAAGAGAAGCATGCTTG+TGG | - | chr7.4:1172852-1172871 | MS.gene22691:CDS | 40.0% |
!! | AGATTCTCAGTTGGTAGACA+AGG | - | chr7.4:1173058-1173077 | MS.gene22691:CDS | 40.0% |
!! | GAAATTGTTGATGATGCCGT+TGG | - | chr7.4:1172452-1172471 | MS.gene22691:CDS | 40.0% |
!! | TATGATTGGTTTGAACACGC+CGG | - | chr7.4:1172830-1172849 | MS.gene22691:CDS | 40.0% |
ACAGGATGAAAGTGGTGAAG+AGG | - | chr7.4:1173211-1173230 | MS.gene22691:CDS | 45.0% | |
ACAGGGATTCTGTGTTCCTT+AGG | - | chr7.4:1173024-1173043 | MS.gene22691:CDS | 45.0% | |
ACCTCCTCGTCATCAAAATC+TGG | + | chr7.4:1173335-1173354 | None:intergenic | 45.0% | |
AGATAGAGATGGAGATGGGA+TGG | - | chr7.4:1173166-1173185 | MS.gene22691:CDS | 45.0% | |
ATCTCTATCTCTAGTGCGAC+CGG | + | chr7.4:1173156-1173175 | None:intergenic | 45.0% | |
CAGGGATTCTGTGTTCCTTA+GGG | - | chr7.4:1173025-1173044 | MS.gene22691:CDS | 45.0% | |
CGATTCTCACAGCAATTGAG+AGG | - | chr7.4:1172954-1172973 | MS.gene22691:CDS | 45.0% | |
CTTGTTCCATCATTCCCTGA+TGG | - | chr7.4:1173428-1173447 | MS.gene22691:CDS | 45.0% | |
GATAGAGATGGAGATGGGAT+GGG | - | chr7.4:1173167-1173186 | MS.gene22691:CDS | 45.0% | |
GATAGCAGACAGGATGAAAG+TGG | - | chr7.4:1173203-1173222 | MS.gene22691:CDS | 45.0% | |
GGGCATTTGGCGAATGATTT+AGG | - | chr7.4:1172501-1172520 | MS.gene22691:CDS | 45.0% | |
GTGGTGAAGAGGAACAAGAA+TGG | - | chr7.4:1173222-1173241 | MS.gene22691:CDS | 45.0% | |
TCCACGATTTCCTAAGGGTA+GGG | - | chr7.4:1173127-1173146 | MS.gene22691:CDS | 45.0% | |
TCCTCGTCATCAAAATCTGG+TGG | + | chr7.4:1173332-1173351 | None:intergenic | 45.0% | |
TGACGAGGAGGTAGAAACAT+CGG | - | chr7.4:1173343-1173362 | MS.gene22691:CDS | 45.0% | |
TTCCACGATTTCCTAAGGGT+AGG | - | chr7.4:1173126-1173145 | MS.gene22691:CDS | 45.0% | |
TTCGCGACACCATTTGTCAT+AGG | - | chr7.4:1172538-1172557 | MS.gene22691:CDS | 45.0% | |
! | CATCAGGGAATGATGGAACA+AGG | + | chr7.4:1173430-1173449 | None:intergenic | 45.0% |
! | TGATGATGCCGTTGGAAAAG+CGG | - | chr7.4:1172460-1172479 | MS.gene22691:CDS | 45.0% |
!!! | ACCACCAGATTTTGATGACG+AGG | - | chr7.4:1173328-1173347 | MS.gene22691:CDS | 45.0% |
!!! | ACCAGATTTTGATGACGAGG+AGG | - | chr7.4:1173331-1173350 | MS.gene22691:CDS | 45.0% |
CCACGATTTCCTAAGGGTAG+GGG | - | chr7.4:1173128-1173147 | MS.gene22691:CDS | 50.0% | |
GGTCGCACTAGAGATAGAGA+TGG | - | chr7.4:1173155-1173174 | MS.gene22691:CDS | 50.0% | |
TCCTCAGCTTGCAGTTTCTG+CGG | - | chr7.4:1172626-1172645 | MS.gene22691:CDS | 50.0% | |
!! | ATGGTGTCGCGAAATTCTCG+AGG | + | chr7.4:1172531-1172550 | None:intergenic | 50.0% |
ATTCTCCTCCGCAGACAGCT+CGG | + | chr7.4:1172652-1172671 | None:intergenic | 55.0% | |
CCCCTACCCTTAGGAAATCG+TGG | + | chr7.4:1173131-1173150 | None:intergenic | 55.0% | |
CTGATGGTCGTCCCAGAGAA+CGG | - | chr7.4:1173444-1173463 | MS.gene22691:CDS | 55.0% | |
GGACGACCATCAGGGAATGA+TGG | + | chr7.4:1173437-1173456 | None:intergenic | 55.0% | |
! | TTTCCTAAGGGTAGGGGTGC+CGG | - | chr7.4:1173134-1173153 | MS.gene22691:CDS | 55.0% |
!! | GTTCTCTGGGACGACCATCA+GGG | + | chr7.4:1173445-1173464 | None:intergenic | 55.0% |
ATGGTCGTCCCAGAGAACGG+TGG | - | chr7.4:1173447-1173466 | MS.gene22691:CDS | 60.0% | |
GCCGCAGAAACTGCAAGCTG+AGG | + | chr7.4:1172630-1172649 | None:intergenic | 60.0% | |
!! | CGTTCTCTGGGACGACCATC+AGG | + | chr7.4:1173446-1173465 | None:intergenic | 60.0% |
TTCTGCGGCCGAGCTGTCTG+CGG | - | chr7.4:1172641-1172660 | MS.gene22691:CDS | 65.0% | |
CGACCGGCACCCCTACCCTT+AGG | + | chr7.4:1173140-1173159 | None:intergenic | 70.0% | |
TGCGGCCGAGCTGTCTGCGG+AGG | - | chr7.4:1172644-1172663 | MS.gene22691:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 1172369 | 1173472 | 1172369 | ID=MS.gene22691 |
chr7.4 | mRNA | 1172369 | 1173472 | 1172369 | ID=MS.gene22691.t1;Parent=MS.gene22691 |
chr7.4 | exon | 1172369 | 1173472 | 1172369 | ID=MS.gene22691.t1.exon1;Parent=MS.gene22691.t1 |
chr7.4 | CDS | 1172369 | 1173472 | 1172369 | ID=cds.MS.gene22691.t1;Parent=MS.gene22691.t1 |
Gene Sequence |
Protein sequence |