Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28313.t1 | XP_003606834.1 | 91.8 | 583 | 42 | 2 | 1 | 583 | 1 | 577 | 2.30E-303 | 1050.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28313.t1 | P21885 | 36.6 | 489 | 298 | 4 | 94 | 578 | 7 | 487 | 3.6e-87 | 323.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28313.t1 | G7JEX3 | 91.8 | 583 | 42 | 2 | 1 | 583 | 1 | 577 | 1.7e-303 | 1050.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene28313 | 0.813327 | 2.71E-51 | -1.69E-46 |
| MS.gene049171 | MS.gene28313 | 0.872297 | 3.54E-67 | -1.69E-46 |
| MS.gene049173 | MS.gene28313 | 0.820597 | 6.31E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene28313 | 0.831736 | 1.41E-55 | -1.69E-46 |
| MS.gene049222 | MS.gene28313 | 0.866367 | 3.00E-65 | -1.69E-46 |
| MS.gene049232 | MS.gene28313 | 0.800954 | 1.13E-48 | -1.69E-46 |
| MS.gene049285 | MS.gene28313 | 0.855165 | 7.58E-62 | -1.69E-46 |
| MS.gene049320 | MS.gene28313 | 0.837858 | 4.05E-57 | -1.69E-46 |
| MS.gene049609 | MS.gene28313 | 0.821476 | 3.96E-53 | -1.69E-46 |
| MS.gene049627 | MS.gene28313 | 0.868359 | 6.92E-66 | -1.69E-46 |
| MS.gene049633 | MS.gene28313 | 0.828278 | 9.83E-55 | -1.69E-46 |
| MS.gene049865 | MS.gene28313 | 0.822762 | 1.99E-53 | -1.69E-46 |
| MS.gene05010 | MS.gene28313 | 0.828617 | 8.14E-55 | -1.69E-46 |
| MS.gene050163 | MS.gene28313 | 0.842977 | 1.86E-58 | -1.69E-46 |
| MS.gene050165 | MS.gene28313 | 0.829022 | 6.49E-55 | -1.69E-46 |
| MS.gene050170 | MS.gene28313 | 0.817857 | 2.65E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene28313 | 0.811381 | 7.20E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene28313 | 0.868538 | 6.06E-66 | -1.69E-46 |
| MS.gene050518 | MS.gene28313 | 0.84557 | 3.74E-59 | -1.69E-46 |
| MS.gene050538 | MS.gene28313 | 0.812543 | 4.02E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene28313 | 0.878333 | 3.06E-69 | -1.69E-46 |
| MS.gene050612 | MS.gene28313 | 0.825289 | 5.08E-54 | -1.69E-46 |
| MS.gene050675 | MS.gene28313 | 0.813307 | 2.74E-51 | -1.69E-46 |
| MS.gene050699 | MS.gene28313 | 0.844004 | 9.89E-59 | -1.69E-46 |
| MS.gene050747 | MS.gene28313 | 0.85789 | 1.20E-62 | -1.69E-46 |
| MS.gene050772 | MS.gene28313 | 0.844263 | 8.42E-59 | -1.69E-46 |
| MS.gene05080 | MS.gene28313 | 0.818566 | 1.83E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene28313 | 0.816485 | 5.40E-52 | -1.69E-46 |
| MS.gene050871 | MS.gene28313 | 0.813947 | 1.98E-51 | -1.69E-46 |
| MS.gene050876 | MS.gene28313 | 0.809569 | 1.77E-50 | -1.69E-46 |
| MS.gene050904 | MS.gene28313 | 0.826032 | 3.39E-54 | -1.69E-46 |
| MS.gene050950 | MS.gene28313 | 0.850253 | 1.91E-60 | -1.69E-46 |
| MS.gene050986 | MS.gene28313 | 0.812603 | 3.90E-51 | -1.69E-46 |
| MS.gene05100 | MS.gene28313 | 0.846145 | 2.61E-59 | -1.69E-46 |
| MS.gene051317 | MS.gene28313 | 0.800508 | 1.39E-48 | -1.69E-46 |
| MS.gene051551 | MS.gene28313 | 0.801597 | 8.35E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene28313 | 0.829265 | 5.67E-55 | -1.69E-46 |
| MS.gene051694 | MS.gene28313 | 0.850782 | 1.36E-60 | -1.69E-46 |
| MS.gene051838 | MS.gene28313 | 0.814277 | 1.67E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene28313 | 0.821919 | 3.13E-53 | -1.69E-46 |
| MS.gene051949 | MS.gene28313 | 0.806918 | 6.51E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene28313 | 0.863034 | 3.32E-64 | -1.69E-46 |
| MS.gene052482 | MS.gene28313 | 0.844978 | 5.41E-59 | -1.69E-46 |
| MS.gene052486 | MS.gene28313 | 0.854533 | 1.16E-61 | -1.69E-46 |
| MS.gene052501 | MS.gene28313 | 0.806925 | 6.49E-50 | -1.69E-46 |
| MS.gene052503 | MS.gene28313 | 0.850869 | 1.28E-60 | -1.69E-46 |
| MS.gene052506 | MS.gene28313 | 0.806423 | 8.29E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene28313 | 0.800764 | 1.24E-48 | -1.69E-46 |
| MS.gene052822 | MS.gene28313 | 0.80599 | 1.02E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene28313 | 0.846404 | 2.22E-59 | -1.69E-46 |
| MS.gene052825 | MS.gene28313 | 0.847264 | 1.29E-59 | -1.69E-46 |
| MS.gene052966 | MS.gene28313 | 0.815604 | 8.49E-52 | -1.69E-46 |
| MS.gene053203 | MS.gene28313 | 0.853597 | 2.15E-61 | -1.69E-46 |
| MS.gene053207 | MS.gene28313 | 0.815938 | 7.15E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene28313 | 0.854658 | 1.06E-61 | -1.69E-46 |
| MS.gene053286 | MS.gene28313 | 0.850472 | 1.66E-60 | -1.69E-46 |
| MS.gene053436 | MS.gene28313 | 0.833053 | 6.65E-56 | -1.69E-46 |
| MS.gene053480 | MS.gene28313 | 0.817596 | 3.04E-52 | -1.69E-46 |
| MS.gene053549 | MS.gene28313 | -0.823741 | 1.18E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene28313 | 0.835176 | 1.95E-56 | -1.69E-46 |
| MS.gene053626 | MS.gene28313 | 0.810531 | 1.10E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene28313 | 0.830972 | 2.17E-55 | -1.69E-46 |
| MS.gene053824 | MS.gene28313 | 0.85565 | 5.47E-62 | -1.69E-46 |
| MS.gene054408 | MS.gene28313 | 0.820597 | 6.31E-53 | -1.69E-46 |
| MS.gene054595 | MS.gene28313 | 0.81523 | 1.03E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene28313 | 0.844603 | 6.82E-59 | -1.69E-46 |
| MS.gene054642 | MS.gene28313 | 0.842576 | 2.38E-58 | -1.69E-46 |
| MS.gene05470 | MS.gene28313 | 0.85449 | 1.19E-61 | -1.69E-46 |
| MS.gene054927 | MS.gene28313 | 0.84023 | 9.86E-58 | -1.69E-46 |
| MS.gene054954 | MS.gene28313 | 0.832473 | 9.27E-56 | -1.69E-46 |
| MS.gene055206 | MS.gene28313 | 0.816616 | 5.04E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene28313 | 0.861097 | 1.30E-63 | -1.69E-46 |
| MS.gene055502 | MS.gene28313 | 0.856582 | 2.92E-62 | -1.69E-46 |
| MS.gene055577 | MS.gene28313 | 0.886954 | 2.18E-72 | -1.69E-46 |
| MS.gene055722 | MS.gene28313 | 0.827493 | 1.52E-54 | -1.69E-46 |
| MS.gene055748 | MS.gene28313 | 0.82831 | 9.65E-55 | -1.69E-46 |
| MS.gene055750 | MS.gene28313 | 0.836365 | 9.77E-57 | -1.69E-46 |
| MS.gene055751 | MS.gene28313 | 0.827684 | 1.37E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene28313 | 0.835154 | 1.98E-56 | -1.69E-46 |
| MS.gene055941 | MS.gene28313 | 0.833305 | 5.75E-56 | -1.69E-46 |
| MS.gene056083 | MS.gene28313 | 0.812027 | 5.21E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene28313 | 0.823728 | 1.18E-53 | -1.69E-46 |
| MS.gene056409 | MS.gene28313 | 0.925062 | 3.05E-90 | -1.69E-46 |
| MS.gene056449 | MS.gene28313 | 0.807155 | 5.80E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene28313 | 0.845718 | 3.41E-59 | -1.69E-46 |
| MS.gene056510 | MS.gene28313 | 0.836365 | 9.77E-57 | -1.69E-46 |
| MS.gene056550 | MS.gene28313 | -0.806 | 1.02E-49 | -1.69E-46 |
| MS.gene056610 | MS.gene28313 | 0.943782 | 6.46E-103 | -1.69E-46 |
| MS.gene056657 | MS.gene28313 | 0.830314 | 3.15E-55 | -1.69E-46 |
| MS.gene056692 | MS.gene28313 | 0.862671 | 4.30E-64 | -1.69E-46 |
| MS.gene057416 | MS.gene28313 | 0.817452 | 3.27E-52 | -1.69E-46 |
| MS.gene057658 | MS.gene28313 | 0.854123 | 1.52E-61 | -1.69E-46 |
| MS.gene057831 | MS.gene28313 | 0.849856 | 2.47E-60 | -1.69E-46 |
| MS.gene058338 | MS.gene28313 | 0.839218 | 1.81E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene28313 | 0.841051 | 6.01E-58 | -1.69E-46 |
| MS.gene058419 | MS.gene28313 | 0.852678 | 3.94E-61 | -1.69E-46 |
| MS.gene058544 | MS.gene28313 | 0.853036 | 3.12E-61 | -1.69E-46 |
| MS.gene058773 | MS.gene28313 | 0.846259 | 2.43E-59 | -1.69E-46 |
| MS.gene058838 | MS.gene28313 | 0.84916 | 3.86E-60 | -1.69E-46 |
| MS.gene05883 | MS.gene28313 | 0.808115 | 3.63E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene28313 | 0.856195 | 3.79E-62 | -1.69E-46 |
| MS.gene059023 | MS.gene28313 | 0.883352 | 4.82E-71 | -1.69E-46 |
| MS.gene05912 | MS.gene28313 | 0.808177 | 3.52E-50 | -1.69E-46 |
| MS.gene05914 | MS.gene28313 | 0.805011 | 1.64E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene28313 | 0.824001 | 1.02E-53 | -1.69E-46 |
| MS.gene059677 | MS.gene28313 | 0.851232 | 1.02E-60 | -1.69E-46 |
| MS.gene059718 | MS.gene28313 | 0.856636 | 2.81E-62 | -1.69E-46 |
| MS.gene059756 | MS.gene28313 | 0.844739 | 6.28E-59 | -1.69E-46 |
| MS.gene059801 | MS.gene28313 | 0.865141 | 7.32E-65 | -1.69E-46 |
| MS.gene059837 | MS.gene28313 | 0.81651 | 5.33E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene28313 | 0.813926 | 2.00E-51 | -1.69E-46 |
| MS.gene059902 | MS.gene28313 | 0.824443 | 8.05E-54 | -1.69E-46 |
| MS.gene06000 | MS.gene28313 | 0.800334 | 1.51E-48 | -1.69E-46 |
| MS.gene060482 | MS.gene28313 | 0.80369 | 3.09E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene28313 | -0.810844 | 9.42E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene28313 | 0.845874 | 3.09E-59 | -1.69E-46 |
| MS.gene060762 | MS.gene28313 | 0.85669 | 2.71E-62 | -1.69E-46 |
| MS.gene06077 | MS.gene28313 | 0.887097 | 1.92E-72 | -1.69E-46 |
| MS.gene06092 | MS.gene28313 | 0.861094 | 1.31E-63 | -1.69E-46 |
| MS.gene060982 | MS.gene28313 | 0.840091 | 1.07E-57 | -1.69E-46 |
| MS.gene061150 | MS.gene28313 | 0.875219 | 3.66E-68 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28313.t1 | MTR_4g068230 | 94.523 | 566 | 26 | 1 | 18 | 583 | 17 | 577 | 0.0 | 1090 |
| MS.gene28313.t1 | MTR_4g068240 | 81.109 | 577 | 81 | 3 | 1 | 576 | 44 | 593 | 0.0 | 927 |
| MS.gene28313.t1 | MTR_4g068270 | 85.714 | 525 | 75 | 0 | 52 | 576 | 3 | 527 | 0.0 | 922 |
| MS.gene28313.t1 | MTR_5g096240 | 71.622 | 74 | 21 | 0 | 327 | 400 | 1 | 74 | 1.21e-28 | 108 |
| MS.gene28313.t1 | MTR_4g117010 | 70.270 | 74 | 22 | 0 | 327 | 400 | 1 | 74 | 3.78e-26 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 142 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTGTTTGTGCTTCTAATA+TGG | 0.174686 | 4.4:+38984963 | None:intergenic |
| GAGAGCATTGGTAAGGTTTC+GGG | 0.190923 | 4.4:-38983621 | MS.gene28313:CDS |
| GTCCTTACAAATTGAATTTC+AGG | 0.203917 | 4.4:-38986996 | MS.gene28313:CDS |
| CTTTGATGATCCAAACAATT+TGG | 0.249297 | 4.4:+38984936 | None:intergenic |
| CTCTCGTATTTCCCATATTC+TGG | 0.251716 | 4.4:+38985249 | None:intergenic |
| TCCTCGAAATTGTCATTTAT+CGG | 0.257328 | 4.4:-38984830 | MS.gene28313:CDS |
| AGCATTGCACTGCCAGAATA+TGG | 0.262779 | 4.4:-38985261 | MS.gene28313:CDS |
| TGCTTCTAATATGGGTCCTT+GGG | 0.268218 | 4.4:+38984972 | None:intergenic |
| GCTTGGTTGAATACAGTATC+AGG | 0.268880 | 4.4:+38984056 | None:intergenic |
| GACTTGTGGTTTGGAGAGTT+TGG | 0.285707 | 4.4:+38984135 | None:intergenic |
| TTCCTTCCAATTCGAGTTCC+TGG | 0.285931 | 4.4:+38984441 | None:intergenic |
| CTGTTAGATCAGCCCCTTGC+TGG | 0.315011 | 4.4:+38984255 | None:intergenic |
| TTGTCATTTATCGGCTATAT+CGG | 0.328484 | 4.4:-38984821 | MS.gene28313:CDS |
| AAGTCCTAGTTACCTGCTTT+TGG | 0.329378 | 4.4:-38984117 | MS.gene28313:CDS |
| TGGTGAACTGCTGCATTCAT+TGG | 0.330055 | 4.4:+38985188 | None:intergenic |
| ATCACTTATGCACTTAATCT+TGG | 0.331813 | 4.4:-38983825 | MS.gene28313:CDS |
| TCTGTTTGTGCTTCTAATAT+GGG | 0.332552 | 4.4:+38984964 | None:intergenic |
| GAAATCTTATATCGGGATTT+CGG | 0.334553 | 4.4:-38983879 | MS.gene28313:CDS |
| GTGCTTCTAATATGGGTCCT+TGG | 0.338955 | 4.4:+38984971 | None:intergenic |
| GGAGAGCATTGGTAAGGTTT+CGG | 0.339213 | 4.4:-38983622 | MS.gene28313:CDS |
| TGGTGGTGTCACTCCATTAC+AGG | 0.339936 | 4.4:-38984731 | MS.gene28313:intron |
| GGTGAACTGCTGCATTCATT+GGG | 0.340579 | 4.4:+38985189 | None:intergenic |
| CAGAAGAGGTTGTCAAGTTC+AGG | 0.367195 | 4.4:+38984997 | None:intergenic |
| ACAGGTATACCTGGAGGATA+TGG | 0.369128 | 4.4:+38983585 | None:intergenic |
| TGGGATCCAGGCAGCAATAA+TGG | 0.370354 | 4.4:-38984884 | MS.gene28313:CDS |
| ACAGAAGCAGCCAAATTGTT+TGG | 0.373346 | 4.4:-38984946 | MS.gene28313:CDS |
| GTCCTGAAATTCAATTTGTA+AGG | 0.380572 | 4.4:+38986994 | None:intergenic |
| AAGAAATTCTCCTGGTGAAC+AGG | 0.381246 | 4.4:+38984858 | None:intergenic |
| TCAGTAAGTACTCCGTCTTT+AGG | 0.381290 | 4.4:+38983726 | None:intergenic |
| TGCTATCCAGGAACTCGAAT+TGG | 0.387817 | 4.4:-38984447 | MS.gene28313:CDS |
| CACTTAATCTTGGAACTTGT+AGG | 0.388613 | 4.4:-38983815 | MS.gene28313:CDS |
| GCAGGTATTGAGTGCTATCC+AGG | 0.393137 | 4.4:-38984459 | MS.gene28313:intron |
| TAAAAGAAAAGTAACGATAA+AGG | 0.393781 | 4.4:-38983643 | MS.gene28313:CDS |
| GGTAACTAGGACTTGTGGTT+TGG | 0.402917 | 4.4:+38984126 | None:intergenic |
| CTAGCTCAGCCCTCCAGCAA+GGG | 0.409492 | 4.4:-38984268 | MS.gene28313:CDS |
| CCTTGCTGGAGGGCTGAGCT+AGG | 0.410613 | 4.4:+38984269 | None:intergenic |
| TTATTCCCGATAAAAGCCTT+TGG | 0.411005 | 4.4:+38983784 | None:intergenic |
| TTGTCGGAGGTACTACTTGT+GGG | 0.411563 | 4.4:-38984903 | MS.gene28313:CDS |
| GCCTCGATGACTCGACTCAT+TGG | 0.419230 | 4.4:-38985054 | MS.gene28313:CDS |
| GACAACTATAGAAGAAAGTA+AGG | 0.423013 | 4.4:+38983470 | None:intergenic |
| CAGCACCTTCACTTCTTACA+TGG | 0.424209 | 4.4:+38983514 | None:intergenic |
| AAGCGGATGAAATCTTATAT+CGG | 0.425695 | 4.4:-38983887 | MS.gene28313:CDS |
| AGCCGCAATGGATCAATTGC+AGG | 0.428507 | 4.4:+38983948 | None:intergenic |
| AATAACTGAATCACCTGTAA+TGG | 0.429007 | 4.4:+38984718 | None:intergenic |
| ATCACTTCACCTACTTATCA+TGG | 0.430365 | 4.4:-38984398 | MS.gene28313:CDS |
| TGGGAAGGTGAAAACCGTTT+CGG | 0.443193 | 4.4:+38987110 | None:intergenic |
| CATTTGCTAATTTAATCGCT+TGG | 0.448024 | 4.4:+38984039 | None:intergenic |
| AGGCCACTCTGCTGAAGCTC+TGG | 0.449434 | 4.4:+38985168 | None:intergenic |
| GAATTGTTTGTGAACTCGTT+GGG | 0.450040 | 4.4:-38983857 | MS.gene28313:CDS |
| CTCTCAGTAATAACCTCACC+GGG | 0.450163 | 4.4:+38983555 | None:intergenic |
| AGGTACTACTTGTGGGATCC+AGG | 0.450761 | 4.4:-38984896 | MS.gene28313:CDS |
| TTTATCAATTATTATGAGAC+CGG | 0.454597 | 4.4:+38983426 | None:intergenic |
| TCATCTATGCTGCACATGTC+AGG | 0.461997 | 4.4:-38984194 | MS.gene28313:CDS |
| TTCTCAAGCACTGAGATGCC+AGG | 0.468757 | 4.4:+38983990 | None:intergenic |
| GTTGAGATCTAGCAGCATCT+AGG | 0.468914 | 4.4:+38984090 | None:intergenic |
| ACCTCACCGGGGATCAATAC+AGG | 0.471875 | 4.4:+38983567 | None:intergenic |
| ATGGGAAATACGAGAGCGTT+GGG | 0.472269 | 4.4:-38985242 | MS.gene28313:CDS |
| GAAGCTCACGGTGCACATCT+AGG | 0.481340 | 4.4:-38984308 | MS.gene28313:CDS |
| AGCGGATGAAATCTTATATC+GGG | 0.486805 | 4.4:-38983886 | MS.gene28313:CDS |
| AGTGAAGGTGCTGATATTAG+TGG | 0.488793 | 4.4:-38983504 | MS.gene28313:CDS |
| CAATGGATCAATTGCAGGAA+TGG | 0.490219 | 4.4:+38983953 | None:intergenic |
| GCCGATAAATGACAATTTCG+AGG | 0.493005 | 4.4:+38984829 | None:intergenic |
| TTGAGATCTAGCAGCATCTA+GGG | 0.495500 | 4.4:+38984091 | None:intergenic |
| TTAGATCAGCCCCTTGCTGG+AGG | 0.497118 | 4.4:+38984258 | None:intergenic |
| CCGATAAAAGCCTTTGGACA+TGG | 0.500427 | 4.4:+38983790 | None:intergenic |
| CCTAGCTCAGCCCTCCAGCA+AGG | 0.500862 | 4.4:-38984269 | MS.gene28313:CDS |
| GCATTGCACTGCCAGAATAT+GGG | 0.501046 | 4.4:-38985260 | MS.gene28313:CDS |
| TCAAAGACATGGTTTCTTGT+CGG | 0.502260 | 4.4:-38984919 | MS.gene28313:CDS |
| GCTCGTGATTATATCATCAA+AGG | 0.513244 | 4.4:+38983695 | None:intergenic |
| TCGGGTAAATCATGAGCATA+TGG | 0.513396 | 4.4:+38985024 | None:intergenic |
| ATGAGTCGAGTCATCGAGGC+AGG | 0.515945 | 4.4:+38985057 | None:intergenic |
| GTTGTCAAGTTCAGGAAGCT+CGG | 0.516331 | 4.4:+38985005 | None:intergenic |
| TCCGTCTTTAGGTTGCTGAA+TGG | 0.517648 | 4.4:+38983737 | None:intergenic |
| CTTATTTGTCCATATCCTCC+AGG | 0.518004 | 4.4:-38983594 | MS.gene28313:CDS |
| GATGCCAAAAGCAGGTAACT+AGG | 0.520797 | 4.4:+38984113 | None:intergenic |
| TAGTCAGGAACAATGTACTT+AGG | 0.526216 | 4.4:+38984775 | None:intergenic |
| CTCGTGATTATATCATCAAA+GGG | 0.527399 | 4.4:+38983696 | None:intergenic |
| TGCTCTCTTAAACAATTCCC+TGG | 0.527535 | 4.4:-38984008 | MS.gene28313:CDS |
| GATTCCGTCTTATTCCTCTC+AGG | 0.528052 | 4.4:-38986962 | MS.gene28313:intron |
| AGGTTGCCATTATTGCTGCC+TGG | 0.528356 | 4.4:+38984878 | None:intergenic |
| CTGCAAATACCATGATAAGT+AGG | 0.530759 | 4.4:+38984389 | None:intergenic |
| GATCCATTGCGGCTTACTGT+TGG | 0.532942 | 4.4:-38983939 | MS.gene28313:CDS |
| CTTGTCGGAGGTACTACTTG+TGG | 0.534948 | 4.4:-38984904 | MS.gene28313:CDS |
| GGAATTGTTTGTGAACTCGT+TGG | 0.535480 | 4.4:-38983858 | MS.gene28313:CDS |
| TAGCTCAGCCCTCCAGCAAG+GGG | 0.536029 | 4.4:-38984267 | MS.gene28313:CDS |
| TTGTCAAGTTCAGGAAGCTC+GGG | 0.537006 | 4.4:+38985006 | None:intergenic |
| ATATCGGCCATGGTATTATC+CGG | 0.538000 | 4.4:-38984805 | MS.gene28313:CDS |
| GCATGGCCTCTGTTATGTCC+AGG | 0.538975 | 4.4:+38985084 | None:intergenic |
| TAGATCAGCCCCTTGCTGGA+GGG | 0.546263 | 4.4:+38984259 | None:intergenic |
| CTACTCCATGTAAGAAGTGA+AGG | 0.546727 | 4.4:-38983519 | MS.gene28313:CDS |
| GCTTTCAATGCACTAACTAA+AGG | 0.546743 | 4.4:+38985141 | None:intergenic |
| GGATCAATTGCAGGAATGGT+CGG | 0.547650 | 4.4:+38983957 | None:intergenic |
| TCTCTCAGTAATAACCTCAC+CGG | 0.551666 | 4.4:+38983554 | None:intergenic |
| ACTTAATCTTGGAACTTGTA+GGG | 0.553282 | 4.4:-38983814 | MS.gene28313:CDS |
| GATAAAGGAGAGCATTGGTA+AGG | 0.554559 | 4.4:-38983628 | MS.gene28313:CDS |
| CATCTAGGGATGCCAAAAGC+AGG | 0.554864 | 4.4:+38984105 | None:intergenic |
| TATGGGAAATACGAGAGCGT+TGG | 0.559578 | 4.4:-38985243 | MS.gene28313:CDS |
| TCTTTAGGTTGCTGAATGGA+AGG | 0.572281 | 4.4:+38983741 | None:intergenic |
| TTGAAAGGGGACGACGAGAG+TGG | 0.579236 | 4.4:+38987143 | None:intergenic |
| AAACCAACAGTAAGCCGCAA+TGG | 0.579462 | 4.4:+38983936 | None:intergenic |
| GGAAGAATAAGAAATTCTCC+TGG | 0.582632 | 4.4:+38984850 | None:intergenic |
| GACAACCTCTTCTGTCCCCA+AGG | 0.585276 | 4.4:-38984988 | MS.gene28313:CDS |
| GGGATCAATACAGGTATACC+TGG | 0.585742 | 4.4:+38983576 | None:intergenic |
| AGAGCATTGGTAAGGTTTCG+GGG | 0.589661 | 4.4:-38983620 | MS.gene28313:CDS |
| TCCATTCAGCAACCTAAAGA+CGG | 0.595343 | 4.4:-38983738 | MS.gene28313:CDS |
| GGTATACCTGTATTGATCCC+CGG | 0.595466 | 4.4:-38983573 | MS.gene28313:CDS |
| ATAATGGCAACCTGTTCACC+AGG | 0.600507 | 4.4:-38984868 | MS.gene28313:CDS |
| TTCAATGCACTAACTAAAGG+AGG | 0.600852 | 4.4:+38985144 | None:intergenic |
| GTAACGATAAAGGAGAGCAT+TGG | 0.603794 | 4.4:-38983633 | MS.gene28313:CDS |
| AATGTACTTAGGCACTGCAC+CGG | 0.604306 | 4.4:+38984786 | None:intergenic |
| TGTTTGGATCATCAAAGACA+TGG | 0.608692 | 4.4:-38984930 | MS.gene28313:CDS |
| GTGAACTGCTGCATTCATTG+GGG | 0.608779 | 4.4:+38985190 | None:intergenic |
| TTTATCGGCTATATCGGCCA+TGG | 0.610715 | 4.4:-38984815 | MS.gene28313:CDS |
| TTCCTGCAATTGATCCATTG+CGG | 0.611741 | 4.4:-38983950 | MS.gene28313:CDS |
| CTGATTGTTGATGAAGCTCA+CGG | 0.614046 | 4.4:-38984320 | MS.gene28313:CDS |
| CTTGGTTGAATACAGTATCA+GGG | 0.615374 | 4.4:+38984057 | None:intergenic |
| TCTCAAGCACTGAGATGCCA+GGG | 0.617988 | 4.4:+38983991 | None:intergenic |
| TCATCGAGGCAGGAGCGGCA+TGG | 0.619945 | 4.4:+38985067 | None:intergenic |
| CTTGTAGGGACCATGTCCAA+AGG | 0.621624 | 4.4:-38983800 | MS.gene28313:CDS |
| ATCCAGGAACTCGAATTGGA+AGG | 0.621828 | 4.4:-38984443 | MS.gene28313:CDS |
| ATGTCCAGGAAAGTGAAAAG+TGG | 0.622147 | 4.4:+38985098 | None:intergenic |
| TGGGTCCTTGGGGACAGAAG+AGG | 0.623355 | 4.4:+38984983 | None:intergenic |
| TCGAGTCATCGAGGCAGGAG+CGG | 0.624226 | 4.4:+38985062 | None:intergenic |
| CACTTTCCTGGACATAACAG+AGG | 0.631168 | 4.4:-38985090 | MS.gene28313:CDS |
| ATGCACTAACTAAAGGAGGT+AGG | 0.636092 | 4.4:+38985148 | None:intergenic |
| TGAGCTTCATCAACAATCAG+AGG | 0.639277 | 4.4:+38984323 | None:intergenic |
| AAGACATGGTTTCTTGTCGG+AGG | 0.641334 | 4.4:-38984916 | MS.gene28313:CDS |
| GCTTCTAATATGGGTCCTTG+GGG | 0.641541 | 4.4:+38984973 | None:intergenic |
| AACAGTACAGTCTACTCACA+AGG | 0.650174 | 4.4:-38984237 | MS.gene28313:CDS |
| ACCTGTATTGATCCCCGGTG+AGG | 0.653105 | 4.4:-38983568 | MS.gene28313:CDS |
| GAGACCTGAGAGGAATAAGA+CGG | 0.653253 | 4.4:+38986958 | None:intergenic |
| TCACCAGAGCTTCAGCAGAG+TGG | 0.657824 | 4.4:-38985171 | MS.gene28313:CDS |
| ACAACTATAGAAGAAAGTAA+GGG | 0.663858 | 4.4:+38983471 | None:intergenic |
| AAGCAGGTAACTAGGACTTG+TGG | 0.664545 | 4.4:+38984121 | None:intergenic |
| GAGCATTGGTAAGGTTTCGG+GGG | 0.674611 | 4.4:-38983619 | MS.gene28313:CDS |
| TCCAATGAGTCGAGTCATCG+AGG | 0.679421 | 4.4:+38985053 | None:intergenic |
| AGAAATGAAGGAGACCTGAG+AGG | 0.688557 | 4.4:+38986948 | None:intergenic |
| CACTGCACCGGATAATACCA+TGG | 0.689114 | 4.4:+38984798 | None:intergenic |
| ATCAATACAGGTATACCTGG+AGG | 0.690812 | 4.4:+38983579 | None:intergenic |
| TGGGTTATCAGGTTACGAAG+CGG | 0.691347 | 4.4:-38983904 | MS.gene28313:CDS |
| AATGATTGGGACATCGCTGG+TGG | 0.722880 | 4.4:-38984748 | MS.gene28313:CDS |
| TCTCAGTAATAACCTCACCG+GGG | 0.800637 | 4.4:+38983556 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAATTTCTAATCATAT+AGG | + | chr4.4:38984511-38984530 | None:intergenic | 10.0% |
| !! | ATATAATTTAGTGTAATCAT+AGG | - | chr4.4:38984294-38984313 | MS.gene28313:CDS | 15.0% |
| !! | TAGATAAAGAAAAAATATCT+AGG | - | chr4.4:38986447-38986466 | MS.gene28313:intron | 15.0% |
| !!! | AATTTTTAATGTAGTTTAGT+TGG | - | chr4.4:38984997-38985016 | MS.gene28313:CDS | 15.0% |
| !!! | ATTTTTAATGTAGTTTAGTT+GGG | - | chr4.4:38984998-38985017 | MS.gene28313:CDS | 15.0% |
| !!! | CATTTTTTTCAAATTATCAT+CGG | + | chr4.4:38984274-38984293 | None:intergenic | 15.0% |
| !!! | GTATTTAAAATAAGAAATGA+AGG | + | chr4.4:38983677-38983696 | None:intergenic | 15.0% |
| !! | AATAAAAAGTGAAAAAACCA+AGG | + | chr4.4:38983805-38983824 | None:intergenic | 20.0% |
| !! | ATAGCTCACTATATTTATTT+AGG | + | chr4.4:38984681-38984700 | None:intergenic | 20.0% |
| !! | ATCATTACTCATATGATAAA+CGG | + | chr4.4:38983746-38983765 | None:intergenic | 20.0% |
| !! | TAAAAGAAAAGTAACGATAA+AGG | - | chr4.4:38986967-38986986 | MS.gene28313:CDS | 20.0% |
| !! | TATTATACACTATCACAATT+TGG | - | chr4.4:38985914-38985933 | MS.gene28313:intron | 20.0% |
| !! | TCAAAAAAGTTGTCATTAAA+TGG | + | chr4.4:38983779-38983798 | None:intergenic | 20.0% |
| !!! | ACAACATTTCATTTTAATTC+AGG | + | chr4.4:38985231-38985250 | None:intergenic | 20.0% |
| !!! | TTGGTTTTTTCACTTTTTAT+TGG | - | chr4.4:38983804-38983823 | MS.gene28313:CDS | 20.0% |
| !!! | TTTTTAATGTAGTTTAGTTG+GGG | - | chr4.4:38984999-38985018 | MS.gene28313:CDS | 20.0% |
| !!! | TTTTTATTGGTCAAAAACAA+TGG | - | chr4.4:38983817-38983836 | MS.gene28313:CDS | 20.0% |
| ! | AAGACTAAGGTAAAAAGATA+TGG | - | chr4.4:38984460-38984479 | MS.gene28313:intron | 25.0% |
| ! | AATATCTAATATCATTGTCG+AGG | + | chr4.4:38986041-38986060 | None:intergenic | 25.0% |
| ! | ACAACTATAGAAGAAAGTAA+GGG | + | chr4.4:38987142-38987161 | None:intergenic | 25.0% |
| ! | AGACTAAGGTAAAAAGATAT+GGG | - | chr4.4:38984461-38984480 | MS.gene28313:intron | 25.0% |
| ! | AGTAAGAAAATCATGTAATC+AGG | + | chr4.4:38986016-38986035 | None:intergenic | 25.0% |
| ! | CACATAATTCTTGTAATCAA+GGG | + | chr4.4:38984946-38984965 | None:intergenic | 25.0% |
| ! | TCACATAATTCTTGTAATCA+AGG | + | chr4.4:38984947-38984966 | None:intergenic | 25.0% |
| ! | TCCTGACTATAAAAATGATT+GGG | - | chr4.4:38985849-38985868 | MS.gene28313:intron | 25.0% |
| ! | TTACAAGAATTATGTGACTA+TGG | - | chr4.4:38984950-38984969 | MS.gene28313:CDS | 25.0% |
| ! | TTCCTGACTATAAAAATGAT+TGG | - | chr4.4:38985848-38985867 | MS.gene28313:intron | 25.0% |
| ! | TTGTGTATAATACACCAAAA+TGG | + | chr4.4:38985087-38985106 | None:intergenic | 25.0% |
| !! | AATAAGCTGAAAACAACTTT+TGG | - | chr4.4:38984191-38984210 | MS.gene28313:CDS | 25.0% |
| !! | ATATCTTTTTACCTTAGTCT+TGG | + | chr4.4:38984461-38984480 | None:intergenic | 25.0% |
| !! | GTATGTGTTTCTGTATATAT+AGG | - | chr4.4:38984087-38984106 | MS.gene28313:CDS | 25.0% |
| !! | TGGCTATATTCTCTAAAAAT+TGG | - | chr4.4:38985934-38985953 | MS.gene28313:intron | 25.0% |
| !!! | TTTTTTTCTTTCTTTTCCTG+TGG | - | chr4.4:38986120-38986139 | MS.gene28313:intron | 25.0% |
| AAGCGGATGAAATCTTATAT+CGG | - | chr4.4:38986723-38986742 | MS.gene28313:intron | 30.0% | |
| AATAACTGAATCACCTGTAA+TGG | + | chr4.4:38985895-38985914 | None:intergenic | 30.0% | |
| AATAGCTTATGTACACGTTT+GGG | - | chr4.4:38983704-38983723 | MS.gene28313:CDS | 30.0% | |
| ACTTAATCTTGGAACTTGTA+GGG | - | chr4.4:38986796-38986815 | MS.gene28313:intron | 30.0% | |
| AGAAGAATTTGGTACGTATA+GGG | - | chr4.4:38984613-38984632 | MS.gene28313:intron | 30.0% | |
| ATCACTTATGCACTTAATCT+TGG | - | chr4.4:38986785-38986804 | MS.gene28313:intron | 30.0% | |
| CTCGTGATTATATCATCAAA+GGG | + | chr4.4:38986917-38986936 | None:intergenic | 30.0% | |
| GAAACTTGGTAGAAGAAATT+AGG | + | chr4.4:38984725-38984744 | None:intergenic | 30.0% | |
| GAAAGAGAACAACATTAGAT+AGG | + | chr4.4:38986091-38986110 | None:intergenic | 30.0% | |
| GAAATCTTATATCGGGATTT+CGG | - | chr4.4:38986731-38986750 | MS.gene28313:intron | 30.0% | |
| GACAACTATAGAAGAAAGTA+AGG | + | chr4.4:38987143-38987162 | None:intergenic | 30.0% | |
| GTATAATACACCAAAATGGT+CGG | + | chr4.4:38985083-38985102 | None:intergenic | 30.0% | |
| GTATTATTACTACTACGAAC+CGG | + | chr4.4:38984659-38984678 | None:intergenic | 30.0% | |
| GTCCTGAAATTCAATTTGTA+AGG | + | chr4.4:38983619-38983638 | None:intergenic | 30.0% | |
| GTCCTTACAAATTGAATTTC+AGG | - | chr4.4:38983614-38983633 | MS.gene28313:CDS | 30.0% | |
| GTTAGCACTTACTGAAAAAT+GGG | + | chr4.4:38983522-38983541 | None:intergenic | 30.0% | |
| GTTCAAAAGTTGTCAAAAAG+TGG | - | chr4.4:38983897-38983916 | MS.gene28313:CDS | 30.0% | |
| TAATAGCTTATGTACACGTT+TGG | - | chr4.4:38983703-38983722 | MS.gene28313:CDS | 30.0% | |
| TATTGGTCAAAAACAATGGA+GGG | - | chr4.4:38983821-38983840 | MS.gene28313:CDS | 30.0% | |
| TCTGTTTGTGCTTCTAATAT+GGG | + | chr4.4:38985649-38985668 | None:intergenic | 30.0% | |
| TTATTGGTCAAAAACAATGG+AGG | - | chr4.4:38983820-38983839 | MS.gene28313:CDS | 30.0% | |
| TTCTGTTTGTGCTTCTAATA+TGG | + | chr4.4:38985650-38985669 | None:intergenic | 30.0% | |
| TTTCAAATTATCATCGGTGT+TGG | + | chr4.4:38984268-38984287 | None:intergenic | 30.0% | |
| ! | AGAAGAAGAAAGAGATTTTG+TGG | + | chr4.4:38983544-38983563 | None:intergenic | 30.0% |
| ! | CAACAATCAGAGGAATTTTA+CGG | + | chr4.4:38986280-38986299 | None:intergenic | 30.0% |
| ! | CATTTGCTAATTTAATCGCT+TGG | + | chr4.4:38986574-38986593 | None:intergenic | 30.0% |
| ! | CTTTGATGATCCAAACAATT+TGG | + | chr4.4:38985677-38985696 | None:intergenic | 30.0% |
| ! | TCCTCGAAATTGTCATTTAT+CGG | - | chr4.4:38985780-38985799 | MS.gene28313:intron | 30.0% |
| ! | TCCTTTTCTGTTTATTTGCA+GGG | - | chr4.4:38983589-38983608 | MS.gene28313:CDS | 30.0% |
| ! | TTCCTTTTCTGTTTATTTGC+AGG | - | chr4.4:38983588-38983607 | MS.gene28313:CDS | 30.0% |
| ! | TTGTCATTTATCGGCTATAT+CGG | - | chr4.4:38985789-38985808 | MS.gene28313:intron | 30.0% |
| !! | TCCCAATCATTTTTATAGTC+AGG | + | chr4.4:38985853-38985872 | None:intergenic | 30.0% |
| AAATGAATCACCATGAGTTG+AGG | + | chr4.4:38984786-38984805 | None:intergenic | 35.0% | |
| ACACTATCCTTCATTGCAAT+GGG | - | chr4.4:38985281-38985300 | MS.gene28313:intron | 35.0% | |
| ACTTGCAAAAAATGCATCTC+TGG | + | chr4.4:38986948-38986967 | None:intergenic | 35.0% | |
| AGAAGAACATGAACAAAGAG+TGG | + | chr4.4:38984755-38984774 | None:intergenic | 35.0% | |
| AGCCTCTTGTGTAAAAAACA+GGG | + | chr4.4:38985115-38985134 | None:intergenic | 35.0% | |
| AGCGGATGAAATCTTATATC+GGG | - | chr4.4:38986724-38986743 | MS.gene28313:intron | 35.0% | |
| ATCACTTCACCTACTTATCA+TGG | - | chr4.4:38986212-38986231 | MS.gene28313:intron | 35.0% | |
| ATGGGCGTAAAATTGATCTT+TGG | - | chr4.4:38984479-38984498 | MS.gene28313:intron | 35.0% | |
| ATTGCAATGAAGGATAGTGT+AGG | + | chr4.4:38985281-38985300 | None:intergenic | 35.0% | |
| CACTTAATCTTGGAACTTGT+AGG | - | chr4.4:38986795-38986814 | MS.gene28313:intron | 35.0% | |
| CGATGTACATAAAAAACAGC+CGG | - | chr4.4:38987165-38987184 | MS.gene28313:CDS | 35.0% | |
| CTAAATTAGCCCACCTAAAT+TGG | + | chr4.4:38984052-38984071 | None:intergenic | 35.0% | |
| CTGCAAATACCATGATAAGT+AGG | + | chr4.4:38986224-38986243 | None:intergenic | 35.0% | |
| CTTGCAAAAAATGCATCTCT+GGG | + | chr4.4:38986947-38986966 | None:intergenic | 35.0% | |
| CTTGGTTGAATACAGTATCA+GGG | + | chr4.4:38986556-38986575 | None:intergenic | 35.0% | |
| CTTGTGTAAAAAACAGGGTA+AGG | + | chr4.4:38985110-38985129 | None:intergenic | 35.0% | |
| GAAGAATTTGGTACGTATAG+GGG | - | chr4.4:38984614-38984633 | MS.gene28313:intron | 35.0% | |
| GAATTGTTTGTGAACTCGTT+GGG | - | chr4.4:38986753-38986772 | MS.gene28313:intron | 35.0% | |
| GAGAAGAATTTGGTACGTAT+AGG | - | chr4.4:38984612-38984631 | MS.gene28313:intron | 35.0% | |
| GCTCGTGATTATATCATCAA+AGG | + | chr4.4:38986918-38986937 | None:intergenic | 35.0% | |
| GCTTTCAATGCACTAACTAA+AGG | + | chr4.4:38985472-38985491 | None:intergenic | 35.0% | |
| GGAAGAATAAGAAATTCTCC+TGG | + | chr4.4:38985763-38985782 | None:intergenic | 35.0% | |
| GGTTAGCACTTACTGAAAAA+TGG | + | chr4.4:38983523-38983542 | None:intergenic | 35.0% | |
| TAAACACTTGTGAGACTGTT+TGG | + | chr4.4:38984386-38984405 | None:intergenic | 35.0% | |
| TACACTATCCTTCATTGCAA+TGG | - | chr4.4:38985280-38985299 | MS.gene28313:intron | 35.0% | |
| TAGCTAATCTTATTACCCGA+GGG | + | chr4.4:38985206-38985225 | None:intergenic | 35.0% | |
| TAGTCAGGAACAATGTACTT+AGG | + | chr4.4:38985838-38985857 | None:intergenic | 35.0% | |
| TCAAAGACATGGTTTCTTGT+CGG | - | chr4.4:38985691-38985710 | MS.gene28313:intron | 35.0% | |
| TCAATCCCAAAAATCCGAAA+CGG | - | chr4.4:38983486-38983505 | MS.gene28313:CDS | 35.0% | |
| TCATAATGAGGCAGTACTAA+TGG | + | chr4.4:38985258-38985277 | None:intergenic | 35.0% | |
| TCCCTGCAAATAAACAGAAA+AGG | + | chr4.4:38983593-38983612 | None:intergenic | 35.0% | |
| TGTTTGGATCATCAAAGACA+TGG | - | chr4.4:38985680-38985699 | MS.gene28313:intron | 35.0% | |
| TTATTCCCGATAAAAGCCTT+TGG | + | chr4.4:38986829-38986848 | None:intergenic | 35.0% | |
| TTCAATGCACTAACTAAAGG+AGG | + | chr4.4:38985469-38985488 | None:intergenic | 35.0% | |
| TTGCAAAAAATGCATCTCTG+GGG | + | chr4.4:38986946-38986965 | None:intergenic | 35.0% | |
| ! | GAAAACCGTTTCGGATTTTT+GGG | + | chr4.4:38983494-38983513 | None:intergenic | 35.0% |
| ! | TGAAAACCGTTTCGGATTTT+TGG | + | chr4.4:38983495-38983514 | None:intergenic | 35.0% |
| ! | TTTCTTTCTTTTCCTGTGGT+TGG | - | chr4.4:38986124-38986143 | MS.gene28313:intron | 35.0% |
| !! | ATGTGTTTTTGTAACCCAGT+TGG | - | chr4.4:38983951-38983970 | MS.gene28313:CDS | 35.0% |
| !! | GCTGTTTTCATAAGCTATTC+TGG | - | chr4.4:38984156-38984175 | MS.gene28313:CDS | 35.0% |
| !! | TGTGTTTTTGTAACCCAGTT+GGG | - | chr4.4:38983952-38983971 | MS.gene28313:CDS | 35.0% |
| !!! | ACCTTTTTTCAACCAATCAG+CGG | - | chr4.4:38984827-38984846 | MS.gene28313:CDS | 35.0% |
| !!! | GACAACTTTTTTGACAACCT+TGG | - | chr4.4:38983785-38983804 | MS.gene28313:CDS | 35.0% |
| !!! | TACCCTGTTTTTTACACAAG+AGG | - | chr4.4:38985110-38985129 | MS.gene28313:CDS | 35.0% |
| !!! | TCGGATTTTTGGGATTGAAA+GGG | + | chr4.4:38983484-38983503 | None:intergenic | 35.0% |
| !!! | TTCGGATTTTTGGGATTGAA+AGG | + | chr4.4:38983485-38983504 | None:intergenic | 35.0% |
| AAAAATGATTGGGACATCGC+TGG | - | chr4.4:38985859-38985878 | MS.gene28313:intron | 40.0% | |
| AACAGTACAGTCTACTCACA+AGG | - | chr4.4:38986373-38986392 | MS.gene28313:intron | 40.0% | |
| AACCGCGAATTATGTGACTA+TGG | + | chr4.4:38984548-38984567 | None:intergenic | 40.0% | |
| AAGAAATTCTCCTGGTGAAC+AGG | + | chr4.4:38985755-38985774 | None:intergenic | 40.0% | |
| ACAGAAGCAGCCAAATTGTT+TGG | - | chr4.4:38985664-38985683 | MS.gene28313:intron | 40.0% | |
| ACGTTCTAACGAAGACTGTT+TGG | + | chr4.4:38984438-38984457 | None:intergenic | 40.0% | |
| AGAGTGGAAAGTGAGAAACT+TGG | + | chr4.4:38984739-38984758 | None:intergenic | 40.0% | |
| AGCTAATCTTATTACCCGAG+GGG | + | chr4.4:38985205-38985224 | None:intergenic | 40.0% | |
| AGGGAGAAAAAAGAAGAGAG+AGG | - | chr4.4:38983840-38983859 | MS.gene28313:CDS | 40.0% | |
| ATATCGGCCATGGTATTATC+CGG | - | chr4.4:38985805-38985824 | MS.gene28313:intron | 40.0% | |
| ATCAAGGGAGAATTGCGAAT+TGG | + | chr4.4:38984931-38984950 | None:intergenic | 40.0% | |
| ATCAATACAGGTATACCTGG+AGG | + | chr4.4:38987034-38987053 | None:intergenic | 40.0% | |
| ATGCACTAACTAAAGGAGGT+AGG | + | chr4.4:38985465-38985484 | None:intergenic | 40.0% | |
| ATGTCCAGGAAAGTGAAAAG+TGG | + | chr4.4:38985515-38985534 | None:intergenic | 40.0% | |
| ATTGTGGTCATCTGACTGAA+AGG | + | chr4.4:38985161-38985180 | None:intergenic | 40.0% | |
| CAATGGATCAATTGCAGGAA+TGG | + | chr4.4:38986660-38986679 | None:intergenic | 40.0% | |
| CACCATAGTCACATAATTCG+CGG | - | chr4.4:38984543-38984562 | MS.gene28313:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAAAC+AGG | + | chr4.4:38985116-38985135 | None:intergenic | 40.0% | |
| CTACTCCATGTAAGAAGTGA+AGG | - | chr4.4:38987091-38987110 | MS.gene28313:intron | 40.0% | |
| CTAGCTAATCTTATTACCCG+AGG | + | chr4.4:38985207-38985226 | None:intergenic | 40.0% | |
| CTCTCGTATTTCCCATATTC+TGG | + | chr4.4:38985364-38985383 | None:intergenic | 40.0% | |
| CTTATTTGTCCATATCCTCC+AGG | - | chr4.4:38987016-38987035 | MS.gene28313:intron | 40.0% | |
| GACAAAACCCATTGCAATGA+AGG | + | chr4.4:38985291-38985310 | None:intergenic | 40.0% | |
| GCACTTACTGAAAAATGGGA+AGG | + | chr4.4:38983518-38983537 | None:intergenic | 40.0% | |
| GCCGATAAATGACAATTTCG+AGG | + | chr4.4:38985784-38985803 | None:intergenic | 40.0% | |
| GCTTGGTTGAATACAGTATC+AGG | + | chr4.4:38986557-38986576 | None:intergenic | 40.0% | |
| GGAATTGTTTGTGAACTCGT+TGG | - | chr4.4:38986752-38986771 | MS.gene28313:intron | 40.0% | |
| GGATAGTGTAGGTCATAATG+AGG | + | chr4.4:38985270-38985289 | None:intergenic | 40.0% | |
| TCAGTAAGTACTCCGTCTTT+AGG | + | chr4.4:38986887-38986906 | None:intergenic | 40.0% | |
| TCCATTCAGCAACCTAAAGA+CGG | - | chr4.4:38986872-38986891 | MS.gene28313:intron | 40.0% | |
| TCGGGTAAATCATGAGCATA+TGG | + | chr4.4:38985589-38985608 | None:intergenic | 40.0% | |
| TCTCTCAGTAATAACCTCAC+CGG | + | chr4.4:38987059-38987078 | None:intergenic | 40.0% | |
| TGAGCTTCATCAACAATCAG+AGG | + | chr4.4:38986290-38986309 | None:intergenic | 40.0% | |
| TGCAAAAAATGCATCTCTGG+GGG | + | chr4.4:38986945-38986964 | None:intergenic | 40.0% | |
| TGCTCTCTTAAACAATTCCC+TGG | - | chr4.4:38986602-38986621 | MS.gene28313:intron | 40.0% | |
| TGCTTCTAATATGGGTCCTT+GGG | + | chr4.4:38985641-38985660 | None:intergenic | 40.0% | |
| TTCCTGCAATTGATCCATTG+CGG | - | chr4.4:38986660-38986679 | MS.gene28313:intron | 40.0% | |
| TTGAGATCTAGCAGCATCTA+GGG | + | chr4.4:38986522-38986541 | None:intergenic | 40.0% | |
| TTGGCGCAACAGTAAAATTG+TGG | + | chr4.4:38985177-38985196 | None:intergenic | 40.0% | |
| ! | AAGTCCTAGTTACCTGCTTT+TGG | - | chr4.4:38986493-38986512 | MS.gene28313:intron | 40.0% |
| ! | ACAATTTTACTGTTGCGCCA+AGG | - | chr4.4:38985176-38985195 | MS.gene28313:CDS | 40.0% |
| ! | ACCGCTGATTGGTTGAAAAA+AGG | + | chr4.4:38984831-38984850 | None:intergenic | 40.0% |
| ! | CATGTCCAAAGGCTTTTATC+GGG | - | chr4.4:38986821-38986840 | MS.gene28313:intron | 40.0% |
| ! | CCATGTCCAAAGGCTTTTAT+CGG | - | chr4.4:38986820-38986839 | MS.gene28313:intron | 40.0% |
| ! | CTCGGGTAATAAGATTAGCT+AGG | - | chr4.4:38985205-38985224 | MS.gene28313:CDS | 40.0% |
| ! | CTGATTGTTGATGAAGCTCA+CGG | - | chr4.4:38986290-38986309 | MS.gene28313:intron | 40.0% |
| ! | GTAACGATAAAGGAGAGCAT+TGG | - | chr4.4:38986977-38986996 | MS.gene28313:CDS | 40.0% |
| !! | AGTGAAGGTGCTGATATTAG+TGG | - | chr4.4:38987106-38987125 | MS.gene28313:CDS | 40.0% |
| !! | GATAAAGGAGAGCATTGGTA+AGG | - | chr4.4:38986982-38987001 | MS.gene28313:CDS | 40.0% |
| !! | TCATTGCAATGGGTTTTGTC+AGG | - | chr4.4:38985291-38985310 | MS.gene28313:intron | 40.0% |
| !! | TCTTTAGGTTGCTGAATGGA+AGG | + | chr4.4:38986872-38986891 | None:intergenic | 40.0% |
| !!! | CGGATTTTTGGGATTGAAAG+GGG | + | chr4.4:38983483-38983502 | None:intergenic | 40.0% |
| AAACCAACAGTAAGCCGCAA+TGG | + | chr4.4:38986677-38986696 | None:intergenic | 45.0% | |
| AAAGCATGGTTACCGCTGAT+TGG | + | chr4.4:38984842-38984861 | None:intergenic | 45.0% | |
| AAGACATGGTTTCTTGTCGG+AGG | - | chr4.4:38985694-38985713 | MS.gene28313:intron | 45.0% | |
| AAGCAGGTAACTAGGACTTG+TGG | + | chr4.4:38986492-38986511 | None:intergenic | 45.0% | |
| AATCAGCGGTAACCATGCTT+TGG | - | chr4.4:38984841-38984860 | MS.gene28313:CDS | 45.0% | |
| ACAGGTATACCTGGAGGATA+TGG | + | chr4.4:38987028-38987047 | None:intergenic | 45.0% | |
| ACATAATTCGCGGTTCGTTC+CGG | - | chr4.4:38984553-38984572 | MS.gene28313:intron | 45.0% | |
| AGAAATGAAGGAGACCTGAG+AGG | + | chr4.4:38983665-38983684 | None:intergenic | 45.0% | |
| AGCATTGCACTGCCAGAATA+TGG | - | chr4.4:38985349-38985368 | MS.gene28313:intron | 45.0% | |
| ATAATGGCAACCTGTTCACC+AGG | - | chr4.4:38985742-38985761 | MS.gene28313:intron | 45.0% | |
| ATCCAGGAACTCGAATTGGA+AGG | - | chr4.4:38986167-38986186 | MS.gene28313:intron | 45.0% | |
| ATTCTCCCCAGTGCCAATTT+AGG | - | chr4.4:38984036-38984055 | MS.gene28313:CDS | 45.0% | |
| CACTTTCCTGGACATAACAG+AGG | - | chr4.4:38985520-38985539 | MS.gene28313:intron | 45.0% | |
| CAGAAGAGGTTGTCAAGTTC+AGG | + | chr4.4:38985616-38985635 | None:intergenic | 45.0% | |
| CAGCACCTTCACTTCTTACA+TGG | + | chr4.4:38987099-38987118 | None:intergenic | 45.0% | |
| CCGATAAAAGCCTTTGGACA+TGG | + | chr4.4:38986823-38986842 | None:intergenic | 45.0% | |
| CGTTAGAACGTCCAAGACTA+AGG | - | chr4.4:38984447-38984466 | MS.gene28313:CDS | 45.0% | |
| CTCTCAGTAATAACCTCACC+GGG | + | chr4.4:38987058-38987077 | None:intergenic | 45.0% | |
| GAGACCTGAGAGGAATAAGA+CGG | + | chr4.4:38983655-38983674 | None:intergenic | 45.0% | |
| GAGACTGTTTGGAGAGCTTA+TGG | + | chr4.4:38984375-38984394 | None:intergenic | 45.0% | |
| GATGCCAAAAGCAGGTAACT+AGG | + | chr4.4:38986500-38986519 | None:intergenic | 45.0% | |
| GCATTGCACTGCCAGAATAT+GGG | - | chr4.4:38985350-38985369 | MS.gene28313:intron | 45.0% | |
| GCTTCTAATATGGGTCCTTG+GGG | + | chr4.4:38985640-38985659 | None:intergenic | 45.0% | |
| GGATCAATTGCAGGAATGGT+CGG | + | chr4.4:38986656-38986675 | None:intergenic | 45.0% | |
| GGGATCAATACAGGTATACC+TGG | + | chr4.4:38987037-38987056 | None:intergenic | 45.0% | |
| GGTAACTAGGACTTGTGGTT+TGG | + | chr4.4:38986487-38986506 | None:intergenic | 45.0% | |
| GGTGAACTGCTGCATTCATT+GGG | + | chr4.4:38985424-38985443 | None:intergenic | 45.0% | |
| GTCTTCAGACTCGACTCTTA+AGG | - | chr4.4:38986061-38986080 | MS.gene28313:intron | 45.0% | |
| GTGAACTGCTGCATTCATTG+GGG | + | chr4.4:38985423-38985442 | None:intergenic | 45.0% | |
| GTGCTTCTAATATGGGTCCT+TGG | + | chr4.4:38985642-38985661 | None:intergenic | 45.0% | |
| GTTGAGATCTAGCAGCATCT+AGG | + | chr4.4:38986523-38986542 | None:intergenic | 45.0% | |
| GTTGTCAAGTTCAGGAAGCT+CGG | + | chr4.4:38985608-38985627 | None:intergenic | 45.0% | |
| TAACCATGCTTTGGTACGCT+TGG | - | chr4.4:38984850-38984869 | MS.gene28313:CDS | 45.0% | |
| TACGCGACAGGAGAAGAATT+TGG | - | chr4.4:38984602-38984621 | MS.gene28313:intron | 45.0% | |
| TCATCTATGCTGCACATGTC+AGG | - | chr4.4:38986416-38986435 | MS.gene28313:intron | 45.0% | |
| TCTCAGTAATAACCTCACCG+GGG | + | chr4.4:38987057-38987076 | None:intergenic | 45.0% | |
| TGCTATCCAGGAACTCGAAT+TGG | - | chr4.4:38986163-38986182 | MS.gene28313:intron | 45.0% | |
| TGGGAAGGTGAAAACCGTTT+CGG | + | chr4.4:38983503-38983522 | None:intergenic | 45.0% | |
| TGGGTTATCAGGTTACGAAG+CGG | - | chr4.4:38986706-38986725 | MS.gene28313:intron | 45.0% | |
| TGGTGAACTGCTGCATTCAT+TGG | + | chr4.4:38985425-38985444 | None:intergenic | 45.0% | |
| TTGTCAAGTTCAGGAAGCTC+GGG | + | chr4.4:38985607-38985626 | None:intergenic | 45.0% | |
| ! | AATCACCATGAGTTGAGGAC+TGG | + | chr4.4:38984781-38984800 | None:intergenic | 45.0% |
| ! | AATGTACTTAGGCACTGCAC+CGG | + | chr4.4:38985827-38985846 | None:intergenic | 45.0% |
| ! | AGTACCGAATTCGGGTACTT+CGG | + | chr4.4:38984902-38984921 | None:intergenic | 45.0% |
| ! | ATCACCATGAGTTGAGGACT+GGG | + | chr4.4:38984780-38984799 | None:intergenic | 45.0% |
| ! | CGTATAGGGGTATACAGCTT+CGG | - | chr4.4:38984627-38984646 | MS.gene28313:intron | 45.0% |
| ! | GACTTGTGGTTTGGAGAGTT+TGG | + | chr4.4:38986478-38986497 | None:intergenic | 45.0% |
| ! | GATTCCGTCTTATTCCTCTC+AGG | - | chr4.4:38983648-38983667 | MS.gene28313:CDS | 45.0% |
| ! | GGTATACCTGTATTGATCCC+CGG | - | chr4.4:38987037-38987056 | MS.gene28313:intron | 45.0% |
| ! | TATGGGAAATACGAGAGCGT+TGG | - | chr4.4:38985367-38985386 | MS.gene28313:intron | 45.0% |
| ! | TGTAATCATAGGCGTCGTGT+CGG | - | chr4.4:38984305-38984324 | MS.gene28313:CDS | 45.0% |
| ! | TTCCTTCCAATTCGAGTTCC+TGG | + | chr4.4:38986172-38986191 | None:intergenic | 45.0% |
| ! | TTTATCGGCTATATCGGCCA+TGG | - | chr4.4:38985795-38985814 | MS.gene28313:intron | 45.0% |
| !! | AGAGCATTGGTAAGGTTTCG+GGG | - | chr4.4:38986990-38987009 | MS.gene28313:CDS | 45.0% |
| !! | ATGGGAAATACGAGAGCGTT+GGG | - | chr4.4:38985368-38985387 | MS.gene28313:intron | 45.0% |
| !! | GAGAGCATTGGTAAGGTTTC+GGG | - | chr4.4:38986989-38987008 | MS.gene28313:CDS | 45.0% |
| !! | GGAGAGCATTGGTAAGGTTT+CGG | - | chr4.4:38986988-38987007 | MS.gene28313:CDS | 45.0% |
| !! | TCCGTCTTTAGGTTGCTGAA+TGG | + | chr4.4:38986876-38986895 | None:intergenic | 45.0% |
| !! | TGCTCTGGTGGTATTGACTT+GGG | - | chr4.4:38983976-38983995 | MS.gene28313:CDS | 45.0% |
| !! | TGGTACGTGAGTACCGAATT+CGG | + | chr4.4:38984911-38984930 | None:intergenic | 45.0% |
| !! | TTGTCGGAGGTACTACTTGT+GGG | - | chr4.4:38985707-38985726 | MS.gene28313:intron | 45.0% |
| !! | TTTTGGGAGCTTGGGTTATC+AGG | - | chr4.4:38986695-38986714 | MS.gene28313:intron | 45.0% |
| !!! | ACTGTTGGTTTTTGGGAGCT+TGG | - | chr4.4:38986686-38986705 | MS.gene28313:intron | 45.0% |
| !!! | CTGTTGGTTTTTGGGAGCTT+GGG | - | chr4.4:38986687-38986706 | MS.gene28313:intron | 45.0% |
| !!! | GCGGCTTACTGTTGGTTTTT+GGG | - | chr4.4:38986679-38986698 | MS.gene28313:intron | 45.0% |
| !!! | TGCGGCTTACTGTTGGTTTT+TGG | - | chr4.4:38986678-38986697 | MS.gene28313:intron | 45.0% |
| AATGATTGGGACATCGCTGG+TGG | - | chr4.4:38985862-38985881 | MS.gene28313:intron | 50.0% | |
| AGCCCACCTAAATTGGCACT+GGG | + | chr4.4:38984045-38984064 | None:intergenic | 50.0% | |
| AGCCGCAATGGATCAATTGC+AGG | + | chr4.4:38986665-38986684 | None:intergenic | 50.0% | |
| AGGTACTACTTGTGGGATCC+AGG | - | chr4.4:38985714-38985733 | MS.gene28313:intron | 50.0% | |
| AGGTTGCCATTATTGCTGCC+TGG | + | chr4.4:38985735-38985754 | None:intergenic | 50.0% | |
| ATACCTGCAACACCAACCAC+AGG | + | chr4.4:38986139-38986158 | None:intergenic | 50.0% | |
| ATTCGGGTACTTCGGCGTAT+TGG | + | chr4.4:38984894-38984913 | None:intergenic | 50.0% | |
| CACTGCACCGGATAATACCA+TGG | + | chr4.4:38985815-38985834 | None:intergenic | 50.0% | |
| CATCTAGGGATGCCAAAAGC+AGG | + | chr4.4:38986508-38986527 | None:intergenic | 50.0% | |
| CTTGTAGGGACCATGTCCAA+AGG | - | chr4.4:38986810-38986829 | MS.gene28313:intron | 50.0% | |
| GAACCAAGCGTACCAAAGCA+TGG | + | chr4.4:38984856-38984875 | None:intergenic | 50.0% | |
| GATCCATTGCGGCTTACTGT+TGG | - | chr4.4:38986671-38986690 | MS.gene28313:intron | 50.0% | |
| TAGCCCACCTAAATTGGCAC+TGG | + | chr4.4:38984046-38984065 | None:intergenic | 50.0% | |
| TATACAGCTTCGGTACGCTC+CGG | - | chr4.4:38984637-38984656 | MS.gene28313:intron | 50.0% | |
| TCAAACCTGAGACCTCGAGT+AGG | + | chr4.4:38984017-38984036 | None:intergenic | 50.0% | |
| TCCAATGAGTCGAGTCATCG+AGG | + | chr4.4:38985560-38985579 | None:intergenic | 50.0% | |
| TCCCCAGTGCCAATTTAGGT+GGG | - | chr4.4:38984040-38984059 | MS.gene28313:CDS | 50.0% | |
| TGAAGCACAGACACAGACAC+CGG | - | chr4.4:38984220-38984239 | MS.gene28313:CDS | 50.0% | |
| TGGGATCCAGGCAGCAATAA+TGG | - | chr4.4:38985726-38985745 | MS.gene28313:intron | 50.0% | |
| ! | GGCAGCATTTTCTTCAGCTG+AGG | + | chr4.4:38985494-38985513 | None:intergenic | 50.0% |
| ! | GTTGGTGTCTATGTCGTGTC+CGG | + | chr4.4:38984242-38984261 | None:intergenic | 50.0% |
| ! | TACGCCGAAGTACCCGAATT+CGG | - | chr4.4:38984895-38984914 | MS.gene28313:CDS | 50.0% |
| !! | CTGCTCTGGTGGTATTGACT+TGG | - | chr4.4:38983975-38983994 | MS.gene28313:CDS | 50.0% |
| !! | CTTGTCGGAGGTACTACTTG+TGG | - | chr4.4:38985706-38985725 | MS.gene28313:intron | 50.0% |
| !! | GAGCATTGGTAAGGTTTCGG+GGG | - | chr4.4:38986991-38987010 | MS.gene28313:CDS | 50.0% |
| !! | GCAGGTATTGAGTGCTATCC+AGG | - | chr4.4:38986151-38986170 | MS.gene28313:intron | 50.0% |
| !! | GGTACGTGAGTACCGAATTC+GGG | + | chr4.4:38984910-38984929 | None:intergenic | 50.0% |
| !! | GTGGTATTGACTTGGGACCT+GGG | - | chr4.4:38983983-38984002 | MS.gene28313:CDS | 50.0% |
| !! | TATCATCGGTGTTGGCGTGT+TGG | + | chr4.4:38984260-38984279 | None:intergenic | 50.0% |
| !! | TCTCAAGCACTGAGATGCCA+GGG | + | chr4.4:38986622-38986641 | None:intergenic | 50.0% |
| !! | TGGTGGTGTCACTCCATTAC+AGG | - | chr4.4:38985879-38985898 | MS.gene28313:intron | 50.0% |
| !! | TTCTCAAGCACTGAGATGCC+AGG | + | chr4.4:38986623-38986642 | None:intergenic | 50.0% |
| !! | TTTCCTGTGGTTGGTGTTGC+AGG | - | chr4.4:38986133-38986152 | MS.gene28313:intron | 50.0% |
| !!! | GCTGCCACTTTTCACTTTCC+TGG | - | chr4.4:38985508-38985527 | MS.gene28313:intron | 50.0% |
| AAAATGGTCGGACCCCTTCC+CGG | + | chr4.4:38985071-38985090 | None:intergenic | 55.0% | |
| ACAAAGCTCCCGCATACGCA+GGG | - | chr4.4:38985044-38985063 | MS.gene28313:CDS | 55.0% | |
| ACCTCACCGGGGATCAATAC+AGG | + | chr4.4:38987046-38987065 | None:intergenic | 55.0% | |
| ATGAGTCGAGTCATCGAGGC+AGG | + | chr4.4:38985556-38985575 | None:intergenic | 55.0% | |
| CACAGACACTCCTCAGACGT+CGG | + | chr4.4:38984340-38984359 | None:intergenic | 55.0% | |
| CTCACCCAGTCCTCAACTCA+TGG | - | chr4.4:38984773-38984792 | MS.gene28313:CDS | 55.0% | |
| CTCCCCAGTGCCAATTTAGG+TGG | - | chr4.4:38984039-38984058 | MS.gene28313:CDS | 55.0% | |
| CTGTTAGATCAGCCCCTTGC+TGG | + | chr4.4:38986358-38986377 | None:intergenic | 55.0% | |
| GAAGCTCACGGTGCACATCT+AGG | - | chr4.4:38986302-38986321 | MS.gene28313:intron | 55.0% | |
| GACAACCTCTTCTGTCCCCA+AGG | - | chr4.4:38985622-38985641 | MS.gene28313:intron | 55.0% | |
| GCATGGCCTCTGTTATGTCC+AGG | + | chr4.4:38985529-38985548 | None:intergenic | 55.0% | |
| GCCCACCTAAATTGGCACTG+GGG | + | chr4.4:38984044-38984063 | None:intergenic | 55.0% | |
| GCCTCGATGACTCGACTCAT+TGG | - | chr4.4:38985556-38985575 | MS.gene28313:intron | 55.0% | |
| TAGATCAGCCCCTTGCTGGA+GGG | + | chr4.4:38986354-38986373 | None:intergenic | 55.0% | |
| TATTACCCGAGGGGAAGCCT+TGG | + | chr4.4:38985196-38985215 | None:intergenic | 55.0% | |
| TCACCAGAGCTTCAGCAGAG+TGG | - | chr4.4:38985439-38985458 | MS.gene28313:intron | 55.0% | |
| TTAGATCAGCCCCTTGCTGG+AGG | + | chr4.4:38986355-38986374 | None:intergenic | 55.0% | |
| TTGAAAGGGGACGACGAGAG+TGG | + | chr4.4:38983470-38983489 | None:intergenic | 55.0% | |
| ! | ACCTGTATTGATCCCCGGTG+AGG | - | chr4.4:38987042-38987061 | MS.gene28313:intron | 55.0% |
| ! | CTTTGGTACGCTTGGTTCGC+TGG | - | chr4.4:38984858-38984877 | MS.gene28313:CDS | 55.0% |
| !! | GGTGGTATTGACTTGGGACC+TGG | - | chr4.4:38983982-38984001 | MS.gene28313:CDS | 55.0% |
| ACCACCAGAGCAGCCCAACT+GGG | + | chr4.4:38983968-38983987 | None:intergenic | 60.0% | |
| AGGCCACTCTGCTGAAGCTC+TGG | + | chr4.4:38985445-38985464 | None:intergenic | 60.0% | |
| CACAAAGCTCCCGCATACGC+AGG | - | chr4.4:38985043-38985062 | MS.gene28313:CDS | 60.0% | |
| CTAGCTCAGCCCTCCAGCAA+GGG | - | chr4.4:38986342-38986361 | MS.gene28313:intron | 60.0% | |
| GTAACCCAGTTGGGCTGCTC+TGG | - | chr4.4:38983961-38983980 | MS.gene28313:CDS | 60.0% | |
| GTGCTCCTACTCGAGGTCTC+AGG | - | chr4.4:38984009-38984028 | MS.gene28313:CDS | 60.0% | |
| GTGTCGAACACCGACGTCTG+AGG | - | chr4.4:38984327-38984346 | MS.gene28313:CDS | 60.0% | |
| GTTCGTTCCGGTACGCGGTA+CGG | - | chr4.4:38984565-38984584 | MS.gene28313:intron | 60.0% | |
| TACCACCAGAGCAGCCCAAC+TGG | + | chr4.4:38983969-38983988 | None:intergenic | 60.0% | |
| TAGCTCAGCCCTCCAGCAAG+GGG | - | chr4.4:38986343-38986362 | MS.gene28313:intron | 60.0% | |
| TCGAGTCATCGAGGCAGGAG+CGG | + | chr4.4:38985551-38985570 | None:intergenic | 60.0% | |
| TGGGTCCTTGGGGACAGAAG+AGG | + | chr4.4:38985630-38985649 | None:intergenic | 60.0% | |
| TTCGTTCCGGTACGCGGTAC+GGG | - | chr4.4:38984566-38984585 | MS.gene28313:intron | 60.0% | |
| ! | GGGAAGGGGTCCGACCATTT+TGG | - | chr4.4:38985070-38985089 | MS.gene28313:CDS | 60.0% |
| ! | TCGAGTAGGAGCACACTCCC+AGG | + | chr4.4:38984003-38984022 | None:intergenic | 60.0% |
| ! | TGGGAGTGTGCTCCTACTCG+AGG | - | chr4.4:38984002-38984021 | MS.gene28313:CDS | 60.0% |
| ACCCAGTTGGGCTGCTCTGG+TGG | - | chr4.4:38983964-38983983 | MS.gene28313:CDS | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr4.4:38985056-38985075 | MS.gene28313:CDS | 65.0% | |
| CCTAGCTCAGCCCTCCAGCA+AGG | - | chr4.4:38986341-38986360 | MS.gene28313:intron | 65.0% | |
| CCTTGCTGGAGGGCTGAGCT+AGG | + | chr4.4:38986344-38986363 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | chr4.4:38985056-38985075 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr4.4:38985055-38985074 | MS.gene28313:CDS | 65.0% | |
| GTTGCGCCAAGGCTTCCCCT+CGG | - | chr4.4:38985187-38985206 | MS.gene28313:CDS | 65.0% | |
| TCATCGAGGCAGGAGCGGCA+TGG | + | chr4.4:38985546-38985565 | None:intergenic | 65.0% | |
| TCCGGTACGCGGTACGGGTA+CGG | - | chr4.4:38984571-38984590 | MS.gene28313:intron | 65.0% | |
| TCGCGGTTCGTTCCGGTACG+CGG | - | chr4.4:38984560-38984579 | MS.gene28313:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr4.4:38985055-38985074 | None:intergenic | 65.0% | |
| TTGCGCCAAGGCTTCCCCTC+GGG | - | chr4.4:38985188-38985207 | MS.gene28313:CDS | 65.0% | |
| ACGGGTTCGCGGTACGCGAC+AGG | - | chr4.4:38984590-38984609 | MS.gene28313:intron | 70.0% | |
| CCCGTACCCGTACCGCGTAC+CGG | + | chr4.4:38984575-38984594 | None:intergenic | 70.0% | |
| CCGGTACGCGGTACGGGTAC+GGG | - | chr4.4:38984572-38984591 | MS.gene28313:intron | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | - | chr4.4:38985054-38985073 | MS.gene28313:CDS | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr4.4:38985050-38985069 | MS.gene28313:CDS | 70.0% | |
| GCGGTACGGGTACGGGTTCG+CGG | - | chr4.4:38984579-38984598 | MS.gene28313:intron | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr4.4:38985049-38985068 | MS.gene28313:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 38983437 | 38987195 | 38983437 | ID=MS.gene28313 |
| chr4.4 | mRNA | 38983437 | 38987195 | 38983437 | ID=MS.gene28313.t1;Parent=MS.gene28313 |
| chr4.4 | exon | 38987103 | 38987195 | 38987103 | ID=MS.gene28313.t1.exon1;Parent=MS.gene28313.t1 |
| chr4.4 | CDS | 38987103 | 38987195 | 38987103 | ID=cds.MS.gene28313.t1;Parent=MS.gene28313.t1 |
| chr4.4 | exon | 38986963 | 38987022 | 38986963 | ID=MS.gene28313.t1.exon2;Parent=MS.gene28313.t1 |
| chr4.4 | CDS | 38986963 | 38987022 | 38986963 | ID=cds.MS.gene28313.t1;Parent=MS.gene28313.t1 |
| chr4.4 | exon | 38984732 | 38985289 | 38984732 | ID=MS.gene28313.t1.exon3;Parent=MS.gene28313.t1 |
| chr4.4 | CDS | 38984732 | 38985289 | 38984732 | ID=cds.MS.gene28313.t1;Parent=MS.gene28313.t1 |
| chr4.4 | exon | 38983437 | 38984477 | 38983437 | ID=MS.gene28313.t1.exon4;Parent=MS.gene28313.t1 |
| chr4.4 | CDS | 38983437 | 38984477 | 38983437 | ID=cds.MS.gene28313.t1;Parent=MS.gene28313.t1 |
| Gene Sequence |
| Protein sequence |
