Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33308.t1 | XP_013466929.1 | 83.5 | 170 | 21 | 2 | 1 | 170 | 1 | 163 | 7.70E-66 | 260 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33308.t1 | Q9LF68 | 75.3 | 93 | 23 | 0 | 73 | 165 | 84 | 176 | 5.6e-33 | 142.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33308.t1 | I3SAF3 | 83.5 | 170 | 21 | 2 | 1 | 170 | 1 | 163 | 5.6e-66 | 260.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene33308 | 0.867241 | 1.58E-65 | -1.69E-46 |
| MS.gene049173 | MS.gene33308 | 0.823433 | 1.39E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene33308 | 0.867868 | 9.96E-66 | -1.69E-46 |
| MS.gene049222 | MS.gene33308 | 0.866967 | 1.93E-65 | -1.69E-46 |
| MS.gene049232 | MS.gene33308 | 0.833849 | 4.21E-56 | -1.69E-46 |
| MS.gene049285 | MS.gene33308 | 0.886695 | 2.73E-72 | -1.69E-46 |
| MS.gene049320 | MS.gene33308 | 0.872988 | 2.08E-67 | -1.69E-46 |
| MS.gene049609 | MS.gene33308 | 0.807885 | 4.06E-50 | -1.69E-46 |
| MS.gene049627 | MS.gene33308 | 0.853756 | 1.94E-61 | -1.69E-46 |
| MS.gene049633 | MS.gene33308 | 0.819291 | 1.25E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene33308 | 0.86654 | 2.65E-65 | -1.69E-46 |
| MS.gene050163 | MS.gene33308 | 0.875775 | 2.36E-68 | -1.69E-46 |
| MS.gene050165 | MS.gene33308 | 0.883051 | 6.22E-71 | -1.69E-46 |
| MS.gene050170 | MS.gene33308 | 0.817721 | 2.85E-52 | -1.69E-46 |
| MS.gene050323 | MS.gene33308 | 0.829984 | 3.79E-55 | -1.69E-46 |
| MS.gene050333 | MS.gene33308 | 0.845485 | 3.94E-59 | -1.69E-46 |
| MS.gene050444 | MS.gene33308 | 0.86594 | 4.10E-65 | -1.69E-46 |
| MS.gene050504 | MS.gene33308 | 0.884265 | 2.22E-71 | -1.69E-46 |
| MS.gene050518 | MS.gene33308 | 0.88709 | 1.94E-72 | -1.69E-46 |
| MS.gene050577 | MS.gene33308 | 0.818366 | 2.03E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene33308 | 0.868621 | 5.70E-66 | -1.69E-46 |
| MS.gene050675 | MS.gene33308 | 0.843424 | 1.41E-58 | -1.69E-46 |
| MS.gene050699 | MS.gene33308 | 0.852315 | 5.00E-61 | -1.69E-46 |
| MS.gene050772 | MS.gene33308 | 0.834329 | 3.19E-56 | -1.69E-46 |
| MS.gene050868 | MS.gene33308 | 0.851642 | 7.77E-61 | -1.69E-46 |
| MS.gene050871 | MS.gene33308 | 0.852008 | 6.12E-61 | -1.69E-46 |
| MS.gene050876 | MS.gene33308 | 0.872053 | 4.27E-67 | -1.69E-46 |
| MS.gene05087 | MS.gene33308 | 0.838918 | 2.16E-57 | -1.69E-46 |
| MS.gene050904 | MS.gene33308 | 0.858324 | 8.91E-63 | -1.69E-46 |
| MS.gene050986 | MS.gene33308 | 0.862467 | 4.96E-64 | -1.69E-46 |
| MS.gene05100 | MS.gene33308 | 0.816987 | 4.17E-52 | -1.69E-46 |
| MS.gene051228 | MS.gene33308 | 0.802162 | 6.39E-49 | -1.69E-46 |
| MS.gene051268 | MS.gene33308 | 0.825146 | 5.50E-54 | -1.69E-46 |
| MS.gene051317 | MS.gene33308 | 0.870789 | 1.12E-66 | -1.69E-46 |
| MS.gene051551 | MS.gene33308 | 0.858717 | 6.80E-63 | -1.69E-46 |
| MS.gene051666 | MS.gene33308 | 0.809697 | 1.66E-50 | -1.69E-46 |
| MS.gene051694 | MS.gene33308 | 0.808127 | 3.61E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene33308 | 0.841481 | 4.63E-58 | -1.69E-46 |
| MS.gene051858 | MS.gene33308 | 0.838049 | 3.62E-57 | -1.69E-46 |
| MS.gene051949 | MS.gene33308 | 0.834661 | 2.63E-56 | -1.69E-46 |
| MS.gene052164 | MS.gene33308 | 0.806217 | 9.16E-50 | -1.69E-46 |
| MS.gene052271 | MS.gene33308 | 0.802814 | 4.69E-49 | -1.69E-46 |
| MS.gene052379 | MS.gene33308 | 0.829828 | 4.14E-55 | -1.69E-46 |
| MS.gene052482 | MS.gene33308 | 0.815253 | 1.02E-51 | -1.69E-46 |
| MS.gene052486 | MS.gene33308 | 0.825771 | 3.91E-54 | -1.69E-46 |
| MS.gene052503 | MS.gene33308 | 0.806218 | 9.15E-50 | -1.69E-46 |
| MS.gene052605 | MS.gene33308 | 0.824104 | 9.67E-54 | -1.69E-46 |
| MS.gene052822 | MS.gene33308 | 0.817667 | 2.93E-52 | -1.69E-46 |
| MS.gene052823 | MS.gene33308 | 0.802757 | 4.82E-49 | -1.69E-46 |
| MS.gene052825 | MS.gene33308 | 0.802607 | 5.18E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene33308 | 0.836507 | 8.99E-57 | -1.69E-46 |
| MS.gene052872 | MS.gene33308 | 0.841765 | 3.90E-58 | -1.69E-46 |
| MS.gene052966 | MS.gene33308 | 0.840846 | 6.80E-58 | -1.69E-46 |
| MS.gene053203 | MS.gene33308 | 0.834082 | 3.68E-56 | -1.69E-46 |
| MS.gene053207 | MS.gene33308 | 0.827464 | 1.54E-54 | -1.69E-46 |
| MS.gene053213 | MS.gene33308 | 0.837868 | 4.03E-57 | -1.69E-46 |
| MS.gene053284 | MS.gene33308 | 0.82143 | 4.05E-53 | -1.69E-46 |
| MS.gene053285 | MS.gene33308 | 0.814105 | 1.82E-51 | -1.69E-46 |
| MS.gene053286 | MS.gene33308 | 0.836549 | 8.77E-57 | -1.69E-46 |
| MS.gene053479 | MS.gene33308 | 0.826454 | 2.69E-54 | -1.69E-46 |
| MS.gene053480 | MS.gene33308 | 0.81657 | 5.16E-52 | -1.69E-46 |
| MS.gene053632 | MS.gene33308 | 0.828356 | 9.41E-55 | -1.69E-46 |
| MS.gene053633 | MS.gene33308 | 0.806588 | 7.65E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene33308 | 0.829728 | 4.38E-55 | -1.69E-46 |
| MS.gene053916 | MS.gene33308 | 0.80415 | 2.48E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene33308 | 0.82452 | 7.72E-54 | -1.69E-46 |
| MS.gene054600 | MS.gene33308 | 0.859929 | 2.94E-63 | -1.69E-46 |
| MS.gene054642 | MS.gene33308 | 0.861776 | 8.09E-64 | -1.69E-46 |
| MS.gene05470 | MS.gene33308 | 0.835912 | 1.27E-56 | -1.69E-46 |
| MS.gene054954 | MS.gene33308 | 0.877587 | 5.57E-69 | -1.69E-46 |
| MS.gene055206 | MS.gene33308 | 0.828784 | 7.42E-55 | -1.69E-46 |
| MS.gene055362 | MS.gene33308 | 0.870841 | 1.08E-66 | -1.69E-46 |
| MS.gene055502 | MS.gene33308 | 0.856392 | 3.32E-62 | -1.69E-46 |
| MS.gene055577 | MS.gene33308 | 0.876905 | 9.62E-69 | -1.69E-46 |
| MS.gene055634 | MS.gene33308 | 0.817269 | 3.60E-52 | -1.69E-46 |
| MS.gene055636 | MS.gene33308 | 0.825555 | 4.40E-54 | -1.69E-46 |
| MS.gene055638 | MS.gene33308 | 0.827787 | 1.29E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene33308 | 0.806672 | 7.34E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene33308 | 0.830939 | 2.21E-55 | -1.69E-46 |
| MS.gene055750 | MS.gene33308 | 0.804424 | 2.17E-49 | -1.69E-46 |
| MS.gene055751 | MS.gene33308 | 0.839341 | 1.68E-57 | -1.69E-46 |
| MS.gene055776 | MS.gene33308 | 0.837341 | 5.50E-57 | -1.69E-46 |
| MS.gene055849 | MS.gene33308 | 0.809479 | 1.85E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene33308 | 0.820695 | 5.99E-53 | -1.69E-46 |
| MS.gene055941 | MS.gene33308 | 0.852152 | 5.57E-61 | -1.69E-46 |
| MS.gene056374 | MS.gene33308 | 0.838838 | 2.27E-57 | -1.69E-46 |
| MS.gene056504 | MS.gene33308 | 0.854678 | 1.05E-61 | -1.69E-46 |
| MS.gene056510 | MS.gene33308 | 0.854743 | 1.00E-61 | -1.69E-46 |
| MS.gene056549 | MS.gene33308 | 0.817429 | 3.31E-52 | -1.69E-46 |
| MS.gene056550 | MS.gene33308 | -0.808133 | 3.60E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene33308 | 0.8628 | 3.92E-64 | -1.69E-46 |
| MS.gene056692 | MS.gene33308 | 0.843332 | 1.50E-58 | -1.69E-46 |
| MS.gene056898 | MS.gene33308 | 0.881025 | 3.38E-70 | -1.69E-46 |
| MS.gene057129 | MS.gene33308 | 0.804479 | 2.12E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene33308 | 0.804042 | 2.61E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene33308 | 0.832218 | 1.07E-55 | -1.69E-46 |
| MS.gene057658 | MS.gene33308 | 0.822464 | 2.34E-53 | -1.69E-46 |
| MS.gene057831 | MS.gene33308 | 0.846123 | 2.65E-59 | -1.69E-46 |
| MS.gene057857 | MS.gene33308 | 0.819391 | 1.19E-52 | -1.69E-46 |
| MS.gene057926 | MS.gene33308 | 0.838266 | 3.19E-57 | -1.69E-46 |
| MS.gene058334 | MS.gene33308 | -0.804447 | 2.15E-49 | -1.69E-46 |
| MS.gene058335 | MS.gene33308 | 0.828041 | 1.12E-54 | -1.69E-46 |
| MS.gene058338 | MS.gene33308 | 0.814882 | 1.23E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene33308 | 0.817026 | 4.08E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene33308 | 0.868013 | 8.95E-66 | -1.69E-46 |
| MS.gene058544 | MS.gene33308 | 0.827095 | 1.89E-54 | -1.69E-46 |
| MS.gene058719 | MS.gene33308 | 0.801397 | 9.18E-49 | -1.69E-46 |
| MS.gene058723 | MS.gene33308 | 0.811777 | 5.91E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene33308 | 0.896571 | 3.25E-76 | -1.69E-46 |
| MS.gene058838 | MS.gene33308 | 0.814336 | 1.62E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene33308 | 0.88084 | 3.94E-70 | -1.69E-46 |
| MS.gene059023 | MS.gene33308 | 0.869189 | 3.73E-66 | -1.69E-46 |
| MS.gene059029 | MS.gene33308 | 0.815314 | 9.85E-52 | -1.69E-46 |
| MS.gene05912 | MS.gene33308 | 0.847555 | 1.07E-59 | -1.69E-46 |
| MS.gene05913 | MS.gene33308 | 0.802421 | 5.66E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene33308 | 0.825338 | 4.95E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene33308 | 0.89212 | 2.13E-74 | -1.69E-46 |
| MS.gene059718 | MS.gene33308 | 0.849246 | 3.66E-60 | -1.69E-46 |
| MS.gene059756 | MS.gene33308 | 0.82683 | 2.19E-54 | -1.69E-46 |
| MS.gene059801 | MS.gene33308 | 0.821822 | 3.29E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene33308 | 0.846876 | 1.65E-59 | -1.69E-46 |
| MS.gene059902 | MS.gene33308 | 0.829235 | 5.77E-55 | -1.69E-46 |
| MS.gene06000 | MS.gene33308 | 0.814616 | 1.41E-51 | -1.69E-46 |
| MS.gene060602 | MS.gene33308 | -0.82172 | 3.47E-53 | -1.69E-46 |
| MS.gene060703 | MS.gene33308 | 0.883398 | 4.64E-71 | -1.69E-46 |
| MS.gene060762 | MS.gene33308 | 0.874112 | 8.71E-68 | -1.69E-46 |
| MS.gene06077 | MS.gene33308 | 0.854141 | 1.50E-61 | -1.69E-46 |
| MS.gene06092 | MS.gene33308 | 0.829642 | 4.59E-55 | -1.69E-46 |
| MS.gene060982 | MS.gene33308 | 0.835574 | 1.55E-56 | -1.69E-46 |
| MS.gene061134 | MS.gene33308 | 0.809176 | 2.15E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene33308 | 0.849019 | 4.23E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33308.t1 | MTR_1g040145 | 82.759 | 174 | 15 | 3 | 1 | 170 | 1 | 163 | 1.92e-98 | 281 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33308.t1 | AT5G17560 | 75.269 | 93 | 23 | 0 | 73 | 165 | 84 | 176 | 1.62e-48 | 155 |
| MS.gene33308.t1 | AT5G17560 | 61.224 | 49 | 19 | 0 | 73 | 121 | 84 | 132 | 1.08e-15 | 70.1 |
| MS.gene33308.t1 | AT5G17560 | 63.830 | 47 | 17 | 0 | 73 | 119 | 84 | 130 | 1.23e-15 | 69.7 |
Find 36 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGCAAAGCTCTTCCCGTTT+TGG | 0.252036 | 1.1:+24194173 | MS.gene33308:CDS |
| AATAATTTCTCATCATGTTT+AGG | 0.269314 | 1.1:-24194294 | None:intergenic |
| GGCTGCTTCAGCAGGAGTTT+TGG | 0.331235 | 1.1:-24199059 | None:intergenic |
| TTCCCGGCGGCTGCTTCAGC+AGG | 0.381862 | 1.1:-24199067 | None:intergenic |
| CCGTAAGGTCGAACCAAAAC+GGG | 0.405363 | 1.1:-24194186 | None:intergenic |
| GACCATCCTTTGCCTATTCA+CGG | 0.418047 | 1.1:-24198978 | None:intergenic |
| AGGGACAATCAGCCGTGAAT+AGG | 0.422097 | 1.1:+24198966 | MS.gene33308:CDS |
| ATGGTGACGGACGCCATGTT+AGG | 0.435349 | 1.1:+24196531 | MS.gene33308:CDS |
| GTCTCTGTAAAGGATGCTTA+TGG | 0.438536 | 1.1:+24196512 | MS.gene33308:CDS |
| GGATGGTCTATAAAGCCATA+TGG | 0.439769 | 1.1:+24198993 | MS.gene33308:CDS |
| ACCGTAAGGTCGAACCAAAA+CGG | 0.443202 | 1.1:-24194187 | None:intergenic |
| GAGAGAAGTAGTTTGTGAAG+TGG | 0.462902 | 1.1:-24194259 | None:intergenic |
| ACTCTGAAGCTCCTCCCATA+TGG | 0.480068 | 1.1:-24199008 | None:intergenic |
| CATTCAATCTATGCAGCAAA+AGG | 0.489634 | 1.1:+24194398 | MS.gene33308:CDS |
| ACTCCTGCTGAAGCAGCCGC+CGG | 0.495922 | 1.1:+24199064 | MS.gene33308:CDS |
| CTCCTGCTGAAGCAGCCGCC+GGG | 0.517457 | 1.1:+24199065 | MS.gene33308:CDS |
| TGCTGCATAGATTGAATGAG+AGG | 0.526410 | 1.1:-24194393 | None:intergenic |
| TGCAGAAACAGTCTCTGTAA+AGG | 0.528582 | 1.1:+24196502 | MS.gene33308:CDS |
| CCAAAACGGGAAGAGCTTTG+CGG | 0.536712 | 1.1:-24194173 | None:intergenic |
| GATGGTCTATAAAGCCATAT+GGG | 0.540058 | 1.1:+24198994 | MS.gene33308:CDS |
| GTGGATTTGTTGTTACCGTA+AGG | 0.541695 | 1.1:-24194201 | None:intergenic |
| GCTACTAATGTAAACGATGC+TGG | 0.547238 | 1.1:+24194357 | MS.gene33308:CDS |
| TGTTGTATCGACAGCCTTCG+AGG | 0.555514 | 1.1:+24198946 | MS.gene33308:CDS |
| AAGAGCTTTGCGGAGTAAAG+TGG | 0.561290 | 1.1:-24194163 | None:intergenic |
| GTAAAGGATGCTTATGGTGA+CGG | 0.570886 | 1.1:+24196518 | MS.gene33308:CDS |
| CACGGCTGATTGTCCCTCGA+AGG | 0.576768 | 1.1:-24198960 | None:intergenic |
| AGCTTTGCGGAGTAAAGTGG+TGG | 0.589293 | 1.1:-24194160 | None:intergenic |
| AGCCGTGAATAGGCAAAGGA+TGG | 0.626414 | 1.1:+24198976 | MS.gene33308:CDS |
| TAGTTTGTGAAGTGGATCTG+AGG | 0.629676 | 1.1:-24194251 | None:intergenic |
| AATCAGCCGTGAATAGGCAA+AGG | 0.635801 | 1.1:+24198972 | MS.gene33308:CDS |
| GTTGTATCGACAGCCTTCGA+GGG | 0.642242 | 1.1:+24198947 | MS.gene33308:CDS |
| TTACGGTAACAACAAATCCA+CGG | 0.683361 | 1.1:+24194203 | MS.gene33308:CDS |
| GCTTTGCGGAGTAAAGTGGT+GGG | 0.693255 | 1.1:-24194159 | None:intergenic |
| GGTCTATAAAGCCATATGGG+AGG | 0.704868 | 1.1:+24198997 | MS.gene33308:CDS |
| CTTGCGAATAGAATTAACAG+TGG | 0.711646 | 1.1:-24194322 | None:intergenic |
| ATGATTACGAAAGAGAACCG+TGG | 0.718260 | 1.1:-24194220 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAAAAAAAATTAATCTA+AGG | + | chr1.1:24195012-24195031 | MS.gene33308:intron | 10.0% |
| !!! | TAATTTTTTTTGTTTTGTTT+CGG | - | chr1.1:24195007-24195026 | None:intergenic | 10.0% |
| !! | AGTATCTAAATTTAGATATA+GGG | + | chr1.1:24196100-24196119 | MS.gene33308:intron | 15.0% |
| !! | ATGAAATTCTGAATTTATTT+AGG | - | chr1.1:24196147-24196166 | None:intergenic | 15.0% |
| !! | TAAATTTCATAAACTTAGAT+AGG | + | chr1.1:24196077-24196096 | MS.gene33308:intron | 15.0% |
| !! | TAAATTTCATAATTGATTGA+TGG | + | chr1.1:24196287-24196306 | MS.gene33308:intron | 15.0% |
| !! | TAGATATTTCAAATTTACTA+AGG | - | chr1.1:24196767-24196786 | None:intergenic | 15.0% |
| !! | TATCTAAGTTTATGAAATTT+AGG | - | chr1.1:24196078-24196097 | None:intergenic | 15.0% |
| !! | TTGTATAACAATATAGATTT+GGG | - | chr1.1:24195492-24195511 | None:intergenic | 15.0% |
| !!! | AAAATATATCACTTAGTTTT+TGG | - | chr1.1:24197534-24197553 | None:intergenic | 15.0% |
| !!! | AAATATATCACTTAGTTTTT+GGG | - | chr1.1:24197533-24197552 | None:intergenic | 15.0% |
| !!! | AAGATATTTTAAATTTGAAG+AGG | - | chr1.1:24195690-24195709 | None:intergenic | 15.0% |
| !!! | AATTTCATAATTCTAAGATA+TGG | + | chr1.1:24196159-24196178 | MS.gene33308:intron | 15.0% |
| !!! | ATAATATGATAATGATTCAA+TGG | + | chr1.1:24196852-24196871 | MS.gene33308:intron | 15.0% |
| !!! | ATATCTTTATTTTTCTATCT+AGG | + | chr1.1:24195948-24195967 | MS.gene33308:intron | 15.0% |
| !!! | ATTTCATAATTCTAAGATAT+AGG | + | chr1.1:24196160-24196179 | MS.gene33308:intron | 15.0% |
| !!! | ATTTCATAATTCTAAGATAT+GGG | + | chr1.1:24196160-24196179 | MS.gene33308:intron | 15.0% |
| !!! | ATTTTGCTAGAAATTTATTT+AGG | + | chr1.1:24195919-24195938 | MS.gene33308:intron | 15.0% |
| !!! | TATGTATTGATCTAATAATA+GGG | + | chr1.1:24198149-24198168 | MS.gene33308:intron | 15.0% |
| !!! | TTAATTGTTATCTCTTTTTT+GGG | + | chr1.1:24196410-24196429 | MS.gene33308:intron | 15.0% |
| !!! | TTTTTCTAATTTCTATAACA+CGG | + | chr1.1:24196968-24196987 | MS.gene33308:intron | 15.0% |
| !! | AATAATTTCTCATCATGTTT+AGG | - | chr1.1:24194297-24194316 | None:intergenic | 20.0% |
| !! | AATTAATTTAATAGTCAAGC+TGG | + | chr1.1:24197496-24197515 | MS.gene33308:intron | 20.0% |
| !! | AGATAGAAAAGTAAAGATAT+AGG | + | chr1.1:24196020-24196039 | MS.gene33308:intron | 20.0% |
| !! | ATATGGATTCTAATCAATTT+AGG | + | chr1.1:24195288-24195307 | MS.gene33308:intron | 20.0% |
| !! | GAGTATCTAAATTTAGATAT+AGG | + | chr1.1:24196099-24196118 | MS.gene33308:intron | 20.0% |
| !! | GTTGTATAACAATATAGATT+TGG | - | chr1.1:24195493-24195512 | None:intergenic | 20.0% |
| !! | TATGGATTCTAATCAATTTA+GGG | + | chr1.1:24195289-24195308 | MS.gene33308:intron | 20.0% |
| !! | TTAACTATTGAAGTGAATTT+CGG | + | chr1.1:24196565-24196584 | MS.gene33308:intron | 20.0% |
| !! | TTAGTTTATTGAACAATACT+AGG | - | chr1.1:24197196-24197215 | None:intergenic | 20.0% |
| !!! | AAAAATTAATCTAAGGTTTC+AGG | + | chr1.1:24195019-24195038 | MS.gene33308:intron | 20.0% |
| !!! | AAATCTAAAAGTATACAACT+AGG | - | chr1.1:24197029-24197048 | None:intergenic | 20.0% |
| !!! | AACTCAAAAAAAGTATTTGA+AGG | + | chr1.1:24195446-24195465 | MS.gene33308:intron | 20.0% |
| !!! | AATATATCACTTAGTTTTTG+GGG | - | chr1.1:24197532-24197551 | None:intergenic | 20.0% |
| !!! | AATCAAATCATTTGTTAGTA+CGG | - | chr1.1:24198205-24198224 | None:intergenic | 20.0% |
| !!! | ACTCAAAAAAAGTATTTGAA+GGG | + | chr1.1:24195447-24195466 | MS.gene33308:intron | 20.0% |
| !!! | ACTGAATCTTTTAAAAAAGA+TGG | + | chr1.1:24195742-24195761 | MS.gene33308:intron | 20.0% |
| !!! | AGAAAATTCAATTTTCAGTT+TGG | - | chr1.1:24198778-24198797 | None:intergenic | 20.0% |
| !!! | ATATAACATTTAAAGCATAG+TGG | + | chr1.1:24198449-24198468 | MS.gene33308:intron | 20.0% |
| !!! | ATATTTTTCCTCAAAATTGA+AGG | - | chr1.1:24196347-24196366 | None:intergenic | 20.0% |
| !!! | ATGTATTGATCTAATAATAG+GGG | + | chr1.1:24198150-24198169 | MS.gene33308:intron | 20.0% |
| !!! | CAAACTCTAGAAATTTATTT+AGG | + | chr1.1:24196257-24196276 | MS.gene33308:intron | 20.0% |
| !!! | CTTAATTGTTATCTCTTTTT+TGG | + | chr1.1:24196409-24196428 | MS.gene33308:intron | 20.0% |
| !!! | GTATGTATTGATCTAATAAT+AGG | + | chr1.1:24198148-24198167 | MS.gene33308:intron | 20.0% |
| !!! | TAATTGTTATCTCTTTTTTG+GGG | + | chr1.1:24196411-24196430 | MS.gene33308:intron | 20.0% |
| !!! | TGTTGATTTTGATAGTTAAA+TGG | + | chr1.1:24196640-24196659 | MS.gene33308:intron | 20.0% |
| !!! | TTAAACTGAAAGTGTAAATA+TGG | + | chr1.1:24195271-24195290 | MS.gene33308:intron | 20.0% |
| !!! | TTTAATTTAGTGCAAAACAA+AGG | - | chr1.1:24198378-24198397 | None:intergenic | 20.0% |
| !!! | TTTGTTTTGCACTAAATTAA+AGG | + | chr1.1:24198377-24198396 | MS.gene33308:intron | 20.0% |
| !!! | TTTTTGAGTTCTTTCAAATT+AGG | - | chr1.1:24195436-24195455 | None:intergenic | 20.0% |
| ! | AAAAATATGCTTACCTAACA+TGG | - | chr1.1:24196547-24196566 | None:intergenic | 25.0% |
| ! | AAAACAAAGGTCTTTCAAAA+AGG | - | chr1.1:24198365-24198384 | None:intergenic | 25.0% |
| ! | AAAAGCTATTAACATGATGT+TGG | - | chr1.1:24198030-24198049 | None:intergenic | 25.0% |
| ! | AAACTATCAAAACCTTATTC+AGG | - | chr1.1:24198074-24198093 | None:intergenic | 25.0% |
| ! | AAGTTTATTCTTGAAGTGAT+AGG | - | chr1.1:24197084-24197103 | None:intergenic | 25.0% |
| ! | AATTAAGTTTCTCTGTTTAG+AGG | - | chr1.1:24197154-24197173 | None:intergenic | 25.0% |
| ! | ACAAAACTTCAGATATTCAT+AGG | - | chr1.1:24196811-24196830 | None:intergenic | 25.0% |
| ! | ACAACTATCAATGTAAAACA+TGG | - | chr1.1:24198859-24198878 | None:intergenic | 25.0% |
| ! | AGAAAAGTAAAGATATAGGT+AGG | + | chr1.1:24196024-24196043 | MS.gene33308:intron | 25.0% |
| ! | AGAAGCAATGATATAAGAAA+AGG | - | chr1.1:24195837-24195856 | None:intergenic | 25.0% |
| ! | AGGTTGTAACTATCATAATT+CGG | - | chr1.1:24196747-24196766 | None:intergenic | 25.0% |
| ! | ATATACAATGTTAACCACAA+AGG | - | chr1.1:24196601-24196620 | None:intergenic | 25.0% |
| ! | ATCATAATTCGGAATATACA+TGG | - | chr1.1:24196736-24196755 | None:intergenic | 25.0% |
| ! | ATCCATTTGCATCTTTATTA+AGG | + | chr1.1:24198335-24198354 | MS.gene33308:intron | 25.0% |
| ! | CTGTATGAATATTGCATTTA+TGG | - | chr1.1:24197292-24197311 | None:intergenic | 25.0% |
| ! | GCAAATTCATAAGATAGTAA+AGG | - | chr1.1:24196313-24196332 | None:intergenic | 25.0% |
| ! | TATATCTACAGATGTTTCAA+TGG | - | chr1.1:24198432-24198451 | None:intergenic | 25.0% |
| ! | TCTAGATACAATCATCAAAT+AGG | - | chr1.1:24196003-24196022 | None:intergenic | 25.0% |
| ! | TTATGCAGAAAAATTAAGAG+TGG | + | chr1.1:24197866-24197885 | MS.gene33308:intron | 25.0% |
| ! | TTCCTTAATAAAGATGCAAA+TGG | - | chr1.1:24198340-24198359 | None:intergenic | 25.0% |
| !! | AAAGTGCCATTAAAATTGTT+GGG | + | chr1.1:24198522-24198541 | MS.gene33308:intron | 25.0% |
| !! | AACTTTCCCAACAATTTTAA+TGG | - | chr1.1:24198531-24198550 | None:intergenic | 25.0% |
| !! | AAGGATAACTTTTATCAATG+AGG | - | chr1.1:24198817-24198836 | None:intergenic | 25.0% |
| !! | AGATCAATACATACTTGTTT+TGG | - | chr1.1:24198142-24198161 | None:intergenic | 25.0% |
| !! | ATGATTTGATTTCAATAGCT+AGG | + | chr1.1:24198214-24198233 | MS.gene33308:intron | 25.0% |
| !! | TATGATAATGATTCAATGGT+TGG | + | chr1.1:24196856-24196875 | MS.gene33308:intron | 25.0% |
| !! | TTCAATTTTCAGTTTGGATT+TGG | - | chr1.1:24198772-24198791 | None:intergenic | 25.0% |
| !! | TTTACATTGATAGTTGTGTT+TGG | + | chr1.1:24198862-24198881 | MS.gene33308:intron | 25.0% |
| !!! | AAAAGTGCCATTAAAATTGT+TGG | + | chr1.1:24198521-24198540 | MS.gene33308:intron | 25.0% |
| !!! | AATTGTAACTGTGTTGTTTA+AGG | - | chr1.1:24194608-24194627 | None:intergenic | 25.0% |
| !!! | ACTATCTGGAAAAAGTATTT+AGG | + | chr1.1:24197900-24197919 | MS.gene33308:intron | 25.0% |
| !!! | AGCAAAAGCACATTTTTTTT+TGG | + | chr1.1:24197728-24197747 | MS.gene33308:intron | 25.0% |
| !!! | GATCAATACATACTTGTTTT+GGG | - | chr1.1:24198141-24198160 | None:intergenic | 25.0% |
| !!! | TATATTTTGATTGAAGAGCA+TGG | + | chr1.1:24197546-24197565 | MS.gene33308:intron | 25.0% |
| AAAATCGGTTACAAAACTGA+TGG | + | chr1.1:24194859-24194878 | MS.gene33308:intron | 30.0% | |
| AACCAACTAGATAATAAGCT+CGG | + | chr1.1:24198613-24198632 | MS.gene33308:intron | 30.0% | |
| ACAATTCATCGAACATGTAA+GGG | - | chr1.1:24194462-24194481 | None:intergenic | 30.0% | |
| AGTGTTCCAACAGAATTATA+AGG | + | chr1.1:24195235-24195254 | MS.gene33308:intron | 30.0% | |
| CAACACAGTTACAATTGTAT+AGG | + | chr1.1:24194612-24194631 | MS.gene33308:intron | 30.0% | |
| CAACACTAGTGTTTATATAG+TGG | - | chr1.1:24195154-24195173 | None:intergenic | 30.0% | |
| CTAATAATAGGGGTAAAAGA+GGG | + | chr1.1:24198160-24198179 | MS.gene33308:intron | 30.0% | |
| CTTCTAACACTACTTCTTTA+GGG | - | chr1.1:24195868-24195887 | None:intergenic | 30.0% | |
| CTTGTGATGAGATTATGAAA+CGG | - | chr1.1:24198403-24198422 | None:intergenic | 30.0% | |
| GTCAATGTAAAAATTGCCTT+TGG | + | chr1.1:24197778-24197797 | MS.gene33308:intron | 30.0% | |
| TATAATTCTGTTGGAACACT+AGG | - | chr1.1:24195235-24195254 | None:intergenic | 30.0% | |
| TATACTATGAATGTCACAAC+TGG | - | chr1.1:24197001-24197020 | None:intergenic | 30.0% | |
| TCTAATAATAGGGGTAAAAG+AGG | + | chr1.1:24198159-24198178 | MS.gene33308:intron | 30.0% | |
| TCTACAAAATGTTACTGTAC+TGG | + | chr1.1:24196896-24196915 | MS.gene33308:intron | 30.0% | |
| TCTTCTAACACTACTTCTTT+AGG | - | chr1.1:24195869-24195888 | None:intergenic | 30.0% | |
| TGAAAAAGAAAAGGATGAAG+CGG | + | chr1.1:24195346-24195365 | MS.gene33308:intron | 30.0% | |
| TGTATGAGAGACTTAATGTT+TGG | + | chr1.1:24198582-24198601 | MS.gene33308:intron | 30.0% | |
| TTAGAAATACACCCTCAATA+TGG | + | chr1.1:24194670-24194689 | MS.gene33308:intron | 30.0% | |
| TTTGTCAAACAACATGATGT+TGG | - | chr1.1:24197927-24197946 | None:intergenic | 30.0% | |
| ! | AACAGTTAGCTTAATGTGTT+TGG | + | chr1.1:24198654-24198673 | MS.gene33308:intron | 30.0% |
| ! | AACATTTAAAGCATAGTGGA+TGG | + | chr1.1:24198453-24198472 | MS.gene33308:intron | 30.0% |
| ! | AAGTACATTTTGCCTGAATA+AGG | + | chr1.1:24198059-24198078 | MS.gene33308:intron | 30.0% |
| ! | ATAATCTGCTTGCACAATTT+TGG | - | chr1.1:24194568-24194587 | None:intergenic | 30.0% |
| ! | TAATCAATTTAGGGTCTGTT+TGG | + | chr1.1:24195298-24195317 | MS.gene33308:intron | 30.0% |
| ! | TCCAAACTAATATTGACTGT+GGG | - | chr1.1:24197352-24197371 | None:intergenic | 30.0% |
| ! | TCTGAAATTGTAAGACATAG+CGG | + | chr1.1:24194495-24194514 | MS.gene33308:intron | 30.0% |
| ! | TCTGTGCATTATCTGTTTTA+AGG | - | chr1.1:24197256-24197275 | None:intergenic | 30.0% |
| ! | TGGTACACACTTTTGTAAAA+GGG | - | chr1.1:24195111-24195130 | None:intergenic | 30.0% |
| ! | TTGAGGGTGTATTTCTAAAA+CGG | - | chr1.1:24194668-24194687 | None:intergenic | 30.0% |
| ! | TTTAAAATGTTTCGTAGCAC+TGG | + | chr1.1:24194542-24194561 | MS.gene33308:intron | 30.0% |
| ! | TTTTCATGTTTGTCAAACAG+TGG | - | chr1.1:24197832-24197851 | None:intergenic | 30.0% |
| !! | ACATTTAAAGCATAGTGGAT+GGG | + | chr1.1:24198454-24198473 | MS.gene33308:intron | 30.0% |
| !! | ACGAAACATTTTAAAGAGAG+TGG | - | chr1.1:24194537-24194556 | None:intergenic | 30.0% |
| !! | AGTACTTACTCTGGAATAAT+CGG | + | chr1.1:24197756-24197775 | MS.gene33308:intron | 30.0% |
| !! | TAACTGTGTTGTTTAAGGTT+GGG | - | chr1.1:24194603-24194622 | None:intergenic | 30.0% |
| !! | TGATTGATAGCTCTAATTTG+TGG | + | chr1.1:24198904-24198923 | MS.gene33308:intron | 30.0% |
| !! | TTGGAAAAAAGTACTTACTC+TGG | + | chr1.1:24197747-24197766 | MS.gene33308:intron | 30.0% |
| !!! | TACTGTACTGGTTATTTTCA+GGG | + | chr1.1:24196908-24196927 | MS.gene33308:intron | 30.0% |
| !!! | TTACTGTACTGGTTATTTTC+AGG | + | chr1.1:24196907-24196926 | MS.gene33308:intron | 30.0% |
| AAAAAGAAAGAGAGAGAAGG+TGG | + | chr1.1:24194725-24194744 | MS.gene33308:intron | 35.0% | |
| AAACACCTAAATTCCCTGTT+TGG | + | chr1.1:24197388-24197407 | MS.gene33308:intron | 35.0% | |
| AACACCTAAATTCCCTGTTT+GGG | + | chr1.1:24197389-24197408 | MS.gene33308:intron | 35.0% | |
| AATTACAGCAAAGTGATACG+AGG | + | chr1.1:24197170-24197189 | MS.gene33308:intron | 35.0% | |
| ACCCACAGTCAATATTAGTT+TGG | + | chr1.1:24197348-24197367 | MS.gene33308:intron | 35.0% | |
| AGTTAGCACATGATGATTGA+TGG | + | chr1.1:24197627-24197646 | MS.gene33308:intron | 35.0% | |
| ATAGGTAGGAGCAATGATTT+AGG | + | chr1.1:24196038-24196057 | MS.gene33308:intron | 35.0% | |
| ATTAAGCGAGGAGCTAAAAT+CGG | + | chr1.1:24194844-24194863 | MS.gene33308:intron | 35.0% | |
| ATTCTTCTCCAAAGTTTGAG+AGG | + | chr1.1:24198721-24198740 | MS.gene33308:intron | 35.0% | |
| CAAGACCATTGTAGCTTATT+CGG | + | chr1.1:24194695-24194714 | MS.gene33308:intron | 35.0% | |
| CAAGTGTGATGTAATGTACA+TGG | + | chr1.1:24198268-24198287 | MS.gene33308:intron | 35.0% | |
| CAATTCATCGAACATGTAAG+GGG | - | chr1.1:24194461-24194480 | None:intergenic | 35.0% | |
| CACTAGTGTTTATATAGTGG+AGG | - | chr1.1:24195151-24195170 | None:intergenic | 35.0% | |
| CATTCAATCTATGCAGCAAA+AGG | + | chr1.1:24194398-24194417 | MS.gene33308:CDS | 35.0% | |
| CTCAAAATTGAAGGAAGATC+TGG | - | chr1.1:24196338-24196357 | None:intergenic | 35.0% | |
| CTCAATTTCCTCTCAAACTT+TGG | - | chr1.1:24198732-24198751 | None:intergenic | 35.0% | |
| CTTGCGAATAGAATTAACAG+TGG | - | chr1.1:24194325-24194344 | None:intergenic | 35.0% | |
| GAATTGCATATGTAGCTGAA+TGG | - | chr1.1:24198705-24198724 | None:intergenic | 35.0% | |
| GACAAAAAGAAAGAGAGAGA+AGG | + | chr1.1:24194722-24194741 | MS.gene33308:intron | 35.0% | |
| GACAATTCATCGAACATGTA+AGG | - | chr1.1:24194463-24194482 | None:intergenic | 35.0% | |
| GATGGTCTATAAAGCCATAT+GGG | + | chr1.1:24198994-24199013 | MS.gene33308:CDS | 35.0% | |
| GCGTTGAAATGAACAGATAT+TGG | + | chr1.1:24197685-24197704 | MS.gene33308:intron | 35.0% | |
| GTCTGTTTGGAAGTTTATGT+GGG | + | chr1.1:24195311-24195330 | MS.gene33308:intron | 35.0% | |
| GTTCATTTCAACGCTAGAAA+TGG | - | chr1.1:24197679-24197698 | None:intergenic | 35.0% | |
| GTTCCAACAGAATTATAAGG+AGG | + | chr1.1:24195238-24195257 | MS.gene33308:intron | 35.0% | |
| TACAGTGAATACAACGAAGT+AGG | - | chr1.1:24194641-24194660 | None:intergenic | 35.0% | |
| TACATGGAATAGTGACATTG+CGG | + | chr1.1:24198284-24198303 | MS.gene33308:intron | 35.0% | |
| TCTGTTTGGAAGTTTATGTG+GGG | + | chr1.1:24195312-24195331 | MS.gene33308:intron | 35.0% | |
| TGGATTCAAATCACACTATC+TGG | + | chr1.1:24197886-24197905 | MS.gene33308:intron | 35.0% | |
| TGTATATACATGCACACAGA+GGG | + | chr1.1:24196614-24196633 | MS.gene33308:intron | 35.0% | |
| TTACGGTAACAACAAATCCA+CGG | + | chr1.1:24194203-24194222 | MS.gene33308:CDS | 35.0% | |
| TTGTATATACATGCACACAG+AGG | + | chr1.1:24196613-24196632 | MS.gene33308:intron | 35.0% | |
| ! | ACTAATATTGACTGTGGGTA+AGG | - | chr1.1:24197347-24197366 | None:intergenic | 35.0% |
| ! | AGAATTATAAGGAGGCACAA+TGG | + | chr1.1:24195246-24195265 | MS.gene33308:intron | 35.0% |
| ! | AGTGTTTATATAGTGGAGGT+AGG | - | chr1.1:24195147-24195166 | None:intergenic | 35.0% |
| ! | ATTTGTTAGTACGGCTTTGA+GGG | - | chr1.1:24198196-24198215 | None:intergenic | 35.0% |
| ! | CAGATCTTCCTTCAATTTTG+AGG | + | chr1.1:24196336-24196355 | MS.gene33308:intron | 35.0% |
| ! | CTCCAAACTAATATTGACTG+TGG | - | chr1.1:24197353-24197372 | None:intergenic | 35.0% |
| ! | CTCTTCTATGTGAGACTTTT+AGG | + | chr1.1:24195182-24195201 | MS.gene33308:intron | 35.0% |
| ! | GTGGTACACACTTTTGTAAA+AGG | - | chr1.1:24195112-24195131 | None:intergenic | 35.0% |
| ! | TCATCAAAGCATCAAACTCT+AGG | - | chr1.1:24197055-24197074 | None:intergenic | 35.0% |
| ! | TTTGTCAAACAGTGGTGTTT+TGG | - | chr1.1:24197824-24197843 | None:intergenic | 35.0% |
| !! | AATGGTCTTGTACCATATTG+AGG | - | chr1.1:24194685-24194704 | None:intergenic | 35.0% |
| !! | ACTTGCTAGTTGTTGAGTTT+TGG | + | chr1.1:24194788-24194807 | MS.gene33308:intron | 35.0% |
| !! | ATGGTCTTGTACCATATTGA+GGG | - | chr1.1:24194684-24194703 | None:intergenic | 35.0% |
| !! | CGACTTGCTCTAAAAGATAA+AGG | + | chr1.1:24196469-24196488 | MS.gene33308:intron | 35.0% |
| !! | GCTAACTGTTATTTCATGAG+AGG | - | chr1.1:24198644-24198663 | None:intergenic | 35.0% |
| !! | GTAACTGTGTTGTTTAAGGT+TGG | - | chr1.1:24194604-24194623 | None:intergenic | 35.0% |
| !! | TAGTTGTTGAGTTTTGGTGT+AGG | + | chr1.1:24194794-24194813 | MS.gene33308:intron | 35.0% |
| !! | TTTGCTTTTACTTCCCACAA+GGG | - | chr1.1:24197714-24197733 | None:intergenic | 35.0% |
| !! | TTTTGCTTTTACTTCCCACA+AGG | - | chr1.1:24197715-24197734 | None:intergenic | 35.0% |
| AAAAGAGAGAAAGCAACCGT+TGG | + | chr1.1:24197112-24197131 | MS.gene33308:intron | 40.0% | |
| AAGTTATCCTTGACACCTTG+AGG | + | chr1.1:24198826-24198845 | MS.gene33308:intron | 40.0% | |
| AATAGAGGATTTCAGGAGCT+AGG | + | chr1.1:24195373-24195392 | MS.gene33308:intron | 40.0% | |
| ACCATTGTAGCTTATTCGGA+AGG | + | chr1.1:24194699-24194718 | MS.gene33308:intron | 40.0% | |
| AGAAAAGTCCTTGAAGAAGC+AGG | + | chr1.1:24197310-24197329 | MS.gene33308:intron | 40.0% | |
| AGAGCAGTTTAATTCCAGGT+TGG | - | chr1.1:24195811-24195830 | None:intergenic | 40.0% | |
| ATACTTCATCCTCCAACCAA+CGG | - | chr1.1:24197131-24197150 | None:intergenic | 40.0% | |
| ATAGAGGATTTCAGGAGCTA+GGG | + | chr1.1:24195374-24195393 | MS.gene33308:intron | 40.0% | |
| ATGATTACGAAAGAGAACCG+TGG | - | chr1.1:24194223-24194242 | None:intergenic | 40.0% | |
| ATGGTATGTTATGTCTGCAG+AGG | - | chr1.1:24197660-24197679 | None:intergenic | 40.0% | |
| ATTAATAGCCCAAGCCCAAA+TGG | + | chr1.1:24195051-24195070 | MS.gene33308:intron | 40.0% | |
| CAATAGCTAGGCTTGAATGT+TGG | + | chr1.1:24198226-24198245 | MS.gene33308:intron | 40.0% | |
| CACCGAGCTTATTATCTAGT+TGG | - | chr1.1:24198618-24198637 | None:intergenic | 40.0% | |
| CCATTGTAGCTTATTCGGAA+GGG | + | chr1.1:24194700-24194719 | MS.gene33308:intron | 40.0% | |
| CGCCTATTTAATGAGTAACG+CGG | + | chr1.1:24194922-24194941 | MS.gene33308:intron | 40.0% | |
| CGGAAGTAATAGAGGATTTC+AGG | + | chr1.1:24195366-24195385 | MS.gene33308:intron | 40.0% | |
| CTTATGCACGACATTTCCAA+AGG | - | chr1.1:24197797-24197816 | None:intergenic | 40.0% | |
| GAAGAGCTCTTTATTAAGCG+AGG | + | chr1.1:24194832-24194851 | MS.gene33308:intron | 40.0% | |
| GAGAAGAGCAGTTTAATTCC+AGG | - | chr1.1:24195815-24195834 | None:intergenic | 40.0% | |
| GAGCAGTTTAATTCCAGGTT+GGG | - | chr1.1:24195810-24195829 | None:intergenic | 40.0% | |
| GAGTATAAGAGCAGAAACAG+AGG | + | chr1.1:24195887-24195906 | MS.gene33308:intron | 40.0% | |
| GCCAAGAGTTAACTAATGGA+GGG | + | chr1.1:24194944-24194963 | MS.gene33308:intron | 40.0% | |
| GCTACTAATGTAAACGATGC+TGG | + | chr1.1:24194357-24194376 | MS.gene33308:CDS | 40.0% | |
| GGATGGTCTATAAAGCCATA+TGG | + | chr1.1:24198993-24199012 | MS.gene33308:CDS | 40.0% | |
| GGCAAAATGTACTTGCAAGA+AGG | - | chr1.1:24198053-24198072 | None:intergenic | 40.0% | |
| GGTCTGTTTGGAAGTTTATG+TGG | + | chr1.1:24195310-24195329 | MS.gene33308:intron | 40.0% | |
| GTAAAGGATGCTTATGGTGA+CGG | + | chr1.1:24196518-24196537 | MS.gene33308:CDS | 40.0% | |
| GTCTCTGTAAAGGATGCTTA+TGG | + | chr1.1:24196512-24196531 | MS.gene33308:CDS | 40.0% | |
| GTGCAAGCAGTCTTTATAGA+TGG | + | chr1.1:24197568-24197587 | MS.gene33308:intron | 40.0% | |
| GTGCCTCCTTATAATTCTGT+TGG | - | chr1.1:24195244-24195263 | None:intergenic | 40.0% | |
| TACATCACACTTGTGACTTC+AGG | - | chr1.1:24198261-24198280 | None:intergenic | 40.0% | |
| TCTCTAGCGTTGTGTGATTT+AGG | - | chr1.1:24195546-24195565 | None:intergenic | 40.0% | |
| TGCAGAAACAGTCTCTGTAA+AGG | + | chr1.1:24196502-24196521 | MS.gene33308:CDS | 40.0% | |
| TGCTGCATAGATTGAATGAG+AGG | - | chr1.1:24194396-24194415 | None:intergenic | 40.0% | |
| TTTGGAAGTTTATGTGGGGA+GGG | + | chr1.1:24195316-24195335 | MS.gene33308:intron | 40.0% | |
| ! | AATATTGACTGTGGGTAAGG+AGG | - | chr1.1:24197344-24197363 | None:intergenic | 40.0% |
| ! | ATATTGACTGTGGGTAAGGA+GGG | - | chr1.1:24197343-24197362 | None:intergenic | 40.0% |
| ! | ATTTGAAGTAGGGTCACCAT+GGG | + | chr1.1:24197422-24197441 | MS.gene33308:intron | 40.0% |
| ! | CATTTGTTAGTACGGCTTTG+AGG | - | chr1.1:24198197-24198216 | None:intergenic | 40.0% |
| ! | GAGAGAAGTAGTTTGTGAAG+TGG | - | chr1.1:24194262-24194281 | None:intergenic | 40.0% |
| ! | TAGTTTGTGAAGTGGATCTG+AGG | - | chr1.1:24194254-24194273 | None:intergenic | 40.0% |
| ! | TCGGTTTTTCGTTACCTTTG+TGG | + | chr1.1:24196584-24196603 | MS.gene33308:intron | 40.0% |
| ! | TGCCATGTGCATTTGAAGTA+GGG | + | chr1.1:24197412-24197431 | MS.gene33308:intron | 40.0% |
| ! | TTAATTCCAGGTTGGGAGTT+TGG | - | chr1.1:24195803-24195822 | None:intergenic | 40.0% |
| !! | ATAGCGGATGAATCACTACT+AGG | + | chr1.1:24194511-24194530 | MS.gene33308:intron | 40.0% |
| !! | ATTTTCAGGGCCACTTTCTA+TGG | + | chr1.1:24196921-24196940 | MS.gene33308:intron | 40.0% |
| !! | GTGGATTTGTTGTTACCGTA+AGG | - | chr1.1:24194204-24194223 | None:intergenic | 40.0% |
| !! | TTAGCTTTGCTATGCATAGC+TGG | - | chr1.1:24195636-24195655 | None:intergenic | 40.0% |
| !! | TTGCTTTTACTTCCCACAAG+GGG | - | chr1.1:24197713-24197732 | None:intergenic | 40.0% |
| AAACATGGAACAGTGCCTCA+AGG | - | chr1.1:24198844-24198863 | None:intergenic | 45.0% | |
| AAGAGCTTTGCGGAGTAAAG+TGG | - | chr1.1:24194166-24194185 | None:intergenic | 45.0% | |
| AATCAGCCGTGAATAGGCAA+AGG | + | chr1.1:24198972-24198991 | MS.gene33308:CDS | 45.0% | |
| ACCGTAAGGTCGAACCAAAA+CGG | - | chr1.1:24194190-24194209 | None:intergenic | 45.0% | |
| AGTTGTACGCTGTTGTGAGT+AGG | - | chr1.1:24196391-24196410 | None:intergenic | 45.0% | |
| ATTTCAGGAGCTAGGGTTTG+GGG | + | chr1.1:24195381-24195400 | MS.gene33308:intron | 45.0% | |
| CACTTTCTATGGCTGACTGA+AGG | + | chr1.1:24196932-24196951 | MS.gene33308:intron | 45.0% | |
| CCCTTCCGAATAAGCTACAA+TGG | - | chr1.1:24194703-24194722 | None:intergenic | 45.0% | |
| CGTTGTGTGATTTAGGTAGC+TGG | - | chr1.1:24195539-24195558 | None:intergenic | 45.0% | |
| CTTCAGTCAGCCATAGAAAG+TGG | - | chr1.1:24196934-24196953 | None:intergenic | 45.0% | |
| GAATATCGCCTGCTTCTTCA+AGG | - | chr1.1:24197321-24197340 | None:intergenic | 45.0% | |
| GACCATCCTTTGCCTATTCA+CGG | - | chr1.1:24198981-24199000 | None:intergenic | 45.0% | |
| GACCCTACTTCAAATGCACA+TGG | - | chr1.1:24197417-24197436 | None:intergenic | 45.0% | |
| GATTTCAGGAGCTAGGGTTT+GGG | + | chr1.1:24195380-24195399 | MS.gene33308:intron | 45.0% | |
| GCATATGTAGCTGAATGGTG+AGG | - | chr1.1:24198700-24198719 | None:intergenic | 45.0% | |
| GCCCTCCATTAGTTAACTCT+TGG | - | chr1.1:24194948-24194967 | None:intergenic | 45.0% | |
| GCTGAATGGTGAGGAATAAG+CGG | - | chr1.1:24198691-24198710 | None:intergenic | 45.0% | |
| GGATGAAGCGGAAGTAATAG+AGG | + | chr1.1:24195358-24195377 | MS.gene33308:intron | 45.0% | |
| GGCCAAGAGTTAACTAATGG+AGG | + | chr1.1:24194943-24194962 | MS.gene33308:intron | 45.0% | |
| GGCCGCGTTACTCATTAAAT+AGG | - | chr1.1:24194927-24194946 | None:intergenic | 45.0% | |
| GGGAGGGCTTGAAAAAGAAA+AGG | + | chr1.1:24195337-24195356 | MS.gene33308:intron | 45.0% | |
| GGTACACGTAAGCATGCATT+TGG | - | chr1.1:24194986-24195005 | None:intergenic | 45.0% | |
| GGTCTATAAAGCCATATGGG+AGG | + | chr1.1:24198997-24199016 | MS.gene33308:CDS | 45.0% | |
| GTGTGATTTAGGTAGCTGGT+GGG | - | chr1.1:24195535-24195554 | None:intergenic | 45.0% | |
| GTTTGGAAGTTTATGTGGGG+AGG | + | chr1.1:24195315-24195334 | MS.gene33308:intron | 45.0% | |
| TGGTGTAGGTAGAGAAGTGA+GGG | + | chr1.1:24194808-24194827 | MS.gene33308:intron | 45.0% | |
| TGTGTGATTTAGGTAGCTGG+TGG | - | chr1.1:24195536-24195555 | None:intergenic | 45.0% | |
| TTGAGTTTGAGCTTGACCCA+TGG | - | chr1.1:24197441-24197460 | None:intergenic | 45.0% | |
| TTGCGGCGTGATTGAACAAA+TGG | + | chr1.1:24198301-24198320 | MS.gene33308:intron | 45.0% | |
| TTGGAAGTTTATGTGGGGAG+GGG | + | chr1.1:24195317-24195336 | MS.gene33308:intron | 45.0% | |
| TTGGTGTAGGTAGAGAAGTG+AGG | + | chr1.1:24194807-24194826 | MS.gene33308:intron | 45.0% | |
| TTTAGGTAGCTGGTGGGATA+AGG | - | chr1.1:24195529-24195548 | None:intergenic | 45.0% | |
| ! | AAAAGTGTGTACCACACCCT+CGG | + | chr1.1:24195117-24195136 | MS.gene33308:intron | 45.0% |
| ! | CATTTGAAGTAGGGTCACCA+TGG | + | chr1.1:24197421-24197440 | MS.gene33308:intron | 45.0% |
| ! | GTGCCATGTGCATTTGAAGT+AGG | + | chr1.1:24197411-24197430 | MS.gene33308:intron | 45.0% |
| !! | AGCATAGTGGATGGGATGAA+AGG | + | chr1.1:24198462-24198481 | MS.gene33308:intron | 45.0% |
| AAAGTGTGTACCACACCCTC+GGG | + | chr1.1:24195118-24195137 | MS.gene33308:intron | 50.0% | |
| AAGCCCAAATGGTGCGTGTA+TGG | + | chr1.1:24195062-24195081 | MS.gene33308:intron | 50.0% | |
| AAGTTTATGTGGGGAGGGGA+GGG | + | chr1.1:24195321-24195340 | MS.gene33308:intron | 50.0% | |
| AATGCACATGGCACCCAAAC+AGG | - | chr1.1:24197405-24197424 | None:intergenic | 50.0% | |
| ACAACCCTCTCCTGTTAACC+GGG | + | chr1.1:24195602-24195621 | MS.gene33308:intron | 50.0% | |
| ACAGATATTGGCACCCCTTG+TGG | + | chr1.1:24197697-24197716 | MS.gene33308:intron | 50.0% | |
| AGCACCATACACGCACCATT+TGG | - | chr1.1:24195069-24195088 | None:intergenic | 50.0% | |
| AGCCGTGAATAGGCAAAGGA+TGG | + | chr1.1:24198976-24198995 | MS.gene33308:CDS | 50.0% | |
| AGCTTTGCGGAGTAAAGTGG+TGG | - | chr1.1:24194163-24194182 | None:intergenic | 50.0% | |
| AGGGACAATCAGCCGTGAAT+AGG | + | chr1.1:24198966-24198985 | MS.gene33308:CDS | 50.0% | |
| ATACACGCACCATTTGGGCT+TGG | - | chr1.1:24195063-24195082 | None:intergenic | 50.0% | |
| ATGCACATGGCACCCAAACA+GGG | - | chr1.1:24197404-24197423 | None:intergenic | 50.0% | |
| CACAACCCTCTCCTGTTAAC+CGG | + | chr1.1:24195601-24195620 | MS.gene33308:intron | 50.0% | |
| CAGATATTGGCACCCCTTGT+GGG | + | chr1.1:24197698-24197717 | MS.gene33308:intron | 50.0% | |
| CCAAAACGGGAAGAGCTTTG+CGG | - | chr1.1:24194176-24194195 | None:intergenic | 50.0% | |
| CCGTAAGGTCGAACCAAAAC+GGG | - | chr1.1:24194189-24194208 | None:intergenic | 50.0% | |
| CGCGGCCAAGAGTTAACTAA+TGG | + | chr1.1:24194940-24194959 | MS.gene33308:intron | 50.0% | |
| GAAAGAGAGAGAAGGTGGCT+TGG | + | chr1.1:24194730-24194749 | MS.gene33308:intron | 50.0% | |
| GAGAGAAAGCAACCGTTGGT+TGG | + | chr1.1:24197116-24197135 | MS.gene33308:intron | 50.0% | |
| GAGAGGGTTGTGTTAGACCT+CGG | - | chr1.1:24195593-24195612 | None:intergenic | 50.0% | |
| GCACCATACACGCACCATTT+GGG | - | chr1.1:24195068-24195087 | None:intergenic | 50.0% | |
| GCTTTGCGGAGTAAAGTGGT+GGG | - | chr1.1:24194162-24194181 | None:intergenic | 50.0% | |
| GGATTTCAGGAGCTAGGGTT+TGG | + | chr1.1:24195379-24195398 | MS.gene33308:intron | 50.0% | |
| GGCACCCAAACAGGGAATTT+AGG | - | chr1.1:24197396-24197415 | None:intergenic | 50.0% | |
| TAACTAATGGAGGGCTCGTG+CGG | + | chr1.1:24194953-24194972 | MS.gene33308:intron | 50.0% | |
| TACACGCACCATTTGGGCTT+GGG | - | chr1.1:24195062-24195081 | None:intergenic | 50.0% | |
| TTTCAGGAGCTAGGGTTTGG+GGG | + | chr1.1:24195382-24195401 | MS.gene33308:intron | 50.0% | |
| TTTGGAGGGAGGGAATTGGA+GGG | - | chr1.1:24195785-24195804 | None:intergenic | 50.0% | |
| ! | AACAGTGCCTCAAGGTGTCA+AGG | - | chr1.1:24198836-24198855 | None:intergenic | 50.0% |
| ! | AAGTTTTACGTTGACCGCCG+AGG | + | chr1.1:24195573-24195592 | MS.gene33308:intron | 50.0% |
| ! | AGAAAGCAACCGTTGGTTGG+AGG | + | chr1.1:24197119-24197138 | MS.gene33308:intron | 50.0% |
| ! | ATTCCAGGTTGGGAGTTTGG+AGG | - | chr1.1:24195800-24195819 | None:intergenic | 50.0% |
| ! | GTTGTATCGACAGCCTTCGA+GGG | + | chr1.1:24198947-24198966 | MS.gene33308:CDS | 50.0% |
| ! | TGTTGTATCGACAGCCTTCG+AGG | + | chr1.1:24198946-24198965 | MS.gene33308:CDS | 50.0% |
| ! | TGTTTAAGGTTGGGACGTCG+TGG | - | chr1.1:24194594-24194613 | None:intergenic | 50.0% |
| ! | TTCCAGGTTGGGAGTTTGGA+GGG | - | chr1.1:24195799-24195818 | None:intergenic | 50.0% |
| !! | ACTCTGAAGCTCCTCCCATA+TGG | - | chr1.1:24199011-24199030 | None:intergenic | 50.0% |
| !!! | CCCGTTTTGGTTCGACCTTA+CGG | + | chr1.1:24194186-24194205 | MS.gene33308:CDS | 50.0% |
| AACTAATGGAGGGCTCGTGC+GGG | + | chr1.1:24194954-24194973 | MS.gene33308:intron | 55.0% | |
| AAGGCCCGGTTAACAGGAGA+GGG | - | chr1.1:24195609-24195628 | None:intergenic | 55.0% | |
| AGGGTTGTGTTAGACCTCGG+CGG | - | chr1.1:24195590-24195609 | None:intergenic | 55.0% | |
| AGGTTGGGAGTTTGGAGGGA+GGG | - | chr1.1:24195795-24195814 | None:intergenic | 55.0% | |
| GAAGTTTATGTGGGGAGGGG+AGG | + | chr1.1:24195320-24195339 | MS.gene33308:intron | 55.0% | |
| GCTATGCATAGCTGGTCCCA+AGG | - | chr1.1:24195628-24195647 | None:intergenic | 55.0% | |
| GGAGTTTGGAGGGAGGGAAT+TGG | - | chr1.1:24195789-24195808 | None:intergenic | 55.0% | |
| GTAGCTGGTGGGATAAGGCT+TGG | - | chr1.1:24195524-24195543 | None:intergenic | 55.0% | |
| GTTTGGAGGGAGGGAATTGG+AGG | - | chr1.1:24195786-24195805 | None:intergenic | 55.0% | |
| TCTCCTGTTAACCGGGCCTT+GGG | + | chr1.1:24195609-24195628 | MS.gene33308:intron | 55.0% | |
| ! | CCGCAAAGCTCTTCCCGTTT+TGG | + | chr1.1:24194173-24194192 | MS.gene33308:CDS | 55.0% |
| ! | GGCTGCTTCAGCAGGAGTTT+TGG | - | chr1.1:24199062-24199081 | None:intergenic | 55.0% |
| !! | ATGGTGACGGACGCCATGTT+AGG | + | chr1.1:24196531-24196550 | MS.gene33308:CDS | 55.0% |
| AGTGGAGGTAGGACTCCCGA+GGG | - | chr1.1:24195136-24195155 | None:intergenic | 60.0% | |
| CAAGGCCCGGTTAACAGGAG+AGG | - | chr1.1:24195610-24195629 | None:intergenic | 60.0% | |
| CACGGCTGATTGTCCCTCGA+AGG | - | chr1.1:24198963-24198982 | None:intergenic | 60.0% | |
| CTCCCTCCAAACTCCCAACC+TGG | + | chr1.1:24195794-24195813 | MS.gene33308:intron | 60.0% | |
| CTCTCCTGTTAACCGGGCCT+TGG | + | chr1.1:24195608-24195627 | MS.gene33308:intron | 60.0% | |
| TAGTGGAGGTAGGACTCCCG+AGG | - | chr1.1:24195137-24195156 | None:intergenic | 60.0% | |
| ! | CAGGTTGGGAGTTTGGAGGG+AGG | - | chr1.1:24195796-24195815 | None:intergenic | 60.0% |
| ACTCCTGCTGAAGCAGCCGC+CGG | + | chr1.1:24199064-24199083 | MS.gene33308:CDS | 65.0% | |
| AGGTAGGACTCCCGAGGGTG+TGG | - | chr1.1:24195131-24195150 | None:intergenic | 65.0% | |
| GCATAGCTGGTCCCAAGGCC+CGG | - | chr1.1:24195623-24195642 | None:intergenic | 65.0% | |
| GGTCCCAAGGCCCGGTTAAC+AGG | - | chr1.1:24195615-24195634 | None:intergenic | 65.0% | |
| CTCCTGCTGAAGCAGCCGCC+GGG | + | chr1.1:24199065-24199084 | MS.gene33308:CDS | 70.0% | |
| TTCCCGGCGGCTGCTTCAGC+AGG | - | chr1.1:24199070-24199089 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 24194129 | 24199093 | 24194129 | ID=MS.gene33308 |
| chr1.1 | mRNA | 24194129 | 24199093 | 24194129 | ID=MS.gene33308.t1;Parent=MS.gene33308 |
| chr1.1 | exon | 24194129 | 24194419 | 24194129 | ID=MS.gene33308.t1.exon1;Parent=MS.gene33308.t1 |
| chr1.1 | CDS | 24194129 | 24194419 | 24194129 | ID=cds.MS.gene33308.t1;Parent=MS.gene33308.t1 |
| chr1.1 | exon | 24196485 | 24196552 | 24196485 | ID=MS.gene33308.t1.exon2;Parent=MS.gene33308.t1 |
| chr1.1 | CDS | 24196485 | 24196552 | 24196485 | ID=cds.MS.gene33308.t1;Parent=MS.gene33308.t1 |
| chr1.1 | exon | 24198940 | 24199093 | 24198940 | ID=MS.gene33308.t1.exon3;Parent=MS.gene33308.t1 |
| chr1.1 | CDS | 24198940 | 24199093 | 24198940 | ID=cds.MS.gene33308.t1;Parent=MS.gene33308.t1 |
| Gene Sequence |
| Protein sequence |
