Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68242.t1 | XP_013455455.1 | 92.2 | 359 | 22 | 1 | 1 | 353 | 74 | 432 | 4.50E-193 | 684.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68242.t1 | Q8CWK7 | 44.9 | 301 | 141 | 10 | 1 | 290 | 12 | 298 | 4.1e-62 | 240.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68242.t1 | A0A072UJ85 | 92.2 | 359 | 22 | 1 | 1 | 353 | 74 | 432 | 3.2e-193 | 684.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene68242 | 0.80244 | 5.60E-49 | -1.69E-46 |
| MS.gene049346 | MS.gene68242 | 0.813164 | 2.94E-51 | -1.69E-46 |
| MS.gene049351 | MS.gene68242 | 0.872614 | 2.78E-67 | -1.69E-46 |
| MS.gene049356 | MS.gene68242 | 0.810584 | 1.07E-50 | -1.69E-46 |
| MS.gene049389 | MS.gene68242 | 0.806309 | 8.76E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene68242 | 0.810903 | 9.15E-51 | -1.69E-46 |
| MS.gene049491 | MS.gene68242 | 0.820965 | 5.19E-53 | -1.69E-46 |
| MS.gene049661 | MS.gene68242 | 0.883949 | 2.91E-71 | -1.69E-46 |
| MS.gene049662 | MS.gene68242 | 0.880074 | 7.40E-70 | -1.69E-46 |
| MS.gene049758 | MS.gene68242 | 0.879431 | 1.25E-69 | -1.69E-46 |
| MS.gene049760 | MS.gene68242 | 0.825988 | 3.47E-54 | -1.69E-46 |
| MS.gene050076 | MS.gene68242 | 0.880653 | 4.60E-70 | -1.69E-46 |
| MS.gene050099 | MS.gene68242 | 0.847082 | 1.45E-59 | -1.69E-46 |
| MS.gene050128 | MS.gene68242 | 0.837494 | 5.03E-57 | -1.69E-46 |
| MS.gene050301 | MS.gene68242 | 0.875373 | 3.24E-68 | -1.69E-46 |
| MS.gene050397 | MS.gene68242 | 0.853679 | 2.04E-61 | -1.69E-46 |
| MS.gene050404 | MS.gene68242 | 0.802103 | 6.58E-49 | -1.69E-46 |
| MS.gene050406 | MS.gene68242 | 0.818483 | 1.91E-52 | -1.69E-46 |
| MS.gene050432 | MS.gene68242 | 0.889119 | 3.22E-73 | -1.69E-46 |
| MS.gene050464 | MS.gene68242 | 0.82947 | 5.06E-55 | -1.69E-46 |
| MS.gene050529 | MS.gene68242 | 0.851389 | 9.16E-61 | -1.69E-46 |
| MS.gene050670 | MS.gene68242 | 0.838443 | 2.87E-57 | -1.69E-46 |
| MS.gene050767 | MS.gene68242 | 0.863311 | 2.73E-64 | -1.69E-46 |
| MS.gene050770 | MS.gene68242 | 0.865441 | 5.89E-65 | -1.69E-46 |
| MS.gene050783 | MS.gene68242 | 0.800088 | 1.70E-48 | -1.69E-46 |
| MS.gene05101 | MS.gene68242 | 0.878511 | 2.65E-69 | -1.69E-46 |
| MS.gene05105 | MS.gene68242 | 0.843133 | 1.69E-58 | -1.69E-46 |
| MS.gene051255 | MS.gene68242 | 0.820114 | 8.14E-53 | -1.69E-46 |
| MS.gene051471 | MS.gene68242 | 0.857349 | 1.73E-62 | -1.69E-46 |
| MS.gene051582 | MS.gene68242 | 0.807627 | 4.61E-50 | -1.69E-46 |
| MS.gene051663 | MS.gene68242 | 0.805098 | 1.57E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene68242 | 0.812156 | 4.89E-51 | -1.69E-46 |
| MS.gene051692 | MS.gene68242 | 0.818151 | 2.28E-52 | -1.69E-46 |
| MS.gene051860 | MS.gene68242 | 0.801792 | 7.62E-49 | -1.69E-46 |
| MS.gene051877 | MS.gene68242 | 0.855453 | 6.25E-62 | -1.69E-46 |
| MS.gene052078 | MS.gene68242 | 0.909608 | 4.72E-82 | -1.69E-46 |
| MS.gene052178 | MS.gene68242 | 0.847704 | 9.77E-60 | -1.69E-46 |
| MS.gene052188 | MS.gene68242 | 0.86516 | 7.22E-65 | -1.69E-46 |
| MS.gene052207 | MS.gene68242 | 0.811404 | 7.12E-51 | -1.69E-46 |
| MS.gene052253 | MS.gene68242 | 0.838312 | 3.10E-57 | -1.69E-46 |
| MS.gene052287 | MS.gene68242 | 0.816553 | 5.21E-52 | -1.69E-46 |
| MS.gene052290 | MS.gene68242 | 0.826834 | 2.18E-54 | -1.69E-46 |
| MS.gene052310 | MS.gene68242 | 0.872242 | 3.70E-67 | -1.69E-46 |
| MS.gene052322 | MS.gene68242 | 0.838527 | 2.73E-57 | -1.69E-46 |
| MS.gene052326 | MS.gene68242 | 0.870805 | 1.11E-66 | -1.69E-46 |
| MS.gene052340 | MS.gene68242 | 0.85425 | 1.39E-61 | -1.69E-46 |
| MS.gene052421 | MS.gene68242 | 0.807145 | 5.83E-50 | -1.69E-46 |
| MS.gene052481 | MS.gene68242 | 0.81471 | 1.34E-51 | -1.69E-46 |
| MS.gene052484 | MS.gene68242 | 0.832583 | 8.70E-56 | -1.69E-46 |
| MS.gene052485 | MS.gene68242 | 0.841259 | 5.30E-58 | -1.69E-46 |
| MS.gene052508 | MS.gene68242 | 0.801166 | 1.02E-48 | -1.69E-46 |
| MS.gene053009 | MS.gene68242 | 0.822173 | 2.73E-53 | -1.69E-46 |
| MS.gene053103 | MS.gene68242 | 0.823511 | 1.33E-53 | -1.69E-46 |
| MS.gene053104 | MS.gene68242 | 0.81839 | 2.01E-52 | -1.69E-46 |
| MS.gene053207 | MS.gene68242 | 0.805191 | 1.50E-49 | -1.69E-46 |
| MS.gene053209 | MS.gene68242 | 0.897979 | 8.31E-77 | -1.69E-46 |
| MS.gene053322 | MS.gene68242 | 0.841664 | 4.14E-58 | -1.69E-46 |
| MS.gene053557 | MS.gene68242 | 0.818177 | 2.25E-52 | -1.69E-46 |
| MS.gene053813 | MS.gene68242 | 0.812162 | 4.87E-51 | -1.69E-46 |
| MS.gene053836 | MS.gene68242 | 0.8672 | 1.63E-65 | -1.69E-46 |
| MS.gene053928 | MS.gene68242 | 0.826933 | 2.07E-54 | -1.69E-46 |
| MS.gene054011 | MS.gene68242 | 0.813875 | 2.05E-51 | -1.69E-46 |
| MS.gene054123 | MS.gene68242 | 0.85381 | 1.87E-61 | -1.69E-46 |
| MS.gene054376 | MS.gene68242 | 0.871789 | 5.23E-67 | -1.69E-46 |
| MS.gene054473 | MS.gene68242 | 0.81653 | 5.27E-52 | -1.69E-46 |
| MS.gene05455 | MS.gene68242 | 0.823175 | 1.60E-53 | -1.69E-46 |
| MS.gene054802 | MS.gene68242 | 0.855638 | 5.51E-62 | -1.69E-46 |
| MS.gene054803 | MS.gene68242 | 0.854114 | 1.53E-61 | -1.69E-46 |
| MS.gene054804 | MS.gene68242 | 0.859084 | 5.28E-63 | -1.69E-46 |
| MS.gene054955 | MS.gene68242 | 0.82706 | 1.93E-54 | -1.69E-46 |
| MS.gene05505 | MS.gene68242 | 0.807899 | 4.03E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene68242 | 0.869893 | 2.20E-66 | -1.69E-46 |
| MS.gene055254 | MS.gene68242 | 0.871652 | 5.80E-67 | -1.69E-46 |
| MS.gene055277 | MS.gene68242 | 0.906161 | 1.99E-80 | -1.69E-46 |
| MS.gene055390 | MS.gene68242 | 0.880533 | 5.08E-70 | -1.69E-46 |
| MS.gene055397 | MS.gene68242 | 0.832051 | 1.18E-55 | -1.69E-46 |
| MS.gene055422 | MS.gene68242 | 0.89418 | 3.14E-75 | -1.69E-46 |
| MS.gene055428 | MS.gene68242 | 0.871586 | 6.11E-67 | -1.69E-46 |
| MS.gene055499 | MS.gene68242 | 0.837635 | 4.63E-57 | -1.69E-46 |
| MS.gene055564 | MS.gene68242 | 0.810075 | 1.38E-50 | -1.69E-46 |
| MS.gene055604 | MS.gene68242 | 0.836192 | 1.08E-56 | -1.69E-46 |
| MS.gene055712 | MS.gene68242 | 0.853332 | 2.56E-61 | -1.69E-46 |
| MS.gene055896 | MS.gene68242 | 0.810291 | 1.24E-50 | -1.69E-46 |
| MS.gene05592 | MS.gene68242 | 0.836353 | 9.84E-57 | -1.69E-46 |
| MS.gene05602 | MS.gene68242 | 0.850447 | 1.69E-60 | -1.69E-46 |
| MS.gene056191 | MS.gene68242 | 0.858282 | 9.17E-63 | -1.69E-46 |
| MS.gene056407 | MS.gene68242 | 0.869626 | 2.69E-66 | -1.69E-46 |
| MS.gene056410 | MS.gene68242 | 0.854973 | 8.61E-62 | -1.69E-46 |
| MS.gene056497 | MS.gene68242 | 0.803222 | 3.86E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene68242 | 0.875577 | 2.76E-68 | -1.69E-46 |
| MS.gene056612 | MS.gene68242 | 0.854672 | 1.05E-61 | -1.69E-46 |
| MS.gene056659 | MS.gene68242 | 0.803905 | 2.79E-49 | -1.69E-46 |
| MS.gene056796 | MS.gene68242 | 0.842274 | 2.86E-58 | -1.69E-46 |
| MS.gene056902 | MS.gene68242 | 0.801463 | 8.90E-49 | -1.69E-46 |
| MS.gene056931 | MS.gene68242 | 0.801311 | 9.56E-49 | -1.69E-46 |
| MS.gene056933 | MS.gene68242 | 0.800449 | 1.43E-48 | -1.69E-46 |
| MS.gene057011 | MS.gene68242 | 0.809885 | 1.52E-50 | -1.69E-46 |
| MS.gene05702 | MS.gene68242 | 0.865657 | 5.04E-65 | -1.69E-46 |
| MS.gene057121 | MS.gene68242 | 0.81761 | 3.02E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene68242 | 0.849104 | 4.00E-60 | -1.69E-46 |
| MS.gene057129 | MS.gene68242 | 0.860364 | 2.17E-63 | -1.69E-46 |
| MS.gene057245 | MS.gene68242 | 0.813345 | 2.68E-51 | -1.69E-46 |
| MS.gene057295 | MS.gene68242 | 0.879671 | 1.03E-69 | -1.69E-46 |
| MS.gene05733 | MS.gene68242 | 0.824766 | 6.76E-54 | -1.69E-46 |
| MS.gene05735 | MS.gene68242 | 0.817433 | 3.31E-52 | -1.69E-46 |
| MS.gene057439 | MS.gene68242 | 0.858191 | 9.76E-63 | -1.69E-46 |
| MS.gene057448 | MS.gene68242 | 0.845773 | 3.29E-59 | -1.69E-46 |
| MS.gene057449 | MS.gene68242 | 0.831037 | 2.10E-55 | -1.69E-46 |
| MS.gene057450 | MS.gene68242 | 0.85428 | 1.37E-61 | -1.69E-46 |
| MS.gene057749 | MS.gene68242 | 0.830513 | 2.82E-55 | -1.69E-46 |
| MS.gene057796 | MS.gene68242 | 0.822854 | 1.90E-53 | -1.69E-46 |
| MS.gene057823 | MS.gene68242 | 0.830365 | 3.06E-55 | -1.69E-46 |
| MS.gene058002 | MS.gene68242 | 0.869098 | 3.99E-66 | -1.69E-46 |
| MS.gene058006 | MS.gene68242 | 0.825991 | 3.47E-54 | -1.69E-46 |
| MS.gene058019 | MS.gene68242 | 0.813129 | 2.99E-51 | -1.69E-46 |
| MS.gene058082 | MS.gene68242 | 0.884051 | 2.67E-71 | -1.69E-46 |
| MS.gene05811 | MS.gene68242 | 0.85774 | 1.33E-62 | -1.69E-46 |
| MS.gene058233 | MS.gene68242 | 0.838088 | 3.54E-57 | -1.69E-46 |
| MS.gene058276 | MS.gene68242 | 0.801086 | 1.06E-48 | -1.69E-46 |
| MS.gene058293 | MS.gene68242 | 0.902192 | 1.25E-78 | -1.69E-46 |
| MS.gene058323 | MS.gene68242 | 0.820406 | 6.97E-53 | -1.69E-46 |
| MS.gene058365 | MS.gene68242 | 0.856686 | 2.72E-62 | -1.69E-46 |
| MS.gene058660 | MS.gene68242 | 0.896004 | 5.59E-76 | -1.69E-46 |
| MS.gene058748 | MS.gene68242 | 0.803639 | 3.17E-49 | -1.69E-46 |
| MS.gene058787 | MS.gene68242 | 0.876819 | 1.03E-68 | -1.69E-46 |
| MS.gene058845 | MS.gene68242 | 0.815933 | 7.17E-52 | -1.69E-46 |
| MS.gene05886 | MS.gene68242 | 0.814755 | 1.31E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene68242 | 0.829773 | 4.27E-55 | -1.69E-46 |
| MS.gene058993 | MS.gene68242 | 0.841418 | 4.81E-58 | -1.69E-46 |
| MS.gene05907 | MS.gene68242 | 0.850811 | 1.33E-60 | -1.69E-46 |
| MS.gene059228 | MS.gene68242 | 0.81575 | 7.88E-52 | -1.69E-46 |
| MS.gene059294 | MS.gene68242 | 0.825994 | 3.46E-54 | -1.69E-46 |
| MS.gene059326 | MS.gene68242 | 0.845803 | 3.23E-59 | -1.69E-46 |
| MS.gene059342 | MS.gene68242 | 0.8189 | 1.54E-52 | -1.69E-46 |
| MS.gene059366 | MS.gene68242 | 0.808519 | 2.98E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene68242 | 0.801475 | 8.85E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene68242 | 0.853714 | 1.99E-61 | -1.69E-46 |
| MS.gene059536 | MS.gene68242 | 0.82573 | 4.00E-54 | -1.69E-46 |
| MS.gene059597 | MS.gene68242 | 0.851091 | 1.11E-60 | -1.69E-46 |
| MS.gene05959 | MS.gene68242 | 0.808769 | 2.63E-50 | -1.69E-46 |
| MS.gene059676 | MS.gene68242 | 0.860966 | 1.43E-63 | -1.69E-46 |
| MS.gene059688 | MS.gene68242 | 0.872662 | 2.68E-67 | -1.69E-46 |
| MS.gene059692 | MS.gene68242 | 0.893703 | 4.91E-75 | -1.69E-46 |
| MS.gene059695 | MS.gene68242 | 0.891864 | 2.69E-74 | -1.69E-46 |
| MS.gene059708 | MS.gene68242 | 0.831603 | 1.52E-55 | -1.69E-46 |
| MS.gene059711 | MS.gene68242 | 0.803248 | 3.82E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene68242 | 0.846236 | 2.47E-59 | -1.69E-46 |
| MS.gene059894 | MS.gene68242 | 0.862273 | 5.70E-64 | -1.69E-46 |
| MS.gene059960 | MS.gene68242 | 0.841418 | 4.81E-58 | -1.69E-46 |
| MS.gene059974 | MS.gene68242 | 0.83395 | 3.97E-56 | -1.69E-46 |
| MS.gene060005 | MS.gene68242 | 0.843083 | 1.74E-58 | -1.69E-46 |
| MS.gene06037 | MS.gene68242 | 0.902098 | 1.37E-78 | -1.69E-46 |
| MS.gene060403 | MS.gene68242 | 0.825401 | 4.78E-54 | -1.69E-46 |
| MS.gene060407 | MS.gene68242 | 0.807997 | 3.85E-50 | -1.69E-46 |
| MS.gene060804 | MS.gene68242 | 0.840402 | 8.88E-58 | -1.69E-46 |
| MS.gene060818 | MS.gene68242 | 0.817895 | 2.60E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene68242 | 0.808875 | 2.50E-50 | -1.69E-46 |
| MS.gene061041 | MS.gene68242 | 0.814363 | 1.60E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene68242 | 0.883731 | 3.50E-71 | -1.69E-46 |
| MS.gene061051 | MS.gene68242 | -0.855363 | 6.64E-62 | -1.69E-46 |
| MS.gene061112 | MS.gene68242 | 0.801471 | 8.87E-49 | -1.69E-46 |
| MS.gene061154 | MS.gene68242 | 0.815549 | 8.73E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene68242 | 0.837812 | 4.17E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68242.t1 | MTR_4g037515 | 92.222 | 360 | 20 | 2 | 1 | 353 | 74 | 432 | 0.0 | 695 |
| MS.gene68242.t1 | MTR_3g030890 | 77.465 | 355 | 72 | 2 | 1 | 348 | 16 | 369 | 0.0 | 574 |
| MS.gene68242.t1 | MTR_4g037505 | 97.222 | 108 | 2 | 1 | 355 | 461 | 1 | 108 | 2.62e-66 | 208 |
| MS.gene68242.t1 | MTR_3g030850 | 71.028 | 107 | 28 | 3 | 355 | 460 | 1 | 105 | 1.21e-38 | 136 |
| MS.gene68242.t1 | MTR_3g030860 | 69.444 | 108 | 29 | 4 | 355 | 461 | 1 | 105 | 1.37e-30 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68242.t1 | AT3G63510 | 71.191 | 361 | 96 | 3 | 1 | 353 | 59 | 419 | 0.0 | 538 |
| MS.gene68242.t1 | AT5G47970 | 70.455 | 352 | 95 | 3 | 1 | 344 | 17 | 367 | 0.0 | 528 |
| MS.gene68242.t1 | AT5G47970 | 70.455 | 352 | 95 | 3 | 1 | 344 | 17 | 367 | 0.0 | 528 |
| MS.gene68242.t1 | AT3G63510 | 70.588 | 357 | 97 | 3 | 5 | 353 | 30 | 386 | 0.0 | 526 |
| MS.gene68242.t1 | AT5G47970 | 75.000 | 256 | 56 | 2 | 1 | 249 | 17 | 271 | 4.55e-142 | 408 |
| MS.gene68242.t1 | AT1G51400 | 49.541 | 109 | 48 | 3 | 355 | 460 | 1 | 105 | 2.38e-20 | 86.3 |
| MS.gene68242.t1 | AT3G21055 | 44.853 | 136 | 60 | 5 | 334 | 461 | 15 | 143 | 2.51e-19 | 84.7 |
| MS.gene68242.t1 | AT3G21055 | 50.000 | 110 | 45 | 4 | 355 | 461 | 1 | 103 | 1.52e-18 | 81.3 |
Find 113 sgRNAs with CRISPR-Local
Find 405 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTTAACGTTTACAATAAA+TGG | 0.162079 | 4.1:+60993978 | MS.gene68242:intron |
| CATCCCATTGTGCTTCAAAT+TGG | 0.244974 | 4.1:+60992109 | MS.gene68242:CDS |
| AAGTATGTTGAAGTAAAATT+TGG | 0.270245 | 4.1:+60993843 | MS.gene68242:CDS |
| GACTCGGAGTTGGGAAAATA+TGG | 0.271444 | 4.1:+60994704 | MS.gene68242:CDS |
| CCAAGAGGTGGTTCCGAAAT+AGG | 0.284480 | 4.1:-60996147 | None:intergenic |
| TTCTGTTGCTGGAATGGCTT+TGG | 0.303558 | 4.1:+60997324 | MS.gene68242:CDS |
| GCAGCTGTTTGTTCTGTTGC+TGG | 0.313169 | 4.1:+60997313 | MS.gene68242:CDS |
| GCATAGGCTTTCTTAGCTTC+AGG | 0.317598 | 4.1:-60997370 | None:intergenic |
| TTCTGCTCAGGATAGATTCT+TGG | 0.329849 | 4.1:+60992069 | MS.gene68242:intron |
| GCATTAGCCCAGCTGAAAAT+AGG | 0.338887 | 4.1:+60993805 | MS.gene68242:CDS |
| GCTTCAGGGGAACCACGTTT+TGG | 0.345216 | 4.1:-60997355 | None:intergenic |
| GGTGTTGGATTCACCTATTT+CGG | 0.357154 | 4.1:+60996134 | MS.gene68242:CDS |
| TGTTCATCAAAAGGATAATC+TGG | 0.369652 | 4.1:+60991740 | MS.gene68242:CDS |
| ACTGGACAGACAATCATTAT+AGG | 0.371489 | 4.1:+60991652 | MS.gene68242:CDS |
| TGAGCAGTGCCTTCCTTGAA+TGG | 0.371548 | 4.1:-60993779 | None:intergenic |
| AAGCACAATGGGATGTTGTT+CGG | 0.380793 | 4.1:-60992101 | None:intergenic |
| CATGTTGATACTGCAATTTA+TGG | 0.381426 | 4.1:+60994522 | MS.gene68242:CDS |
| AGCACAATGGGATGTTGTTC+GGG | 0.381532 | 4.1:-60992100 | None:intergenic |
| GTCAATGCAGCACGAGATGC+TGG | 0.386373 | 4.1:+60994178 | MS.gene68242:CDS |
| CTACAGCCCTTGGCATGTAT+TGG | 0.388197 | 4.1:+60994497 | MS.gene68242:intron |
| TGTTTGTTCTGTTGCTGGAA+TGG | 0.390336 | 4.1:+60997318 | MS.gene68242:CDS |
| TACAGCCCTTGGCATGTATT+GGG | 0.399945 | 4.1:+60994498 | MS.gene68242:intron |
| TTTACTTCAACATACTTTAG+TGG | 0.409710 | 4.1:-60993837 | None:intergenic |
| GTCTATGGGGACTCGGAGTT+GGG | 0.414145 | 4.1:+60994695 | MS.gene68242:CDS |
| GGTGAATCCAACACCGAGTC+AGG | 0.425646 | 4.1:-60996126 | None:intergenic |
| GGTGGCAACTCAGAGGAAAC+TGG | 0.431564 | 4.1:+60997180 | MS.gene68242:CDS |
| GACCCATGTCCAGCTACTCT+TGG | 0.435847 | 4.1:-60992312 | None:intergenic |
| CGCTTCCACTGTCCATTCCC+AGG | 0.435989 | 4.1:-60995437 | None:intergenic |
| GTAGCTGGACATGGGTCCTT+TGG | 0.436150 | 4.1:+60992318 | MS.gene68242:CDS |
| AGCATTTCATAATCCATTCA+AGG | 0.439301 | 4.1:+60993766 | MS.gene68242:CDS |
| TGTCCAGCTACTCTTGGACT+TGG | 0.439456 | 4.1:-60992306 | None:intergenic |
| CGAGTCAGGAATTGCATCAA+TGG | 0.442274 | 4.1:-60996112 | None:intergenic |
| AGTCTATGGGGACTCGGAGT+TGG | 0.442506 | 4.1:+60994694 | MS.gene68242:CDS |
| GTCCATTCCCAGGCGCTGAA+TGG | 0.442664 | 4.1:-60995427 | None:intergenic |
| GCAGCTCAGCCATCGCGAAC+CGG | 0.450133 | 4.1:+60997152 | MS.gene68242:CDS |
| GTTGGCATGGTGACACAAAC+AGG | 0.454036 | 4.1:-60997394 | None:intergenic |
| AGAAACAATTGTTCATCAAA+AGG | 0.455079 | 4.1:+60991731 | MS.gene68242:CDS |
| CCTCCAATTTGAAGCACAAT+GGG | 0.455731 | 4.1:-60992112 | None:intergenic |
| CTGTGGTCTTACACGTCGTC+AGG | 0.456193 | 4.1:+60994554 | MS.gene68242:CDS |
| CCTATTTCGGAACCACCTCT+TGG | 0.458915 | 4.1:+60996147 | MS.gene68242:CDS |
| GCCAAGCATGCTTTGATATG+AGG | 0.463533 | 4.1:-60991686 | None:intergenic |
| CATAGGCTTTCTTAGCTTCA+GGG | 0.465393 | 4.1:-60997369 | None:intergenic |
| GGGGCGCATGGTGTTATGAT+TGG | 0.468266 | 4.1:+60994199 | MS.gene68242:CDS |
| TTCCATTCAGCGCCTGGGAA+TGG | 0.470082 | 4.1:+60995425 | MS.gene68242:CDS |
| CCCATTGTGCTTCAAATTGG+AGG | 0.477496 | 4.1:+60992112 | MS.gene68242:CDS |
| TGCCCAAGTCCAAGAGTAGC+TGG | 0.480300 | 4.1:+60992303 | MS.gene68242:CDS |
| GTCCAGCTACTCTTGGACTT+GGG | 0.484487 | 4.1:-60992305 | None:intergenic |
| AGCCATCGCGAACCGGTCTC+CGG | 0.486104 | 4.1:+60997159 | MS.gene68242:CDS |
| TCTGAGTTGCCACCGGAGAC+CGG | 0.487218 | 4.1:-60997171 | None:intergenic |
| GTCAGTGTCAAATGTCGAAT+TGG | 0.488293 | 4.1:+60992522 | MS.gene68242:CDS |
| GCTAGGATTTGTCGCTACTA+AGG | 0.489182 | 4.1:+60997418 | MS.gene68242:CDS |
| TTGTCTGTCCAGTCCATCAT+TGG | 0.490989 | 4.1:-60991642 | None:intergenic |
| CATGATGTTCCTCCTTCCAT+TGG | 0.502517 | 4.1:-60997275 | None:intergenic |
| GGTGAATTATGACAATGAAA+AGG | 0.503070 | 4.1:+60997246 | MS.gene68242:CDS |
| GCCTCATATCAAAGCATGCT+TGG | 0.504984 | 4.1:+60991685 | MS.gene68242:CDS |
| GCACGAGATGCTGGGGCGCA+TGG | 0.510144 | 4.1:+60994187 | MS.gene68242:CDS |
| TGCAATTCCTGACTCGGTGT+TGG | 0.513136 | 4.1:+60996119 | MS.gene68242:CDS |
| ACCATGACAGCAGCATTCCT+TGG | 0.513928 | 4.1:+60997127 | MS.gene68242:CDS |
| AATGCTGTCAAAGCAGTTGA+AGG | 0.518207 | 4.1:+60997211 | MS.gene68242:CDS |
| TCAATGCAGCACGAGATGCT+GGG | 0.520088 | 4.1:+60994179 | MS.gene68242:CDS |
| ATGGATTATGAAATGCTTAG+TGG | 0.521363 | 4.1:-60993760 | None:intergenic |
| CGATGGCTGAGCTGCCGCCA+AGG | 0.525768 | 4.1:-60997144 | None:intergenic |
| TCCAGGTGAATTCATATCCA+CGG | 0.531274 | 4.1:+60993722 | MS.gene68242:intron |
| CATTGATGCAATTCCTGACT+CGG | 0.531386 | 4.1:+60996113 | MS.gene68242:CDS |
| ATTCGACATTTGACACTGAC+AGG | 0.541211 | 4.1:-60992519 | None:intergenic |
| TTCACGATGTCTCGCACAGT+TGG | 0.548837 | 4.1:-60994734 | None:intergenic |
| ATATGTAGTCTATGGGGACT+CGG | 0.551069 | 4.1:+60994688 | MS.gene68242:CDS |
| GATCACAACATCAGCAGCAA+TGG | 0.551357 | 4.1:+60997096 | MS.gene68242:intron |
| AAGTCTTATGCTTGACCCGA+AGG | 0.553336 | 4.1:+60992344 | MS.gene68242:CDS |
| TCAAGGAAGGCACTGCTCAA+TGG | 0.553455 | 4.1:+60993783 | MS.gene68242:CDS |
| ACATGTCCCAATACATGCCA+AGG | 0.557174 | 4.1:-60994504 | None:intergenic |
| CCCTCCAATTTGAAGCACAA+TGG | 0.559463 | 4.1:-60992113 | None:intergenic |
| GTGTCACCATGCCAACAGCT+AGG | 0.561750 | 4.1:+60997401 | MS.gene68242:CDS |
| GCCAAGGAATGCTGCTGTCA+TGG | 0.563030 | 4.1:-60997128 | None:intergenic |
| AGTCCAAGAGTAGCTGGACA+TGG | 0.565210 | 4.1:+60992309 | MS.gene68242:CDS |
| CCATTGTGCTTCAAATTGGA+GGG | 0.565278 | 4.1:+60992113 | MS.gene68242:CDS |
| CACCGGAGACCGGTTCGCGA+TGG | 0.568043 | 4.1:-60997161 | None:intergenic |
| TTTCATAATCCATTCAAGGA+AGG | 0.571399 | 4.1:+60993770 | MS.gene68242:CDS |
| ATGACAGCAGCATTCCTTGG+CGG | 0.571973 | 4.1:+60997130 | MS.gene68242:CDS |
| AACTCAGAGGAAACTGGTGG+TGG | 0.578759 | 4.1:+60997186 | MS.gene68242:CDS |
| CAATGCAGCACGAGATGCTG+GGG | 0.580578 | 4.1:+60994180 | MS.gene68242:CDS |
| AGTTTCCTCTGAGTTGCCAC+CGG | 0.580967 | 4.1:-60997178 | None:intergenic |
| TGTTTCTGCTGCAAGCATCT+CGG | 0.583567 | 4.1:-60991715 | None:intergenic |
| ATAGGCTTTCTTAGCTTCAG+GGG | 0.585985 | 4.1:-60997368 | None:intergenic |
| GTGTTGCTCCAATGATGGAC+TGG | 0.591144 | 4.1:+60991634 | None:intergenic |
| TAGCGACAAATCCTAGCTGT+TGG | 0.592341 | 4.1:-60997412 | None:intergenic |
| TTAACGTTTACAATAAATGG+AGG | 0.597751 | 4.1:+60993981 | MS.gene68242:CDS |
| AGATCTGTGCGGCCAAGAGG+TGG | 0.598769 | 4.1:-60996159 | None:intergenic |
| GGTGACACAAACAGGAGCAT+AGG | 0.599674 | 4.1:-60997386 | None:intergenic |
| ACTTCAACATACTTTAGTGG+AGG | 0.603337 | 4.1:-60993834 | None:intergenic |
| GCCATACAAAACAAGAGAAG+AGG | 0.604707 | 4.1:+60996212 | MS.gene68242:CDS |
| TGGATTATGAAATGCTTAGT+GGG | 0.605032 | 4.1:-60993759 | None:intergenic |
| AATGAAAAGGAAGAGACCAA+TGG | 0.609364 | 4.1:+60997259 | MS.gene68242:CDS |
| AAAAGATCTGTGCGGCCAAG+AGG | 0.612147 | 4.1:-60996162 | None:intergenic |
| CATCGCGAACCGGTCTCCGG+TGG | 0.615926 | 4.1:+60997162 | MS.gene68242:CDS |
| ACAAATCCTAGCTGTTGGCA+TGG | 0.619696 | 4.1:-60997407 | None:intergenic |
| GTCCAAGAGTAGCTGGACAT+GGG | 0.636881 | 4.1:+60992310 | MS.gene68242:CDS |
| TATACAAGGAAAGTTTGTTG+CGG | 0.637006 | 4.1:+60992461 | MS.gene68242:intron |
| AGGAAGAGACCAATGGAAGG+AGG | 0.639763 | 4.1:+60997266 | MS.gene68242:CDS |
| AAAAGGAAGAGACCAATGGA+AGG | 0.647549 | 4.1:+60997263 | MS.gene68242:CDS |
| GCTGTCAAAGCAGTTGAAGG+AGG | 0.650709 | 4.1:+60997214 | MS.gene68242:CDS |
| TTGGCTGATGAGCCAAAACG+TGG | 0.652108 | 4.1:+60997343 | MS.gene68242:CDS |
| TGTCAAATGTCGAATTGGTG+TGG | 0.664761 | 4.1:+60992527 | MS.gene68242:CDS |
| CAGCGCCTGGGAATGGACAG+TGG | 0.665445 | 4.1:+60995432 | MS.gene68242:CDS |
| CATGTCCCAATACATGCCAA+GGG | 0.670330 | 4.1:-60994503 | None:intergenic |
| ATTTATGGTGCACAAAGCTG+TGG | 0.678668 | 4.1:+60994537 | MS.gene68242:CDS |
| GGGTGATAAAGAAGAAACCG+TGG | 0.679450 | 4.1:-60993739 | None:intergenic |
| GGTCTCCGGTGGCAACTCAG+AGG | 0.684571 | 4.1:+60997173 | MS.gene68242:CDS |
| AAGCATAAGACTTACACCAA+AGG | 0.692742 | 4.1:-60992334 | None:intergenic |
| AGGCATTACTAGTGTTGATG+AGG | 0.694116 | 4.1:+60994001 | MS.gene68242:CDS |
| GGCAACTCAGAGGAAACTGG+TGG | 0.709130 | 4.1:+60997183 | MS.gene68242:CDS |
| AACTGTGCGAGACATCGTGA+AGG | 0.727376 | 4.1:+60994736 | MS.gene68242:CDS |
| TGGACAGTGGAAGCGCAATG+CGG | 0.758211 | 4.1:+60995445 | MS.gene68242:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATATTGAATATTACAT+AGG | - | chr4.1:60995114-60995133 | None:intergenic | 10.0% |
| !! | AAAATATTGAATATTACATA+GGG | - | chr4.1:60995113-60995132 | None:intergenic | 10.0% |
| !! | ATAAATTATTAAACAACAAA+TGG | - | chr4.1:60994640-60994659 | None:intergenic | 10.0% |
| !! | TCTTCTATAATAATAATATT+TGG | + | chr4.1:60993658-60993677 | MS.gene68242:intron | 10.0% |
| !!! | AAAAATTAGTTTTTAAAAAG+AGG | - | chr4.1:60996600-60996619 | None:intergenic | 10.0% |
| !!! | ATAATTTTTTATAAAATGAG+AGG | - | chr4.1:60992656-60992675 | None:intergenic | 10.0% |
| !!! | CCAAAAAATAAATTTTATAT+TGG | - | chr4.1:60994934-60994953 | None:intergenic | 10.0% |
| !!! | CCAATATAAAATTTATTTTT+TGG | + | chr4.1:60994931-60994950 | MS.gene68242:intron | 10.0% |
| !!! | TCTTTTTAAAAACTAATTTT+TGG | + | chr4.1:60996599-60996618 | MS.gene68242:intron | 10.0% |
| !! | AAAAATTGAATTTCAAAATG+AGG | + | chr4.1:60996737-60996756 | MS.gene68242:intron | 15.0% |
| !! | AAAATGGTCAAAAAAATTAT+TGG | + | chr4.1:60995225-60995244 | MS.gene68242:intron | 15.0% |
| !! | AAAATTGAATTTCAAAATGA+GGG | + | chr4.1:60996738-60996757 | MS.gene68242:intron | 15.0% |
| !! | AAATATTGAATATTACATAG+GGG | - | chr4.1:60995112-60995131 | None:intergenic | 15.0% |
| !! | AAATGGTCAAAAAAATTATT+GGG | + | chr4.1:60995226-60995245 | MS.gene68242:intron | 15.0% |
| !! | ACACAAAATGAAAAAATAAA+TGG | - | chr4.1:60992048-60992067 | None:intergenic | 15.0% |
| !! | ATAATATATTCAATGAGTAA+TGG | - | chr4.1:60993294-60993313 | None:intergenic | 15.0% |
| !! | ATTACTCATTGAATATATTA+TGG | + | chr4.1:60993293-60993312 | MS.gene68242:intron | 15.0% |
| !! | ATTTGAATATATTCACTAAT+AGG | - | chr4.1:60995339-60995358 | None:intergenic | 15.0% |
| !! | TAATAATAATATTTGGATCA+TGG | + | chr4.1:60993665-60993684 | MS.gene68242:intron | 15.0% |
| !!! | AAAAAGGCTTAATTTAATTT+TGG | - | chr4.1:60996795-60996814 | None:intergenic | 15.0% |
| !!! | AAATACCTGTTTTTATAAAA+AGG | + | chr4.1:60995194-60995213 | MS.gene68242:intron | 15.0% |
| !!! | AAGCCTTTTTTATTTATTTA+GGG | + | chr4.1:60996805-60996824 | MS.gene68242:intron | 15.0% |
| !!! | AATCTAAGAGAAAATAATTT+TGG | + | chr4.1:60993346-60993365 | MS.gene68242:intron | 15.0% |
| !!! | AGATTTTGAGATTAATAAAT+TGG | + | chr4.1:60993072-60993091 | MS.gene68242:intron | 15.0% |
| !!! | AGTCAATTTTTAAAGTTTTA+AGG | + | chr4.1:60994891-60994910 | MS.gene68242:intron | 15.0% |
| !!! | TAAGCCTTTTTTATTTATTT+AGG | + | chr4.1:60996804-60996823 | MS.gene68242:intron | 15.0% |
| !!! | TCATTTTGAAATTCAATTTT+TGG | - | chr4.1:60996738-60996757 | None:intergenic | 15.0% |
| !!! | TTTATTTTCGTATTTACTTT+AGG | + | chr4.1:60994655-60994674 | MS.gene68242:intron | 15.0% |
| !! | AAAAGGCTATTCAATTTATT+AGG | + | chr4.1:60992832-60992851 | MS.gene68242:intron | 20.0% |
| !! | AAATGGTAATTACTAAAACT+TGG | - | chr4.1:60996276-60996295 | None:intergenic | 20.0% |
| !! | AAGTATGTTGAAGTAAAATT+TGG | + | chr4.1:60993843-60993862 | MS.gene68242:CDS | 20.0% |
| !! | AATCTCAAAATCTTACTTAA+GGG | - | chr4.1:60993065-60993084 | None:intergenic | 20.0% |
| !! | AATTTATAAGATTACCACAA+AGG | - | chr4.1:60993424-60993443 | None:intergenic | 20.0% |
| !! | AGCATTTCAATTCAATAAAA+GGG | + | chr4.1:60994328-60994347 | MS.gene68242:intron | 20.0% |
| !! | AGTTGGATAAAAAGAATATA+TGG | - | chr4.1:60997032-60997051 | None:intergenic | 20.0% |
| !! | ATTATTATCACAAAATCCAT+TGG | + | chr4.1:60992866-60992885 | MS.gene68242:intron | 20.0% |
| !! | ATTTATAAGATTACCACAAA+GGG | - | chr4.1:60993423-60993442 | None:intergenic | 20.0% |
| !! | CAAATATTTCAACAAATATC+AGG | - | chr4.1:60994064-60994083 | None:intergenic | 20.0% |
| !! | CAGTAAATTAAGAAAGAAAA+AGG | - | chr4.1:60995590-60995609 | None:intergenic | 20.0% |
| !! | CTTCCCTAAATAAATAAAAA+AGG | - | chr4.1:60996811-60996830 | None:intergenic | 20.0% |
| !! | GAAATTGCAAAATCAATTTA+AGG | - | chr4.1:60994769-60994788 | None:intergenic | 20.0% |
| !! | GATTTAACGTTTACAATAAA+TGG | + | chr4.1:60993978-60993997 | MS.gene68242:intron | 20.0% |
| !! | TAAGATGAAGAATTACTTAA+AGG | - | chr4.1:60995897-60995916 | None:intergenic | 20.0% |
| !! | TAATAAATATATATCAGCTG+TGG | + | chr4.1:60992279-60992298 | MS.gene68242:intron | 20.0% |
| !! | TAATCTCAAAATCTTACTTA+AGG | - | chr4.1:60993066-60993085 | None:intergenic | 20.0% |
| !! | TAGCATTTCAATTCAATAAA+AGG | + | chr4.1:60994327-60994346 | MS.gene68242:intron | 20.0% |
| !! | TTGAAAAATATGTAGTCTAT+GGG | + | chr4.1:60994681-60994700 | MS.gene68242:CDS | 20.0% |
| !! | TTGTGGTAATCTTATAAATT+AGG | + | chr4.1:60993424-60993443 | MS.gene68242:intron | 20.0% |
| !! | TTTATTGTAAACGTTAAATC+TGG | - | chr4.1:60993978-60993997 | None:intergenic | 20.0% |
| !!! | AAATAGTTCTATGACTTTAT+AGG | - | chr4.1:60995721-60995740 | None:intergenic | 20.0% |
| !!! | AGTTTATTTCTTATCCTTAA+AGG | + | chr4.1:60995692-60995711 | MS.gene68242:intron | 20.0% |
| !!! | ATCAGTATTTTAATAGTGAA+AGG | + | chr4.1:60995792-60995811 | MS.gene68242:intron | 20.0% |
| !!! | ATGAAGTGTTCATATTTAAT+TGG | + | chr4.1:60995069-60995088 | MS.gene68242:intron | 20.0% |
| !!! | CAGTATTTTAACATAGTTAT+GGG | + | chr4.1:60995850-60995869 | MS.gene68242:intron | 20.0% |
| !!! | CTGATATTTGTTGAAATATT+TGG | + | chr4.1:60994062-60994081 | MS.gene68242:intron | 20.0% |
| !!! | TAAGAGAAAATAATTTTGGT+AGG | + | chr4.1:60993350-60993369 | MS.gene68242:intron | 20.0% |
| !!! | TCAGTATTTTAACATAGTTA+TGG | + | chr4.1:60995849-60995868 | MS.gene68242:intron | 20.0% |
| !!! | TGAAGTGTTCATATTTAATT+GGG | + | chr4.1:60995070-60995089 | MS.gene68242:intron | 20.0% |
| !!! | TGTTTTCTTTAATACCTAAT+TGG | + | chr4.1:60992893-60992912 | MS.gene68242:intron | 20.0% |
| !!! | TTTATTTTTAAATATCGGAG+AGG | + | chr4.1:60995272-60995291 | MS.gene68242:intron | 20.0% |
| !!! | TTTGAGATTAATAAATTGGA+CGG | + | chr4.1:60993076-60993095 | MS.gene68242:intron | 20.0% |
| !!! | TTTTTGTTTGAAAAATTGCA+TGG | - | chr4.1:60994275-60994294 | None:intergenic | 20.0% |
| ! | AATGATGTGATTTAGATCTT+AGG | + | chr4.1:60993627-60993646 | MS.gene68242:intron | 25.0% |
| ! | ACTTCATTTCACACAAAAAA+TGG | - | chr4.1:60996293-60996312 | None:intergenic | 25.0% |
| ! | AGAAACAATTGTTCATCAAA+AGG | + | chr4.1:60991731-60991750 | MS.gene68242:CDS | 25.0% |
| ! | AGAGAAATCTAATGTATACA+AGG | + | chr4.1:60992447-60992466 | MS.gene68242:intron | 25.0% |
| ! | AGGATCAATATAGTATCATT+GGG | + | chr4.1:60993242-60993261 | MS.gene68242:intron | 25.0% |
| ! | ATTGTTTATATCATAGCAGT+GGG | + | chr4.1:60991933-60991952 | MS.gene68242:intron | 25.0% |
| ! | CTATTGTTACAAATCGAAAT+TGG | + | chr4.1:60993488-60993507 | MS.gene68242:intron | 25.0% |
| ! | CTTGAAAAATATGTAGTCTA+TGG | + | chr4.1:60994680-60994699 | MS.gene68242:CDS | 25.0% |
| ! | GAATGGAAAAAATTGAGTAA+AGG | - | chr4.1:60995413-60995432 | None:intergenic | 25.0% |
| ! | GATTTGTAACAATAGTAGAT+AGG | - | chr4.1:60993483-60993502 | None:intergenic | 25.0% |
| ! | GGTTTATGATAGAACATTAT+GGG | + | chr4.1:60993105-60993124 | MS.gene68242:intron | 25.0% |
| ! | GTGGTAAAATATATCTGTAT+AGG | + | chr4.1:60991875-60991894 | MS.gene68242:intron | 25.0% |
| ! | TAAAAAGGAAGGAGTAAAAA+TGG | + | chr4.1:60995209-60995228 | MS.gene68242:intron | 25.0% |
| ! | TAAGATAACAAATTTAGTGC+TGG | - | chr4.1:60994094-60994113 | None:intergenic | 25.0% |
| ! | TAAGATCTAAATCACATCAT+TGG | - | chr4.1:60993628-60993647 | None:intergenic | 25.0% |
| ! | TAATAAATTGGACGGAAATA+TGG | + | chr4.1:60993084-60993103 | MS.gene68242:intron | 25.0% |
| ! | TAGCATAAAACCTATTGATA+TGG | - | chr4.1:60996658-60996677 | None:intergenic | 25.0% |
| ! | TATATAACATGCAAATGCAA+GGG | - | chr4.1:60995316-60995335 | None:intergenic | 25.0% |
| ! | TGAAAAATATGTAGTCTATG+GGG | + | chr4.1:60994682-60994701 | MS.gene68242:CDS | 25.0% |
| ! | TGACTGAAGTCAAAAAAAAA+TGG | - | chr4.1:60995543-60995562 | None:intergenic | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | + | chr4.1:60993104-60993123 | MS.gene68242:intron | 25.0% |
| ! | TGTAATGTAAATCACAAAAG+AGG | - | chr4.1:60997007-60997026 | None:intergenic | 25.0% |
| ! | TTAAAGAAAACAGAAACCAA+TGG | - | chr4.1:60992885-60992904 | None:intergenic | 25.0% |
| ! | TTAACGTTTACAATAAATGG+AGG | + | chr4.1:60993981-60994000 | MS.gene68242:CDS | 25.0% |
| ! | TTACATGGGATTTAGTATTT+GGG | + | chr4.1:60993543-60993562 | MS.gene68242:intron | 25.0% |
| ! | TTCTTATGATGAACTTTGTA+AGG | + | chr4.1:60992560-60992579 | MS.gene68242:intron | 25.0% |
| ! | TTGCACAAACAATATTAAGA+GGG | - | chr4.1:60994436-60994455 | None:intergenic | 25.0% |
| ! | TTTACTTCAACATACTTTAG+TGG | - | chr4.1:60993840-60993859 | None:intergenic | 25.0% |
| ! | TTTATTTATTTAGGGAAGCT+GGG | + | chr4.1:60996813-60996832 | MS.gene68242:intron | 25.0% |
| ! | TTTGCACAAACAATATTAAG+AGG | - | chr4.1:60994437-60994456 | None:intergenic | 25.0% |
| !! | ATTTTGAACTGTGGAATATT+AGG | + | chr4.1:60996465-60996484 | MS.gene68242:intron | 25.0% |
| !! | CTTTTAGATTGCATTCAAAA+AGG | + | chr4.1:60992815-60992834 | MS.gene68242:intron | 25.0% |
| !! | GTCTCTATCTTTTACAAAAA+CGG | + | chr4.1:60995143-60995162 | MS.gene68242:intron | 25.0% |
| !! | GTTTCTCTTATAGTTTTTCT+AGG | - | chr4.1:60993043-60993062 | None:intergenic | 25.0% |
| !! | TAATCTTTGTTTAGGAAATC+AGG | + | chr4.1:60993222-60993241 | MS.gene68242:intron | 25.0% |
| !! | TCCTTCCTTTTTATAAAAAC+AGG | - | chr4.1:60995202-60995221 | None:intergenic | 25.0% |
| !! | TTTTCTATCCAATGTTACAT+GGG | + | chr4.1:60993529-60993548 | MS.gene68242:intron | 25.0% |
| !!! | ACCTGTTTTTATAAAAAGGA+AGG | + | chr4.1:60995198-60995217 | MS.gene68242:intron | 25.0% |
| !!! | CAAAAAAGTTGCTTTATTTC+AGG | + | chr4.1:60994289-60994308 | MS.gene68242:intron | 25.0% |
| !!! | CTTTAAGATTTAACGTGATA+TGG | - | chr4.1:60992221-60992240 | None:intergenic | 25.0% |
| !!! | TTTTATTTATTTAGGGAAGC+TGG | + | chr4.1:60996812-60996831 | MS.gene68242:intron | 25.0% |
| !!! | TTTTTTTTGAAAGAGAGTAC+AGG | - | chr4.1:60995024-60995043 | None:intergenic | 25.0% |
| AAAAATTGCATGGTCAAAAG+GGG | - | chr4.1:60994265-60994284 | None:intergenic | 30.0% | |
| AAAATCATCACCAAAGCTTA+AGG | + | chr4.1:60994354-60994373 | MS.gene68242:intron | 30.0% | |
| AAACCTATTGATATGGAGTT+CGG | - | chr4.1:60996651-60996670 | None:intergenic | 30.0% | |
| AAATGAAAGAGTGAAAGTGA+AGG | + | chr4.1:60991796-60991815 | MS.gene68242:intron | 30.0% | |
| AATATTTGGATCATGGTTTC+TGG | + | chr4.1:60993672-60993691 | MS.gene68242:intron | 30.0% | |
| AATGAAAGAGTGAAAGTGAA+GGG | + | chr4.1:60991797-60991816 | MS.gene68242:intron | 30.0% | |
| ACAACTAAGCTGTACTTAAA+TGG | + | chr4.1:60992754-60992773 | MS.gene68242:intron | 30.0% | |
| AGAAATTTCCAGAGAACAAA+AGG | - | chr4.1:60994797-60994816 | None:intergenic | 30.0% | |
| AGCATTTCATAATCCATTCA+AGG | + | chr4.1:60993766-60993785 | MS.gene68242:CDS | 30.0% | |
| ATATAACATGCAAATGCAAG+GGG | - | chr4.1:60995315-60995334 | None:intergenic | 30.0% | |
| ATATAATAGCAGCTAATTGG+AGG | - | chr4.1:60995367-60995386 | None:intergenic | 30.0% | |
| ATATTTGGATCATGGTTTCT+GGG | + | chr4.1:60993673-60993692 | MS.gene68242:intron | 30.0% | |
| ATGTTTGTGAGTAGTTAAGT+TGG | - | chr4.1:60997049-60997068 | None:intergenic | 30.0% | |
| ATTCCTATTTATGGATGGTA+AGG | + | chr4.1:60995622-60995641 | MS.gene68242:intron | 30.0% | |
| CAAAGTCAATAACCTATTTG+TGG | - | chr4.1:60996347-60996366 | None:intergenic | 30.0% | |
| CAGGATCAATATAGTATCAT+TGG | + | chr4.1:60993241-60993260 | MS.gene68242:intron | 30.0% | |
| CATGTAAGGAAAAGGAAAAA+GGG | + | chr4.1:60996498-60996517 | MS.gene68242:intron | 30.0% | |
| CATGTTGATACTGCAATTTA+TGG | + | chr4.1:60994522-60994541 | MS.gene68242:CDS | 30.0% | |
| CCACAAAAAATCATGATTGT+AGG | - | chr4.1:60991859-60991878 | None:intergenic | 30.0% | |
| CTCATATTATGTAGAATAGC+TGG | + | chr4.1:60994823-60994842 | MS.gene68242:intron | 30.0% | |
| CTTTAATACCTAATTGGTGT+GGG | + | chr4.1:60992899-60992918 | MS.gene68242:intron | 30.0% | |
| GAAAAATTGCATGGTCAAAA+GGG | - | chr4.1:60994266-60994285 | None:intergenic | 30.0% | |
| GACTTTATAGGATTCCTTTA+AGG | - | chr4.1:60995709-60995728 | None:intergenic | 30.0% | |
| GATCAATATAGTATCATTGG+GGG | + | chr4.1:60993244-60993263 | MS.gene68242:intron | 30.0% | |
| GATTGTTTATATCATAGCAG+TGG | + | chr4.1:60991932-60991951 | MS.gene68242:intron | 30.0% | |
| GCTATTCAATCATCAAATGT+GGG | + | chr4.1:60992004-60992023 | MS.gene68242:intron | 30.0% | |
| GCTGTAGAGATTATCAAAAA+TGG | - | chr4.1:60994484-60994503 | None:intergenic | 30.0% | |
| GGATCAATATAGTATCATTG+GGG | + | chr4.1:60993243-60993262 | MS.gene68242:intron | 30.0% | |
| GGATTCAAAAATCTAAGTGA+AGG | - | chr4.1:60996626-60996645 | None:intergenic | 30.0% | |
| GGTGAATTATGACAATGAAA+AGG | + | chr4.1:60997246-60997265 | MS.gene68242:CDS | 30.0% | |
| GTATATAACATGCAAATGCA+AGG | - | chr4.1:60995317-60995336 | None:intergenic | 30.0% | |
| GTCATATAATAGCAGCTAAT+TGG | - | chr4.1:60995370-60995389 | None:intergenic | 30.0% | |
| GTTACATGGGATTTAGTATT+TGG | + | chr4.1:60993542-60993561 | MS.gene68242:intron | 30.0% | |
| TACTAAATCCCATGTAACAT+TGG | - | chr4.1:60993540-60993559 | None:intergenic | 30.0% | |
| TATTAGCAAAAAGATCTGTG+CGG | - | chr4.1:60996173-60996192 | None:intergenic | 30.0% | |
| TCAATATGACAACATGCAAT+TGG | + | chr4.1:60992386-60992405 | MS.gene68242:intron | 30.0% | |
| TCATGTAAGGAAAAGGAAAA+AGG | + | chr4.1:60996497-60996516 | MS.gene68242:intron | 30.0% | |
| TCCTAACTCTCAATTCATAA+GGG | + | chr4.1:60996873-60996892 | MS.gene68242:intron | 30.0% | |
| TCTAATTGTAACATGCTGAT+AGG | + | chr4.1:60993193-60993212 | MS.gene68242:intron | 30.0% | |
| TCTTCTACAAGATAAGATAG+TGG | + | chr4.1:60996966-60996985 | MS.gene68242:intron | 30.0% | |
| TCTTTAATACCTAATTGGTG+TGG | + | chr4.1:60992898-60992917 | MS.gene68242:intron | 30.0% | |
| TGAAAAATTGCATGGTCAAA+AGG | - | chr4.1:60994267-60994286 | None:intergenic | 30.0% | |
| TGCACAAACAATATTAAGAG+GGG | - | chr4.1:60994435-60994454 | None:intergenic | 30.0% | |
| TGCTATTCAATCATCAAATG+TGG | + | chr4.1:60992003-60992022 | MS.gene68242:intron | 30.0% | |
| TGGATTATGAAATGCTTAGT+GGG | - | chr4.1:60993762-60993781 | None:intergenic | 30.0% | |
| TGTTCATCAAAAGGATAATC+TGG | + | chr4.1:60991740-60991759 | MS.gene68242:CDS | 30.0% | |
| TTACCATCCATAAATAGGAA+TGG | - | chr4.1:60995623-60995642 | None:intergenic | 30.0% | |
| TTGTATGTCTACATGTACAT+GGG | - | chr4.1:60993907-60993926 | None:intergenic | 30.0% | |
| TTTCATAATCCATTCAAGGA+AGG | + | chr4.1:60993770-60993789 | MS.gene68242:CDS | 30.0% | |
| ! | ATGGATTATGAAATGCTTAG+TGG | - | chr4.1:60993763-60993782 | None:intergenic | 30.0% |
| ! | CTATCTTTTACAAAAACGGA+TGG | + | chr4.1:60995147-60995166 | MS.gene68242:intron | 30.0% |
| ! | CTTTTCTATCCAATGTTACA+TGG | + | chr4.1:60993528-60993547 | MS.gene68242:intron | 30.0% |
| ! | GAACTTTTGAACTTTGTAGA+CGG | + | chr4.1:60996068-60996087 | MS.gene68242:intron | 30.0% |
| ! | GGAGTTTGTAATCTTTGTTT+AGG | + | chr4.1:60993214-60993233 | MS.gene68242:intron | 30.0% |
| ! | GTTCGTCTTAATTGCAATTT+TGG | + | chr4.1:60996543-60996562 | MS.gene68242:intron | 30.0% |
| !! | ACCAAAGCTTAAGGTTTTAA+GGG | + | chr4.1:60994363-60994382 | MS.gene68242:intron | 30.0% |
| !! | TATACAAGGAAAGTTTGTTG+CGG | + | chr4.1:60992461-60992480 | MS.gene68242:intron | 30.0% |
| !! | TTTTGTGCCATTCCTATTTA+TGG | + | chr4.1:60995613-60995632 | MS.gene68242:intron | 30.0% |
| !!! | CCTACAATCATGATTTTTTG+TGG | + | chr4.1:60991856-60991875 | MS.gene68242:intron | 30.0% |
| !!! | GTATTTTTAGTCCGTCTATA+GGG | - | chr4.1:60995180-60995199 | None:intergenic | 30.0% |
| !!! | TTAGCAGTTATTTTGAACTG+TGG | + | chr4.1:60996456-60996475 | MS.gene68242:intron | 30.0% |
| AAAATTGCATGGTCAAAAGG+GGG | - | chr4.1:60994264-60994283 | None:intergenic | 35.0% | |
| AACCTATTGATATGGAGTTC+GGG | - | chr4.1:60996650-60996669 | None:intergenic | 35.0% | |
| AAGCATAAGACTTACACCAA+AGG | - | chr4.1:60992337-60992356 | None:intergenic | 35.0% | |
| AAGGAAAAGGAAAAAGGGAA+AGG | + | chr4.1:60996503-60996522 | MS.gene68242:intron | 35.0% | |
| AATGAAAAGGAAGAGACCAA+TGG | + | chr4.1:60997259-60997278 | MS.gene68242:CDS | 35.0% | |
| ACTAAGCTGTACTTAAATGG+TGG | + | chr4.1:60992788-60992807 | MS.gene68242:intron | 35.0% | |
| ACTGGACAGACAATCATTAT+AGG | + | chr4.1:60991652-60991671 | MS.gene68242:CDS | 35.0% | |
| ACTTCAACATACTTTAGTGG+AGG | - | chr4.1:60993837-60993856 | None:intergenic | 35.0% | |
| ACTTCTTAACAAATGCCCTT+AGG | + | chr4.1:60994954-60994973 | MS.gene68242:intron | 35.0% | |
| AGAATAGCTGGTATTCGATA+AGG | + | chr4.1:60994835-60994854 | MS.gene68242:intron | 35.0% | |
| AGTTGAAGGAGGAAAAATGA+AGG | + | chr4.1:60997225-60997244 | MS.gene68242:CDS | 35.0% | |
| ATCACAAAAGAGGAACTAGT+AGG | - | chr4.1:60996997-60997016 | None:intergenic | 35.0% | |
| ATGAAAGAGTGAAAGTGAAG+GGG | + | chr4.1:60991798-60991817 | MS.gene68242:intron | 35.0% | |
| CAAATTGTTGGACTCAATAG+TGG | - | chr4.1:60996706-60996725 | None:intergenic | 35.0% | |
| CAATAGTAGATAGGAGATAG+TGG | - | chr4.1:60993474-60993493 | None:intergenic | 35.0% | |
| CCAACGTGGCAATAATTTAT+TGG | + | chr4.1:60996938-60996957 | MS.gene68242:intron | 35.0% | |
| CCAATAAATTATTGCCACGT+TGG | - | chr4.1:60996941-60996960 | None:intergenic | 35.0% | |
| CTCACATTCTTACCACAAAT+AGG | + | chr4.1:60996332-60996351 | MS.gene68242:intron | 35.0% | |
| CTCCTAACTCTCAATTCATA+AGG | + | chr4.1:60996872-60996891 | MS.gene68242:intron | 35.0% | |
| CTCCTTACTACAAAATCCAA+AGG | - | chr4.1:60992975-60992994 | None:intergenic | 35.0% | |
| CTTATGAATTGAGAGTTAGG+AGG | - | chr4.1:60996874-60996893 | None:intergenic | 35.0% | |
| CTTCTTAACAAATGCCCTTA+GGG | + | chr4.1:60994955-60994974 | MS.gene68242:intron | 35.0% | |
| CTTGTATGTCTACATGTACA+TGG | - | chr4.1:60993908-60993927 | None:intergenic | 35.0% | |
| GAGTCCAACAATTTGAATGA+GGG | + | chr4.1:60996711-60996730 | MS.gene68242:intron | 35.0% | |
| GTTTGTGCAAAATTGCTATG+CGG | + | chr4.1:60994446-60994465 | MS.gene68242:intron | 35.0% | |
| TAAATTATTGCCACGTTGGA+TGG | - | chr4.1:60996937-60996956 | None:intergenic | 35.0% | |
| TAACATAGTTATGGGAGAAG+TGG | + | chr4.1:60995858-60995877 | MS.gene68242:intron | 35.0% | |
| TCACAAAAGAGGAACTAGTA+GGG | - | chr4.1:60996996-60997015 | None:intergenic | 35.0% | |
| TCCCTTAAAACCTTAAGCTT+TGG | - | chr4.1:60994367-60994386 | None:intergenic | 35.0% | |
| TGAAATGCTAAGTAAAACCC+TGG | - | chr4.1:60994317-60994336 | None:intergenic | 35.0% | |
| TGAGTCCAACAATTTGAATG+AGG | + | chr4.1:60996710-60996729 | MS.gene68242:intron | 35.0% | |
| TTAATTCATCCATGAGTGCA+TGG | + | chr4.1:60995914-60995933 | MS.gene68242:intron | 35.0% | |
| TTCAGAAGCAATATGACTCT+TGG | - | chr4.1:60993400-60993419 | None:intergenic | 35.0% | |
| TTCTTCTGACGATTCTTTCT+TGG | + | chr4.1:60994127-60994146 | MS.gene68242:intron | 35.0% | |
| TTGGAAATGTATTAAGCTGC+AGG | - | chr4.1:60993609-60993628 | None:intergenic | 35.0% | |
| ! | CACCAAAGCTTAAGGTTTTA+AGG | + | chr4.1:60994362-60994381 | MS.gene68242:intron | 35.0% |
| ! | GAATACTCCTATTTTCAGCT+GGG | - | chr4.1:60993815-60993834 | None:intergenic | 35.0% |
| ! | GACCTTTGGATTTTGTAGTA+AGG | + | chr4.1:60992970-60992989 | MS.gene68242:intron | 35.0% |
| ! | TCATTTTGTGTATTCTGCTC+AGG | + | chr4.1:60992057-60992076 | MS.gene68242:intron | 35.0% |
| ! | TCCAAATTTTCAGTTGCACA+GGG | - | chr4.1:60996770-60996789 | None:intergenic | 35.0% |
| ! | TTCTTACTCCTTTTGTTCTC+TGG | + | chr4.1:60994786-60994805 | MS.gene68242:intron | 35.0% |
| !! | TTGCTTTATTTCAGGAACCA+GGG | + | chr4.1:60994297-60994316 | MS.gene68242:intron | 35.0% |
| !!! | ACCTCTTCTCTTGTTTTGTA+TGG | - | chr4.1:60996216-60996235 | None:intergenic | 35.0% |
| !!! | AGCTTAAGGTTTTAAGGGAA+TGG | + | chr4.1:60994368-60994387 | MS.gene68242:intron | 35.0% |
| !!! | ATGGTTTTAGTCCCTATAGA+CGG | + | chr4.1:60995166-60995185 | MS.gene68242:intron | 35.0% |
| !!! | GGTATTTTTAGTCCGTCTAT+AGG | - | chr4.1:60995181-60995200 | None:intergenic | 35.0% |
| !!! | TCTTCTCTTGTTTTGTATGG+CGG | - | chr4.1:60996213-60996232 | None:intergenic | 35.0% |
| !!! | TGAATTTTCTGCTGTTTTCC+AGG | + | chr4.1:60993705-60993724 | MS.gene68242:intron | 35.0% |
| AAAAGGAAGAGACCAATGGA+AGG | + | chr4.1:60997263-60997282 | MS.gene68242:CDS | 40.0% | |
| AAATTGCATGGTCAAAAGGG+GGG | - | chr4.1:60994263-60994282 | None:intergenic | 40.0% | |
| AAGCACAATGGGATGTTGTT+CGG | - | chr4.1:60992104-60992123 | None:intergenic | 40.0% | |
| AATGCTGTCAAAGCAGTTGA+AGG | + | chr4.1:60997211-60997230 | MS.gene68242:CDS | 40.0% | |
| ACTCGAGTCATGTAAGGAAA+AGG | + | chr4.1:60996490-60996509 | MS.gene68242:intron | 40.0% | |
| AGAGGTTGTTCTATGCACAT+AGG | + | chr4.1:60996230-60996249 | MS.gene68242:intron | 40.0% | |
| AGTAAGGAGAGTAGATCACA+TGG | + | chr4.1:60992986-60993005 | MS.gene68242:intron | 40.0% | |
| ATAGGCTTTCTTAGCTTCAG+GGG | - | chr4.1:60997371-60997390 | None:intergenic | 40.0% | |
| ATATGTAGTCTATGGGGACT+CGG | + | chr4.1:60994688-60994707 | MS.gene68242:CDS | 40.0% | |
| ATTCGACATTTGACACTGAC+AGG | - | chr4.1:60992522-60992541 | None:intergenic | 40.0% | |
| ATTGTTGGACTCAATAGTGG+TGG | - | chr4.1:60996703-60996722 | None:intergenic | 40.0% | |
| ATTTATGGTGCACAAAGCTG+TGG | + | chr4.1:60994537-60994556 | MS.gene68242:CDS | 40.0% | |
| CAATATAGTATCATTGGGGG+AGG | + | chr4.1:60993247-60993266 | MS.gene68242:intron | 40.0% | |
| CATAGGCTTTCTTAGCTTCA+GGG | - | chr4.1:60997372-60997391 | None:intergenic | 40.0% | |
| CATCCCATTGTGCTTCAAAT+TGG | + | chr4.1:60992109-60992128 | MS.gene68242:CDS | 40.0% | |
| CATTGATGCAATTCCTGACT+CGG | + | chr4.1:60996113-60996132 | MS.gene68242:CDS | 40.0% | |
| CCATTGTGCTTCAAATTGGA+GGG | + | chr4.1:60992113-60992132 | MS.gene68242:CDS | 40.0% | |
| CTAATTGGTGTGGGAAAAGA+TGG | + | chr4.1:60992908-60992927 | MS.gene68242:intron | 40.0% | |
| GAAGCTAAAGCAAAACACAG+TGG | + | chr4.1:60996403-60996422 | MS.gene68242:intron | 40.0% | |
| GCACCTTACCATCCATAAAT+AGG | - | chr4.1:60995628-60995647 | None:intergenic | 40.0% | |
| GCCATACAAAACAAGAGAAG+AGG | + | chr4.1:60996212-60996231 | MS.gene68242:CDS | 40.0% | |
| GCCCTTATGAATTGAGAGTT+AGG | - | chr4.1:60996877-60996896 | None:intergenic | 40.0% | |
| GTCAGTGTCAAATGTCGAAT+TGG | + | chr4.1:60992522-60992541 | MS.gene68242:CDS | 40.0% | |
| TATTGCTTCTGAACCCTTTG+TGG | + | chr4.1:60993407-60993426 | MS.gene68242:intron | 40.0% | |
| TCAGGTTCATTTACACTGCT+TGG | + | chr4.1:60994572-60994591 | MS.gene68242:intron | 40.0% | |
| TCCAGGTGAATTCATATCCA+CGG | + | chr4.1:60993722-60993741 | MS.gene68242:intron | 40.0% | |
| TCCCTGTGCAACTGAAAATT+TGG | + | chr4.1:60996766-60996785 | MS.gene68242:intron | 40.0% | |
| TGAAAGAGTGAAAGTGAAGG+GGG | + | chr4.1:60991799-60991818 | MS.gene68242:intron | 40.0% | |
| TGAACTAGAGCAGAACTTGA+TGG | + | chr4.1:60991978-60991997 | MS.gene68242:intron | 40.0% | |
| TGGTCCCTCATTCAAATTGT+TGG | - | chr4.1:60996718-60996737 | None:intergenic | 40.0% | |
| TGTCAAATGTCGAATTGGTG+TGG | + | chr4.1:60992527-60992546 | MS.gene68242:CDS | 40.0% | |
| TGTTTGTTCTGTTGCTGGAA+TGG | + | chr4.1:60997318-60997337 | MS.gene68242:CDS | 40.0% | |
| TTCTGCTCAGGATAGATTCT+TGG | + | chr4.1:60992069-60992088 | MS.gene68242:intron | 40.0% | |
| TTTGCAATGTTGCAGTAGCT+AGG | + | chr4.1:60995959-60995978 | MS.gene68242:intron | 40.0% | |
| ! | AGCGACGATTTTCTAACCTT+CGG | - | chr4.1:60992363-60992382 | None:intergenic | 40.0% |
| ! | CATCTTTTCCCACACCAATT+AGG | - | chr4.1:60992910-60992929 | None:intergenic | 40.0% |
| ! | CCTCCAATTTGAAGCACAAT+GGG | - | chr4.1:60992115-60992134 | None:intergenic | 40.0% |
| ! | CTCCAAATTTTCAGTTGCAC+AGG | - | chr4.1:60996771-60996790 | None:intergenic | 40.0% |
| ! | GGAATACTCCTATTTTCAGC+TGG | - | chr4.1:60993816-60993835 | None:intergenic | 40.0% |
| ! | GGTGTTGGATTCACCTATTT+CGG | + | chr4.1:60996134-60996153 | MS.gene68242:CDS | 40.0% |
| ! | GGTTGATCCTTTTGAACTAG+TGG | - | chr4.1:60996916-60996935 | None:intergenic | 40.0% |
| ! | GTGCCATTCCTATTTATGGA+TGG | + | chr4.1:60995617-60995636 | MS.gene68242:intron | 40.0% |
| ! | TCTTTCTTGGCCTGTTTTCA+CGG | + | chr4.1:60994140-60994159 | MS.gene68242:intron | 40.0% |
| ! | TGGCCATGTTTTACCACAAA+GGG | - | chr4.1:60993380-60993399 | None:intergenic | 40.0% |
| ! | TTGATAATCTCTACAGCCCT+TGG | + | chr4.1:60994487-60994506 | MS.gene68242:intron | 40.0% |
| ! | TTGGCCATGTTTTACCACAA+AGG | - | chr4.1:60993381-60993400 | None:intergenic | 40.0% |
| !! | AGGCATTACTAGTGTTGATG+AGG | + | chr4.1:60994001-60994020 | MS.gene68242:CDS | 40.0% |
| !! | GTTGCTTTATTTCAGGAACC+AGG | + | chr4.1:60994296-60994315 | MS.gene68242:intron | 40.0% |
| !! | TGGGAAAAGATGGTGGAAAA+GGG | + | chr4.1:60992918-60992937 | MS.gene68242:intron | 40.0% |
| !!! | AATTTTTTCCATTCAGCGCC+TGG | + | chr4.1:60995419-60995438 | MS.gene68242:CDS | 40.0% |
| !!! | ATTTTTTCCATTCAGCGCCT+GGG | + | chr4.1:60995420-60995439 | MS.gene68242:CDS | 40.0% |
| !!! | TGCTGCTTTTCGAAATTGCA+AGG | + | chr4.1:60995469-60995488 | MS.gene68242:CDS | 40.0% |
| AAAAGGGGCTTAGGTGGTTT+GGG | + | chr4.1:60992934-60992953 | MS.gene68242:intron | 45.0% | |
| AAAGGATCAACCATCCAACG+TGG | + | chr4.1:60996924-60996943 | MS.gene68242:intron | 45.0% | |
| AACTTGACAGCCTTTCAGCA+TGG | - | chr4.1:60992610-60992629 | None:intergenic | 45.0% | |
| AAGGAGAGTAGATCACATGG+AGG | + | chr4.1:60992989-60993008 | MS.gene68242:intron | 45.0% | |
| AATGTTGCAGTAGCTAGGTC+AGG | + | chr4.1:60995964-60995983 | MS.gene68242:intron | 45.0% | |
| ACAAATCCTAGCTGTTGGCA+TGG | - | chr4.1:60997410-60997429 | None:intergenic | 45.0% | |
| ACATGTCCCAATACATGCCA+AGG | - | chr4.1:60994507-60994526 | None:intergenic | 45.0% | |
| ACCGTGGATATGAATTCACC+TGG | - | chr4.1:60993726-60993745 | None:intergenic | 45.0% | |
| AGCACAATGGGATGTTGTTC+GGG | - | chr4.1:60992103-60992122 | None:intergenic | 45.0% | |
| AGGGGGGAAAACGAACTAAA+AGG | + | chr4.1:60991816-60991835 | MS.gene68242:intron | 45.0% | |
| ATTGGTGTGGGAAAAGATGG+TGG | + | chr4.1:60992911-60992930 | MS.gene68242:intron | 45.0% | |
| CACCCGAACTCCATATCAAT+AGG | + | chr4.1:60996645-60996664 | MS.gene68242:intron | 45.0% | |
| CATGATGTTCCTCCTTCCAT+TGG | - | chr4.1:60997278-60997297 | None:intergenic | 45.0% | |
| CATGTCCCAATACATGCCAA+GGG | - | chr4.1:60994506-60994525 | None:intergenic | 45.0% | |
| CCACCCTTTGTGGTAAAACA+TGG | + | chr4.1:60993374-60993393 | MS.gene68242:intron | 45.0% | |
| CCCATTGTGCTTCAAATTGG+AGG | + | chr4.1:60992112-60992131 | MS.gene68242:CDS | 45.0% | |
| CGAGTCAGGAATTGCATCAA+TGG | - | chr4.1:60996115-60996134 | None:intergenic | 45.0% | |
| CTATTGATATGGAGTTCGGG+TGG | - | chr4.1:60996647-60996666 | None:intergenic | 45.0% | |
| GAAAGAGTGAAAGTGAAGGG+GGG | + | chr4.1:60991800-60991819 | MS.gene68242:intron | 45.0% | |
| GACTCGGAGTTGGGAAAATA+TGG | + | chr4.1:60994704-60994723 | MS.gene68242:CDS | 45.0% | |
| GATCACAACATCAGCAGCAA+TGG | + | chr4.1:60997096-60997115 | MS.gene68242:intron | 45.0% | |
| GCATAGGCTTTCTTAGCTTC+AGG | - | chr4.1:60997373-60997392 | None:intergenic | 45.0% | |
| GCATGTAGAGAGAAGACCTT+TGG | + | chr4.1:60992956-60992975 | MS.gene68242:intron | 45.0% | |
| GCATTAGCCCAGCTGAAAAT+AGG | + | chr4.1:60993805-60993824 | MS.gene68242:CDS | 45.0% | |
| GCCAAGCATGCTTTGATATG+AGG | - | chr4.1:60991689-60991708 | None:intergenic | 45.0% | |
| GCCTCATATCAAAGCATGCT+TGG | + | chr4.1:60991685-60991704 | MS.gene68242:CDS | 45.0% | |
| GGAGGATTGTCAATCACTAG+AGG | + | chr4.1:60993007-60993026 | MS.gene68242:intron | 45.0% | |
| GGGGGGAAAACGAACTAAAA+GGG | + | chr4.1:60991817-60991836 | MS.gene68242:intron | 45.0% | |
| GGGTGATAAAGAAGAAACCG+TGG | - | chr4.1:60993742-60993761 | None:intergenic | 45.0% | |
| TACAGCCCTTGGCATGTATT+GGG | + | chr4.1:60994498-60994517 | MS.gene68242:intron | 45.0% | |
| TAGCGACAAATCCTAGCTGT+TGG | - | chr4.1:60997415-60997434 | None:intergenic | 45.0% | |
| TGCTGAAAGGCTGTCAAGTT+TGG | + | chr4.1:60992610-60992629 | MS.gene68242:intron | 45.0% | |
| TTCTCTGTCTCCATGCTGAA+AGG | + | chr4.1:60992597-60992616 | MS.gene68242:intron | 45.0% | |
| TTCTGTTGCTGGAATGGCTT+TGG | + | chr4.1:60997324-60997343 | MS.gene68242:CDS | 45.0% | |
| TTGTCAATCACTAGAGGCAG+AGG | + | chr4.1:60993013-60993032 | MS.gene68242:intron | 45.0% | |
| ! | AAGCCTTATCCCATGAAGTG+GGG | - | chr4.1:60993153-60993172 | None:intergenic | 45.0% |
| ! | AAGTCTTATGCTTGACCCGA+AGG | + | chr4.1:60992344-60992363 | MS.gene68242:CDS | 45.0% |
| ! | ACTTGGTTTCTGAGAGTGCA+AGG | - | chr4.1:60996259-60996278 | None:intergenic | 45.0% |
| ! | AGGCTTGGTTGTTGTTGTTG+TGG | + | chr4.1:60993167-60993186 | MS.gene68242:intron | 45.0% |
| ! | AGTAGATAGGAGATAGTGGC+TGG | - | chr4.1:60993470-60993489 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCATGAAGT+GGG | - | chr4.1:60993154-60993173 | None:intergenic | 45.0% |
| ! | CCATGTTTTACCACAAAGGG+TGG | - | chr4.1:60993377-60993396 | None:intergenic | 45.0% |
| ! | CCCTCCAATTTGAAGCACAA+TGG | - | chr4.1:60992116-60992135 | None:intergenic | 45.0% |
| ! | CTTGGTTTCTGAGAGTGCAA+GGG | - | chr4.1:60996258-60996277 | None:intergenic | 45.0% |
| ! | CTTTCTTGGCCTGTTTTCAC+GGG | + | chr4.1:60994141-60994160 | MS.gene68242:intron | 45.0% |
| ! | GCGACGATTTTCTAACCTTC+GGG | - | chr4.1:60992362-60992381 | None:intergenic | 45.0% |
| ! | GGCTTGGTTGTTGTTGTTGT+GGG | + | chr4.1:60993168-60993187 | MS.gene68242:intron | 45.0% |
| ! | GGGAAGCTGGGAATTTTTGA+AGG | + | chr4.1:60996825-60996844 | MS.gene68242:intron | 45.0% |
| ! | GTAGATAGGAGATAGTGGCT+GGG | - | chr4.1:60993469-60993488 | None:intergenic | 45.0% |
| ! | TGTTTCTGCTGCAAGCATCT+CGG | - | chr4.1:60991718-60991737 | None:intergenic | 45.0% |
| ! | TTTCTTGGCCTGTTTTCACG+GGG | + | chr4.1:60994142-60994161 | MS.gene68242:intron | 45.0% |
| !! | ATAAGGGCATTCCACATCTC+AGG | + | chr4.1:60996889-60996908 | MS.gene68242:intron | 45.0% |
| !! | GGGAAAAGATGGTGGAAAAG+GGG | + | chr4.1:60992919-60992938 | MS.gene68242:intron | 45.0% |
| !! | GTGGGAAAAGATGGTGGAAA+AGG | + | chr4.1:60992917-60992936 | MS.gene68242:intron | 45.0% |
| !! | TAAGGGCATTCCACATCTCA+GGG | + | chr4.1:60996890-60996909 | MS.gene68242:intron | 45.0% |
| !!! | TCTCTTGTTTTGTATGGCGG+AGG | - | chr4.1:60996210-60996229 | None:intergenic | 45.0% |
| !! | AAAAAAAAAAAAAAACAAAA+TGG | + | chr4.1:60995037-60995056 | MS.gene68242:intron | 5.0% |
| !! | TATATATATATATCATTATA+TGG | - | chr4.1:60992701-60992720 | None:intergenic | 5.0% |
| !!! | ACTATTTTATTTTTAAATAT+CGG | + | chr4.1:60995267-60995286 | MS.gene68242:intron | 5.0% |
| AAAAGATCTGTGCGGCCAAG+AGG | - | chr4.1:60996165-60996184 | None:intergenic | 50.0% | |
| AACTCAGAGGAAACTGGTGG+TGG | + | chr4.1:60997186-60997205 | MS.gene68242:CDS | 50.0% | |
| AACTGTGCGAGACATCGTGA+AGG | + | chr4.1:60994736-60994755 | MS.gene68242:CDS | 50.0% | |
| ACATGCAAATGCAAGGGGTG+AGG | - | chr4.1:60995310-60995329 | None:intergenic | 50.0% | |
| ACCAAAGTCCCCGTGAAAAC+AGG | - | chr4.1:60994153-60994172 | None:intergenic | 50.0% | |
| ACCATGACAGCAGCATTCCT+TGG | + | chr4.1:60997127-60997146 | MS.gene68242:CDS | 50.0% | |
| AGGAAGAGACCAATGGAAGG+AGG | + | chr4.1:60997266-60997285 | MS.gene68242:CDS | 50.0% | |
| AGGTGCATGCTACGGTAGTA+TGG | + | chr4.1:60995642-60995661 | MS.gene68242:intron | 50.0% | |
| AGTCCAAGAGTAGCTGGACA+TGG | + | chr4.1:60992309-60992328 | MS.gene68242:CDS | 50.0% | |
| AGTTTCCTCTGAGTTGCCAC+CGG | - | chr4.1:60997181-60997200 | None:intergenic | 50.0% | |
| ATGACAGCAGCATTCCTTGG+CGG | + | chr4.1:60997130-60997149 | MS.gene68242:CDS | 50.0% | |
| ATGTAGCCAACCCCACTTCA+TGG | + | chr4.1:60993140-60993159 | MS.gene68242:intron | 50.0% | |
| CAACCCCACTTCATGGGATA+AGG | + | chr4.1:60993147-60993166 | MS.gene68242:intron | 50.0% | |
| CCAAGAGGTGGTTCCGAAAT+AGG | - | chr4.1:60996150-60996169 | None:intergenic | 50.0% | |
| CCACTTCATGGGATAAGGCT+TGG | + | chr4.1:60993152-60993171 | MS.gene68242:intron | 50.0% | |
| CCTATTTCGGAACCACCTCT+TGG | + | chr4.1:60996147-60996166 | MS.gene68242:CDS | 50.0% | |
| CTACAGCCCTTGGCATGTAT+TGG | + | chr4.1:60994497-60994516 | MS.gene68242:intron | 50.0% | |
| CTCAGGGCCACTAGTTCAAA+AGG | + | chr4.1:60996906-60996925 | MS.gene68242:intron | 50.0% | |
| CTTATCCCATGAAGTGGGGT+TGG | - | chr4.1:60993149-60993168 | None:intergenic | 50.0% | |
| GAAAAGGGGCTTAGGTGGTT+TGG | + | chr4.1:60992933-60992952 | MS.gene68242:intron | 50.0% | |
| GCAGCTGTTTGTTCTGTTGC+TGG | + | chr4.1:60997313-60997332 | MS.gene68242:CDS | 50.0% | |
| GCTGTCAAAGCAGTTGAAGG+AGG | + | chr4.1:60997214-60997233 | MS.gene68242:CDS | 50.0% | |
| GGATGGTAAGGTGCATGCTA+CGG | + | chr4.1:60995634-60995653 | MS.gene68242:intron | 50.0% | |
| GGCTGCAGTGATAACAGACA+TGG | - | chr4.1:60995392-60995411 | None:intergenic | 50.0% | |
| GTCCAAGAGTAGCTGGACAT+GGG | + | chr4.1:60992310-60992329 | MS.gene68242:CDS | 50.0% | |
| GTCCAGCTACTCTTGGACTT+GGG | - | chr4.1:60992308-60992327 | None:intergenic | 50.0% | |
| GTTGGCATGGTGACACAAAC+AGG | - | chr4.1:60997397-60997416 | None:intergenic | 50.0% | |
| TAGGCGACTCGAGTCATGTA+AGG | + | chr4.1:60996484-60996503 | MS.gene68242:intron | 50.0% | |
| TCAATGCAGCACGAGATGCT+GGG | + | chr4.1:60994179-60994198 | MS.gene68242:CDS | 50.0% | |
| TGAGCAGTGCCTTCCTTGAA+TGG | - | chr4.1:60993782-60993801 | None:intergenic | 50.0% | |
| TGTAGCCAACCCCACTTCAT+GGG | + | chr4.1:60993141-60993160 | MS.gene68242:intron | 50.0% | |
| TGTCCAGCTACTCTTGGACT+TGG | - | chr4.1:60992309-60992328 | None:intergenic | 50.0% | |
| TTCACGATGTCTCGCACAGT+TGG | - | chr4.1:60994737-60994756 | None:intergenic | 50.0% | |
| TTCACGGGGACTTTGGTTGT+AGG | + | chr4.1:60994156-60994175 | MS.gene68242:intron | 50.0% | |
| TTGGCTGATGAGCCAAAACG+TGG | + | chr4.1:60997343-60997362 | MS.gene68242:CDS | 50.0% | |
| TTTGGTAGGACCACCCTTTG+TGG | + | chr4.1:60993364-60993383 | MS.gene68242:intron | 50.0% | |
| ! | CCAAGCCTTATCCCATGAAG+TGG | - | chr4.1:60993155-60993174 | None:intergenic | 50.0% |
| ! | GGTGACACAAACAGGAGCAT+AGG | - | chr4.1:60997389-60997408 | None:intergenic | 50.0% |
| !! | AGATGGTGGAAAAGGGGCTT+AGG | + | chr4.1:60992925-60992944 | MS.gene68242:intron | 50.0% |
| !! | ATGAAGTGGGGTTGGCTACA+TGG | - | chr4.1:60993141-60993160 | None:intergenic | 50.0% |
| !! | TCAAGGAAGGCACTGCTCAA+TGG | + | chr4.1:60993783-60993802 | MS.gene68242:CDS | 50.0% |
| !! | TGCAATTCCTGACTCGGTGT+TGG | + | chr4.1:60996119-60996138 | MS.gene68242:CDS | 50.0% |
| !!! | TGGGGGAGGAGTTTTGTTCT+TGG | + | chr4.1:60993261-60993280 | MS.gene68242:intron | 50.0% |
| AGTCTATGGGGACTCGGAGT+TGG | + | chr4.1:60994694-60994713 | MS.gene68242:CDS | 55.0% | |
| CAATGCAGCACGAGATGCTG+GGG | + | chr4.1:60994180-60994199 | MS.gene68242:CDS | 55.0% | |
| CGCTTACGCATGTGCCCTAA+GGG | - | chr4.1:60994972-60994991 | None:intergenic | 55.0% | |
| GAACTAGTGGCCCTGAGATG+TGG | - | chr4.1:60996903-60996922 | None:intergenic | 55.0% | |
| GACCCATGTCCAGCTACTCT+TGG | - | chr4.1:60992315-60992334 | None:intergenic | 55.0% | |
| GCAAATGCAAGGGGTGAGGA+GGG | - | chr4.1:60995306-60995325 | None:intergenic | 55.0% | |
| GCCAAGGAATGCTGCTGTCA+TGG | - | chr4.1:60997131-60997150 | None:intergenic | 55.0% | |
| GGCAACTCAGAGGAAACTGG+TGG | + | chr4.1:60997183-60997202 | MS.gene68242:CDS | 55.0% | |
| GGTGAATCCAACACCGAGTC+AGG | - | chr4.1:60996129-60996148 | None:intergenic | 55.0% | |
| GGTGGCAACTCAGAGGAAAC+TGG | + | chr4.1:60997180-60997199 | MS.gene68242:CDS | 55.0% | |
| GTAGCTGGACATGGGTCCTT+TGG | + | chr4.1:60992318-60992337 | MS.gene68242:CDS | 55.0% | |
| GTCAATGCAGCACGAGATGC+TGG | + | chr4.1:60994178-60994197 | MS.gene68242:CDS | 55.0% | |
| GTCTATGGGGACTCGGAGTT+GGG | + | chr4.1:60994695-60994714 | MS.gene68242:CDS | 55.0% | |
| GTGCGAGACATCGTGAAGGT+GGG | + | chr4.1:60994740-60994759 | MS.gene68242:intron | 55.0% | |
| GTGTCACCATGCCAACAGCT+AGG | + | chr4.1:60997401-60997420 | MS.gene68242:CDS | 55.0% | |
| TGCAAATGCAAGGGGTGAGG+AGG | - | chr4.1:60995307-60995326 | None:intergenic | 55.0% | |
| TGCCCAAGTCCAAGAGTAGC+TGG | + | chr4.1:60992303-60992322 | MS.gene68242:CDS | 55.0% | |
| TGGTGGAAAAGGGGCTTAGG+TGG | + | chr4.1:60992928-60992947 | MS.gene68242:intron | 55.0% | |
| TGTGCGAGACATCGTGAAGG+TGG | + | chr4.1:60994739-60994758 | MS.gene68242:intron | 55.0% | |
| TTCCATTCAGCGCCTGGGAA+TGG | + | chr4.1:60995425-60995444 | MS.gene68242:CDS | 55.0% | |
| ! | CTGTGGTCTTACACGTCGTC+AGG | + | chr4.1:60994554-60994573 | MS.gene68242:CDS | 55.0% |
| ! | GCCTGTTTTCACGGGGACTT+TGG | + | chr4.1:60994149-60994168 | MS.gene68242:intron | 55.0% |
| ! | GCTTCAGGGGAACCACGTTT+TGG | - | chr4.1:60997358-60997377 | None:intergenic | 55.0% |
| ! | TGGACAGTGGAAGCGCAATG+CGG | + | chr4.1:60995445-60995464 | MS.gene68242:CDS | 55.0% |
| !! | GGGGCGCATGGTGTTATGAT+TGG | + | chr4.1:60994199-60994218 | MS.gene68242:CDS | 55.0% |
| AGATCTGTGCGGCCAAGAGG+TGG | - | chr4.1:60996162-60996181 | None:intergenic | 60.0% | |
| CGCTTCCACTGTCCATTCCC+AGG | - | chr4.1:60995440-60995459 | None:intergenic | 60.0% | |
| GCGCTTACGCATGTGCCCTA+AGG | - | chr4.1:60994973-60994992 | None:intergenic | 60.0% | |
| TCTGAGTTGCCACCGGAGAC+CGG | - | chr4.1:60997174-60997193 | None:intergenic | 60.0% | |
| !! | GTCCATTCCCAGGCGCTGAA+TGG | - | chr4.1:60995430-60995449 | None:intergenic | 60.0% |
| AGCCATCGCGAACCGGTCTC+CGG | + | chr4.1:60997159-60997178 | MS.gene68242:CDS | 65.0% | |
| CAGCGCCTGGGAATGGACAG+TGG | + | chr4.1:60995432-60995451 | MS.gene68242:CDS | 65.0% | |
| GCAGCTCAGCCATCGCGAAC+CGG | + | chr4.1:60997152-60997171 | MS.gene68242:CDS | 65.0% | |
| GGTCTCCGGTGGCAACTCAG+AGG | + | chr4.1:60997173-60997192 | MS.gene68242:CDS | 65.0% | |
| CATCGCGAACCGGTCTCCGG+TGG | + | chr4.1:60997162-60997181 | MS.gene68242:CDS | 70.0% | |
| CGATGGCTGAGCTGCCGCCA+AGG | - | chr4.1:60997147-60997166 | None:intergenic | 70.0% | |
| GCACGAGATGCTGGGGCGCA+TGG | + | chr4.1:60994187-60994206 | MS.gene68242:CDS | 70.0% | |
| !! | CACCGGAGACCGGTTCGCGA+TGG | - | chr4.1:60997164-60997183 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 60991645 | 60997438 | 60991645 | ID=MS.gene68242 |
| chr4.1 | mRNA | 60991645 | 60997438 | 60991645 | ID=MS.gene68242.t1;Parent=MS.gene68242 |
| chr4.1 | exon | 60991645 | 60991761 | 60991645 | ID=MS.gene68242.t1.exon1;Parent=MS.gene68242.t1 |
| chr4.1 | CDS | 60991645 | 60991761 | 60991645 | ID=cds.MS.gene68242.t1;Parent=MS.gene68242.t1 |
| chr4.1 | exon | 60992079 | 60992206 | 60992079 | ID=MS.gene68242.t1.exon2;Parent=MS.gene68242.t1 |
| chr4.1 | CDS | 60992079 | 60992206 | 60992079 | ID=cds.MS.gene68242.t1;Parent=MS.gene68242.t1 |
| chr4.1 | exon | 60992296 | 60992365 | 60992296 | ID=MS.gene68242.t1.exon3;Parent=MS.gene68242.t1 |
| chr4.1 | CDS | 60992296 | 60992365 | 60992296 | ID=cds.MS.gene68242.t1;Parent=MS.gene68242.t1 |
| chr4.1 | exon | 60992474 | 60992576 | 60992474 | ID=MS.gene68242.t1.exon4;Parent=MS.gene68242.t1 |
| chr4.1 | CDS | 60992474 | 60992576 | 60992474 | ID=cds.MS.gene68242.t1;Parent=MS.gene68242.t1 |
| chr4.1 | exon | 60993727 | 60993864 | 60993727 | ID=MS.gene68242.t1.exon5;Parent=MS.gene68242.t1 |
| chr4.1 | CDS | 60993727 | 60993864 | 60993727 | ID=cds.MS.gene68242.t1;Parent=MS.gene68242.t1 |
| chr4.1 | exon | 60993979 | 60994022 | 60993979 | ID=MS.gene68242.t1.exon6;Parent=MS.gene68242.t1 |
| chr4.1 | CDS | 60993979 | 60994022 | 60993979 | ID=cds.MS.gene68242.t1;Parent=MS.gene68242.t1 |
| chr4.1 | exon | 60994178 | 60994239 | 60994178 | ID=MS.gene68242.t1.exon7;Parent=MS.gene68242.t1 |
| chr4.1 | CDS | 60994178 | 60994239 | 60994178 | ID=cds.MS.gene68242.t1;Parent=MS.gene68242.t1 |
| chr4.1 | exon | 60994503 | 60994575 | 60994503 | ID=MS.gene68242.t1.exon8;Parent=MS.gene68242.t1 |
| chr4.1 | CDS | 60994503 | 60994575 | 60994503 | ID=cds.MS.gene68242.t1;Parent=MS.gene68242.t1 |
| chr4.1 | exon | 60994677 | 60994757 | 60994677 | ID=MS.gene68242.t1.exon9;Parent=MS.gene68242.t1 |
| chr4.1 | CDS | 60994677 | 60994757 | 60994677 | ID=cds.MS.gene68242.t1;Parent=MS.gene68242.t1 |
| chr4.1 | exon | 60995410 | 60995490 | 60995410 | ID=MS.gene68242.t1.exon10;Parent=MS.gene68242.t1 |
| chr4.1 | CDS | 60995410 | 60995490 | 60995410 | ID=cds.MS.gene68242.t1;Parent=MS.gene68242.t1 |
| chr4.1 | exon | 60996087 | 60996233 | 60996087 | ID=MS.gene68242.t1.exon11;Parent=MS.gene68242.t1 |
| chr4.1 | CDS | 60996087 | 60996233 | 60996087 | ID=cds.MS.gene68242.t1;Parent=MS.gene68242.t1 |
| chr4.1 | exon | 60997097 | 60997438 | 60997097 | ID=MS.gene68242.t1.exon12;Parent=MS.gene68242.t1 |
| chr4.1 | CDS | 60997097 | 60997438 | 60997097 | ID=cds.MS.gene68242.t1;Parent=MS.gene68242.t1 |
| Gene Sequence |
| Protein sequence |
