Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75083.t1 | XP_003620935.1 | 99.2 | 245 | 2 | 0 | 1 | 245 | 64 | 308 | 6.40E-138 | 500 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75083.t1 | G7KJU8 | 99.2 | 245 | 2 | 0 | 1 | 245 | 64 | 308 | 4.6e-138 | 500.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene75083 | 0.802766 | 4.80E-49 | -1.69E-46 |
| MS.gene049171 | MS.gene75083 | 0.864992 | 8.16E-65 | -1.69E-46 |
| MS.gene049217 | MS.gene75083 | 0.821169 | 4.66E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene75083 | 0.849136 | 3.93E-60 | -1.69E-46 |
| MS.gene049285 | MS.gene75083 | 0.855649 | 5.48E-62 | -1.69E-46 |
| MS.gene049320 | MS.gene75083 | 0.838889 | 2.20E-57 | -1.69E-46 |
| MS.gene049609 | MS.gene75083 | 0.843673 | 1.21E-58 | -1.69E-46 |
| MS.gene049633 | MS.gene75083 | 0.8671 | 1.75E-65 | -1.69E-46 |
| MS.gene05010 | MS.gene75083 | 0.821103 | 4.82E-53 | -1.69E-46 |
| MS.gene050163 | MS.gene75083 | 0.82971 | 4.42E-55 | -1.69E-46 |
| MS.gene050165 | MS.gene75083 | 0.831246 | 1.86E-55 | -1.69E-46 |
| MS.gene050170 | MS.gene75083 | 0.874787 | 5.14E-68 | -1.69E-46 |
| MS.gene050323 | MS.gene75083 | 0.847641 | 1.02E-59 | -1.69E-46 |
| MS.gene050333 | MS.gene75083 | 0.836639 | 8.32E-57 | -1.69E-46 |
| MS.gene050444 | MS.gene75083 | 0.847242 | 1.31E-59 | -1.69E-46 |
| MS.gene050496 | MS.gene75083 | 0.863398 | 2.56E-64 | -1.69E-46 |
| MS.gene050504 | MS.gene75083 | 0.855173 | 7.53E-62 | -1.69E-46 |
| MS.gene050518 | MS.gene75083 | 0.817691 | 2.89E-52 | -1.69E-46 |
| MS.gene050577 | MS.gene75083 | 0.824875 | 6.37E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene75083 | 0.85466 | 1.06E-61 | -1.69E-46 |
| MS.gene050675 | MS.gene75083 | 0.855448 | 6.27E-62 | -1.69E-46 |
| MS.gene050699 | MS.gene75083 | 0.847305 | 1.26E-59 | -1.69E-46 |
| MS.gene050747 | MS.gene75083 | 0.82583 | 3.78E-54 | -1.69E-46 |
| MS.gene050772 | MS.gene75083 | 0.857027 | 2.16E-62 | -1.69E-46 |
| MS.gene05080 | MS.gene75083 | 0.857845 | 1.24E-62 | -1.69E-46 |
| MS.gene050868 | MS.gene75083 | 0.856081 | 4.09E-62 | -1.69E-46 |
| MS.gene050871 | MS.gene75083 | 0.853064 | 3.06E-61 | -1.69E-46 |
| MS.gene050876 | MS.gene75083 | 0.852472 | 4.51E-61 | -1.69E-46 |
| MS.gene050904 | MS.gene75083 | 0.868717 | 5.31E-66 | -1.69E-46 |
| MS.gene050950 | MS.gene75083 | 0.822419 | 2.39E-53 | -1.69E-46 |
| MS.gene050986 | MS.gene75083 | 0.822021 | 2.96E-53 | -1.69E-46 |
| MS.gene051138 | MS.gene75083 | -0.801018 | 1.10E-48 | -1.69E-46 |
| MS.gene051268 | MS.gene75083 | 0.838963 | 2.10E-57 | -1.69E-46 |
| MS.gene051317 | MS.gene75083 | 0.855225 | 7.28E-62 | -1.69E-46 |
| MS.gene051438 | MS.gene75083 | 0.824227 | 9.05E-54 | -1.69E-46 |
| MS.gene051810 | MS.gene75083 | 0.823037 | 1.72E-53 | -1.69E-46 |
| MS.gene051838 | MS.gene75083 | 0.83763 | 4.64E-57 | -1.69E-46 |
| MS.gene051858 | MS.gene75083 | 0.84788 | 8.74E-60 | -1.69E-46 |
| MS.gene051874 | MS.gene75083 | 0.843646 | 1.23E-58 | -1.69E-46 |
| MS.gene051941 | MS.gene75083 | 0.809547 | 1.79E-50 | -1.69E-46 |
| MS.gene051949 | MS.gene75083 | 0.847568 | 1.06E-59 | -1.69E-46 |
| MS.gene052129 | MS.gene75083 | -0.815678 | 8.17E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene75083 | 0.839003 | 2.06E-57 | -1.69E-46 |
| MS.gene052486 | MS.gene75083 | 0.800081 | 1.70E-48 | -1.69E-46 |
| MS.gene052503 | MS.gene75083 | 0.809888 | 1.51E-50 | -1.69E-46 |
| MS.gene052506 | MS.gene75083 | 0.82879 | 7.39E-55 | -1.69E-46 |
| MS.gene052615 | MS.gene75083 | 0.820889 | 5.40E-53 | -1.69E-46 |
| MS.gene052822 | MS.gene75083 | 0.840136 | 1.04E-57 | -1.69E-46 |
| MS.gene052823 | MS.gene75083 | 0.801679 | 8.04E-49 | -1.69E-46 |
| MS.gene052825 | MS.gene75083 | 0.802494 | 5.46E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene75083 | 0.860916 | 1.48E-63 | -1.69E-46 |
| MS.gene052872 | MS.gene75083 | 0.877136 | 8.00E-69 | -1.69E-46 |
| MS.gene052916 | MS.gene75083 | 0.822322 | 2.52E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene75083 | 0.840748 | 7.21E-58 | -1.69E-46 |
| MS.gene053009 | MS.gene75083 | 0.812436 | 4.24E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene75083 | 0.851196 | 1.04E-60 | -1.69E-46 |
| MS.gene053207 | MS.gene75083 | 0.81413 | 1.80E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene75083 | 0.813133 | 2.99E-51 | -1.69E-46 |
| MS.gene053284 | MS.gene75083 | 0.815635 | 8.36E-52 | -1.69E-46 |
| MS.gene053285 | MS.gene75083 | 0.813819 | 2.11E-51 | -1.69E-46 |
| MS.gene053286 | MS.gene75083 | 0.811694 | 6.16E-51 | -1.69E-46 |
| MS.gene053420 | MS.gene75083 | -0.800573 | 1.35E-48 | -1.69E-46 |
| MS.gene053479 | MS.gene75083 | 0.857564 | 1.50E-62 | -1.69E-46 |
| MS.gene053480 | MS.gene75083 | 0.823155 | 1.61E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene75083 | 0.817836 | 2.68E-52 | -1.69E-46 |
| MS.gene053626 | MS.gene75083 | 0.804257 | 2.36E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene75083 | 0.834137 | 3.57E-56 | -1.69E-46 |
| MS.gene053824 | MS.gene75083 | 0.891823 | 2.79E-74 | -1.69E-46 |
| MS.gene053916 | MS.gene75083 | 0.852461 | 4.55E-61 | -1.69E-46 |
| MS.gene054344 | MS.gene75083 | 0.821628 | 3.65E-53 | -1.69E-46 |
| MS.gene054408 | MS.gene75083 | 0.811029 | 8.59E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene75083 | 0.806523 | 7.89E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene75083 | 0.834354 | 3.15E-56 | -1.69E-46 |
| MS.gene054642 | MS.gene75083 | 0.818085 | 2.36E-52 | -1.69E-46 |
| MS.gene054706 | MS.gene75083 | -0.801201 | 1.01E-48 | -1.69E-46 |
| MS.gene05470 | MS.gene75083 | 0.857316 | 1.77E-62 | -1.69E-46 |
| MS.gene054884 | MS.gene75083 | -0.802096 | 6.60E-49 | -1.69E-46 |
| MS.gene05494 | MS.gene75083 | 0.866779 | 2.22E-65 | -1.69E-46 |
| MS.gene054954 | MS.gene75083 | 0.847369 | 1.21E-59 | -1.69E-46 |
| MS.gene05505 | MS.gene75083 | 0.807433 | 5.07E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene75083 | 0.825965 | 3.51E-54 | -1.69E-46 |
| MS.gene055224 | MS.gene75083 | 0.837336 | 5.52E-57 | -1.69E-46 |
| MS.gene055362 | MS.gene75083 | 0.850086 | 2.13E-60 | -1.69E-46 |
| MS.gene055502 | MS.gene75083 | 0.838846 | 2.26E-57 | -1.69E-46 |
| MS.gene055577 | MS.gene75083 | 0.879252 | 1.45E-69 | -1.69E-46 |
| MS.gene055722 | MS.gene75083 | 0.836515 | 8.94E-57 | -1.69E-46 |
| MS.gene055748 | MS.gene75083 | 0.866842 | 2.12E-65 | -1.69E-46 |
| MS.gene055750 | MS.gene75083 | 0.861316 | 1.12E-63 | -1.69E-46 |
| MS.gene055751 | MS.gene75083 | 0.873771 | 1.14E-67 | -1.69E-46 |
| MS.gene055776 | MS.gene75083 | 0.810875 | 9.27E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene75083 | 0.858026 | 1.09E-62 | -1.69E-46 |
| MS.gene055941 | MS.gene75083 | 0.82782 | 1.27E-54 | -1.69E-46 |
| MS.gene056083 | MS.gene75083 | 0.802868 | 4.57E-49 | -1.69E-46 |
| MS.gene056283 | MS.gene75083 | 0.807366 | 5.24E-50 | -1.69E-46 |
| MS.gene056387 | MS.gene75083 | 0.823217 | 1.56E-53 | -1.69E-46 |
| MS.gene056409 | MS.gene75083 | 0.820139 | 8.03E-53 | -1.69E-46 |
| MS.gene056449 | MS.gene75083 | 0.83659 | 8.56E-57 | -1.69E-46 |
| MS.gene056504 | MS.gene75083 | 0.85483 | 9.48E-62 | -1.69E-46 |
| MS.gene056510 | MS.gene75083 | 0.839988 | 1.14E-57 | -1.69E-46 |
| MS.gene056610 | MS.gene75083 | 0.807636 | 4.59E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene75083 | 0.834356 | 3.14E-56 | -1.69E-46 |
| MS.gene056692 | MS.gene75083 | 0.840001 | 1.13E-57 | -1.69E-46 |
| MS.gene056856 | MS.gene75083 | -0.802845 | 4.62E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene75083 | 0.827289 | 1.70E-54 | -1.69E-46 |
| MS.gene057331 | MS.gene75083 | 0.801942 | 7.10E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene75083 | 0.801915 | 7.19E-49 | -1.69E-46 |
| MS.gene057658 | MS.gene75083 | 0.825481 | 4.58E-54 | -1.69E-46 |
| MS.gene057831 | MS.gene75083 | 0.823885 | 1.09E-53 | -1.69E-46 |
| MS.gene057857 | MS.gene75083 | 0.841251 | 5.32E-58 | -1.69E-46 |
| MS.gene058130 | MS.gene75083 | 0.805568 | 1.25E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene75083 | 0.836316 | 1.00E-56 | -1.69E-46 |
| MS.gene05837 | MS.gene75083 | 0.849467 | 3.17E-60 | -1.69E-46 |
| MS.gene058419 | MS.gene75083 | 0.846642 | 1.91E-59 | -1.69E-46 |
| MS.gene058544 | MS.gene75083 | 0.808181 | 3.51E-50 | -1.69E-46 |
| MS.gene058723 | MS.gene75083 | 0.865171 | 7.17E-65 | -1.69E-46 |
| MS.gene058773 | MS.gene75083 | 0.859422 | 4.18E-63 | -1.69E-46 |
| MS.gene058838 | MS.gene75083 | 0.865689 | 4.92E-65 | -1.69E-46 |
| MS.gene059022 | MS.gene75083 | 0.855486 | 6.11E-62 | -1.69E-46 |
| MS.gene059023 | MS.gene75083 | 0.887893 | 9.56E-73 | -1.69E-46 |
| MS.gene059079 | MS.gene75083 | 0.804502 | 2.10E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene75083 | 0.807839 | 4.16E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene75083 | 0.807069 | 6.05E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene75083 | 0.866075 | 3.72E-65 | -1.69E-46 |
| MS.gene059718 | MS.gene75083 | 0.863203 | 2.94E-64 | -1.69E-46 |
| MS.gene059756 | MS.gene75083 | 0.851812 | 6.96E-61 | -1.69E-46 |
| MS.gene059865 | MS.gene75083 | 0.841413 | 4.82E-58 | -1.69E-46 |
| MS.gene059902 | MS.gene75083 | 0.837676 | 4.52E-57 | -1.69E-46 |
| MS.gene06000 | MS.gene75083 | 0.844249 | 8.50E-59 | -1.69E-46 |
| MS.gene06027 | MS.gene75083 | 0.800694 | 1.28E-48 | -1.69E-46 |
| MS.gene060703 | MS.gene75083 | 0.815287 | 9.99E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene75083 | 0.871347 | 7.32E-67 | -1.69E-46 |
| MS.gene060778 | MS.gene75083 | 0.836519 | 8.92E-57 | -1.69E-46 |
| MS.gene06077 | MS.gene75083 | 0.842275 | 2.86E-58 | -1.69E-46 |
| MS.gene06092 | MS.gene75083 | 0.811266 | 7.63E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene75083 | 0.86323 | 2.89E-64 | -1.69E-46 |
| MS.gene06111 | MS.gene75083 | 0.811347 | 7.33E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene75083 | 0.859802 | 3.21E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75083.t1 | MTR_6g092630 | 99.184 | 245 | 2 | 0 | 1 | 245 | 64 | 308 | 0.0 | 506 |
| MS.gene75083.t1 | MTR_6g092630 | 98.649 | 222 | 3 | 0 | 1 | 222 | 64 | 285 | 2.81e-165 | 459 |
| MS.gene75083.t1 | MTR_7g032900 | 40.000 | 205 | 117 | 2 | 32 | 234 | 53 | 253 | 3.26e-46 | 155 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75083.t1 | AT4G29590 | 85.294 | 238 | 35 | 0 | 5 | 242 | 77 | 314 | 1.71e-154 | 432 |
| MS.gene75083.t1 | AT3G01660 | 44.944 | 178 | 94 | 1 | 49 | 226 | 63 | 236 | 1.14e-49 | 164 |
Find 66 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCAGAGCAATTCCCCTTTA+AGG | 0.183158 | 6.3:-84003736 | MS.gene75083:CDS |
| TTGGAAATCCTCCTCCTTAA+AGG | 0.202462 | 6.3:+84003722 | None:intergenic |
| TCTTCAATTCTTCTTCATTC+AGG | 0.212937 | 6.3:+84003024 | None:intergenic |
| TACTCCTGGAGTAAGCATTT+TGG | 0.244912 | 6.3:-84003203 | MS.gene75083:CDS |
| ATCACTAACATGTCTGCTTC+TGG | 0.261998 | 6.3:-84004398 | None:intergenic |
| TCACAAAAGCCATTTCTATA+TGG | 0.289442 | 6.3:-84001363 | MS.gene75083:CDS |
| AACTCGTTCTTGCTTGTATC+CGG | 0.295022 | 6.3:+84003058 | None:intergenic |
| TATCTTCAAATGAGAGTTTA+GGG | 0.299222 | 6.3:+84002573 | None:intergenic |
| GGATCCGAGCGTCCAGGATT+TGG | 0.308011 | 6.3:+84000705 | None:intergenic |
| TTATCTTCAAATGAGAGTTT+AGG | 0.310263 | 6.3:+84002572 | None:intergenic |
| ACAAGATTGTCACCTCATTA+TGG | 0.338362 | 6.3:+84002003 | None:intergenic |
| TGGAAATCCTCCTCCTTAAA+GGG | 0.361434 | 6.3:+84003723 | None:intergenic |
| ATTTCTATATGGACATCAAC+TGG | 0.365651 | 6.3:-84001352 | MS.gene75083:CDS |
| GCTTGTATCCGGGTGGAAAA+TGG | 0.376192 | 6.3:+84003069 | None:intergenic |
| GCTGATCATGTTATGATTGT+TGG | 0.389982 | 6.3:-84001325 | MS.gene75083:CDS |
| CGCTGGTCCCTCTGTTGATC+AGG | 0.393668 | 6.3:-84004342 | MS.gene75083:intron |
| AAATATCAAGAGGCTTTGTT+AGG | 0.413369 | 6.3:+84002065 | None:intergenic |
| CAAGAACGAGTTGTAGGATT+AGG | 0.428759 | 6.3:-84003047 | MS.gene75083:CDS |
| TTAGTCAGAGCAGCAATTGC+AGG | 0.435836 | 6.3:+84003256 | None:intergenic |
| TCCTTAAAGGGGAATTGCTC+TGG | 0.443401 | 6.3:+84003735 | None:intergenic |
| CTCATTATGGCCAATCCACC+TGG | 0.452281 | 6.3:+84002016 | None:intergenic |
| CCTAGAGTACACAATGTACA+TGG | 0.454718 | 6.3:+84000683 | None:intergenic |
| ATTGCTAGGTGGGAAAACTT+TGG | 0.475531 | 6.3:+84003225 | None:intergenic |
| ACTCGTTCTTGCTTGTATCC+GGG | 0.477291 | 6.3:+84003059 | None:intergenic |
| TTTGGATATGTGTAGCAGTT+GGG | 0.481811 | 6.3:-84003185 | MS.gene75083:intron |
| CCATGTACATTGTGTACTCT+AGG | 0.489987 | 6.3:-84000683 | MS.gene75083:CDS |
| TATTCTTGCAGAAGCAATGA+AGG | 0.493095 | 6.3:+84004367 | None:intergenic |
| AGTTGATGTCCATATAGAAA+TGG | 0.494350 | 6.3:+84001354 | None:intergenic |
| GATACTCAAACCAGGTGGAT+TGG | 0.498043 | 6.3:-84002026 | MS.gene75083:CDS |
| ATCTCCAAATCCTGGACGCT+CGG | 0.500867 | 6.3:-84000709 | MS.gene75083:CDS |
| GCAATTCCCCTTTAAGGAGG+AGG | 0.507491 | 6.3:-84003730 | MS.gene75083:CDS |
| CTCCAGGAGTATTGCTAGGT+GGG | 0.522868 | 6.3:+84003215 | None:intergenic |
| GTGGATATATCTCCAAATCC+TGG | 0.525108 | 6.3:-84000717 | MS.gene75083:CDS |
| TTTGTAGATATTGAAGAATG+TGG | 0.529167 | 6.3:-84003763 | MS.gene75083:intron |
| AGGAGGATTTGAACCTCCTC+AGG | 0.530086 | 6.3:-84001284 | MS.gene75083:intron |
| TTCCCACCTAGCAATACTCC+TGG | 0.531377 | 6.3:-84003217 | MS.gene75083:CDS |
| TACAAGCAAGAACGAGTTGT+AGG | 0.540637 | 6.3:-84003053 | MS.gene75083:CDS |
| TTTCTATATGGACATCAACT+GGG | 0.551124 | 6.3:-84001351 | MS.gene75083:CDS |
| GAACTTACTCATCATAACGT+TGG | 0.551670 | 6.3:+84003703 | None:intergenic |
| CGGTTCATATTTCTCTTATG+CGG | 0.573737 | 6.3:+84000650 | None:intergenic |
| CATTGTGTACTCTAGGAAGC+TGG | 0.575042 | 6.3:-84000676 | MS.gene75083:CDS |
| TACATGGGATCCGAGCGTCC+AGG | 0.578450 | 6.3:+84000699 | None:intergenic |
| ATCTCCTTGAAAATATCAAG+AGG | 0.587722 | 6.3:+84002055 | None:intergenic |
| GTTGCTGCTGTAGGTCCTCA+CGG | 0.588581 | 6.3:-84002624 | MS.gene75083:intron |
| ATATCCAAAATGCTTACTCC+AGG | 0.588855 | 6.3:+84003199 | None:intergenic |
| TAGTCAGAGCAGCAATTGCA+GGG | 0.591972 | 6.3:+84003257 | None:intergenic |
| CTTACTCCAGGAGTATTGCT+AGG | 0.592913 | 6.3:+84003211 | None:intergenic |
| CAGGTGGATTGGCCATAATG+AGG | 0.601130 | 6.3:-84002015 | MS.gene75083:intron |
| AGAAGAATTGAAGAGAAACC+CGG | 0.609792 | 6.3:-84003015 | MS.gene75083:intron |
| GCTTCTGCAAGAATAACCGC+TGG | 0.613481 | 6.3:-84004359 | MS.gene75083:CDS |
| CGTTCTTGCTTGTATCCGGG+TGG | 0.620983 | 6.3:+84003062 | None:intergenic |
| GGAAATCCTCCTCCTTAAAG+GGG | 0.624737 | 6.3:+84003724 | None:intergenic |
| ACTGAGGGAATTACCTGAGG+AGG | 0.631015 | 6.3:+84001271 | None:intergenic |
| TTTCGATGTCATCACTAATG+TGG | 0.633015 | 6.3:-84002546 | MS.gene75083:intron |
| TCGATGTGTGTTACGAATCG+AGG | 0.637675 | 6.3:+84003283 | None:intergenic |
| AGACATACCTGATCAACAGA+GGG | 0.639259 | 6.3:+84004335 | None:intergenic |
| AGAGCAATTCCCCTTTAAGG+AGG | 0.643048 | 6.3:-84003733 | MS.gene75083:CDS |
| ACTCCAGGAGTATTGCTAGG+TGG | 0.650096 | 6.3:+84003214 | None:intergenic |
| TTCTATATGGACATCAACTG+GGG | 0.655820 | 6.3:-84001350 | MS.gene75083:CDS |
| CTAGAGTACACAATGTACAT+GGG | 0.677895 | 6.3:+84000684 | None:intergenic |
| AGATATTGAAGAATGTGGAA+TGG | 0.686438 | 6.3:-84003758 | MS.gene75083:CDS |
| CTGATCAACAGAGGGACCAG+CGG | 0.689416 | 6.3:+84004343 | None:intergenic |
| ATGAATAGGATACTCAAACC+AGG | 0.689498 | 6.3:-84002034 | MS.gene75083:CDS |
| TAGACATACCTGATCAACAG+AGG | 0.690552 | 6.3:+84004334 | None:intergenic |
| AATAGGATACTCAAACCAGG+TGG | 0.725097 | 6.3:-84002031 | MS.gene75083:CDS |
| CTTGTACAGTATACTCCGTG+AGG | 0.730572 | 6.3:+84002609 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAACTAACAAAAATTAA+GGG | + | chr6.3:84001693-84001712 | None:intergenic | 10.0% |
| !!! | ATTTTGAATAAATATATACT+TGG | + | chr6.3:84002118-84002137 | None:intergenic | 10.0% |
| !! | AAAAACTAACAAAAATTAAG+GGG | + | chr6.3:84001692-84001711 | None:intergenic | 15.0% |
| !! | AAATATTAGTTATTACAAAG+AGG | + | chr6.3:84004099-84004118 | None:intergenic | 15.0% |
| !! | AATATTAGTTATTACAAAGA+GGG | + | chr6.3:84004098-84004117 | None:intergenic | 15.0% |
| !! | AGACTTATATTCTTATTATT+CGG | - | chr6.3:84004067-84004086 | MS.gene75083:intron | 15.0% |
| !! | GTAAAAACTAACAAAAATTA+AGG | + | chr6.3:84001694-84001713 | None:intergenic | 15.0% |
| !! | TTAATTAAAAAACAATGACT+TGG | - | chr6.3:84002335-84002354 | MS.gene75083:intron | 15.0% |
| !!! | ATAATTTTTGTTAGATTGTT+TGG | + | chr6.3:84001580-84001599 | None:intergenic | 15.0% |
| !!! | GATGTTATTTTATCTATTAT+TGG | - | chr6.3:84003593-84003612 | MS.gene75083:intron | 15.0% |
| !!! | TTTTCATCTTAAATTACTAT+CGG | + | chr6.3:84000819-84000838 | None:intergenic | 15.0% |
| !! | AAAACTAACAAAAATTAAGG+GGG | + | chr6.3:84001691-84001710 | None:intergenic | 20.0% |
| !! | ATAAAGGTAGAATTGAAAAT+TGG | - | chr6.3:84001213-84001232 | MS.gene75083:intron | 20.0% |
| !! | ATAAATCTTTACTTTGCATT+AGG | - | chr6.3:84001958-84001977 | MS.gene75083:intron | 20.0% |
| !! | ATTCTTCAATATCTACAAAA+AGG | + | chr6.3:84001290-84001309 | None:intergenic | 20.0% |
| !! | CTTGTTAATAGTTATATCTT+AGG | - | chr6.3:84002683-84002702 | MS.gene75083:intron | 20.0% |
| !! | TAACATCAAAAACCAATAAA+TGG | + | chr6.3:84003580-84003599 | None:intergenic | 20.0% |
| !! | TGTATGTAAAGAAAATAGAT+TGG | - | chr6.3:84002816-84002835 | MS.gene75083:intron | 20.0% |
| !!! | AAGAAAATTCTGTTTTCTAT+AGG | + | chr6.3:84004207-84004226 | None:intergenic | 20.0% |
| !!! | AGAAAATTCTGTTTTCTATA+GGG | + | chr6.3:84004206-84004225 | None:intergenic | 20.0% |
| !!! | ATATATTTTAACTTCGGTAT+TGG | - | chr6.3:84002546-84002565 | MS.gene75083:intron | 20.0% |
| !!! | ATTTGTTCATAAGTTGTTTT+CGG | + | chr6.3:84001545-84001564 | None:intergenic | 20.0% |
| !!! | CTCTTCATATATTTTAACTT+CGG | - | chr6.3:84002540-84002559 | MS.gene75083:intron | 20.0% |
| !!! | TTATATTTTCCGATTTTGTT+AGG | - | chr6.3:84003805-84003824 | MS.gene75083:intron | 20.0% |
| !!! | TTTATTTTAAACCATACCAT+TGG | + | chr6.3:84004152-84004171 | None:intergenic | 20.0% |
| ! | AAAATCGGAAAATATAACTG+AGG | + | chr6.3:84003802-84003821 | None:intergenic | 25.0% |
| ! | AAATCGGAAAATATAACTGA+GGG | + | chr6.3:84003801-84003820 | None:intergenic | 25.0% |
| ! | AACTATACTTTGGTTATGTT+TGG | - | chr6.3:84001378-84001397 | MS.gene75083:CDS | 25.0% |
| ! | AAGTTCAAACAACTATACTT+TGG | - | chr6.3:84001368-84001387 | MS.gene75083:CDS | 25.0% |
| ! | AGCAACAATTTCTATCAATA+AGG | + | chr6.3:84002416-84002435 | None:intergenic | 25.0% |
| ! | ATAACAGAACTATAACATAG+AGG | + | chr6.3:84002203-84002222 | None:intergenic | 25.0% |
| ! | CAATCTAGAAAAGTAATCTT+AGG | + | chr6.3:84002254-84002273 | None:intergenic | 25.0% |
| ! | GACTTATTTCAACTTATCTA+TGG | + | chr6.3:84001604-84001623 | None:intergenic | 25.0% |
| ! | TATCTTCAAATGAGAGTTTA+GGG | + | chr6.3:84002484-84002503 | None:intergenic | 25.0% |
| ! | TCTGTGTTAAGAAATTGATA+TGG | - | chr6.3:84003270-84003289 | MS.gene75083:CDS | 25.0% |
| ! | TGAAATATGCAATGAAAAGA+AGG | + | chr6.3:84000760-84000779 | None:intergenic | 25.0% |
| ! | TGATTCATATATAATGCATG+AGG | + | chr6.3:84003970-84003989 | None:intergenic | 25.0% |
| ! | TTAGGATACCAAATTCAAAA+TGG | + | chr6.3:84002236-84002255 | None:intergenic | 25.0% |
| ! | TTATCTTCAAATGAGAGTTT+AGG | + | chr6.3:84002485-84002504 | None:intergenic | 25.0% |
| ! | TTTGTAGATATTGAAGAATG+TGG | - | chr6.3:84001291-84001310 | MS.gene75083:CDS | 25.0% |
| !! | ATATCTACAAAAAGGTATAG+TGG | + | chr6.3:84001282-84001301 | None:intergenic | 25.0% |
| !! | ATATTTAGTTCGACTTCTAA+AGG | - | chr6.3:84000930-84000949 | MS.gene75083:intron | 25.0% |
| !! | ATGGTTTAAAATAAAGCAGA+AGG | - | chr6.3:84004157-84004176 | MS.gene75083:intron | 25.0% |
| !! | GAAAATTCTGTTTTCTATAG+GGG | + | chr6.3:84004205-84004224 | None:intergenic | 25.0% |
| !! | GATTAGTTATTAACATACTG+AGG | - | chr6.3:84004126-84004145 | MS.gene75083:intron | 25.0% |
| !! | TATCAGAAAATTTTCCCTTT+AGG | - | chr6.3:84001721-84001740 | MS.gene75083:intron | 25.0% |
| !! | TATCTACAAAAAGGTATAGT+GGG | + | chr6.3:84001281-84001300 | None:intergenic | 25.0% |
| !! | TATGTTATAGTTCTGTTATG+TGG | - | chr6.3:84002204-84002223 | MS.gene75083:intron | 25.0% |
| !! | TATTTAGTTCGACTTCTAAA+GGG | - | chr6.3:84000931-84000950 | MS.gene75083:intron | 25.0% |
| !!! | ATATTTTCAAGGAGATGAAT+AGG | - | chr6.3:84003006-84003025 | MS.gene75083:intron | 25.0% |
| !!! | CTAAGATTACTTTTCTAGAT+TGG | - | chr6.3:84002252-84002271 | MS.gene75083:intron | 25.0% |
| !!! | TTATCCTTTTAAGTGTGAAT+TGG | + | chr6.3:84003350-84003369 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTTGGGATACG+AGG | + | chr6.3:84003883-84003902 | None:intergenic | 25.0% |
| AAAAATTAAGGGGGTAATTG+GGG | + | chr6.3:84001682-84001701 | None:intergenic | 30.0% | |
| AAGTAATTCCGAAATGATAG+CGG | + | chr6.3:84003077-84003096 | None:intergenic | 30.0% | |
| AAGTTCTTCAAGATAGCTTA+TGG | + | chr6.3:84001511-84001530 | None:intergenic | 30.0% | |
| AATGTAATTACATGCGTAGT+CGG | - | chr6.3:84000850-84000869 | MS.gene75083:intron | 30.0% | |
| ACAAAAATTAAGGGGGTAAT+TGG | + | chr6.3:84001684-84001703 | None:intergenic | 30.0% | |
| AGAAGTAAAGTATGCAACAA+AGG | + | chr6.3:84003928-84003947 | None:intergenic | 30.0% | |
| AGATATTGAAGAATGTGGAA+TGG | - | chr6.3:84001296-84001315 | MS.gene75083:CDS | 30.0% | |
| ATCTCCTTGAAAATATCAAG+AGG | + | chr6.3:84003002-84003021 | None:intergenic | 30.0% | |
| ATTTCTATATGGACATCAAC+TGG | - | chr6.3:84003702-84003721 | MS.gene75083:intron | 30.0% | |
| CAAAAATTAAGGGGGTAATT+GGG | + | chr6.3:84001683-84001702 | None:intergenic | 30.0% | |
| CAACGCAAATTCAAACATAA+AGG | - | chr6.3:84001197-84001216 | MS.gene75083:intron | 30.0% | |
| CAATCCAATTCACACTTAAA+AGG | - | chr6.3:84003343-84003362 | MS.gene75083:intron | 30.0% | |
| CTTAAATGTAAGATCCTGTT+TGG | + | chr6.3:84001630-84001649 | None:intergenic | 30.0% | |
| GAAGTAAAGTATGCAACAAA+GGG | + | chr6.3:84003927-84003946 | None:intergenic | 30.0% | |
| GATGATATCAATGCAAGTAT+CGG | - | chr6.3:84002774-84002793 | MS.gene75083:intron | 30.0% | |
| TCACAAAAGCCATTTCTATA+TGG | - | chr6.3:84003691-84003710 | MS.gene75083:intron | 30.0% | |
| TCTTCAATTCTTCTTCATTC+AGG | + | chr6.3:84002033-84002052 | None:intergenic | 30.0% | |
| TGAAATAAGTCAATCCAAAC+AGG | - | chr6.3:84001613-84001632 | MS.gene75083:intron | 30.0% | |
| TGCTCAGTAATACCATTTAT+TGG | - | chr6.3:84003565-84003584 | MS.gene75083:intron | 30.0% | |
| TTGGGGTAAGATTTATGAAA+TGG | + | chr6.3:84001665-84001684 | None:intergenic | 30.0% | |
| TTTCTATATGGACATCAACT+GGG | - | chr6.3:84003703-84003722 | MS.gene75083:intron | 30.0% | |
| ! | AAAGCCTCTTGATATTTTCA+AGG | - | chr6.3:84002995-84003014 | MS.gene75083:intron | 30.0% |
| ! | AGTTGATGTCCATATAGAAA+TGG | + | chr6.3:84003703-84003722 | None:intergenic | 30.0% |
| ! | ATTTAGTTCGACTTCTAAAG+GGG | - | chr6.3:84000932-84000951 | MS.gene75083:intron | 30.0% |
| ! | GGATCATATTTTCATTATGC+AGG | - | chr6.3:84003750-84003769 | MS.gene75083:CDS | 30.0% |
| ! | TAAGCAAGTGACAATTTTGT+AGG | + | chr6.3:84003157-84003176 | None:intergenic | 30.0% |
| ! | TCATATTTTCATTATGCAGG+AGG | - | chr6.3:84003753-84003772 | MS.gene75083:CDS | 30.0% |
| !! | AAATATCAAGAGGCTTTGTT+AGG | + | chr6.3:84002992-84003011 | None:intergenic | 30.0% |
| !! | GGTAGTTAGATTTTAGAAAG+AGG | + | chr6.3:84003862-84003881 | None:intergenic | 30.0% |
| !! | TATTGGTCTTGTTCATCTTA+TGG | - | chr6.3:84003610-84003629 | MS.gene75083:intron | 30.0% |
| AAGAAGTGATTCTTGAAGCT+AGG | - | chr6.3:84001028-84001047 | MS.gene75083:intron | 35.0% | |
| AATCTTGTCCGCTATCATTT+CGG | - | chr6.3:84003066-84003085 | MS.gene75083:CDS | 35.0% | |
| ACAAGATTGTCACCTCATTA+TGG | + | chr6.3:84003054-84003073 | None:intergenic | 35.0% | |
| ACACCTTTGATAAGATGTGT+AGG | - | chr6.3:84000886-84000905 | MS.gene75083:intron | 35.0% | |
| AGAAGAATTGAAGAGAAACC+CGG | - | chr6.3:84002039-84002058 | MS.gene75083:CDS | 35.0% | |
| ATAGAAATTGTTGCTGCTGT+AGG | - | chr6.3:84002421-84002440 | MS.gene75083:intron | 35.0% | |
| ATATCCAAAATGCTTACTCC+AGG | + | chr6.3:84001858-84001877 | None:intergenic | 35.0% | |
| ATGAATAGGATACTCAAACC+AGG | - | chr6.3:84003020-84003039 | MS.gene75083:CDS | 35.0% | |
| CAATATAACACAGTGAAACG+CGG | + | chr6.3:84003439-84003458 | None:intergenic | 35.0% | |
| CTACACTTCAAAATCAATCC+TGG | + | chr6.3:84000958-84000977 | None:intergenic | 35.0% | |
| CTAGAGTACACAATGTACAT+GGG | + | chr6.3:84004373-84004392 | None:intergenic | 35.0% | |
| CTTAATGTTTCCTAATCTGC+TGG | - | chr6.3:84002380-84002399 | MS.gene75083:intron | 35.0% | |
| GAACTTACTCATCATAACGT+TGG | + | chr6.3:84001354-84001373 | None:intergenic | 35.0% | |
| GAAGTCAGAGTTAGTTGAAT+AGG | + | chr6.3:84003637-84003656 | None:intergenic | 35.0% | |
| GCTGATCATGTTATGATTGT+TGG | - | chr6.3:84003729-84003748 | MS.gene75083:CDS | 35.0% | |
| GTGCAATTTCACATGGAAAA+GGG | - | chr6.3:84003402-84003421 | MS.gene75083:intron | 35.0% | |
| TATTAACATACTGAGGCCAA+TGG | - | chr6.3:84004133-84004152 | MS.gene75083:intron | 35.0% | |
| TATTCTTGCAGAAGCAATGA+AGG | + | chr6.3:84000690-84000709 | None:intergenic | 35.0% | |
| TGTGCAATTTCACATGGAAA+AGG | - | chr6.3:84003401-84003420 | MS.gene75083:intron | 35.0% | |
| TTCTATATGGACATCAACTG+GGG | - | chr6.3:84003704-84003723 | MS.gene75083:intron | 35.0% | |
| TTTCCATGTGAAATTGCACA+TGG | + | chr6.3:84003401-84003420 | None:intergenic | 35.0% | |
| TTTCGATGTCATCACTAATG+TGG | - | chr6.3:84002508-84002527 | MS.gene75083:intron | 35.0% | |
| TTTGGATATGTGTAGCAGTT+GGG | - | chr6.3:84001869-84001888 | MS.gene75083:intron | 35.0% | |
| ! | AAGCTAGGATTTGTAGCTTT+TGG | - | chr6.3:84001043-84001062 | MS.gene75083:intron | 35.0% |
| ! | ACAAAAAGGTATAGTGGGAT+GGG | + | chr6.3:84001276-84001295 | None:intergenic | 35.0% |
| ! | GCGTTGACAAGAATTGATTT+AGG | + | chr6.3:84001183-84001202 | None:intergenic | 35.0% |
| ! | TACAAAAAGGTATAGTGGGA+TGG | + | chr6.3:84001277-84001296 | None:intergenic | 35.0% |
| ! | TTTCCGATTTTGTTAGGACA+AGG | - | chr6.3:84003811-84003830 | MS.gene75083:intron | 35.0% |
| ! | TTTTGGATATGTGTAGCAGT+TGG | - | chr6.3:84001868-84001887 | MS.gene75083:intron | 35.0% |
| !! | GGTTGTAGCCATTTTGAATT+TGG | - | chr6.3:84002225-84002244 | MS.gene75083:intron | 35.0% |
| !! | TAACACAGACTACTGATTCT+AGG | + | chr6.3:84003259-84003278 | None:intergenic | 35.0% |
| !!! | AGCGTTGCTTCTTTTTTTGT+AGG | - | chr6.3:84004312-84004331 | MS.gene75083:intron | 35.0% |
| !!! | AGTATCGGTTTTGACTTACA+TGG | - | chr6.3:84002789-84002808 | MS.gene75083:intron | 35.0% |
| AACTCGTTCTTGCTTGTATC+CGG | + | chr6.3:84001999-84002018 | None:intergenic | 40.0% | |
| AAGTGTCCAGAAAAGTTCTG+AGG | + | chr6.3:84003222-84003241 | None:intergenic | 40.0% | |
| AATAGGATACTCAAACCAGG+TGG | - | chr6.3:84003023-84003042 | MS.gene75083:CDS | 40.0% | |
| AATTGGATTGCAGAGTTCAC+TGG | + | chr6.3:84003333-84003352 | None:intergenic | 40.0% | |
| ACACCATGTGCAATTTCACA+TGG | - | chr6.3:84003395-84003414 | MS.gene75083:intron | 40.0% | |
| AGACATACCTGATCAACAGA+GGG | + | chr6.3:84000722-84000741 | None:intergenic | 40.0% | |
| AGTATGCAACAAAGGGAAAG+AGG | + | chr6.3:84003920-84003939 | None:intergenic | 40.0% | |
| ATAACTGAGGGAATTACCTG+AGG | + | chr6.3:84003789-84003808 | None:intergenic | 40.0% | |
| ATTGCTAGGTGGGAAAACTT+TGG | + | chr6.3:84001832-84001851 | None:intergenic | 40.0% | |
| CAAGAACGAGTTGTAGGATT+AGG | - | chr6.3:84002007-84002026 | MS.gene75083:intron | 40.0% | |
| CACTCTTTCACAAGAAACTC+AGG | - | chr6.3:84002731-84002750 | MS.gene75083:intron | 40.0% | |
| CCATGTACATTGTGTACTCT+AGG | - | chr6.3:84004371-84004390 | MS.gene75083:CDS | 40.0% | |
| CCTAGAGTACACAATGTACA+TGG | + | chr6.3:84004374-84004393 | None:intergenic | 40.0% | |
| GCACCTACACATCTTATCAA+AGG | + | chr6.3:84000892-84000911 | None:intergenic | 40.0% | |
| GCAGAATCTGATGACCTAAA+GGG | + | chr6.3:84001738-84001757 | None:intergenic | 40.0% | |
| GCTTCAAGAATCACTTCTTG+AGG | + | chr6.3:84001027-84001046 | None:intergenic | 40.0% | |
| GTGGATATATCTCCAAATCC+TGG | - | chr6.3:84004337-84004356 | MS.gene75083:intron | 40.0% | |
| TACAAGCAAGAACGAGTTGT+AGG | - | chr6.3:84002001-84002020 | MS.gene75083:intron | 40.0% | |
| TAGACATACCTGATCAACAG+AGG | + | chr6.3:84000723-84000742 | None:intergenic | 40.0% | |
| TGCAGAATCTGATGACCTAA+AGG | + | chr6.3:84001739-84001758 | None:intergenic | 40.0% | |
| TGGAAATCCTCCTCCTTAAA+GGG | + | chr6.3:84001334-84001353 | None:intergenic | 40.0% | |
| TTGAAAACTCGATGTCTTGC+AGG | - | chr6.3:84002953-84002972 | MS.gene75083:intron | 40.0% | |
| TTGGAAATCCTCCTCCTTAA+AGG | + | chr6.3:84001335-84001354 | None:intergenic | 40.0% | |
| ! | ATCCATCCTCAGAACTTTTC+TGG | - | chr6.3:84003213-84003232 | MS.gene75083:CDS | 40.0% |
| ! | GAGCCTTGTCCTAACAAAAT+CGG | + | chr6.3:84003817-84003836 | None:intergenic | 40.0% |
| ! | TACTCCTGGAGTAAGCATTT+TGG | - | chr6.3:84001851-84001870 | MS.gene75083:intron | 40.0% |
| !! | TGTTGATAACTGCTCATGGA+GGG | - | chr6.3:84003999-84004018 | MS.gene75083:intron | 40.0% |
| !!! | GCTTCTTTTTTTGTAGGCTG+TGG | - | chr6.3:84004318-84004337 | MS.gene75083:intron | 40.0% |
| AACCCTCTTTCTGTGCTATG+TGG | - | chr6.3:84002068-84002087 | MS.gene75083:CDS | 45.0% | |
| AATTACATGCGTAGTCGGTG+TGG | - | chr6.3:84000855-84000874 | MS.gene75083:intron | 45.0% | |
| ACATACTGAGGCCAATGGTA+TGG | - | chr6.3:84004138-84004157 | MS.gene75083:intron | 45.0% | |
| ACCCAAGCTCGATTACTCTT+TGG | - | chr6.3:84003511-84003530 | MS.gene75083:intron | 45.0% | |
| ACTCGTTCTTGCTTGTATCC+GGG | + | chr6.3:84001998-84002017 | None:intergenic | 45.0% | |
| AGAAAGAGGGTTGTCTTACC+GGG | + | chr6.3:84002060-84002079 | None:intergenic | 45.0% | |
| CAGAAAGAGGGTTGTCTTAC+CGG | + | chr6.3:84002061-84002080 | None:intergenic | 45.0% | |
| CCATGTTTCTCCAGCAGATT+AGG | + | chr6.3:84002393-84002412 | None:intergenic | 45.0% | |
| CCTAATCTGCTGGAGAAACA+TGG | - | chr6.3:84002390-84002409 | MS.gene75083:intron | 45.0% | |
| CTTGTACAGTATACTCCGTG+AGG | + | chr6.3:84002448-84002467 | None:intergenic | 45.0% | |
| GATACTCAAACCAGGTGGAT+TGG | - | chr6.3:84003028-84003047 | MS.gene75083:CDS | 45.0% | |
| GCCAAAGAGTAATCGAGCTT+GGG | + | chr6.3:84003515-84003534 | None:intergenic | 45.0% | |
| GGAAATCCTCCTCCTTAAAG+GGG | + | chr6.3:84001333-84001352 | None:intergenic | 45.0% | |
| GTGCAAGTGATGCATGCTAT+TGG | - | chr6.3:84002575-84002594 | MS.gene75083:CDS | 45.0% | |
| TAGTCAGAGCAGCAATTGCA+GGG | + | chr6.3:84001800-84001819 | None:intergenic | 45.0% | |
| TCCTTAAAGGGGAATTGCTC+TGG | + | chr6.3:84001322-84001341 | None:intergenic | 45.0% | |
| TCGATGTGTGTTACGAATCG+AGG | + | chr6.3:84001774-84001793 | None:intergenic | 45.0% | |
| TGCCAAAGAGTAATCGAGCT+TGG | + | chr6.3:84003516-84003535 | None:intergenic | 45.0% | |
| TGCCACATAGCACAGAAAGA+GGG | + | chr6.3:84002073-84002092 | None:intergenic | 45.0% | |
| TGTGGCAATGTTGTCAATCG+CGG | - | chr6.3:84002086-84002105 | MS.gene75083:intron | 45.0% | |
| TTAGTCAGAGCAGCAATTGC+AGG | + | chr6.3:84001801-84001820 | None:intergenic | 45.0% | |
| TTGCCACATAGCACAGAAAG+AGG | + | chr6.3:84002074-84002093 | None:intergenic | 45.0% | |
| ! | AGAGCAATTCCCCTTTAAGG+AGG | - | chr6.3:84001321-84001340 | MS.gene75083:CDS | 45.0% |
| ! | CATTGTGTACTCTAGGAAGC+TGG | - | chr6.3:84004378-84004397 | MS.gene75083:CDS | 45.0% |
| ! | GTGATAGTGTACCAATGCTG+AGG | - | chr6.3:84004287-84004306 | MS.gene75083:intron | 45.0% |
| !! | CGTGTGTTGATAACTGCTCA+TGG | - | chr6.3:84003995-84004014 | MS.gene75083:intron | 45.0% |
| !! | CTTACTCCAGGAGTATTGCT+AGG | + | chr6.3:84001846-84001865 | None:intergenic | 45.0% |
| !! | GTCCAGAAAAGTTCTGAGGA+TGG | + | chr6.3:84003218-84003237 | None:intergenic | 45.0% |
| !! | GTGTTGATAACTGCTCATGG+AGG | - | chr6.3:84003998-84004017 | MS.gene75083:intron | 45.0% |
| !!! | AGATTTTTTTTTTTTTTTTT+TGG | + | chr6.3:84003892-84003911 | None:intergenic | 5.0% |
| !!! | GATTTTTTTTTTTTTTTTTT+GGG | + | chr6.3:84003891-84003910 | None:intergenic | 5.0% |
| !!! | TTTTAATTAAATTTAAGTAT+TGG | + | chr6.3:84002325-84002344 | None:intergenic | 5.0% |
| ACTGAGGGAATTACCTGAGG+AGG | + | chr6.3:84003786-84003805 | None:intergenic | 50.0% | |
| AGGAGGATTTGAACCTCCTC+AGG | - | chr6.3:84003770-84003789 | MS.gene75083:intron | 50.0% | |
| ATCTCCAAATCCTGGACGCT+CGG | - | chr6.3:84004345-84004364 | MS.gene75083:CDS | 50.0% | |
| CTCATTATGGCCAATCCACC+TGG | + | chr6.3:84003041-84003060 | None:intergenic | 50.0% | |
| GCCAGAGCAATTCCCCTTTA+AGG | - | chr6.3:84001318-84001337 | MS.gene75083:CDS | 50.0% | |
| GCTTCTGCAAGAATAACCGC+TGG | - | chr6.3:84000695-84000714 | MS.gene75083:CDS | 50.0% | |
| GCTTGTATCCGGGTGGAAAA+TGG | + | chr6.3:84001988-84002007 | None:intergenic | 50.0% | |
| TTCCCACCTAGCAATACTCC+TGG | - | chr6.3:84001837-84001856 | MS.gene75083:intron | 50.0% | |
| ! | GCAATTCCCCTTTAAGGAGG+AGG | - | chr6.3:84001324-84001343 | MS.gene75083:CDS | 50.0% |
| ! | GGTATAGTGGGATGGGACAA+AGG | + | chr6.3:84001269-84001288 | None:intergenic | 50.0% |
| !! | ACTCCAGGAGTATTGCTAGG+TGG | + | chr6.3:84001843-84001862 | None:intergenic | 50.0% |
| !! | CAGGTGGATTGGCCATAATG+AGG | - | chr6.3:84003039-84003058 | MS.gene75083:CDS | 50.0% |
| !! | CTCCAGGAGTATTGCTAGGT+GGG | + | chr6.3:84001842-84001861 | None:intergenic | 50.0% |
| !! | TAGGTCAGCCATTTTCCACC+CGG | - | chr6.3:84001977-84001996 | MS.gene75083:intron | 50.0% |
| AGCAACGCTGACCTCAGCAT+TGG | + | chr6.3:84004301-84004320 | None:intergenic | 55.0% | |
| ATGCGTAGTCGGTGTGGTGT+CGG | - | chr6.3:84000861-84000880 | MS.gene75083:intron | 55.0% | |
| CGTTCTTGCTTGTATCCGGG+TGG | + | chr6.3:84001995-84002014 | None:intergenic | 55.0% | |
| CTGATCAACAGAGGGACCAG+CGG | + | chr6.3:84000714-84000733 | None:intergenic | 55.0% | |
| GTTGCTGCTGTAGGTCCTCA+CGG | - | chr6.3:84002430-84002449 | MS.gene75083:intron | 55.0% | |
| ! | GTTCGACTTCTAAAGGGGCC+AGG | - | chr6.3:84000937-84000956 | MS.gene75083:intron | 55.0% |
| CGCTGGTCCCTCTGTTGATC+AGG | - | chr6.3:84000712-84000731 | MS.gene75083:CDS | 60.0% | |
| GGATCCGAGCGTCCAGGATT+TGG | + | chr6.3:84004352-84004371 | None:intergenic | 60.0% | |
| TACATGGGATCCGAGCGTCC+AGG | + | chr6.3:84004358-84004377 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 84000665 | 84004411 | 84000665 | ID=MS.gene75083 |
| chr6.3 | mRNA | 84000665 | 84004411 | 84000665 | ID=MS.gene75083.t1;Parent=MS.gene75083 |
| chr6.3 | exon | 84004343 | 84004411 | 84004343 | ID=MS.gene75083.t1.exon1;Parent=MS.gene75083.t1 |
| chr6.3 | CDS | 84004343 | 84004411 | 84004343 | ID=cds.MS.gene75083.t1;Parent=MS.gene75083.t1 |
| chr6.3 | exon | 84003711 | 84003778 | 84003711 | ID=MS.gene75083.t1.exon2;Parent=MS.gene75083.t1 |
| chr6.3 | CDS | 84003711 | 84003778 | 84003711 | ID=cds.MS.gene75083.t1;Parent=MS.gene75083.t1 |
| chr6.3 | exon | 84003186 | 84003333 | 84003186 | ID=MS.gene75083.t1.exon3;Parent=MS.gene75083.t1 |
| chr6.3 | CDS | 84003186 | 84003333 | 84003186 | ID=cds.MS.gene75083.t1;Parent=MS.gene75083.t1 |
| chr6.3 | exon | 84003016 | 84003096 | 84003016 | ID=MS.gene75083.t1.exon4;Parent=MS.gene75083.t1 |
| chr6.3 | CDS | 84003016 | 84003096 | 84003016 | ID=cds.MS.gene75083.t1;Parent=MS.gene75083.t1 |
| chr6.3 | exon | 84002547 | 84002633 | 84002547 | ID=MS.gene75083.t1.exon5;Parent=MS.gene75083.t1 |
| chr6.3 | CDS | 84002547 | 84002633 | 84002547 | ID=cds.MS.gene75083.t1;Parent=MS.gene75083.t1 |
| chr6.3 | exon | 84002016 | 84002101 | 84002016 | ID=MS.gene75083.t1.exon6;Parent=MS.gene75083.t1 |
| chr6.3 | CDS | 84002016 | 84002101 | 84002016 | ID=cds.MS.gene75083.t1;Parent=MS.gene75083.t1 |
| chr6.3 | exon | 84001285 | 84001405 | 84001285 | ID=MS.gene75083.t1.exon7;Parent=MS.gene75083.t1 |
| chr6.3 | CDS | 84001285 | 84001405 | 84001285 | ID=cds.MS.gene75083.t1;Parent=MS.gene75083.t1 |
| chr6.3 | exon | 84000665 | 84000742 | 84000665 | ID=MS.gene75083.t1.exon8;Parent=MS.gene75083.t1 |
| chr6.3 | CDS | 84000665 | 84000742 | 84000665 | ID=cds.MS.gene75083.t1;Parent=MS.gene75083.t1 |
| Gene Sequence |
| Protein sequence |
