Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76300.t1 | XP_013470184.1 | 99.4 | 496 | 3 | 0 | 1 | 496 | 1 | 496 | 2.20E-286 | 994.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76300.t1 | Q9XF43 | 85.2 | 492 | 73 | 0 | 5 | 496 | 6 | 497 | 3.6e-253 | 875.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76300.t1 | G7ZZE4 | 99.4 | 496 | 3 | 0 | 1 | 496 | 1 | 496 | 1.6e-286 | 994.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene76300 | 0.802072 | 6.67E-49 | -1.69E-46 |
| MS.gene049356 | MS.gene76300 | 0.877379 | 6.59E-69 | -1.69E-46 |
| MS.gene049369 | MS.gene76300 | 0.861648 | 8.85E-64 | -1.69E-46 |
| MS.gene049396 | MS.gene76300 | 0.819331 | 1.23E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene76300 | 0.812599 | 3.91E-51 | -1.69E-46 |
| MS.gene049805 | MS.gene76300 | 0.803163 | 3.97E-49 | -1.69E-46 |
| MS.gene049907 | MS.gene76300 | 0.818074 | 2.37E-52 | -1.69E-46 |
| MS.gene050122 | MS.gene76300 | 0.827686 | 1.36E-54 | -1.69E-46 |
| MS.gene050301 | MS.gene76300 | 0.833518 | 5.09E-56 | -1.69E-46 |
| MS.gene050400 | MS.gene76300 | 0.814036 | 1.89E-51 | -1.69E-46 |
| MS.gene050432 | MS.gene76300 | 0.800879 | 1.17E-48 | -1.69E-46 |
| MS.gene050520 | MS.gene76300 | 0.848208 | 7.09E-60 | -1.69E-46 |
| MS.gene050593 | MS.gene76300 | 0.843159 | 1.66E-58 | -1.69E-46 |
| MS.gene050670 | MS.gene76300 | 0.891368 | 4.24E-74 | -1.69E-46 |
| MS.gene050686 | MS.gene76300 | 0.812409 | 4.30E-51 | -1.69E-46 |
| MS.gene050772 | MS.gene76300 | 0.819374 | 1.20E-52 | -1.69E-46 |
| MS.gene050971 | MS.gene76300 | 0.806817 | 6.84E-50 | -1.69E-46 |
| MS.gene05101 | MS.gene76300 | 0.802598 | 5.20E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene76300 | 0.888487 | 5.65E-73 | -1.69E-46 |
| MS.gene051255 | MS.gene76300 | 0.845894 | 3.06E-59 | -1.69E-46 |
| MS.gene051360 | MS.gene76300 | 0.846991 | 1.53E-59 | -1.69E-46 |
| MS.gene051387 | MS.gene76300 | 0.856709 | 2.68E-62 | -1.69E-46 |
| MS.gene051525 | MS.gene76300 | 0.866106 | 3.63E-65 | -1.69E-46 |
| MS.gene051582 | MS.gene76300 | 0.818973 | 1.48E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene76300 | 0.809746 | 1.62E-50 | -1.69E-46 |
| MS.gene051692 | MS.gene76300 | 0.806745 | 7.09E-50 | -1.69E-46 |
| MS.gene051941 | MS.gene76300 | 0.815737 | 7.93E-52 | -1.69E-46 |
| MS.gene052011 | MS.gene76300 | -0.820175 | 7.88E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene76300 | 0.868138 | 8.16E-66 | -1.69E-46 |
| MS.gene052253 | MS.gene76300 | 0.845342 | 4.31E-59 | -1.69E-46 |
| MS.gene052271 | MS.gene76300 | 0.806674 | 7.33E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene76300 | 0.841273 | 5.25E-58 | -1.69E-46 |
| MS.gene052322 | MS.gene76300 | 0.810817 | 9.54E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene76300 | 0.871425 | 6.90E-67 | -1.69E-46 |
| MS.gene052346 | MS.gene76300 | 0.837536 | 4.91E-57 | -1.69E-46 |
| MS.gene052414 | MS.gene76300 | 0.822321 | 2.52E-53 | -1.69E-46 |
| MS.gene052421 | MS.gene76300 | 0.867499 | 1.31E-65 | -1.69E-46 |
| MS.gene052481 | MS.gene76300 | 0.807812 | 4.21E-50 | -1.69E-46 |
| MS.gene052485 | MS.gene76300 | 0.873129 | 1.87E-67 | -1.69E-46 |
| MS.gene052982 | MS.gene76300 | 0.813415 | 2.59E-51 | -1.69E-46 |
| MS.gene052999 | MS.gene76300 | 0.847028 | 1.50E-59 | -1.69E-46 |
| MS.gene053169 | MS.gene76300 | 0.869418 | 3.14E-66 | -1.69E-46 |
| MS.gene05316 | MS.gene76300 | 0.813004 | 3.19E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene76300 | 0.82991 | 3.95E-55 | -1.69E-46 |
| MS.gene05335 | MS.gene76300 | 0.840651 | 7.65E-58 | -1.69E-46 |
| MS.gene053449 | MS.gene76300 | 0.846259 | 2.43E-59 | -1.69E-46 |
| MS.gene053574 | MS.gene76300 | 0.80694 | 6.44E-50 | -1.69E-46 |
| MS.gene053758 | MS.gene76300 | 0.833261 | 5.90E-56 | -1.69E-46 |
| MS.gene053813 | MS.gene76300 | 0.891142 | 5.20E-74 | -1.69E-46 |
| MS.gene053912 | MS.gene76300 | 0.827118 | 1.87E-54 | -1.69E-46 |
| MS.gene053928 | MS.gene76300 | 0.831722 | 1.42E-55 | -1.69E-46 |
| MS.gene054010 | MS.gene76300 | 0.845912 | 3.02E-59 | -1.69E-46 |
| MS.gene054011 | MS.gene76300 | 0.827042 | 1.95E-54 | -1.69E-46 |
| MS.gene054012 | MS.gene76300 | 0.830589 | 2.70E-55 | -1.69E-46 |
| MS.gene054013 | MS.gene76300 | 0.831913 | 1.27E-55 | -1.69E-46 |
| MS.gene054123 | MS.gene76300 | 0.806734 | 7.12E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene76300 | 0.800657 | 1.30E-48 | -1.69E-46 |
| MS.gene054349 | MS.gene76300 | 0.805382 | 1.37E-49 | -1.69E-46 |
| MS.gene054556 | MS.gene76300 | 0.863934 | 1.75E-64 | -1.69E-46 |
| MS.gene05505 | MS.gene76300 | 0.844885 | 5.73E-59 | -1.69E-46 |
| MS.gene055116 | MS.gene76300 | 0.891059 | 5.61E-74 | -1.69E-46 |
| MS.gene055277 | MS.gene76300 | 0.809121 | 2.21E-50 | -1.69E-46 |
| MS.gene055369 | MS.gene76300 | 0.828211 | 1.02E-54 | -1.69E-46 |
| MS.gene055539 | MS.gene76300 | 0.803834 | 2.89E-49 | -1.69E-46 |
| MS.gene05553 | MS.gene76300 | 0.807004 | 6.25E-50 | -1.69E-46 |
| MS.gene055604 | MS.gene76300 | 0.820541 | 6.50E-53 | -1.69E-46 |
| MS.gene055666 | MS.gene76300 | 0.826537 | 2.57E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene76300 | 0.82556 | 4.39E-54 | -1.69E-46 |
| MS.gene055741 | MS.gene76300 | 0.852216 | 5.34E-61 | -1.69E-46 |
| MS.gene055744 | MS.gene76300 | 0.855814 | 4.90E-62 | -1.69E-46 |
| MS.gene055802 | MS.gene76300 | 0.837184 | 6.04E-57 | -1.69E-46 |
| MS.gene055909 | MS.gene76300 | 0.868833 | 4.87E-66 | -1.69E-46 |
| MS.gene055911 | MS.gene76300 | 0.872908 | 2.22E-67 | -1.69E-46 |
| MS.gene05592 | MS.gene76300 | 0.820742 | 5.84E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene76300 | 0.871729 | 5.47E-67 | -1.69E-46 |
| MS.gene056407 | MS.gene76300 | 0.859525 | 3.89E-63 | -1.69E-46 |
| MS.gene056410 | MS.gene76300 | 0.830424 | 2.96E-55 | -1.69E-46 |
| MS.gene056422 | MS.gene76300 | 0.848293 | 6.72E-60 | -1.69E-46 |
| MS.gene056511 | MS.gene76300 | 0.874681 | 5.58E-68 | -1.69E-46 |
| MS.gene056514 | MS.gene76300 | 0.812984 | 3.22E-51 | -1.69E-46 |
| MS.gene056659 | MS.gene76300 | 0.81106 | 8.46E-51 | -1.69E-46 |
| MS.gene05666 | MS.gene76300 | 0.800116 | 1.68E-48 | -1.69E-46 |
| MS.gene056902 | MS.gene76300 | 0.835812 | 1.35E-56 | -1.69E-46 |
| MS.gene057019 | MS.gene76300 | 0.854103 | 1.54E-61 | -1.69E-46 |
| MS.gene05702 | MS.gene76300 | 0.812095 | 5.04E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene76300 | 0.818606 | 1.80E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene76300 | 0.844903 | 5.67E-59 | -1.69E-46 |
| MS.gene057285 | MS.gene76300 | 0.803947 | 2.73E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene76300 | 0.836551 | 8.76E-57 | -1.69E-46 |
| MS.gene057396 | MS.gene76300 | 0.823036 | 1.72E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene76300 | 0.819908 | 9.07E-53 | -1.69E-46 |
| MS.gene057448 | MS.gene76300 | 0.830047 | 3.66E-55 | -1.69E-46 |
| MS.gene057449 | MS.gene76300 | 0.826723 | 2.32E-54 | -1.69E-46 |
| MS.gene057450 | MS.gene76300 | 0.832629 | 8.48E-56 | -1.69E-46 |
| MS.gene057537 | MS.gene76300 | 0.803003 | 4.29E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene76300 | 0.838299 | 3.12E-57 | -1.69E-46 |
| MS.gene057749 | MS.gene76300 | 0.869065 | 4.09E-66 | -1.69E-46 |
| MS.gene057823 | MS.gene76300 | 0.868817 | 4.93E-66 | -1.69E-46 |
| MS.gene057825 | MS.gene76300 | 0.832033 | 1.19E-55 | -1.69E-46 |
| MS.gene058002 | MS.gene76300 | 0.813109 | 3.02E-51 | -1.69E-46 |
| MS.gene058007 | MS.gene76300 | 0.859432 | 4.15E-63 | -1.69E-46 |
| MS.gene058019 | MS.gene76300 | 0.814607 | 1.41E-51 | -1.69E-46 |
| MS.gene05811 | MS.gene76300 | 0.822173 | 2.73E-53 | -1.69E-46 |
| MS.gene058120 | MS.gene76300 | 0.806637 | 7.47E-50 | -1.69E-46 |
| MS.gene058293 | MS.gene76300 | 0.822949 | 1.80E-53 | -1.69E-46 |
| MS.gene058365 | MS.gene76300 | 0.805653 | 1.20E-49 | -1.69E-46 |
| MS.gene05842 | MS.gene76300 | 0.81465 | 1.38E-51 | -1.69E-46 |
| MS.gene058444 | MS.gene76300 | 0.824461 | 7.97E-54 | -1.69E-46 |
| MS.gene058459 | MS.gene76300 | 0.821744 | 3.43E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene76300 | 0.824783 | 6.70E-54 | -1.69E-46 |
| MS.gene058700 | MS.gene76300 | 0.871394 | 7.06E-67 | -1.69E-46 |
| MS.gene05886 | MS.gene76300 | 0.823895 | 1.08E-53 | -1.69E-46 |
| MS.gene058928 | MS.gene76300 | 0.830392 | 3.01E-55 | -1.69E-46 |
| MS.gene058948 | MS.gene76300 | 0.835949 | 1.25E-56 | -1.69E-46 |
| MS.gene058949 | MS.gene76300 | 0.827255 | 1.73E-54 | -1.69E-46 |
| MS.gene058995 | MS.gene76300 | 0.851035 | 1.15E-60 | -1.69E-46 |
| MS.gene059011 | MS.gene76300 | 0.802138 | 6.47E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene76300 | 0.852657 | 4.00E-61 | -1.69E-46 |
| MS.gene059080 | MS.gene76300 | 0.805205 | 1.49E-49 | -1.69E-46 |
| MS.gene059082 | MS.gene76300 | 0.830312 | 3.15E-55 | -1.69E-46 |
| MS.gene059129 | MS.gene76300 | 0.843436 | 1.40E-58 | -1.69E-46 |
| MS.gene059141 | MS.gene76300 | 0.816027 | 6.83E-52 | -1.69E-46 |
| MS.gene059294 | MS.gene76300 | 0.825412 | 4.76E-54 | -1.69E-46 |
| MS.gene059366 | MS.gene76300 | 0.830469 | 2.89E-55 | -1.69E-46 |
| MS.gene059368 | MS.gene76300 | 0.810845 | 9.41E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene76300 | 0.862084 | 6.51E-64 | -1.69E-46 |
| MS.gene059455 | MS.gene76300 | 0.824686 | 7.06E-54 | -1.69E-46 |
| MS.gene059462 | MS.gene76300 | 0.823364 | 1.44E-53 | -1.69E-46 |
| MS.gene059674 | MS.gene76300 | 0.855816 | 4.89E-62 | -1.69E-46 |
| MS.gene059676 | MS.gene76300 | 0.850614 | 1.51E-60 | -1.69E-46 |
| MS.gene059680 | MS.gene76300 | 0.805202 | 1.50E-49 | -1.69E-46 |
| MS.gene059688 | MS.gene76300 | 0.887323 | 1.58E-72 | -1.69E-46 |
| MS.gene059692 | MS.gene76300 | 0.875351 | 3.30E-68 | -1.69E-46 |
| MS.gene059695 | MS.gene76300 | 0.883143 | 5.76E-71 | -1.69E-46 |
| MS.gene059711 | MS.gene76300 | 0.86921 | 3.67E-66 | -1.69E-46 |
| MS.gene059807 | MS.gene76300 | 0.862508 | 4.82E-64 | -1.69E-46 |
| MS.gene05984 | MS.gene76300 | 0.808614 | 2.84E-50 | -1.69E-46 |
| MS.gene059876 | MS.gene76300 | 0.819152 | 1.35E-52 | -1.69E-46 |
| MS.gene059974 | MS.gene76300 | 0.865543 | 5.47E-65 | -1.69E-46 |
| MS.gene060372 | MS.gene76300 | 0.8731 | 1.91E-67 | -1.69E-46 |
| MS.gene060401 | MS.gene76300 | 0.84427 | 8.39E-59 | -1.69E-46 |
| MS.gene060403 | MS.gene76300 | 0.849518 | 3.07E-60 | -1.69E-46 |
| MS.gene060804 | MS.gene76300 | 0.81622 | 6.19E-52 | -1.69E-46 |
| MS.gene060835 | MS.gene76300 | 0.831009 | 2.13E-55 | -1.69E-46 |
| MS.gene060837 | MS.gene76300 | 0.89188 | 2.65E-74 | -1.69E-46 |
| MS.gene060986 | MS.gene76300 | 0.827152 | 1.83E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene76300 | 0.82656 | 2.54E-54 | -1.69E-46 |
| MS.gene061051 | MS.gene76300 | -0.819762 | 9.79E-53 | -1.69E-46 |
| MS.gene061154 | MS.gene76300 | 0.871451 | 6.76E-67 | -1.69E-46 |
| MS.gene061159 | MS.gene76300 | 0.820516 | 6.58E-53 | -1.69E-46 |
| MS.gene061200 | MS.gene76300 | 0.812056 | 5.14E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene76300 | MS.gene52397 | PPI |
| MS.gene76300 | MS.gene004547 | PPI |
| MS.gene00288 | MS.gene76300 | PPI |
| MS.gene68905 | MS.gene76300 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76300.t1 | MTR_1g110930 | 99.395 | 496 | 3 | 0 | 1 | 496 | 1 | 496 | 0.0 | 1022 |
| MS.gene76300.t1 | MTR_5g056510 | 88.710 | 496 | 56 | 0 | 1 | 496 | 1 | 496 | 0.0 | 922 |
| MS.gene76300.t1 | MTR_4g070270 | 66.667 | 486 | 162 | 0 | 5 | 490 | 17 | 502 | 0.0 | 697 |
| MS.gene76300.t1 | MTR_2g054940 | 63.340 | 491 | 179 | 1 | 4 | 493 | 18 | 508 | 0.0 | 654 |
| MS.gene76300.t1 | MTR_1g041085 | 62.880 | 493 | 182 | 1 | 5 | 496 | 26 | 518 | 0.0 | 649 |
| MS.gene76300.t1 | MTR_1g076430 | 61.460 | 493 | 189 | 1 | 5 | 496 | 20 | 512 | 0.0 | 644 |
| MS.gene76300.t1 | MTR_7g081695 | 61.649 | 485 | 173 | 2 | 4 | 487 | 18 | 490 | 0.0 | 615 |
| MS.gene76300.t1 | MTR_4g113280 | 58.656 | 491 | 189 | 3 | 5 | 493 | 8 | 486 | 0.0 | 611 |
| MS.gene76300.t1 | MTR_7g118170 | 58.233 | 498 | 196 | 5 | 5 | 491 | 33 | 529 | 0.0 | 592 |
| MS.gene76300.t1 | MTR_3g105550 | 55.311 | 499 | 210 | 5 | 5 | 490 | 38 | 536 | 0.0 | 577 |
| MS.gene76300.t1 | MTR_2g007020 | 55.366 | 410 | 179 | 3 | 84 | 491 | 45 | 452 | 9.01e-172 | 492 |
| MS.gene76300.t1 | MTR_2g436480 | 52.009 | 423 | 199 | 3 | 71 | 490 | 30 | 451 | 6.35e-162 | 466 |
| MS.gene76300.t1 | MTR_6g074880 | 52.796 | 447 | 205 | 4 | 49 | 492 | 27 | 470 | 2.82e-161 | 466 |
| MS.gene76300.t1 | MTR_4g054415 | 53.756 | 426 | 191 | 4 | 68 | 490 | 3 | 425 | 3.78e-161 | 464 |
| MS.gene76300.t1 | MTR_4g054630 | 53.756 | 426 | 191 | 4 | 68 | 490 | 44 | 466 | 3.81e-161 | 465 |
| MS.gene76300.t1 | MTR_2g013740 | 50.207 | 482 | 227 | 4 | 3 | 481 | 31 | 502 | 3.87e-161 | 466 |
| MS.gene76300.t1 | MTR_7g118160 | 53.041 | 411 | 148 | 3 | 83 | 490 | 51 | 419 | 4.72e-156 | 451 |
| MS.gene76300.t1 | MTR_1g102290 | 51.225 | 408 | 197 | 2 | 83 | 488 | 77 | 484 | 1.48e-153 | 446 |
| MS.gene76300.t1 | MTR_6g032965 | 54.692 | 373 | 168 | 1 | 120 | 491 | 13 | 385 | 1.49e-151 | 438 |
| MS.gene76300.t1 | MTR_3g072940 | 51.456 | 412 | 195 | 5 | 80 | 488 | 74 | 483 | 5.09e-150 | 437 |
| MS.gene76300.t1 | MTR_3g072980 | 51.456 | 412 | 195 | 5 | 80 | 488 | 74 | 483 | 5.14e-150 | 437 |
| MS.gene76300.t1 | MTR_6g051440 | 50.245 | 408 | 200 | 3 | 83 | 488 | 76 | 482 | 1.77e-137 | 405 |
| MS.gene76300.t1 | MTR_1g115560 | 39.394 | 429 | 230 | 7 | 84 | 487 | 28 | 451 | 9.73e-110 | 334 |
| MS.gene76300.t1 | MTR_4g062270 | 38.799 | 433 | 256 | 5 | 61 | 487 | 4 | 433 | 1.30e-108 | 331 |
| MS.gene76300.t1 | MTR_2g096210 | 40.359 | 446 | 246 | 8 | 61 | 489 | 4 | 446 | 4.32e-108 | 330 |
| MS.gene76300.t1 | MTR_4g062190 | 37.613 | 444 | 255 | 6 | 61 | 487 | 4 | 442 | 1.13e-104 | 321 |
| MS.gene76300.t1 | MTR_4g062170 | 38.776 | 441 | 253 | 6 | 61 | 487 | 4 | 441 | 1.47e-104 | 320 |
| MS.gene76300.t1 | MTR_4g054260 | 51.362 | 257 | 104 | 4 | 237 | 490 | 87 | 325 | 1.48e-81 | 256 |
| MS.gene76300.t1 | MTR_4g053905 | 57.500 | 160 | 65 | 2 | 333 | 490 | 1 | 159 | 1.43e-58 | 191 |
| MS.gene76300.t1 | MTR_4g054265 | 37.288 | 118 | 72 | 1 | 68 | 185 | 3 | 118 | 3.63e-18 | 80.9 |
| MS.gene76300.t1 | MTR_7g086260 | 62.903 | 62 | 21 | 1 | 328 | 387 | 22 | 83 | 9.42e-17 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76300.t1 | AT1G68530 | 85.163 | 492 | 73 | 0 | 5 | 496 | 6 | 497 | 0.0 | 903 |
| MS.gene76300.t1 | AT1G25450 | 82.520 | 492 | 86 | 0 | 5 | 496 | 1 | 492 | 0.0 | 880 |
| MS.gene76300.t1 | AT2G16280 | 65.432 | 486 | 168 | 0 | 5 | 490 | 25 | 510 | 0.0 | 691 |
| MS.gene76300.t1 | AT1G19440 | 64.124 | 485 | 174 | 0 | 4 | 488 | 28 | 512 | 0.0 | 690 |
| MS.gene76300.t1 | AT2G26640 | 59.388 | 490 | 198 | 1 | 5 | 493 | 17 | 506 | 0.0 | 621 |
| MS.gene76300.t1 | AT4G34510 | 61.134 | 476 | 179 | 2 | 16 | 490 | 15 | 485 | 0.0 | 619 |
| MS.gene76300.t1 | AT1G68530 | 82.267 | 344 | 61 | 0 | 5 | 348 | 6 | 349 | 0.0 | 610 |
| MS.gene76300.t1 | AT1G04220 | 58.149 | 497 | 198 | 5 | 5 | 492 | 22 | 517 | 0.0 | 598 |
| MS.gene76300.t1 | AT5G43760 | 59.553 | 492 | 190 | 4 | 11 | 494 | 34 | 524 | 0.0 | 589 |
| MS.gene76300.t1 | AT1G01120 | 57.258 | 496 | 203 | 4 | 5 | 492 | 34 | 528 | 0.0 | 585 |
| MS.gene76300.t1 | AT2G26250 | 53.696 | 514 | 204 | 6 | 5 | 488 | 39 | 548 | 0.0 | 565 |
| MS.gene76300.t1 | AT4G34520 | 52.990 | 485 | 217 | 2 | 17 | 490 | 6 | 490 | 0.0 | 541 |
| MS.gene76300.t1 | AT2G15090 | 54.487 | 468 | 202 | 4 | 33 | 490 | 13 | 479 | 0.0 | 540 |
| MS.gene76300.t1 | AT4G34250 | 52.174 | 483 | 225 | 1 | 14 | 490 | 5 | 487 | 0.0 | 540 |
| MS.gene76300.t1 | AT2G46720 | 53.976 | 415 | 188 | 1 | 79 | 490 | 51 | 465 | 3.26e-176 | 503 |
| MS.gene76300.t1 | AT3G10280 | 52.530 | 415 | 187 | 2 | 79 | 490 | 51 | 458 | 3.33e-168 | 483 |
| MS.gene76300.t1 | AT1G71160 | 51.059 | 425 | 206 | 2 | 65 | 488 | 23 | 446 | 2.86e-164 | 473 |
| MS.gene76300.t1 | AT5G49070 | 53.186 | 408 | 187 | 2 | 88 | 492 | 51 | 457 | 1.19e-154 | 448 |
| MS.gene76300.t1 | AT3G52160 | 41.458 | 480 | 233 | 4 | 2 | 480 | 18 | 450 | 8.44e-130 | 385 |
| MS.gene76300.t1 | AT3G52160 | 47.514 | 362 | 158 | 2 | 120 | 480 | 7 | 337 | 5.29e-120 | 355 |
| MS.gene76300.t1 | AT2G28630 | 41.135 | 423 | 227 | 8 | 84 | 487 | 27 | 446 | 3.00e-108 | 330 |
| MS.gene76300.t1 | AT2G28630 | 41.135 | 423 | 227 | 8 | 84 | 487 | 27 | 446 | 3.00e-108 | 330 |
| MS.gene76300.t1 | AT5G04530 | 40.334 | 419 | 235 | 6 | 79 | 487 | 24 | 437 | 9.42e-108 | 328 |
| MS.gene76300.t1 | AT1G07720 | 39.623 | 424 | 233 | 6 | 84 | 487 | 27 | 447 | 1.53e-104 | 321 |
| MS.gene76300.t1 | AT1G07720 | 39.623 | 424 | 233 | 6 | 84 | 487 | 70 | 490 | 2.44e-104 | 322 |
| MS.gene76300.t1 | AT5G49070 | 50.570 | 263 | 130 | 0 | 88 | 350 | 51 | 313 | 3.80e-89 | 276 |
Find 81 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAAAAGTTTCAATCTTTC+TGG | 0.065209 | 1.1:-78313656 | MS.gene76300:CDS |
| GGAATATATGGTTTCCATTT+AGG | 0.109972 | 1.1:+78313182 | None:intergenic |
| ACAACAACAGCGTTTGAATT+TGG | 0.177083 | 1.1:+78313572 | None:intergenic |
| GACTAGAGTTTAACAATTTC+AGG | 0.193877 | 1.1:+78312825 | None:intergenic |
| CCCATTCTGAACAAACAATT+TGG | 0.235185 | 1.1:+78313491 | None:intergenic |
| ATGAGTATGTCTATGTCTTT+TGG | 0.254903 | 1.1:+78313755 | None:intergenic |
| GAATATATGGTTTCCATTTA+GGG | 0.289900 | 1.1:+78313183 | None:intergenic |
| GCTGATTCCATGGTTGGTTT+TGG | 0.301961 | 1.1:+78313845 | None:intergenic |
| TGTTTAAAATCAGGAATATA+TGG | 0.307224 | 1.1:+78313170 | None:intergenic |
| CAAATGAAATCCTCAATCTT+TGG | 0.318875 | 1.1:-78314150 | MS.gene76300:CDS |
| ATTCTTGAACGTTCTGGTCT+TGG | 0.333327 | 1.1:-78313908 | MS.gene76300:CDS |
| ACCAAATTGTTTGTTCAGAA+TGG | 0.334078 | 1.1:-78313492 | MS.gene76300:CDS |
| CCTCTTGCTGATTCCATGGT+TGG | 0.334706 | 1.1:+78313839 | None:intergenic |
| GAAGACAAAGAAGGTAAAGT+TGG | 0.337284 | 1.1:-78313344 | MS.gene76300:CDS |
| TCATTTCCTTGGTAATAGTT+TGG | 0.338601 | 1.1:+78313530 | None:intergenic |
| TAATGTGATTAACAAGATAT+TGG | 0.344044 | 1.1:+78314233 | None:intergenic |
| TCAAAAGCTTGTTTAAAATC+AGG | 0.344766 | 1.1:+78313161 | None:intergenic |
| ATGAGGATTCTTGAACGTTC+TGG | 0.346354 | 1.1:-78313914 | MS.gene76300:CDS |
| CAAAGATTGAGGATTTCATT+TGG | 0.351380 | 1.1:+78314151 | None:intergenic |
| TTAAATGCAATAGTGCTGTT+TGG | 0.358909 | 1.1:-78312923 | MS.gene76300:CDS |
| ACAATTTCAGGAATATGAAC+TGG | 0.365101 | 1.1:+78312837 | None:intergenic |
| CATCAAGGATGACACTTCAT+AGG | 0.375420 | 1.1:-78313055 | MS.gene76300:CDS |
| GCATGGCTCTTTCATTTCCT+TGG | 0.383297 | 1.1:+78313519 | None:intergenic |
| CTAGAGAAATCAGGCAAGAT+TGG | 0.383386 | 1.1:+78314289 | None:intergenic |
| AGTTTCAATCTTTCTGGAAT+GGG | 0.384158 | 1.1:-78313650 | MS.gene76300:CDS |
| TCCATTGAATTAATACGTTT+AGG | 0.384851 | 1.1:-78314175 | MS.gene76300:CDS |
| AAAGATCTTATGGCAATTGC+AGG | 0.402261 | 1.1:-78313308 | MS.gene76300:CDS |
| ACCTAAACGTATTAATTCAA+TGG | 0.403709 | 1.1:+78314174 | None:intergenic |
| GTAGGATGAAGAAAGGAGAC+AGG | 0.407017 | 1.1:-78312974 | MS.gene76300:CDS |
| ACTCTTATTCCAATCATGAT+TGG | 0.409903 | 1.1:-78314202 | MS.gene76300:CDS |
| CCAAATTGTTTGTTCAGAAT+GGG | 0.412558 | 1.1:-78313491 | MS.gene76300:CDS |
| TTCACCTCTTGCTGATTCCA+TGG | 0.414626 | 1.1:+78313835 | None:intergenic |
| TCTGGAATGGGGTGTAGTGC+TGG | 0.419176 | 1.1:-78313638 | MS.gene76300:CDS |
| AACACCTTCTTTGTCTGCTA+TGG | 0.422563 | 1.1:-78313708 | MS.gene76300:CDS |
| AAGTTTCAATCTTTCTGGAA+TGG | 0.430041 | 1.1:-78313651 | MS.gene76300:CDS |
| AAAGGGACACGACATGTAAC+AGG | 0.437710 | 1.1:+78314001 | None:intergenic |
| AGGATGACACTTCATAGGTT+TGG | 0.439246 | 1.1:-78313050 | MS.gene76300:CDS |
| AGGGTATGGCAGATAGCATT+TGG | 0.440079 | 1.1:-78312954 | MS.gene76300:CDS |
| ATGGAAACACCAATCATGAT+TGG | 0.444520 | 1.1:+78314193 | None:intergenic |
| TCTGTCCAAGGTCCATCAAT+AGG | 0.447705 | 1.1:+78312876 | None:intergenic |
| TTAACTGAGCTAGAGAAATC+AGG | 0.455875 | 1.1:+78314280 | None:intergenic |
| TTTGAAGAAGAAGACAAAGA+AGG | 0.458785 | 1.1:-78313353 | MS.gene76300:CDS |
| AGCATTAAGACACCTATTGA+TGG | 0.461657 | 1.1:-78312888 | MS.gene76300:CDS |
| ATACATCTTCATCATCACTA+TGG | 0.462472 | 1.1:-78313025 | MS.gene76300:CDS |
| TGTTCCATGAAAGTAGCAAA+AGG | 0.467222 | 1.1:+78313983 | None:intergenic |
| AAATCAAATATAACAACAAT+GGG | 0.469834 | 1.1:-78313275 | MS.gene76300:CDS |
| AAAAGTAACTGTTCTGAAGC+TGG | 0.486547 | 1.1:+78313239 | None:intergenic |
| TCAAAAGGTAGGATGAAGAA+AGG | 0.488474 | 1.1:-78312981 | MS.gene76300:CDS |
| CATGTTGTTAGAACACATAA+AGG | 0.489283 | 1.1:-78313404 | MS.gene76300:CDS |
| CTTAACTACATTGAATCAAA+AGG | 0.489774 | 1.1:-78312996 | MS.gene76300:CDS |
| GGTGGAATATAATGAATTGA+AGG | 0.501040 | 1.1:+78313866 | None:intergenic |
| AAGCTCAAATATGTCAAACT+TGG | 0.506709 | 1.1:-78314259 | MS.gene76300:CDS |
| TGAAGAAAGGAGACAGGGTA+TGG | 0.518624 | 1.1:-78312968 | MS.gene76300:CDS |
| AGACACCTATTGATGGACCT+TGG | 0.526960 | 1.1:-78312881 | MS.gene76300:CDS |
| TAAATCAAATATAACAACAA+TGG | 0.543034 | 1.1:-78313276 | MS.gene76300:CDS |
| GTTTCAATCTTTCTGGAATG+GGG | 0.553526 | 1.1:-78313649 | MS.gene76300:CDS |
| GAGAAATCAGGCAAGATTGG+AGG | 0.557615 | 1.1:+78314292 | None:intergenic |
| GTTCCATGAAAGTAGCAAAA+GGG | 0.562961 | 1.1:+78313984 | None:intergenic |
| CAATTTCAGGAATATGAACT+GGG | 0.566319 | 1.1:+78312838 | None:intergenic |
| TTAGTGAGTTCCAAAGATTG+AGG | 0.567302 | 1.1:+78314140 | None:intergenic |
| CTGAACATGTGGAAGCATCA+AGG | 0.570082 | 1.1:-78313070 | MS.gene76300:CDS |
| TATTCCACCAAAACCAACCA+TGG | 0.572625 | 1.1:-78313852 | MS.gene76300:CDS |
| TCAATTATCTACTGAACATG+TGG | 0.575418 | 1.1:-78313081 | MS.gene76300:CDS |
| TGGCAGATAGCATTTGGCAG+TGG | 0.575630 | 1.1:-78312948 | MS.gene76300:CDS |
| TAGGATGAAGAAAGGAGACA+GGG | 0.587174 | 1.1:-78312973 | MS.gene76300:CDS |
| AAAGTGTCGAGTTTCAAATG+AGG | 0.587795 | 1.1:-78313931 | MS.gene76300:CDS |
| ATAGCAGACAAAGAAGGTGT+TGG | 0.589581 | 1.1:+78313710 | None:intergenic |
| CGATCAATGCAATCTGTCCA+AGG | 0.590590 | 1.1:+78312864 | None:intergenic |
| ACTACATTGAATCAAAAGGT+AGG | 0.596604 | 1.1:-78312992 | MS.gene76300:CDS |
| CAAACAATTTGGTAAAAGCA+TGG | 0.599779 | 1.1:+78313502 | None:intergenic |
| ATAACACCAAACTATTACCA+AGG | 0.604070 | 1.1:-78313536 | MS.gene76300:CDS |
| ATCACCATAGCAGACAAAGA+AGG | 0.607711 | 1.1:+78313704 | None:intergenic |
| TCTGAAGCTGGTAAAACAAG+AGG | 0.631454 | 1.1:+78313251 | None:intergenic |
| TCAACGAGGTAGATTGTGCG+TGG | 0.640912 | 1.1:+78314043 | None:intergenic |
| GGAATATAATGAATTGAAGG+TGG | 0.644085 | 1.1:+78313869 | None:intergenic |
| AATTGTTTGTTCAGAATGGG+TGG | 0.644773 | 1.1:-78313488 | MS.gene76300:CDS |
| AAGAACATAGAATTTGAACA+AGG | 0.652634 | 1.1:+78314110 | None:intergenic |
| GTTGTTAGAACACATAAAGG+AGG | 0.674114 | 1.1:-78313401 | MS.gene76300:CDS |
| CCAACCATGGAATCAGCAAG+AGG | 0.689762 | 1.1:-78313839 | MS.gene76300:CDS |
| GGGACACGACATGTAACAGG+TGG | 0.708255 | 1.1:+78314004 | None:intergenic |
| TGAAACAAGCATAGTCAACG+AGG | 0.745187 | 1.1:+78314029 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATCAAATATAACAACAAT+GGG | - | chr1.1:78313847-78313866 | MS.gene76300:CDS | 15.0% |
| !! | TAAATCAAATATAACAACAA+TGG | - | chr1.1:78313846-78313865 | MS.gene76300:CDS | 15.0% |
| !! | TAATGTGATTAACAAGATAT+TGG | + | chr1.1:78312892-78312911 | None:intergenic | 20.0% |
| !!! | TGTTTAAAATCAGGAATATA+TGG | + | chr1.1:78313955-78313974 | None:intergenic | 20.0% |
| ! | AAGAACATAGAATTTGAACA+AGG | + | chr1.1:78313015-78313034 | None:intergenic | 25.0% |
| ! | ACCTAAACGTATTAATTCAA+TGG | + | chr1.1:78312951-78312970 | None:intergenic | 25.0% |
| ! | ATCAAAAGTTTCAATCTTTC+TGG | - | chr1.1:78313466-78313485 | MS.gene76300:CDS | 25.0% |
| ! | ATCACTTCAAAAAGATCTTA+TGG | - | chr1.1:78313804-78313823 | MS.gene76300:CDS | 25.0% |
| ! | CTTAACTACATTGAATCAAA+AGG | - | chr1.1:78314126-78314145 | MS.gene76300:CDS | 25.0% |
| ! | GAATATATGGTTTCCATTTA+GGG | + | chr1.1:78313942-78313961 | None:intergenic | 25.0% |
| ! | TCCATTGAATTAATACGTTT+AGG | - | chr1.1:78312947-78312966 | MS.gene76300:CDS | 25.0% |
| !! | GATTCTTTGTTTGAAAAAAC+CGG | - | chr1.1:78313337-78313356 | MS.gene76300:CDS | 25.0% |
| !! | TCAAAAGCTTGTTTAAAATC+AGG | + | chr1.1:78313964-78313983 | None:intergenic | 25.0% |
| !! | TTTTGACATGAAATAAACAG+TGG | + | chr1.1:78313059-78313078 | None:intergenic | 25.0% |
| !!! | CACTTTTTGGATTGTTTTTA+AGG | + | chr1.1:78313177-78313196 | None:intergenic | 25.0% |
| !!! | TTTTTCAAACAAAGAATCCA+TGG | + | chr1.1:78313335-78313354 | None:intergenic | 25.0% |
| AAGCTCAAATATGTCAAACT+TGG | - | chr1.1:78312863-78312882 | MS.gene76300:CDS | 30.0% | |
| ACAATTTCAGGAATATGAAC+TGG | + | chr1.1:78314288-78314307 | None:intergenic | 30.0% | |
| ACCAAATTGTTTGTTCAGAA+TGG | - | chr1.1:78313630-78313649 | MS.gene76300:CDS | 30.0% | |
| ACTACATTGAATCAAAAGGT+AGG | - | chr1.1:78314130-78314149 | MS.gene76300:CDS | 30.0% | |
| ACTCTTATTCCAATCATGAT+TGG | - | chr1.1:78312920-78312939 | MS.gene76300:CDS | 30.0% | |
| ATAACACCAAACTATTACCA+AGG | - | chr1.1:78313586-78313605 | MS.gene76300:CDS | 30.0% | |
| ATACATCTTCATCATCACTA+TGG | - | chr1.1:78314097-78314116 | MS.gene76300:CDS | 30.0% | |
| CAAACAATTTGGTAAAAGCA+TGG | + | chr1.1:78313623-78313642 | None:intergenic | 30.0% | |
| CAAAGATTGAGGATTTCATT+TGG | + | chr1.1:78312974-78312993 | None:intergenic | 30.0% | |
| CAAATGAAATCCTCAATCTT+TGG | - | chr1.1:78312972-78312991 | MS.gene76300:CDS | 30.0% | |
| CAATTTCAGGAATATGAACT+GGG | + | chr1.1:78314287-78314306 | None:intergenic | 30.0% | |
| CATGTTGTTAGAACACATAA+AGG | - | chr1.1:78313718-78313737 | MS.gene76300:CDS | 30.0% | |
| CCAAATTGTTTGTTCAGAAT+GGG | - | chr1.1:78313631-78313650 | MS.gene76300:CDS | 30.0% | |
| GAAAAATCTTCAACCCTAAA+TGG | - | chr1.1:78313926-78313945 | MS.gene76300:CDS | 30.0% | |
| GGAATATAATGAATTGAAGG+TGG | + | chr1.1:78313256-78313275 | None:intergenic | 30.0% | |
| GGAATATATGGTTTCCATTT+AGG | + | chr1.1:78313943-78313962 | None:intergenic | 30.0% | |
| GGTGGAATATAATGAATTGA+AGG | + | chr1.1:78313259-78313278 | None:intergenic | 30.0% | |
| TCAATTATCTACTGAACATG+TGG | - | chr1.1:78314041-78314060 | MS.gene76300:CDS | 30.0% | |
| TTTGAAGAAGAAGACAAAGA+AGG | - | chr1.1:78313769-78313788 | MS.gene76300:CDS | 30.0% | |
| ! | AAGTTTCAATCTTTCTGGAA+TGG | - | chr1.1:78313471-78313490 | MS.gene76300:CDS | 30.0% |
| ! | ATGAGTATGTCTATGTCTTT+TGG | + | chr1.1:78313370-78313389 | None:intergenic | 30.0% |
| ! | GAACATTTTTGTATACATGC+TGG | - | chr1.1:78313982-78314001 | MS.gene76300:CDS | 30.0% |
| ! | TCATTTCCTTGGTAATAGTT+TGG | + | chr1.1:78313595-78313614 | None:intergenic | 30.0% |
| ! | TTAAATGCAATAGTGCTGTT+TGG | - | chr1.1:78314199-78314218 | MS.gene76300:CDS | 30.0% |
| !! | AGTTTCAATCTTTCTGGAAT+GGG | - | chr1.1:78313472-78313491 | MS.gene76300:CDS | 30.0% |
| !! | ATTTGAAACTCGACACTTTT+TGG | + | chr1.1:78313190-78313209 | None:intergenic | 30.0% |
| !!! | TATGTCTTTTGGTTTAAGAC+CGG | + | chr1.1:78313359-78313378 | None:intergenic | 30.0% |
| AAAGATCTTATGGCAATTGC+AGG | - | chr1.1:78313814-78313833 | MS.gene76300:CDS | 35.0% | |
| AATTGTTTGTTCAGAATGGG+TGG | - | chr1.1:78313634-78313653 | MS.gene76300:CDS | 35.0% | |
| ACAACAACAGCGTTTGAATT+TGG | + | chr1.1:78313553-78313572 | None:intergenic | 35.0% | |
| AGCATTAAGACACCTATTGA+TGG | - | chr1.1:78314234-78314253 | MS.gene76300:CDS | 35.0% | |
| ATGGAAACACCAATCATGAT+TGG | + | chr1.1:78312932-78312951 | None:intergenic | 35.0% | |
| CAGTGGCTATAAAAATGACA+AGG | + | chr1.1:78313042-78313061 | None:intergenic | 35.0% | |
| CCCATTCTGAACAAACAATT+TGG | + | chr1.1:78313634-78313653 | None:intergenic | 35.0% | |
| GAAGACAAAGAAGGTAAAGT+TGG | - | chr1.1:78313778-78313797 | MS.gene76300:CDS | 35.0% | |
| GTTCCATGAAAGTAGCAAAA+GGG | + | chr1.1:78313141-78313160 | None:intergenic | 35.0% | |
| GTTGTTAGAACACATAAAGG+AGG | - | chr1.1:78313721-78313740 | MS.gene76300:CDS | 35.0% | |
| TCAAAAGGTAGGATGAAGAA+AGG | - | chr1.1:78314141-78314160 | MS.gene76300:CDS | 35.0% | |
| TGTTCCATGAAAGTAGCAAA+AGG | + | chr1.1:78313142-78313161 | None:intergenic | 35.0% | |
| TTAACTGAGCTAGAGAAATC+AGG | + | chr1.1:78312845-78312864 | None:intergenic | 35.0% | |
| TTAGTGAGTTCCAAAGATTG+AGG | + | chr1.1:78312985-78313004 | None:intergenic | 35.0% | |
| ! | CATTTTTGTATACATGCTGG+TGG | - | chr1.1:78313985-78314004 | MS.gene76300:CDS | 35.0% |
| ! | CTTTTTCTCATCACACTCAT+TGG | - | chr1.1:78313901-78313920 | MS.gene76300:CDS | 35.0% |
| !! | AAAAGTAACTGTTCTGAAGC+TGG | + | chr1.1:78313886-78313905 | None:intergenic | 35.0% |
| !! | AAAGTGTCGAGTTTCAAATG+AGG | - | chr1.1:78313191-78313210 | MS.gene76300:CDS | 35.0% |
| !! | GTTTCAATCTTTCTGGAATG+GGG | - | chr1.1:78313473-78313492 | MS.gene76300:CDS | 35.0% |
| !!! | ACTTGTTATTTTCTCAGCCA+TGG | - | chr1.1:78313315-78313334 | MS.gene76300:CDS | 35.0% |
| AACACCTTCTTTGTCTGCTA+TGG | - | chr1.1:78313414-78313433 | MS.gene76300:CDS | 40.0% | |
| AGGATGACACTTCATAGGTT+TGG | - | chr1.1:78314072-78314091 | MS.gene76300:CDS | 40.0% | |
| ATCACCATAGCAGACAAAGA+AGG | + | chr1.1:78313421-78313440 | None:intergenic | 40.0% | |
| ATGAGGATTCTTGAACGTTC+TGG | - | chr1.1:78313208-78313227 | MS.gene76300:CDS | 40.0% | |
| ATTCTTGAACGTTCTGGTCT+TGG | - | chr1.1:78313214-78313233 | MS.gene76300:CDS | 40.0% | |
| CATCAAGGATGACACTTCAT+AGG | - | chr1.1:78314067-78314086 | MS.gene76300:CDS | 40.0% | |
| CTAGAGAAATCAGGCAAGAT+TGG | + | chr1.1:78312836-78312855 | None:intergenic | 40.0% | |
| TAGGATGAAGAAAGGAGACA+GGG | - | chr1.1:78314149-78314168 | MS.gene76300:CDS | 40.0% | |
| TATTCCACCAAAACCAACCA+TGG | - | chr1.1:78313270-78313289 | MS.gene76300:CDS | 40.0% | |
| TGAAACAAGCATAGTCAACG+AGG | + | chr1.1:78313096-78313115 | None:intergenic | 40.0% | |
| ! | ATAGCAGACAAAGAAGGTGT+TGG | + | chr1.1:78313415-78313434 | None:intergenic | 40.0% |
| ! | TCTGAAGCTGGTAAAACAAG+AGG | + | chr1.1:78313874-78313893 | None:intergenic | 40.0% |
| !!! | TGTCCCTTTTGCTACTTTCA+TGG | - | chr1.1:78313135-78313154 | MS.gene76300:CDS | 40.0% |
| AAAGGGACACGACATGTAAC+AGG | + | chr1.1:78313124-78313143 | None:intergenic | 45.0% | |
| AGGGTATGGCAGATAGCATT+TGG | - | chr1.1:78314168-78314187 | MS.gene76300:CDS | 45.0% | |
| CGATCAATGCAATCTGTCCA+AGG | + | chr1.1:78314261-78314280 | None:intergenic | 45.0% | |
| GAGAAATCAGGCAAGATTGG+AGG | + | chr1.1:78312833-78312852 | None:intergenic | 45.0% | |
| GCATGGCTCTTTCATTTCCT+TGG | + | chr1.1:78313606-78313625 | None:intergenic | 45.0% | |
| GTAGGATGAAGAAAGGAGAC+AGG | - | chr1.1:78314148-78314167 | MS.gene76300:CDS | 45.0% | |
| TCTGTCCAAGGTCCATCAAT+AGG | + | chr1.1:78314249-78314268 | None:intergenic | 45.0% | |
| TGAAGAAAGGAGACAGGGTA+TGG | - | chr1.1:78314154-78314173 | MS.gene76300:CDS | 45.0% | |
| ! | AGACACCTATTGATGGACCT+TGG | - | chr1.1:78314241-78314260 | MS.gene76300:CDS | 45.0% |
| !! | CTGAACATGTGGAAGCATCA+AGG | - | chr1.1:78314052-78314071 | MS.gene76300:CDS | 45.0% |
| !! | TTCACCTCTTGCTGATTCCA+TGG | + | chr1.1:78313290-78313309 | None:intergenic | 45.0% |
| !!! | GATTCCATGGTTGGTTTTGG+TGG | + | chr1.1:78313277-78313296 | None:intergenic | 45.0% |
| !!! | GCTGATTCCATGGTTGGTTT+TGG | + | chr1.1:78313280-78313299 | None:intergenic | 45.0% |
| CCAACCATGGAATCAGCAAG+AGG | - | chr1.1:78313283-78313302 | MS.gene76300:CDS | 50.0% | |
| TCAACGAGGTAGATTGTGCG+TGG | + | chr1.1:78313082-78313101 | None:intergenic | 50.0% | |
| TGGCAGATAGCATTTGGCAG+TGG | - | chr1.1:78314174-78314193 | MS.gene76300:CDS | 50.0% | |
| !! | CCTCTTGCTGATTCCATGGT+TGG | + | chr1.1:78313286-78313305 | None:intergenic | 50.0% |
| GGGACACGACATGTAACAGG+TGG | + | chr1.1:78313121-78313140 | None:intergenic | 55.0% | |
| ! | TCTGGAATGGGGTGTAGTGC+TGG | - | chr1.1:78313484-78313503 | MS.gene76300:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 78312827 | 78314317 | 78312827 | ID=MS.gene76300 |
| chr1.1 | mRNA | 78312827 | 78314317 | 78312827 | ID=MS.gene76300.t1;Parent=MS.gene76300 |
| chr1.1 | exon | 78312827 | 78314317 | 78312827 | ID=MS.gene76300.t1.exon1;Parent=MS.gene76300.t1 |
| chr1.1 | CDS | 78312827 | 78314317 | 78312827 | ID=cds.MS.gene76300.t1;Parent=MS.gene76300.t1 |
| Gene Sequence |
| Protein sequence |
